Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F2 I0 R1
|
252 |
7301.5 |
9636800 |
98.5% |
9492248 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
19.2% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 19.2%
| 254.2
/ 19.3
| 174 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (32/98); new base A (24/16); total (60/114) |
| Fisher's exact test for biased strand distribution p-value = 7.98e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 176 total aligned reads displayed.
GCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTA > NZ_CP022686/4056824‑4057096
|
gctggcagACGCTATGAAAGAAGCGGGCATCTATGTTGATTACGTTCTGGATTTCGACGTACCGGACGAACAGATTCTTGACCGTTTCGTATGCCGCCGCGCTCACGCGCCGTCTGGTCGTGTTTATCACGATAAATTCa < 5:1182002/137‑1 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTTTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTGAAATTCaa > 6:1086283/1‑140 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGGTTTTGACGTTAAATTCaa > 4:595064/1‑140 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCa < 1:189350/138‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 3:1105961/140‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 5:346515/140‑1 (MQ=255)
ggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTTACGTTAAATTCaa > 2:421346/1‑138 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTtaaattaaatac > 2:362687/1‑136 (MQ=255)
gACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 8:873125/140‑1 (MQ=255)
aCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGTAATTCGACGTACCGGACGAACTGATTGTTGACCGGATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGGTGATACCCTTAAATTCCATccgc > 2:456213/1‑138 (MQ=255)
aTGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTTACGTTAAATTAAATACGCCCAAAGt > 5:1015128/1‑140 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTAAATCCGCCGaaaatt > 4:196976/1‑137 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGAACGTATCGTAGGCCGCCGCGTTCACGCGACGTATGGTCGTGGTTATCTCTTTAAATTCAATCCGCCGAAAGTAg < 4:482922/140‑1 (MQ=255)
aagCGGGCATCAATGTTGATTACGGTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCAATGCGCCGAAAATATCAGGc > 4:1152129/1‑140 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTAGTGTTTATAACCTTTAAATGAATCCGCCGAAAGTAGAAGGCaa > 4:1047001/1‑140 (MQ=255)
gaaTCAATGTTGATTACGTTCTGGATTTCGACGTACCGGACTAACTGATTGTTGACCGTAGCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAg < 1:874912/136‑1 (MQ=255)
gTTGATTACGTTGTTGAATGCGCCGAACCGTACGAACTGATTGTTGACCGTATCGGAGGCCGCCGCGTTCACGGGCCGGCTGGGCGGGTTAATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTAc < 7:125629/140‑1 (MQ=255)
gTTGATTACGTGCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAc < 4:269444/140‑1 (MQ=255)
gATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCgg > 4:305706/1‑140 (MQ=255)
ttcagTTCTGGAATTCCACTTACCGGACGAACTGATTGTTGACCTTTTCTTAGGCCGCCGCGTGCACTCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTg < 8:272377/136‑1 (MQ=255)
ttACGTTCTGGAATTCGACGAACCGGACGAAGTGATTGTTTCCCGTATCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATACAATCCGCCTAATGTAGAAGCCAACGACGACGTTACCGGTg < 6:645712/140‑1 (MQ=255)
aCGTTAGGGAATTCGACGAACCGGACTAACTTAGTGTTGCCCGTCTCGTCGGCCGCCGCGTGCACGCGCCGTCTGGTCGTTTTTATCACGTTTGATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTgaa < 5:733598/140‑1 (MQ=255)
cGTTGTGGAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCGGCGGTCACGCGCCGTCTGGTCGTGTTAATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTga < 2:409873/138‑1 (MQ=255)
cGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTga < 2:954107/138‑1 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCAGGTCGTGGTTTTGACGTTAATTTCAATACCCCGAAAGTATAACGCAAATCCGACGTTACCGGGgaaga > 5:530562/1‑140 (MQ=255)
ttCTGGAATTCGACGTACCGCACTAACTGATTGTTGCCCGTTTCGTTGGCCGCCGGGTTCACGCGCCGTCGGGTCGTGTTTATCAGGTTAAATTCAATCCCCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTgaagaa < 6:46870/140‑1 (MQ=255)
tcgAATTCGACGTACCGGACTAACTGATTGTTGACCGAATCGTAGGCCGCCGCGTTCACGCGCCGTATGGTATTGTTTAACAAGTGAAATTCAATCCGCCCAAAGTAAAACGCAAACACGACCTTACCCGTgaagaaa > 2:310684/3‑137 (MQ=255)
taaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTg < 1:393467/137‑1 (MQ=255)
taaTGCGACGAACAGGACTCACTGTTTTTTGACCGTTTCGTAGGCCGCCGCGTTCACGCGCGTGCTGGGCGTGTTTATCACTTTAAATTAAATCCGCCGAAAGTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGAc < 3:37622/139‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGTTTGTTGACCGTAGGGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 7:294063/140‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACCGACt < 8:824052/140‑1 (MQ=255)
tACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTAAAGTTTAAATGAATACGCCGAAATTAGAAGGCAAAGCCGACGGTAACGGTGAAGAACTGACGACCCgga > 2:1020176/1‑136 (MQ=255)
ccGGACTAAGTGTTTGTTCACCTTATGGTAGGCCGCCGCGTTCCCGTGCCGTTTGGTGGTTTTTATCACGTTAAATTCAATCTGCCTAATTTCGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 1:289751/138‑1 (MQ=255)
ccGGACGAAGTTTTTGTTGTCGGTTTCGTAGGCCGCCGGGTTAAGGCGCAGTCTGGTTGTGTTTATCAGGTTAATTTAAATCCGCCGAATGTAGAAGGAATAGACGTCGTTACCGGTGAAGAACTGACTTCCCGTAAAGa < 4:548886/140‑1 (MQ=255)
ccGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 4:490058/140‑1 (MQ=255)
ggACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTAAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 8:523322/140‑1 (MQ=255)
ccGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:178228/139‑1 (MQ=255)
actaaCTGTTGGGTGACTGTATCGTAGGCGGCGGGTTTCACGGGCCTTCTGTTCGTGTTTTTAATGTTAAATTCAATCGGCGTAATTTAGAAGGAAATGACGACGTTACCGGTTAAGAACTGACTACCCGTAAATACGAt < 6:449976/137‑1 (MQ=255)
actaaCTGATTGTTTACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCGTAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:790642/137‑1 (MQ=255)
actaaCTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTATAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:864995/137‑1 (MQ=255)
aCGAAGTGTTTGTTGACCGTTTCGTAGGCCGCGGCGTGCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 2:490314/138‑1 (MQ=255)
aCGAACTGATTGTTTACCTTATCGTTGGCCGCCGCGTACACTGGCCGTCTGGTCGTGTTTATGACGTTAATTTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 2:776069/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:99854/140‑1 (MQ=255)
cGAACTGCTGGTTGACCGTAGCGTAGCCCGCGGCGGTCACGCGCCGTCGGGTCGTTTTTATCACGTTAAATTAAATCCGCCTAAAGTCGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGagc < 8:699074/140‑3 (MQ=255)
aCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGTGAAGAACTGACTACCCGTAAATACGATCAgg > 4:955378/1‑140 (MQ=255)
tGATTGTTGACGGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 5:66880/140‑1 (MQ=255)
tttgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 1:1175038/137‑1 (MQ=255)
aTTGTTGACCGTATCGTAGGCCGCCGCGTTCAAGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTCAATACGCCGCAAGTAGAAGGCAAAGCCGCCGTTAACGGTGAAGAAAGGACATCCCCTAAAGACGCTCAGGAaga > 8:401836/1‑140 (MQ=255)
ttatgACCTTATCGTAGGCCGCCGCTGTCACGCGCCGGCGGGGCGTGTTGCTCACGTTAAATGCAATCGGCCGAAAGTAAAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGAAgaga < 8:905873/137‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTAAATCCGCCGAAATTAGAAGGCAAATCCGCCGTTACCGGTGGAGAACTGACTACCCGTAAATACGATCAGGAagagc > 4:604529/1‑139 (MQ=255)
