Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
17.7% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 17.7%
| 204.0
/ 6.5
| 138 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (25/80); new base A (19/11); total (46/92) |
| Fisher's exact test for biased strand distribution p-value = 1.09e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
AGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056826‑4057095
|
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAAt < 4:779915/140‑1 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAAATCAATacgc > 6:529416/1‑140 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCACCTATCGTAGGCCGCCGCCTAGACGCCCCGACTTGTC‑CAGTTTATCAACATAAATTCAATcccc > 4:1134451/1‑138 (MQ=255)
aCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATAACGGTAAATTAAATacgc > 8:799174/1‑138 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATGACGGTAAATTCAATccgccgc > 1:891744/1‑139 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATccgcc < 8:506312/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGa < 3:586507/140‑1 (MQ=255)
gAAAGAAGGGGGCTTCAATGTTGTTTACGTTCTGTAATTCGACGTTCCGGAGGTACTGTTTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCAAGTTAAATTGTATCCGCCGAATGTAg < 2:486484/140‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 6:41521/140‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 6:121014/140‑1 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGGTTATCACGTTAAATTAAATCCGCCCAAAGTa > 8:1023541/1‑138 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGAGTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATAACGTTTAATTCAATCCGGCGAAAGTAGa > 6:736667/1‑140 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATACGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGGTTTAT‑ACGGTAAAATAAAACCGCCGCAAGTa > 7:520813/1‑138 (MQ=255)
gaagCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTAAATCCGCCGAAAGTATAAgg < 4:1008267/140‑1 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGGTTATCACGTTTAATTCAATCACCGGCAAGTAGAACGCaa > 1:777352/1‑140 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCAGTCTGGTC‑GTGTTTATAACGTTAAATTAAATCCGCCGGAAATAGAAAGCaa > 1:437758/1‑140 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATGACGTTAAATTAAATCCGCCGAAAGTAGAAGGCaa > 8:258229/1‑138 (MQ=255)
ggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCTTAGGCCGCCGCGTTCACGCGCGGTCTGGTC‑GTGTTTATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAga < 1:275090/140‑1 (MQ=255)
cAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑ATGTTTATCACGTTAAAATCAATCCGCCCAAAGTAGAAGGCAAAGaccacg > 3:1119277/1‑140 (MQ=255)
tttGATTACGTTATGTAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTAc < 3:714073/139‑1 (MQ=255)
gttgttTACGTTCTGGAATTCGACTTACCGGACTACCTGATTGTTGACCGTATCGTTGGCCGCCGGTTTCCGGCGCCGGCTGGGC‑GTTTTTATCACTTTAATTACAATCCGCCGAAAGAAGAAGGCAAAGACGACGTTAc < 2:1084455/140‑1 (MQ=255)
ttGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTAACGCGCCGTCTGGTC‑GTGGTTATAACGTTAAATTAAATCAGCCGAAAGTAGAAGGCAAAGACGACGGTAcc > 6:87839/1‑140 (MQ=255)
tGATTACTTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGGCTGGTC‑GTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCg < 1:1008839/140‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGGTAAAATCAATCCGCCGAAACTATAAGGCAAAGACGACGGTAcccgg > 4:1047242/1‑137 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATAACGTTAAATTCAATACGCCGAAAGTATAAGGCAAAGCCGACGTTTACGGt > 4:1067992/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATAACGTTAAATTCAATACGCCGAAAGGAGAAGGCAAACACGACGTTACCCGt > 5:741229/1‑140 (MQ=255)
