Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F2 I0 R1
|
122 |
5985.5 |
7364544 |
98.3% |
7239346 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
19.0% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 19.0%
| 169.0
/ 6.5
| 131 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (24/70); new base A (21/9); total (51/80) |
| Fisher's exact test for biased strand distribution p-value = 2.02e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 131 total aligned reads displayed.
CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056825‑4057095
|
caggcagCCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGG‑TTTTAACGGTTAATTGaa > 7:323023/1‑140 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAAt < 3:847738/140‑1 (MQ=255)
gcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATAACGTTAAATTAAATcc > 1:145782/1‑140 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTTTAACGTTTAATTAAAtac > 5:115802/1‑136 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATccgcc < 5:198685/138‑1 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTTTAACGTTAAATTCAATACGCCGAAATTa > 1:730093/1‑140 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTAACGCGCCGTCTGGTCGTGG‑TTTTAACGTTAAATTAAATCCGCCGaaatt > 6:64146/1‑136 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTAAATCCCCCGAAAGTa > 6:459643/1‑138 (MQ=255)
taagGGGGAATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTTATTGTTGACGGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAATTTCAATCCGCCTAAAGTAGaa < 6:280942/137‑1 (MQ=255)
cGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCaaa < 2:45065/140‑1 (MQ=255)
ggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATACCGGTAAATTAAATACGCCGAAATTAGAATGCaaa > 5:393002/1‑138 (MQ=255)
gaaTCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTGGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAacac < 8:218636/138‑1 (MQ=255)
aaTGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGt < 8:718642/140‑1 (MQ=255)
gttgttTACGTTCTGGAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCTTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAATTTAGAAGGCAAAGACGACGTTAc < 7:74789/140‑1 (MQ=255)
tGATTACGTTCTGGATTTCTACGTACCGGACGAACTCATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACTTAAAATTCAAACCGCCGAAAGTAGAAGGAAAAGACGACGTTAc < 6:705942/138‑1 (MQ=255)
tGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑TTTTCACGTTAAAATAAAACCGCCGAAAGTAGAACGCAAAGACGCCGTTAccc > 1:526695/1‑139 (MQ=255)
tGATTACGTTCAGTAATTCGACGACCCGTACGAACTGATGGTTGACCGTCTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCg < 8:524370/140‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCAAGCGCCGTCTGGTCGTGT‑TTTTGAAGTTAAATTAAATCGCCCGAAATTAGAAGGGAAAGACGACGTTACCggg > 3:187668/1‑139 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCGAGTTAAATTAAATCCGCCGAAAGGAGAAGGCCAAGACGACGTTACCGGTga > 1:731310/1‑140 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTAAATACGCCGAAAGTAGAAGGCCAAGACGACGTTACCGGTga > 3:211183/1‑140 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTAACGCGCCGTCTGGAAGTGG‑TTAAAACGGTTAATTCAATACCACGAAATTATAAGGGAAAGACGAACGTAACGGTga > 1:834911/1‑140 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATAAAGTTTAATTAAATCCGCCGAAAGTTGAAGGCAAAGACGACGTTAACGGTgaaga > 1:451467/1‑140 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑TTTTGCCGTTAAAATAAATCCGCCGAAAGTTGAAGGCAAAGACCCCCTTTACGGTgaaga > 7:159760/1‑140 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑TTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGAAGACGGTACCGGTgaaga > 2:446794/1‑140 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACCTTAAATTCAATCCGCCGAAAGTATAATGCAAAGACGACGTTACCGGTgaagaaa > 4:834060/1‑139 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑TTATAAAGTTTTATTCAATACGCCGAAAGTATAAGGAAAAGAACACGTTACCCGTgaagaaa > 3:612519/1‑139 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑GTATCACGTTAAATTCAATAAGCCGAAAGTAGAAGGCAAAGAAGACGTTTACGGTgaaga > 6:813203/1‑138 (MQ=255)
