Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
20.4% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 20.4%
| 208.4
/ 10.5
| 148 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (24/85); new base A (26/11); total (52/96) |
| Fisher's exact test for biased strand distribution p-value = 2.13e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 149 total aligned reads displayed.
CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056825‑4057095
|
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAAGTTAAATTCaa > 3:738309/1‑140 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGTCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 4:878876/140‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCa < 6:46211/138‑1 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAAGTTTAATTaaaacagc > 3:142004/1‑135 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTGACGGTAAATTCAATcc > 5:394833/1‑138 (MQ=255)
gACGCGAAGAAAGAAGCGGGCATCAATGTTGATTACGTTGTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGTTTATCACGTTAAATTCAATccgcc < 4:86439/140‑1 (MQ=255)
aCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGGTTTTGACGTTAAATTAAATccgccg > 2:587861/1‑140 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTATGCCGCCGCGTTCCCGCGCCGTCTGGTGGTGGTTTTCACGGTATAATGAATAAGCCGAAATTa > 3:202954/1‑140 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATACGCCGTACCGTACGACCTGATTGTTGACCGTATCGTAGGGCGCCGCGTTCACGCGCCGGCTGGGCGTGTTTATCACGGTATATTCTATCCGCCGAAAGTa < 7:634678/140‑1 (MQ=255)
taaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGt < 5:658578/137‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 7:381218/140‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 7:240505/140‑1 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACGGATTGTTGACCGTATCGTAGGCCCCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTTACGTTAAAATAAAAACGCCCaaacga > 6:814021/1‑135 (MQ=255)
gaagCGGGAATCATGGTTGATTACGTTCTGTATTTAGACGTTCCGGACTAAGTGATTGTTGACCGTATCTTAGGCCGCCGCTTTCACGCGCGGTCTGGTCTTGTTTATCACGTTAAATTCAATCCGCCGAACGTAGAAgg < 8:93018/140‑1 (MQ=255)
cGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAAATCAATACGCCGAAATTAGAATGaaaa > 4:493481/1‑140 (MQ=255)
aTCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAAAACGCCGAAAGTAGAAGGCAAacac > 6:269737/1‑138 (MQ=255)
aaTGTTGATTCCGTGCTGTAATTCGACGAACCGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGt < 2:403997/140‑1 (MQ=255)
aaTGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACTTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGt < 3:288540/140‑1 (MQ=255)
tGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGCCGACGTTa > 8:86226/1‑140 (MQ=255)
gTTTATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTAc < 8:428739/140‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCAAGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTAc < 4:63222/140‑1 (MQ=255)
tGATAACGTTGTGTAATTCGACGTACCTGACGAACTTATTGTTGACCGTATGGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCTTGTTTATCACGTTAAATTCAATCCGCCTAAATTAGAAGGCAAAGACGACGTTAc < 5:857520/138‑1 (MQ=255)
agtACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTGTATCCCGGTAAATTCACTCCGCCGAAAATAGAAGGCAAAGACGACGTGACCggg > 2:353125/3‑139 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGTTTTTCACGTTAAATTCAATACGCCGAAAGAAGAAGGCAAAGACGACGTTaaccgt > 2:347509/1‑135 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTAAATACTCCAAAAATAGAAGGCAAAGACGAAGATACAGGt > 2:347504/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACCTTTAATTAAATCCGCCGAAAATAGAAGGCAAAGACGACGTTAcccgg > 2:3717/1‑137 (MQ=255)
ttACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAAATAAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCgg > 5:765998/1‑138 (MQ=255)
tgaCGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTg < 2:865640/138‑1 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGACGCCGCCTTCACTCGCCGTCTGGTCGTGTTTATAACGTTTAAATAAAAACGCCGAAAGGAGAAGGCAAAGACCCCGTTAACggg > 5:508252/1‑137 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTgaaga > 2:873976/1‑140 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATACGCCGAAATTAGAAGGGAAAGACGACGTTTCCGGGgaagaaa > 1:243411/1‑139 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAAGTTTAATTAAATCCGCCGAAATTATAAGGCAAAGACGACGTTACCGGGGAAAAAc > 2:164488/1‑140 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTAAAGGTAAAATAAAAACGCCCCAAATAGAAAGCAAAAAAACCGGTTCCCGTgaagaaa > 1:383974/1‑139 (MQ=255)
taaTTCGACTTACCGGACGAACTGATTGTTGACCGTATCGTCGGCCGCCGGGTTCACGCGCGGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 2:410179/139‑1 (MQ=255)
gAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTGTATGACGGTAAATTGAATGCGACGAAAGTATAAGGCAAAGACAACGTTAACGGTgaagaaaaggc > 8:370292/1‑135 (MQ=255)
gAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAAAGGTAAAATAAATACGCCGAAAGTTGAATGCAAAAACCACATTACCCGTGAAAAAcag > 5:1099218/1‑136 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 1:873976/140‑1 (MQ=255)
cGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCCCGTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTa < 3:667993/140‑1 (MQ=255)
cctgtggAACTGTTTTTTGATCGTATCGTTGGGCGCCGATTTCCGGCGCGGTCTGGTGGTGTTTATCTCTTTAAATGAAATCCTCCGAATGTATAAGGCAAAGTAGACGTTACAGGTGAAGAACTGACTACCCGTAAAGa < 4:116791/134‑1 (MQ=255)
ccGGACTAATTGATTTTTGACCGTATTGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 6:60574/138‑1 (MQ=255)
ccGGACTAACTTATTGTTGACCGTATCGTAGGCCGACGCGTGCACGGGCCGTCTGGTCTTGTTTATAACTTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 2:146749/140‑1 (MQ=255)
ggACGAACTGATTTTTGTCGGTTTCGTTGGCCGCGGTGTGCACGCGCTGTCTGGTGGTGTTTTTACCGTTAAATTCAATCCGCCTAAAGTATCAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:27027/140‑1 (MQ=255)
cctaaCTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTGTGGTGGTGTTTATCCGTTTAAATTCAATCCGCCGAAAGTAGACGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 7:849847/137‑1 (MQ=255)
actaaCTTATTGTTTACCGTATCGTAGGCCGCCGGGTTCAGGGGCCGTGTGGTCGTGTTTTTCACGTTAAATTCAATCCGCAGAAAGTAGATGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:481482/137‑1 (MQ=255)
actaaCTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTAAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 8:1077844/137‑1 (MQ=255)
actaaCTGTTTGTTGACCGTATGGTAGGCCGCCGCTTTCAGGCGCCGTCTGGTCTTGTTTATAAGTTTAATTTCAATCCGCCGAAAGTTGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:1163772/137‑1 (MQ=255)
actaaCTGTTTGTTGACAGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTCGTGTTTATCTCGTTAATTAAAATCCGCCCAATGAAGAATGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 5:8247/135‑1 (MQ=255)
actaaCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:61390/137‑1 (MQ=255)
aCGAATTGATTGTTGACCGTATCGTAGGCGGCCGCGTGCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAACGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 6:321264/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:738309/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATAGTAGGCCGCCTGGTTCAGGCGCCGTGTGGTCGTGTTTTTAACGTTAAATTCAATCCTCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 8:255711/140‑1 (MQ=255)
ttgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTTGTCGTGTTTATCACGTTAAATTAAATACGCCGAAAGTATAAGGCAAAGACGACGTTACCGGGGAAGAACTGCAGACCCGGAAAGACGATCAGGAag > 6:197402/1‑138 (MQ=255)
tttttaCCGTATCGTCGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCTCCGAAATTTGACGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 4:299436/135‑1 (MQ=255)
tgttgCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 6:42024/138‑1 (MQ=255)
tgttgACCGTATCTTTGGCCGCCGCGTTCAGGCGCCGTCTGGTCTTGTTTTTCACGTTAATTTCAATCCGCAGAATGTCTACGGAAATTACGACGTTACCGGTGAAGAACTGACTAACCGTAAAGACGATCAGGATgaga < 8:274782/140‑1 (MQ=255)
tgttgACCGTATCTTCGGCCGCCGCGTTCACGCGCCGTGTGGTGGTGTTTATCACGTTAAATTCATTCCGCCTAAAGTAGATGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 4:1040203/140‑1 (MQ=255)
ttgACCTTAGCGGAGGCCGCCGCGTTCACGGGCGGTCTGTTCGTGTTTATCACGTTAAATAAAATCCGCATAAATTATACGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 7:694081/140‑1 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTAAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTAACCGTAAAGACGCTCAGGAAGAGAcc > 3:190468/1‑140 (MQ=255)
tgACGGTAGGGTAGGCCGCCGCGTTCACTCGCCGTCGGGGAGTTTTAATCACTTTAAATTCATACCGCCTAAAGTCTAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcg < 8:1053502/140‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 5:639326/138‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt > 4:966015/1‑126 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:966015/126‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACAGACTACCCGTAAAGACGATAAGGAAGAGACcgt > 2:288076/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATACGCCGAAAGTATAAGGCAAAGACGACGTTAACCGTGAAGAAATGACAACCCGTAAATACGATCAGGAAGAGACcga > 7:27732/1‑139 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAagatccccg > 8:460960/1‑134 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACCTTAAATTAAATCCCCCGAAACTAGAAGGCAAAGACGACGATACCGGTGAAGAACTGAAGACCCGTAAAGACGATCAGGAAGAGACcctacct > 2:608701/1‑138 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACCGTAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGAAGAACTGACTACCCGTAAAGACCATCAGGAATAGACcgtacgt > 7:103745/1‑140 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTCACGGTTAAATAAATACGCCGAAAGTAGAAGGCAAAGACCACGTTACCGGTGTAGAACTGACAACCCCTAAAGACGCTCCGGCAGAGccccgtcgt > 4:366578/1‑134 (MQ=255)