tttcGTTCTGGAATTCGACTTACCGGACTAACTGATGTTTGACCTTATCGTAGGCCGCGGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACTTTAAATTCAATCCGCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTg < 3:60104/137‑1 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGGTAAATTAAATCCGCCGATAATATCAGGCAAAGACGACGTTACCGGTga > 6:1017129/1‑140 (MQ=255)
cGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTgaag > 2:442235/1‑140 (MQ=255)
ttCGGGAATTCGCCTTCCCGGACGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTGCACGCGCCGGCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTgaag < 7:131979/138‑1 (MQ=255)
ggAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTTTGACGATAAATTCAATCCGCCGAAAGGTGAAGGCAAATACGCCGGTACAGGTgcagaaaagc > 2:344524/1‑136 (MQ=255)
taaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 6:705513/139‑1 (MQ=255)
gAATTCGACGTACCGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTC‑TTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGAc < 4:825172/140‑1 (MQ=255)
aaaTTCGACGTACCGTACTAACTGATTTTTTACCGTATCGTAGGCCGCCGCGTTCAGGCGCGGTCTGGTC‑TTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTg < 7:849713/137‑1 (MQ=255)
aaTTCGACGTACCGTACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 6:659469/140‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 2:1025770/140‑1 (MQ=255)
aaTGCGACGTACCGGACTAACTGATTGTTGACCGTCTCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTC‑GTGTTTATCACGTTAAATTCAAACCGCCTAAAGTAGAAGGCAAAGACGACGGTACCGGTGAAGAACTGACt < 3:592031/140‑1 (MQ=255)
cGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGGTTTTAAAGTTTAATTAAATACCCCGCTAGTAGAATGCAAAGCCGCCGTTACCTGTGAAGAACTGACTACCAGtt > 6:494430/1‑139 (MQ=255)
tACCGGCCTAACTGATTGTTGACGGTAGCGTTGGCCGCGGCGTTCACGGGCCGTCTGGTC‑GTGTTTATCACTTTAATTTCAATCCGCAGAAAGTAGATTGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 3:750968/140‑1 (MQ=255)
ccGTACGAACGGTTTTTTTACAGTATCTTCGTCCGCCGAGTGAACGCGCCTTCTTGTC‑GTGTTTATCACTTTAAATTCAATCCGCCTAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 3:868361/140‑1 (MQ=255)
ccGGACTAAATGATTGTTCACCGTATCGTAGGCCGCCGCGTACACGGGCCGTCTGGTG‑TTTTTTATCACGTTAATTTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 7:584386/138‑1 (MQ=255)
ggACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:268024/140‑1 (MQ=255)
cctaagtGATTGGTGACCGTATGGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTAATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:965587/134‑1 (MQ=255)
ccGAATTGTTTGTGGACCGTATCGTAGGCCGCCGCGTTCACGCGCGGGCTGGGC‑GGGTTTAACCCGTTAAATTCAATCCGCCTAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 8:557489/137‑1 (MQ=255)
ccGAACTGTTTGTTGACGGTATCGGAGGCCGCCGCTGTCACGCGCCGTGGGGTC‑GTGTTATTCACGTTAAATTCAATCCGCCGAATGTAGAAGCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:751831/139‑1 (MQ=255)
actaagtGATTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACTTTAAATTCAATCCGCCGAATTTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 1:547058/134‑1 (MQ=255)
actaaCTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 7:368816/135‑1 (MQ=255)
aCGAACTGATTGTTGACCGTTTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAGGTTACCGTTGAAGAACTGACTACCCGTAAAGACg < 8:609724/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATGGTAGGCCGCCGGGTTAACGCGCGGTCTGGTG‑GTTTTTATCACGTTAAATTCAATCCGCCTAAAGTAGATGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 7:668867/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGGA‑GTGTTTATCACTTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 8:653008/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCGGTGTGGGC‑TGGTTTATCTCGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:850856/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:430344/140‑1 (MQ=255)
aCGAACTGATGGTGGCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTTAATTCAATCCGCCTAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:312785/140‑1 (MQ=255)
ttGATTGTTGACTTTATGTTAGGCAGCCGCTTTCACGCGCCGTCTGTTC‑TTTTTTATCACTTTAAATTCAATCCGCCGAAAGTATAAGGAAAAGACGACGTTACAGGTGAAGAACTGACTACCCGTAAAGACGATCAGGa < 5:5229/139‑1 (MQ=255)
atGATTGTTGACCGTTTTGTAGGCCGCGGCGTTCAGGCGCCGGCTGGTC‑GTGTTTATCACGTTTAATTAAATCCGCTGAAATTTGAAGGCAAACACTACGTTAGCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGa < 2:735114/139‑1 (MQ=255)
aTTGTTACCCGTTTCGTAGGCCGCGGCGTTCCGGGGGCGTGTGGGC‑GTGTTTATCACGTTAATTTCAATCCGCCGAAAGTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 3:648772/140‑1 (MQ=255)
tgttgACCGTTTCGTTGGCCGCGGGGTTCACGCGCCGTGTGGTC‑GTGTTTTCCACGTTAAATTCAACCGGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 3:640319/140‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAATGCAAACACGCCGTTACCGGTGAAGAACAGCCAACCCGTAAAGTCGATAAGGAAcaga > 4:238647/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTTCCGGGGAAGAACTGACTACCCGGAAAGCCGATCAGGAAGAGCCcgt > 4:360696/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTAAAAATAAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt < 4:253146/140‑1 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATAACCTTAAAATCAATACGCCCAAACTAGAATGCAAAGAAGACGTTACCGGTGAAGAACAGTCTACCCGTAAAGACGATCAGGGATAGACcgt > 8:663813/1‑138 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTC‑GGGTTTATCACGGTAAAATCAAAACGCCGAAACGAGAAGGCAAAGCCGCCGGTACCCGTGAAGAACGGACAACCCCTAAACACCATCAGGAAGACACcctaccg > 6:150152/1‑138 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCCCGTTTAATTAAATCCCCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTTAATACGCTAAGGAAGAGACCgtaagtaa > 3:810930/1‑140 (MQ=255)
tggCCGCCGCGTTCTGGCGCCGGTTGGTC‑GTTGTTATCACGTAAAATTCACTCCGCCGAATTTAGAATGCAATGACGACGTTACCGGTGAAGAACTGACTTCCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:83882/139‑1 (MQ=255)
cggCCGCCGGGTTCACGCGCCGTGTGGTC‑GTGTTTATCACGTTAAATTAAATCCGCGCAATGTCGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTTCCCGTAAAGACGATCAGGTAGAGACCGTACGTAAACGTc < 4:1120122/139‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTC‑GTTTTTATCACGTTAAATTCAAACCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 5:101941/139‑1 (MQ=255)
ggCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCAAGTTAAATTCAATAAGCCGAAAGTAGAAGGCAAAAACGACGTTAACCCTGAAGAACTGCAAACCCCTAAAGACGAGCCGGACCCGACCGTACCTAAACgg > 8:978613/1‑137 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTTAAATCAATACGCAGAAAGTAGCAGGCAAAGACGACGTGAACCGTGAAGAACTTACGACCCGTATAGACGATCATGAATAGACAGTAAGTAAAAGTCTgggag > 4:606709/1‑137 (MQ=255)
cagcgTTCACGCGCCGTCTGGTC‑GTGTTTTTCACGTTAAAATAAAAACGCCGAAAGTAGAACGCAAAGACGACGCTAACGGTGAAGAACAGACTACCCCTAAAGACGATCACGAAAAGACCGGTCGTAAACGTCTggg > 8:57420/3‑137 (MQ=255)
gcgTTCCCGCGCCGTCTGGTC‑GTGTTAATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGGTGaa < 6:646235/140‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTTAATTCAATACGCCGAAAGTAGCAGGCAAAGACGAAGTGACCGGTGAAGCAATGACTAACCGTAAAGATGATAAGTCAGAGACCGTACTGAAACGTCTGCTTg > 8:72325/1‑138 (MQ=255)
ttgtgaCGCGCCGGGGGGGC‑TTGGTTATCACGTTAAATTCATTCCGCCCAATTAAGCCGGCAACGACGCCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGAAGAGACCGTACGTAAACGTCTGGTTGact < 6:770941/135‑3 (MQ=255)
cgTTCTGGCGCCGTCTGGTC‑GTGTTTATCTCGTTAAATTCAATCGGCCTAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 8:702321/138‑1 (MQ=255)
cgTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:741859/140‑1 (MQ=255)
cgTTCACGCCCCGTGTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:231884/140‑1 (MQ=255)
ttCACGGGCCGTCGGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCCAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 4:129430/140‑1 (MQ=255)
gtaccgcgCCGGCGGGGC‑GTGTTTATAACGTTAAATTCAATCCGCCGACAGAAGAAGGCAAAGACGACGTTCCCGGTGAACAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 7:1041189/134‑1 (MQ=255)
gcgcCGTCTGGTC‑GTGGTTTTGACGTTATATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACGTGTGAATAACTGACGACCCGTAAAGACGCTCCGGATGAGACCGTACGTAAAAGTATGGTTGAATACCAt > 8:311979/1‑138 (MQ=255)
cggtgtGGTC‑GTGTTTATCACGTTAAATTCAAGCCGCCGAACGTAGATGCCAAACACGACGTTACCGGTGAAGAACTGACTACCCTTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 5:173246/135‑1 (MQ=255)
tCTGGTC‑GTGTTTATGACGGTTAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCGTAAAGCCGATGATGAAGAGCCCGTACGTAAACGTCTGGTGGAATACCATCAGGTGAc > 2:294317/1‑140 (MQ=255)
tgttC‑GTGTTTATAACTTTAATTTCAATCCGCCTAATGTATAAGCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAATACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 1:253030/137‑1 (MQ=255)
ggggc‑GTTTTTATCACGTAAAATTCAATCCGCCTAAATTAGAAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAGCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 1:531711/136‑1 (MQ=255)
gggTC‑GTTTTTATCACGTTAAATTCAAGCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCCGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 1:626241/139‑1 (MQ=255)
gTC‑GTTTGTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCa < 6:936349/140‑1 (MQ=255)
tC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 6:421273/140‑1 (MQ=255)
gtggtgtTTATCACGTTAAATTCAATCCCCCGAAAGTAGAAGGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCa < 1:1013087/137‑1 (MQ=255)
gc‑GTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 6:473399/139‑1 (MQ=255)
gc‑GTGTATATCACGTTTAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGc < 8:263309/137‑1 (MQ=255)
tgtTTTTAACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACCTTACCGGTGAAGAACAGACTACCCCTAAAGACGATAACGAAGAGACCGTACGTAAACCTATGGTTGAATAAAAACAGATGCCTTCAcccc > 2:110098/1‑138 (MQ=255)
tgtTTATCACGTTATATTCAATCCGCCGAAAGTATAAGGAAAAGACGACGATACCGGTGAAGAACTCACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGc < 3:500395/140‑1 (MQ=255)
ttATCACGTAAAATTCAAAACGCCGAAAGTATACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 6:29453/140‑1 (MQ=255)
aaaaCGTTAAATTCAAACCGCCGAAAGAAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 6:868366/137‑1 (MQ=255)
aTCACGTAAAATTCAATCCGCCGAAAGTCGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 6:132684/140‑1 (MQ=255)
gTTAAATTCAATCCGCCTAAAGTAGATCGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 7:453538/138‑1 (MQ=255)
gTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 1:1157459/140‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGACGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 6:307935/140‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 4:1114146/140‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 3:25823/1‑140 (MQ=255)
taaaaaTCAAACCCCCTAAATTATTAGGCAAAGACGACGTTACCGGTGAAGACCTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGCTTCAATACCATCAGATGACTGCACCGCTGATCGGct < 7:1062472/136‑1 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctact > 5:854344/1‑140 (MQ=255)
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AGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTC‑GTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056826‑4057095
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