ttgACCGTATGGTTGGCCGCCGCGTTAACGCGCCGGCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 7:143036/140‑1 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGGTTAATTAAATACGCCGCAAGTAGAAGGCAAAGACGACGTTAACGGGGAAGAACTGACTACCCCTAAAGACGATCAGGGagagc > 1:465122/1‑137 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACCTTAACGGTGAAGCACAGACTAACCGTAAAGACGATCAGGAATAGAcc > 4:442706/1‑140 (MQ=255)
tgtaCCGTATCGTAGGCGGCCTGGTTCACGCGCCGTCTGGTCGGGTTTATCACTTTAAATTCAATCCGCCGAAAGTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 8:448585/137‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGGTAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGAATAACTGACTAACCCTAAAGACGATAAGGAtgagcacgt > 8:547836/1‑135 (MQ=255)
acaggTATCGTAGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt < 7:702634/136‑1 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTGTATAACGGTTAATTAAAACCGCCCAAAGTATAATGCAAAGACGCCGTTAACGGGGAAGAACTGACAACCCGGAAACACGATCAGGAATAGCCcgc > 2:1070911/1‑137 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAATACGACGGTACCGGTGAAGACCTGGCTACCCGGAAAGACCATCACGAAGAGACcgg > 2:996323/1‑137 (MQ=255)
tATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGAAGAACTGACTACCCGGTAAGCCGATCAGGAAGAGCCcgtacgta > 6:1009825/1‑140 (MQ=255)
tgggCCGCCTCGGTCCCGCGCCGTCGGGGGGTGTTTATCATGTTAAATTAAATCGGCGGAACTGAGAAGGCAAAGACGACGTTACCGGGGTAGAACTGACTAGCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGt < 8:1082371/138‑1 (MQ=255)
tgtgacacgcgTTCAAGAGCCTTGTGGTATTGTTTAACATTTTAAATTAAATCCGCCGAAATTAGACTGCAAAGAATACGTTACCGGTGAAGAACTGACTACCAGTAAAGACGATCAGGAAGAGACAGTACTTAAACGTc < 6:194673/133‑1 (MQ=255)
tggCCGCCGCGTTAACGCTCGGTCTGGTTGTGTTTATCACGTAAAATTCATTCCGCCGAAAGTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 8:954657/139‑1 (MQ=255)
tgccctccgcGTTAACGAGCCGGCTGGGCGTTATTATCACTTTAAATTCAAACCGCCGAACGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACTTAAACGTc < 4:798166/134‑1 (MQ=255)
cggCCGCCGCGTGCCCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 3:869506/139‑1 (MQ=255)
aGGCCGCCGCTTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 2:1065408/138‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:859507/140‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 6:553474/140‑1 (MQ=255)
cccccgcGTTCACCCGCCGTCGGGTCGTGTTAATCCTGTAAAATAAAAACCCCCGAACGTAGCAGCCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCt < 1:582677/135‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGCCGTTTCCGGGGAAGAACTGACAACCCGTAAAGACGATCAGGAAGAGCCCGTACGTAACCGTCgggg > 8:1116799/1‑139 (MQ=255)
cgccgcGTTCACGCGCCGTATGGTAGTGTTTATAACCTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGCCGTTTCCGGGGAATAACGGTCGACCCCGACAGCCGAGCCGGAAGAGACCGTCCCGAAACGtagggt > 8:377011/1‑135 (MQ=255)
cgccgcGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTTAAATCAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGCAGAAATGACAACCCGGAAAGACGTACCGGAAGAGACCGGACGGAAACggcgggg > 8:535880/1‑134 (MQ=255)
ccgcGTTCACGCGCCGTCGGGGCGGTTTTATCTCTTTAAATTCAACCCCCCGAAAGTCGATGGCAACCACGACGTTCCCGGGGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 7:302663/140‑1 (MQ=255)
ccgcGGTCCGGCGCCGTCTGGGCTTTTTTATCACGTTAATTTCAATCCGCCGAAATTCTAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATAAGGAAGAGACCGTACGTAAACGTCTGGt < 1:996442/138‑1 (MQ=255)
cgctTTCACGCGCCGGCTGGTGGCGTTTATCACTTTAAATTCAATCGGCCGAAAGACGATGTCAAAGACGACGTTCCCGGTGAAGAACTGACTACCCGTAACGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 4:857480/140‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGGGTTTTTAACTTTAAATAAAATCCGCCGAATGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 5:441465/140‑1 (MQ=255)
