Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I0 R1
|
235 |
6960.4 |
9135780 |
98.4% |
8989607 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
13.8% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 13.8%
| 224.9
/ 3.2
| 155 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (35/86); new base A (19/10); total (59/96) |
| Fisher's exact test for biased strand distribution p-value = 4.26e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 157 total aligned reads displayed.
CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTACT > NZ_CP022686/4056825‑4057098
|
cggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAAt < 8:876832/139‑1 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑GACGTTAAATTCaagacgc > 6:510432/1‑135 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACTTTCTGGAATTCGACGTACCGGACGAACTGAGTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGa < 1:190962/140‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATccgcc < 4:342894/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGa < 6:849532/140‑1 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTATGCCGCCGCGTTCACGCTCCGTCTGGTCGTGTTTAT‑GACGGTTAATTCACTACGCCGATAgga > 5:584060/1‑138 (MQ=255)
taagGGGGCATCAATGTTTTTTACGTTCTGTAATTCGACTTACCGTACTAACTGTTTGTTGACGTTATCGTCGGCGGCCGCGTTCACGCGCGGTCTGGTCGTGTTTAT‑CAGGTTAAATTCAATCCGCCGAAAGTAGAAgg < 6:86700/139‑1 (MQ=255)
cctCAAGGTTGATTACGTGAGGTAATCCCGCGTCCCGCTCTAACTCATTTGTGACCGTATCGTAGGCCGCCGCGTGACCGCGCCGTCTGGGCGGGGTTAT‑CACGTTAAATTCCATCCGCCGAAATTAGAAGTCAAAgacg < 8:1043735/138‑1 (MQ=255)
attGTTCATTACGTTCTGTAATTCGACGTACCGGACTAAATTATATTTTAGCGTAGCTTTGGCCGCGGCGTTATCGCGCCTTTTTTCTTTGTTTAT‑TAGTTTAAATTCAATCCGCCGAAAGTAGAAGGAAAATTCGACGt < 2:105329/138‑1 (MQ=255)
gtagATTAGGTGCTGGAATTCGACGTACCGGCCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGCCGTTTTTAT‑CACGTTAAATTCAATCCGCGTAAAGTAGAAGGCAAAGACGACttt < 4:452582/135‑1 (MQ=255)
gTTTATTCCGTTCTGTAATCCGACGTACCGGACGAACTGATTGTTGACCGTATGTTTGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGATTAT‑CACGTTAAATTCAATCCGCCGAAAGTCGAAGGCAAAGACGACGTTAc < 8:664903/140‑1 (MQ=255)
gTTTATTACGTGATGTAATTCGACGTACCGTACGAACTGATTTTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCTAAAGTAGAAGGAAAAGACGACGTTAc < 7:1023330/140‑1 (MQ=255)
gTTGATTAGGTTCTGGAATTCGCCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTCGTTTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGtt < 3:990177/138‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTTTCTTAGGCCGCCGGGTTCACGCGCCGTCTGGTCGTGTTTAT‑GACGTTAAATTCAATCCGCCGAAAGTACAAGGCAAAGACGACGTTAc < 5:819109/140‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTTT‑AACGTTAAAATAAAACCGCCGAAAGTAGAAGGCAAAGACGACCTTAcccgg > 5:564976/1‑137 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑AACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAATACGACGTTACCGGt > 7:166078/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑AAAGTTAAATTAAATACGCCGAAAATATAAGGCAAACACGACGTTAACGGt > 6:945358/1‑140 (MQ=255)
ttAGGTTCTGGAATGCCACGTACGGGACGAACTGATTGTTGACCTTATCGTCGGCCGCCGCGTGCCCGGGCGGCCTGGGCGTGTTTAT‑CACGTTAAATCCCATCCCCCTAAAGTAGACGCCAAAGACGACGTTACCgg < 3:119948/138‑1 (MQ=255)
tACGTTCTGGAATTCGACTTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCAGCGCCGTCGGGTCGTGTTTAT‑AACGTTAAATTCAATACGCCGAAAGTTTAAGGACAAGACAGCGTTGCCggggg > 6:1008719/1‑137 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGGAAAGACGCCGGTACCGGTga > 2:956502/1‑140 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTAACGCGCCGTCTGTTCGTGTTTAT‑CCCGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGCCGGTACCGGTgg > 6:829712/1‑139 (MQ=255)