tGGAATTATACGTACCGGACGAAATGAGTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGT‑TTATAAAGTTAAATTCAATCCTCCGAAAGTATTAGGCAAATAAGCACTTAACTGTGAAGAACTg > 8:351877/1‑140 (MQ=255)
gAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 7:166283/140‑1 (MQ=255)
aaTTCGAGGTCCCGGACGAACTGATTTTTGACCGTATCTTAGGCCGCCGCGTTCAGGCGAAGTTTGGTCGTGT‑TTATAACGTTAAATTAAATCCGCAGACATTATAATGCAAAGACGACGTTACCGGTGAAGAACTGACt < 7:746375/140‑1 (MQ=255)
aaTGCGACGTACCGGACGAACTGATTGTTGACCGTATCGTTGGCCGCCGCGTTCACGCGCCGTCTGGTAGTGT‑TTATCAGGTTAAATTAAATCGGGCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 4:264019/140‑1 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTTTCACGTTAAAATAAATACGACGAAAGTAGAATGCAAAGCAGACGTTAACGGGGAAGAACTTACGAccc > 3:69686/1‑140 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑TTATAGCGTTAAATTCAATCCGCCCAAAGTAGAAGGCAAAGACGACGTTAACGGTGAATAACTGACTAccc > 1:703793/1‑140 (MQ=255)
gACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGT‑TTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTAcc < 6:275878/138‑1 (MQ=255)
aCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGG‑TTATCACGTTAAATTCAATCCGCCCAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACGGAATAccc > 6:544665/1‑138 (MQ=255)
gaaCCGGACCAACTGATTGTTGACCGTATCTTAGGCCGCCGCGTACACGCGCCGTCTGGTCGTGT‑TTAACATGTTAAATTAAATCCTCCGAATCTAGAAGGAAATGACGACGTTACCGGTGAAGAACTGACTACCCGt < 6:146190/136‑1 (MQ=255)
aCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTTTGACCTTAAATTTAATACGCCGAAAGTAGAACGCAAATACGCAGTTTACGGTGTAGAACTGAAGAccccgaaaa > 1:358980/1‑134 (MQ=255)
aCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGGTAAATTAAATCCGCCGCAAGTAGAAGGCAAAGACGACCTTAACGGTGAATCACTGACTAccccgaaat > 1:540974/1‑134 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGGGT‑TTATCACGTTAAATTCAAACCGCCGAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 8:409890/140‑1 (MQ=255)
gtactaaCTGATTGTGGACCTTTTGGTAGGCCGCAGCGTTCACGGGCGGTGTGGTCGGTT‑TTATCACGTTAAATTAAAGCCGCCGAAAGTCGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTACAGACg < 8:30639/135‑1 (MQ=255)
gACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATGACGGTTAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACAGTCTACCCGTAAACACGa > 2:121811/1‑140 (MQ=255)
cctaaCTTATTGTTGACCGTATCGTCGGCCGCGGCGTTCACGCGCCGTCGGGTCGTGT‑TTATCAGGTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:618049/137‑1 (MQ=255)
ccGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTAAATCCGCCTAAAGTAGAAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:824643/139‑1 (MQ=255)
ccGAACTGATGGGTGACCGTTGCGAAGGCCGCCGCGGGCCCGCGCCGGCTGGTCGTGT‑TTATCCCGTAAATATCAATCCGCCTAAATTAGACGGCAACCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 5:700674/137‑1 (MQ=255)
aggAAATGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGT‑TTATCAGTTTAATTTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:604419/138‑1 (MQ=255)
actaaCTGTTTGTTGACCGTATCGTTGGCCGCCGGTTTCACGGGCTGTCTGGTCTGTT‑TTATAACTTTAAATTCAATCCGCCGAATGTCGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 8:715073/137‑1 (MQ=255)
aCGAACTGATTGTTGACCTTATCGTTGGCCGCCGCGGTACCGCGCCGTCTTGTCGTGT‑TTATCACGTTAAATTCAAACCGCCGAAAGTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 8:526248/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 6:370331/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGACGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:407502/140‑1 (MQ=255)
aCGAAATGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTTTGGTGGTGT‑TTATCACGTTAAATTCATTCCGCCTAAAGTATAAGCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:891741/140‑1 (MQ=255)
tttgttgACCTTATCGTTGGCCGCGGCGTTCACGCGCCGTCTGGTCGTTT‑TTATCACTTTAAATTCATACCGCCCAAAGAAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 5:64146/137‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 8:706444/140‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTTAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 1:363111/140‑1 (MQ=255)
tttaCCGTATCGTGTGCAGCCGCGTGCACGCGCCGTCTGGTCTTGT‑TTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 6:782377/135‑1 (MQ=255)
ttgACCTTTTGGTAGGCCGCGGCGTGCCGGCGCCGTTGGGGCGTGT‑TTATCAGGTTAAATTCAATCGGCCTAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 2:108852/140‑1 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 5:710805/138‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑TTATCACGTTAAATTAAATACGCCGAAAGTTGAAGGCCAAGACGCCGTTAACCGTGAAGGACTGACAACCCGTAAAGACGATCAGGAAGAGAccct > 3:808179/1‑138 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAAACCGCCGAAAGTATAAGGCAAAGACGCCGTTACCGGTGCAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt > 6:317661/1‑138 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGT‑TTATCAAGTTAAATTAAATCCGCCGAAAGTATAAGGACAAGACGAAGTTACCGGTGAAGAACAGACTACCCGTAAAGACGATCAGGAAGAGACcgt > 6:532381/1‑138 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGG‑TTTTCACTTTAAATTAAATCCGCCCAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAAATTACTACCCGTAAAGCCGATCAGGAAGAGCCcgtacgt > 2:13089/1‑140 (MQ=255)
tATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCTGGT‑TTATCACGTTAAATTCAATCCGCCGAAATTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgta < 3:144354/140‑1 (MQ=255)
tATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgta < 4:639856/140‑1 (MQ=255)
tggCCGCCGCGTTCCCGCGCCGGTTGGTCTGGT‑TTATCACGTTAAATTCAATCCGCCGAAAGAACATGCCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 7:556846/139‑1 (MQ=255)
tggCCGCCGCGTTCAGGCGCCGTCTGTTGGTGT‑TTATCACGTTAAATTCAATCCGCGGAATGTATACTGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 1:251722/139‑1 (MQ=255)
cggCCTCCGGTTTCACGCGCCGTCTGGTCGTTT‑TTAACACGTTAAATTAAATCCGCCGAAATTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 6:70498/137‑1 (MQ=255)
cggCCGCCGGGTGCACGCGCGGTGTGGTCTGGT‑TTATCAGGTTAAATTCACACCGCCGATAGTAGACGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 3:658129/139‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCTAATGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:11405/139‑1 (MQ=255)
cggCCCCCGCGTTCACGCGCCGGCTGGTGGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 6:448075/137‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:254247/140‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCTGATGGTCGTGT‑TTATCACTTTAAATTCAATCCGCCGAAATTAGAACGCAAAGACGACGTTACCGGTGTAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 7:791926/140‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 1:589805/140‑1 (MQ=255)
ggCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGGTAAATTCAATAAGCCGCAAGTAGAAGGCAAACCCGACGTTACCCGTGTAGAACTGCCTACCCGTAAAGACGAACAGGAAGAGGAGGTACGTAAACGTcg > 8:353301/1‑139 (MQ=255)
ccgccgCGTGCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCTAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTgg < 4:381325/140‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGAAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGt < 2:625103/140‑1 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGCAAGTAGAAGGCAAAGACGCCGTTACCGGTGAAGAACTGACGACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGttt > 8:596105/1‑139 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTGAATCCGCCGAAAGTAGAAGGGAAAGACGACGTTACCGGTGAAGCACTGCCTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa > 8:423359/1‑140 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTTT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGTACGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 8:242468/140‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg > 6:520397/1‑138 (MQ=255)
ggtgaccgcgcgGGCGGGTCGGTT‑TTTTCACGTTAATTAGAATACTCGGAAAGTAGATGGCTAAGACGACGTTACCGTTTAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAACGTAAGTAAACGTCTGGTTGa < 6:80143/132‑1 (MQ=255)
ctttCACGCGGCGTGTGGGCGTGT‑TTATCACGTTAAATTCAACCCTCCCAAAGTAGAAGGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 2:914375/138‑1 (MQ=255)
cgTTCACGCGCCGTCTGGGGGTGT‑TTATCACGTTAAATTCAATCCCCCCAAAGTAGAAGGCAACCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 5:352962/138‑1 (MQ=255)
cgTCCACGGGCCTTCTGGAC‑TGTGTTATCACGTTAAATTCAATCCCCCTAACGTACACCGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 6:862692/138‑1 (MQ=255)
tgcACGCGCCGTCGGGTCGTGT‑TTATCACTTTAAATTCAATCCGCCCAAAGTAGACGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 3:145988/138‑1 (MQ=255)
gtCACGCGCCGTCTGGGCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 8:379225/139‑1 (MQ=255)
gcgcCGTCTGGTGGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 3:564348/140‑1 (MQ=255)
gcgcCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 4:614763/140‑1 (MQ=255)
gcgcCGTCTGGTCGTGT‑TTATCACGTTAAATTCAAGCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 8:437185/140‑1 (MQ=255)
gcgcCGTCTGGGCGTGT‑TTATCCCGTTAAATACAATCCGCCGAAAGTCGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 4:317651/140‑1 (MQ=255)
ccGTCGGGTCGGGT‑TTATCACGTTAAATTAACTCGGCCTAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 7:152095/140‑1 (MQ=255)
cagTCTGGGCGTGG‑TTATCAGGGTAAATTCAATCCCCCTAAATTAGACGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACTTCTGGTTGAATACCATCAGAt < 4:94988/138‑1 (MQ=255)
tGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACCTTACCGGTTAAGAACATACTACCCGTTAAGACGATCAGGAAGAGACCGTACGTAAAAGTCTGGTTGAATAAAATCAGATgcatt > 8:205110/1‑136 (MQ=255)
gTCGGGT‑TTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGCAAAACACGACGTTACCGTTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCa < 1:393552/140‑1 (MQ=255)
gcttgt‑TTATCAAGTTAAATTCAATCCGCCGAACTTAGAAGGAAACGACGCCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 1:452290/137‑1 (MQ=255)
tggttATCACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCCGAAAGACGATCAGGAAGAGCCCGTACGTAAACCTCTGGTTGAATACCATCAGAATACTGCAcccc > 2:788103/4‑138 (MQ=255)
t‑ttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCCTAAGTAAACCTCTGGTTGAATACCATCAGAATACTGCACCGCTg > 2:614634/1‑140 (MQ=255)
ttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 4:544703/140‑1 (MQ=255)
taaCGTTAAATTAAATACGCCGAAAATTTAAGGCAAAGACGACGTTACCGGTGAAGAACAGACAACCCGTAAAGACGATCAGGAAGAAACCGTACGTAAAAGTCTGGTTGAATACAATCAGATGAATGCAACGCTGAtat > 4:83938/3‑138 (MQ=255)
cACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACAGACTACCCCTAAAGACGATCAGGAAGACACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCgg > 7:422246/1‑140 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGt < 4:842015/102‑1 (MQ=255)
aaTTCAAACCGCCGAAAGTAGAAGGCAAAGACTACGTTACCGGTGAAGCACTGACTACCAGTAAAGACGATCAGGAAGAGACCGTCCGTAAACGTCTGGTTGAATACAATCAGATGACTGCACCGCTGATCGGctacg > 6:134387/1‑137 (MQ=255)
|
CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGT‑TTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056825‑4057095
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