gtttCACTGGCCGGCTGGTCGTTTTTATCACGTTAAATTCAATCGGCCTCATTTACAAGGAAAAGTCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 2:718456/136‑1 (MQ=255)
ggTTCACGCGCCATCTGTTCGTGTTTATCACGTTAAATTCAATCCGCAGAAATTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 3:787298/139‑1 (MQ=255)
cgTTCACGCGCCGTCTGGTCGGGTTTATCACGTAAAATCCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 7:754270/140‑1 (MQ=255)
cgTTCACGCGCCGGCTGGTCGTGTTAATCACGTTAAATTAAATCCGCCGAAAGTAGACGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 7:461293/140‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 2:1151344/138‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGGTTATCCCGTTAAATTCAATCCGCCGAAAGTAGACTGCAAATACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGAAGATCAGGAAGAGACCGTTCGTCAACGTCTGGTTGTATAc > 6:353024/1‑140 (MQ=255)
tccACGCGCCGTCTGGGCTTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 7:62015/138‑1 (MQ=255)
ccgcgCCGTCTGGTGGTGTTTATCACTTTAATTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 6:1058888/139‑1 (MQ=255)
ccgcgCCGTCTGGGCGTGTTTATCACTTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 8:782274/139‑1 (MQ=255)
ccGTCTGGGCGTTTTTATAACTTTAAATTCAATCCGCCGAATGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 7:1088963/140‑1 (MQ=255)
cGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGCAGGCAAAGACGCCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGCCCGTACGTAAACGTCTGGTTTAATACCATCAGATg > 4:706881/1‑140 (MQ=255)
gTCTGGTCGTTTTTATCTCTTTAAATTAAATCCGCCTAAATTATAAGCAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 1:1070911/138‑1 (MQ=255)
gTCTGGTCGTGTTTATCACTTTAAATTAAATCCGCAGAATGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGa < 7:1050384/140‑1 (MQ=255)
tCTGGTCGTGGTTATCACGGTAAATTCAATCCGCCGAAAGTAGAATGCAAAGACGACGTTACCGGTGAAGAACTGAATACCAGTAAAGACGATCAGGAAGAGACCGTACGTAAACTTCTGGGTGAATACCATAAGATGAc > 6:39462/1‑140 (MQ=255)
tCTGGTCGTGGTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGCCGCCGTTTCCGGTGAAGAACTGACTACCCGGAAAGACGATCAGGAAGAGCCCGTACGTAAACGTGTGGTTGAATACCATCAGATGAc > 4:454517/1‑140 (MQ=255)
tGGTCGTGTTTATCACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACAACCCCTAAAGACGATCAGGAAGAGCCCGTACGTAAACGTCTGGGTGAATACCATCAGATGAc > 1:669729/1‑138 (MQ=255)
tCGTGTTTATCACGTTAAATTCAATCCTCCCAAAGATTAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGc < 1:960777/138‑1 (MQ=255)
gcGTGTTTATCACTTTAAATTCAATCCGCCGAACGTAGATGGCAAAGACGACGTGACCGTTGAAGCACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 3:966365/139‑1 (MQ=255)
tttATCAAGTTAAATTCATTCCGCCGAAAGTAGATGGCAAAGACGACGTTCCCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGc < 2:1199450/138‑1 (MQ=255)
ttagctcGTGAAATTCCAACCCCCGAAAGGAGACGCCAACGCCGACGGTACCGGTGAAGAACTGACGACCCGTAAAGACGATCAGGACGAGACCGTACGTACACGTCTGGGTGAATACTATCAGATGACTGCACCGCTGa < 4:895168/134‑1 (MQ=255)
ttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 6:958933/140‑1 (MQ=255)
aCGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCg < 2:521005/138‑1 (MQ=255)
gTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta > 4:992211/1‑140 (MQ=255)
ttAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 4:729184/140‑1 (MQ=255)
ttAAATTCAATCCGACTAAAGTAGAAGGCAAAGACGAATATACCGGTGAAGAACTGACTACCAGGAAATACGATCAGTAAGAGACCGTACGTAATCGTCATTTTGAATCCAATCACATTACTGCACCTCTTATAGGatac > 3:762163/1‑140 (MQ=255)
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GCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTA > NZ_CP022686/4056824‑4057096
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