aCGTGCTGTATTTCGCCGTCCCGTACGAACTGATGGTGGCCCGTCTCGTCGGCCGCCGGGTTCACGCGCGGTCGGGTTGGGTTTAT‑CCCGTTAAATTCAATCCGCCGAATTTTGAAGGAAAAGACGACGTAACCGGTgaa < 8:136030/140‑1 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATGCGCCGAAAGTAGAAGGCAAAGACCACGGTTCCGGTgaaga > 7:821134/1‑140 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTAGTGTTTTG‑AAACTTATAATAAAACCCCCGAAAGTAAAAGGGAAAACCCCCGTTACCCGTgaaga > 1:1065107/1‑140 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTgaaga > 4:152162/1‑138 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTT‑AACGTTAAATTACATCCGCCGCAACTTGAAGGCAAAGACGCAGTTACCCGTgaagaaa > 3:159809/1‑137 (MQ=255)
gAATGCGACGTACCGGACGAACTGATTGTTGACCGTTTCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTGTTTTT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 2:893213/140‑1 (MQ=255)
aaTTCGACGTACCGCACGAACTGTTTTGTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTAC‑CACTTTAATTTCAATCCGCCTAACGAATAAGGCAACGACGACGTTACCGGTGAAGAACTGACt < 5:399029/140‑1 (MQ=255)
aaTTCGACCTACCGGACGAAATGATTGTTGACAGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGGCGTTTTTAA‑CACTTTAAATTCAAACCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 8:594075/140‑1 (MQ=255)
tttCGAGTTACCGTACGAACGTATTGTTGTCCGTTTGGTTGTCCGCGGCGTGCTCGCGCCGTATGGTGGTGTTTTT‑CACTTTAATTTCAATCGGCCGTAAGTTGATGGCAATGACGACGTTACCGGTGAAGAACTGACTa < 2:926441/139‑1 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑GACGTTAAATTGAATACGCCGAAATGTTAAGGGCAAGACGCCGTGACCCGGGTAGAAAGGACTAccc > 2:446857/1‑140 (MQ=255)
gTACCGGACTAAATGATTGTTCACGGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CAAGTTAAATTCAATCCGCCTAAATTAGATGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaa < 5:235053/140‑1 (MQ=255)
tACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTAT‑CACTGTTAATTCAATCCGCCGAAAGGATCAGGCTAAGACGACGGGACCGGTGAAGAACGGGCTACCCggtaa > 5:662394/1‑136 (MQ=255)
ttaaaCTGATTGTTGACAGTATGGTAGGCCGCCGCTTTCACGCGCGGTCTGGGCGTTTTTAT‑CACTTTAAATTCAATCCGCCCAAATTAGAAGCCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:945358/137‑1 (MQ=255)
cctaagtGATGGTTGCCCGTATCGTCGGCCGCCGCGTTCCCGCGCCGGCTGGGCGTTTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCGTAAAGACGAt < 1:255199/134‑1 (MQ=255)
cctaaCTGAGTGTGGACCTTATCGTAGGCCGACGATTTCACGCGCCGTATGGTCGTGTTTTT‑CAGGTTAAATTCAATCAGCCGAAATGAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:678407/137‑1 (MQ=255)
ccGAACTGATGGTTGACCGTATCGTCGGCCGCGGCGTTCACGCGCCGTGTGGTGGTGTTTAT‑CAGGTTAAATTAAATCCGCCTAAAGTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 7:830954/139‑1 (MQ=255)
aCGAACTGTTTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTCGTGTTTAT‑CAGGTTAAATTCAATCCCCCTAAAGTAGAATGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:841338/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:382941/138‑1 (MQ=255)
aCGAACTGATTGTGGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTATGGTCGTGTTTAT‑CACTTTAAATTAAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:249258/140‑1 (MQ=255)
cGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGAAGCACTGACTACCCGTAAAGACGa > 4:784439/1‑138 (MQ=255)
cGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTTT‑AACGTTAAATTAAAACCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGGGCATAACTGACTACCCGGTAAGACgc > 3:667708/1‑137 (MQ=255)
aCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTAT‑CACGTTAAATTAAATACGGCGAAAGTAGAAGGGAAAGAAGACGTTACCCGGGAAGACCTGAGATCCCGTAAAGACCAtaaag > 1:521160/1‑136 (MQ=255)
tttttgtggACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAATTAGATGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 2:242191/137‑1 (MQ=255)
tttgttgACCGTATCGTAGGCCGCCTCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 3:51169/137‑1 (MQ=255)
tgttgACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 8:345353/140‑1 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCAGGTAGTGTTTTT‑CACGGGAAAATAAATCCGCCGCAAGGAGAAGGCAACGACGTCGTTACCGGTGAAGAACAGACTACCCGTAAAGACGCTCAGGAAgagaac > 2:987045/1‑138 (MQ=255)
tgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGTAGAGACcg > 8:798969/1‑140 (MQ=255)
tgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGATGGTGGTGTTTAT‑CAGGTTAAATTCATTCCGCCTAACGTATATGCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcg < 8:665142/140‑1 (MQ=255)
gACCGTCTCGTCGGCCGCGGCGTTCACGCGCCGTGTGGTGGTGTTTAT‑CACGTTAAATTCAATCCGCCTAAATTAGATGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 3:388791/138‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTT‑AACGTTAAATTAAAACCGCAGCAAGTATAATGCAAAGAAGCCGGTAACGGGGAAGAAATTACTACCCGTAAAGACGATCAGTCAGAGACcgt > 8:965291/1‑140 (MQ=255)
caCCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCAGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt < 7:666707/139‑1 (MQ=255)
aCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACCTTAAATTAAAACACCCGAAAGTAGAAGGCAAATACGACGATACCGGTGAAGAAATGACTAACCCTAAAGACGATCAGGAAGAGAcctgt > 6:684075/1‑137 (MQ=255)
gttacGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGGGTTTAT‑CACGTTAAATTCAATCCGCCGAATGTAGAAGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtac < 4:37084/134‑1 (MQ=255)
gattcgtcgGCCGCCGGTTTCACGCGCCGTATGGTGGTGTTTAT‑CACTTTAAATTCAATCCGCAGAAAGTAGAAGGCAAAGCCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtac < 3:1007035/135‑1 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CAAGTTAAAATCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACAGCCTACCCGGAAAGACGATCAGGAAGAGACcgtacgg > 1:503100/1‑139 (MQ=255)
gTATCGTAGGCCGCCGAGTTCCCGCGCCTTCTGGTCTTGTTTAT‑CACTTTAAAATCAATCCGCGGAAAGTATACGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 5:655706/140‑1 (MQ=255)
tttCGTAGGCCGCCGCTTTCACGCGCCGTCTGGGGTGGTTTAT‑CAGGGTAATTTCATCCCCCCGAATTTATTAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgta < 7:61336/138‑1 (MQ=255)
ttCGTAGGCCGCCGCGTTCTCGCGCCGTCTGGTCTTTTTTAT‑CTGGTTAAATTCAAACCGCCTAAAGTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 3:867852/137‑1 (MQ=255)
tggacgccgcGTTCACGCGCCGTCGGGGAGTGTTAAT‑AACTTTAAATTCAATCCGCCTAAAGTAGAAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 6:634498/136‑1 (MQ=255)
tggCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCCAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 3:501490/137‑1 (MQ=255)
cggCCGCGGCGTTCACGCGCCGGCTGGGAGTGTTTAT‑CACGTTAAATTCAATCCGCGTAAAGTAGAAGGCAAAGACGACTTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 4:616271/137‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGACGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 2:704447/139‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCCAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 4:1161898/137‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATACAC‑TTAAAATAAAAACGCCGAAAGTAGAAGGGCAAGGCGACGGTACCGGGGAAGCACAGACTACCCGTAAAACCGCTCAAGGAGACACCGTACGTAAAccgc > 2:192654/1‑137 (MQ=255)
ccgccgCGTTCAGGCGCCGTCTGGGCGTGTTTAT‑CACGTTAAATTCAAACCGCCGAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTgg < 7:580818/140‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTTT‑GACGTTTAATTGAATACGCCGAAATTTTTATTGAAAGAAGGCGGTAGCGGGGTAGAACTGTCGACCCGTTAAGACGATGATGAATGGACCGTACGTTAACGtagggt > 2:381332/1‑135 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGGGTTTTT‑CACGTTAAATTGAATACGCCGAAAGTAGAAGGCAAAGCCGACGTTTCCGGTGAAGACCTGACTACCCGTTAAGACGATAAGGAAGAGACCGTACGTGAACGTCTggg > 6:892521/1‑139 (MQ=255)
ccgcGTTCTCGCGCCGTCTGGTCGTGTTTAT‑AACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGGCGTTACCGGGGAAGCAAGGGCTACCCGTAAAGCCGATCAGGAAGAGACCGTACCTAAACGTCTGGttt > 8:865850/1‑139 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTATAATGCAAAGACCACCTTAACGGTGTAGAACTTACTAACCGTAAAGACGAGAAGGAAGAGACCGAACATAAACGTCTGGttt > 2:721398/1‑139 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTAT‑AACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGGCTACCCCGAAAGACGATCAGGAAGAGACCGTACGTAAAAGTCTGGTTg > 6:252344/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGGTTAT‑CACGGTAAATTGAATCCGCCGAAAGTAGAAGGCAAAGACGACGTGTCCGGTGAAGAACTGGAGACCCCTAGAGCCGGTCAGGAAGAGACCCTACGTAAACGTCGGGtgg > 6:837381/1‑138 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTCGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 7:861560/140‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGGTTAT‑CACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAAGCCGCCGTGACCGGTGAATAACTGACTGACCGTAAAGCCGATAAGGAAGAGACCGTACGGAAAAGTCTGGTTg > 3:300607/1‑138 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTTT‑AACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTTCCGGTGGAGAACTGACTACCCGTAAAGACGATAAGGAAGAGACCGTAAGTAAACGTCTGGTTGa > 3:1052521/1‑138 (MQ=255)