tATCGTAGGGCGCCGCGTTCACTCGCCGATTGTTCGTGTTTAGCTCGTTAATTTCTATCCGCCGAAAGTAGATGTCAAAGACGAAGTTACCGGTGATGAACTGACTACCCTTAAAGACGATAAGGAAGAGACcgtacgta < 8:365338/140‑1 (MQ=255)
tCGTAGGCCGCAGCGTTCACTCGCCGTCTGGTCGTGTTGTTAACGTTAAATTCAATGCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGGGAAGAACTTACTACCCGGAAAGAAGATCAGGAAGAGACcgtaagta > 6:417631/1‑138 (MQ=255)
aGGCCTCCCCGTTCCCGCGCCGTCGGGGCGGGTTTACCACTGAAAATTCAATCCGCCTAAAGTACAAGCCAACCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 6:813811/138‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 1:986476/140‑1 (MQ=255)
ggCCGCCGCGTTCACGCGCCGTCAGGTCGTGTGTATCACGTTAAATTCCATCCGCCGAAAGTAGTAGGCAAAGCCGACCTTACCGGTGAAGAACAGACTACCCGTAAAGACGAACAGGTAGAGACCGTACGGAAAccgct > 2:1141754/1‑136 (MQ=255)
ccgccgCGTTCCCGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAAACCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTgg < 2:778517/140‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTAAATACGCCGAAAATAGAAGGCAAAGAAGACGTTAACGGTGAAGAACAGACTACCCCTAAAGGCGATCAGGAATAGCCCGTACGTAAAAGTATg > 6:69512/1‑138 (MQ=255)
gcgTTCACGCGCCGTCTGGTGGTGTTTATCACGTTAATTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 7:53356/140‑1 (MQ=255)
gtttCACGCGCGGGCTGGTCGTGTTTATCACGTTAAATTCAAACCGCCCAAAGTAGAAGCCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 5:996614/136‑1 (MQ=255)
cggcgcCGTGTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAATGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 2:48725/138‑1 (MQ=255)
aCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 4:71781/140‑1 (MQ=255)
aCGCGCCGTCTGGTCGTGTTAATCACGTTAAATACAATCCGCCGAAAGTAGACGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 8:206364/140‑1 (MQ=255)
gggcCTTCGGGTCGTGTTTATCACTTTAATTTCAATCCGCAGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGATACCGTACGTAAACGTCTGGTTGAATACCAt < 6:533887/136‑1 (MQ=255)
gcgcCGTCTGGTCGTGTTTATAACGTTAAATTCAATCCGCCTAAAGAAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 8:19171/140‑1 (MQ=255)
gggttgggTCGTTTTTATCAGTTTAATTTAAATCCCCCGAATTTATACGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 1:164488/134‑1 (MQ=255)
cctgcgggTCGTGGTTATCACGTTAAAGTCAATCCGCCGAAAGTCGAAGCCAACGACGCCGTTCCCTGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 2:1079247/134‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCATGTTAAATTCAATCCTCCTAAAGTATACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 3:67313/140‑1 (MQ=255)
ccGGCTGGTCGTGTTAATCACGTAAACTTCAATCCGCCGAAAGTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 6:222279/138‑1 (MQ=255)
gggTCGTGTTTTTCACGTTAAATTCAATCCGCCGAAAGTATACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGAc < 5:854361/137‑1 (MQ=255)
gggtttttATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 7:620272/135‑1 (MQ=255)
gcGTGTTTATCATGTTAAATTCAATCCGCCGAAAGTAGAAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 1:958919/139‑1 (MQ=255)
tgtTTATCACGTTTAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGAAGAGACCGAACGTAAACGGCTGGTTGAATACCATCAGATGACGGCAcc > 6:765300/1‑138 (MQ=255)
tttATCAGGTTAAATTCAATCGTACGAAATTTGAAGGAAAATCCGAAGTTACCGGTTAATAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACTTAAACGTCTGGTTTAATACCATCAGATGACTGCACCGCTg < 3:106796/140‑1 (MQ=255)
ttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 4:402958/140‑1 (MQ=255)
tATCACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGTGAATAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTAGTGTTGAATACCATCAGATGACTGCACCGCTg > 6:572120/1‑138 (MQ=255)
cACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGAACgg > 2:294077/1‑140 (MQ=255)
ccttaaaaTCCAACCCCCCTAAAGTCCACGCCAACCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCg < 5:1074485/133‑1 (MQ=255)
ccGTTAATTTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGTTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 3:1063663/139‑1 (MQ=255)
tttAAATTCAATCCGCCTAAAGTTGACGTCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 6:145821/137‑1 (MQ=255)
tttAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 7:286606/139‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 3:762153/1‑140 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGCTCGGctact > 1:735672/1‑140 (MQ=255)
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CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056825‑4057095
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