cgTGCACGCGCGGTATGTCCTTGTTTAC‑CCCGTTAAATTAAATCCGCCGAAAGTCGAAGGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:89207/140‑1 (MQ=255)
ttCAGGCGCCGTCTGGTCGTGTTTTT‑CAGGTTAAATGCAAGCCGCCGAAAGTTGATGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 7:378810/140‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 3:904732/138‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:923850/138‑1 (MQ=255)
tgcACGCGCGGTCTGGTCGTGTTTTT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGGCTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 1:659200/138‑1 (MQ=255)
gcgcCTTCTGGGCGTGATTAT‑CACGTTAAATTAAATCCGCCTAAAGTAAAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 5:436986/140‑1 (MQ=255)
gcgcCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAAGACGACGTTTCCGGTGAAGAACTGACTCCCCCTAAATCCGCTCAGGAAGAGCCCGTACGTACACCTCTGGTTGAATAACATCa > 8:1070197/1‑140 (MQ=255)
gcGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 3:152162/137‑1 (MQ=255)
ccGTCTGGTCGTGTTTAT‑GACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGAAGCCGTTACCGGTGAAGAACTGACGACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt > 8:481858/1‑140 (MQ=255)
gggTCGTGTTTAT‑CCCGTTAAATTCAATCCCCCGAAAGAAGACCGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGAc < 4:738503/137‑1 (MQ=255)
tcttgtTTAT‑CACGTTAATTTCAATCCGCCGAATGTATTTGGAAATCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGc < 3:335712/135‑1 (MQ=255)
gcGTGTTTAT‑CACGTTAAATTCAAACCGCCGAAAGTAGAAGGCAAAGTCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 1:921910/139‑1 (MQ=255)
cGTGTTTAT‑CAAGTTAAATTCAATCCGCCGAAAGTTGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATtgctgcc > 4:750716/1‑137 (MQ=255)
gtgtTTAT‑CACGTTAAATTCAATCCGCCGAACGTACACGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 7:208485/140‑1 (MQ=255)
tttAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAACGTACGTAAACGTCTGGTTGAATAAAATCAGATGACTGCACCGCTg > 8:808596/1‑140 (MQ=255)
tttAT‑CACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACAATCAAATGACTGCACCGCTg > 2:383827/1‑140 (MQ=255)
ttAT‑CACGTTAAATGAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 4:250263/138‑1 (MQ=255)
aT‑CACGTTAAATTCACTCCGCCGAAAGTAGAAGCCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 2:442357/140‑1 (MQ=255)
cACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGCCGCCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCgg > 7:357426/1‑140 (MQ=255)
actttAATTTCAATCCGCCGAAAGTATACGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCg < 4:528600/135‑1 (MQ=255)
cGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCgg > 3:621254/1‑138 (MQ=255)
ggtAAATTCAATCCGCCGACAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 8:439392/138‑1 (MQ=255)
ttAAATGCACTCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 1:1056273/140‑1 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACAGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctact > 7:665371/1‑140 (MQ=255)
aTTAAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTactact < 6:911762/140‑1 (MQ=255)
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CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAT‑CACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTACT > NZ_CP022686/4056825‑4057098
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
