Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F12 I0 R1
|
158 |
5737.7 |
7407908 |
98.3% |
7281973 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
14.2% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 14.2%
| 207.1
/ 5.2
| 129 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (35/66); new base A (19/4); total (59/70) |
| Fisher's exact test for biased strand distribution p-value = 3.81e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 130 total aligned reads displayed.
CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTA > NZ_CP022686/4056825‑4057096
|
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 3:283929/140‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 1:781615/140‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGa < 5:264075/140‑1 (MQ=255)
ttaaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAg < 8:68294/136‑1 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAAAGTTTAAATAAATACCCCGAAACTa > 5:192113/1‑140 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTAAATACGCCGAAAGTa > 1:166561/1‑140 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTa < 1:610594/140‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 1:826351/140‑1 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGa < 6:466555/140‑1 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCGCCGAAATTAGAAGGCaa > 3:438856/1‑140 (MQ=255)
cGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATACGCCGAAAGTATAAGGCaaa > 4:512243/1‑140 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAAAGTTAAATTAAAACCGCCGCAAGTAGAATGCaa > 7:29734/1‑138 (MQ=255)
attGTTTATTAGGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTTTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGt < 4:57239/138‑1 (MQ=255)
ttGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAACCGCCGAAAGTAGAAGGCAAAGACGACGTTAcc > 4:485819/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAAGTTAAATTCAATACGGCGAAAGTAGAAGGCAAAGACGTCGTTACAGGt > 6:515770/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATACGCCGAAAGTATAAGGCAAAGACGACGTTAACGGt > 2:916263/1‑140 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATCCGCCGAAAGTAGAAAGCAAACAAGACGATAACGGt > 8:815020/1‑138 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATACGCCGCAAGTAAAAGGCAAAGACGACGGTTCCggg > 8:229413/1‑137 (MQ=255)
cGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTACCGGTTAATTGAATCCGCCGCAAGTAGGAGGCCAAGACCTCGGTGCCGGTgg > 7:536700/1‑137 (MQ=255)
cGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATACCGGTTCATTAATTCCGCCGGAAGTTGATGGCAAAGGCGACGTTACCGGTgg > 7:276840/1‑137 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTATGGTCGTGTTTATAACAGTAAATTAAATGCGCCGACATTAGAATGCAAAGACCACGGTACAGGGgaagt > 5:723664/1‑139 (MQ=255)
tCTGGAATTCGACGTACCGGCCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGCCGACGTTACCGGTgaaga > 8:157467/1‑138 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAAGACGTCGTTAACGGTGAAGAACTg > 3:659572/1‑140 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACCTTAAATTAAAAACGACGAAACTAGAAGGCAAAGACGAAGTTAACGCTGAAGAAc > 7:654575/1‑138 (MQ=255)
taaTTTGACGTACCGGACGAACTGTTTGTTGACCGTATCGTAGGCCGCCGCGTTCACGGGCCGTCTGGGGGTGTTTATCACTTTAAATTCAAACCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 1:20970/139‑1 (MQ=255)
gAATTCGACGAACCGTACGAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTGTGGGCGTTTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGAc < 4:142902/140‑1 (MQ=255)
ttCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGGTTTGACGGTTAATTCAATCCCCCGCAAGTATAACGCGATCACGCCGGTACCGGTGAAGGACTGACTAc > 5:345229/1‑140 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACAGGGGAAGAACTGCCTAccc > 1:175897/1‑140 (MQ=255)
acccGGACTAACTTTTTGTTTACCGTATGGTTGGCAGCCGAGTTCAGGCGCGGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGAGGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 4:657191/138‑1 (MQ=255)
cgggACGAACTGTTTGTTGACGGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCAGGTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 2:327552/138‑1 (MQ=255)
ccGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 5:756320/140‑1 (MQ=255)
ccGGACGAAATGATTGTTGACCGTATGGTTGGCCGCCGCGTTCCCGCGCCGGCTGGTCGTTTTTTTCACTTTAAATTCAATCCGCCGAACTTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 5:206530/140‑1 (MQ=255)
ggACGAACTGTGTGTTCACCGTATCGTAGGCCGCCGAGTCCAGGCGCGGGCTGGTCGTTTTAATCAGTTTAAATTCAAGCCGCCGAAATTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 5:512021/140‑1 (MQ=255)
gACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGAGGTTTTGACGTTAAATTCAATCCGCCGAAAGGAGAAGGCAAAGACGACGTTACCGGGGAAGCACAGCCTAACCCGAAAgcaca > 6:489364/1‑136 (MQ=255)
actaaCTGTTTGTTGACCTTATCGTAGGCCGCCGCGTTAACGGGCCGTGGGTTCGTGTTTATCACGTAAAATTCAATCCGCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:187677/137‑1 (MQ=255)
actaaCTGAGTTTTGACCGTATCTGAGGCCGCCGCGTTCTCGGGCCGTGTGGGGGTGTTTATAACTTTAAATTCAAGCCGCCGAAAGTAGACGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:209204/137‑1 (MQ=255)
aCGAACTTATTGTTGACCGTTTCGTAGGCCGCCGCGTTAACGCGCTGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 7:554443/138‑1 (MQ=255)
aCGAACTGATTGTTGACGGTATGGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:526010/140‑1 (MQ=255)
aCGAACTGATTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAATGAAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:756661/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:406987/140‑1 (MQ=255)
aCGAACTGATTGTGGACCGTATCGTTGGCCGCCGCGTTCACGCGCGGTCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCGAAAGTCTACGGCAATGACGACGTTAGCGGTGAAGATCTGACTACCCGTAAAGACGAt < 2:705060/140‑1 (MQ=255)
ttaTTGTTGCCCGTATCTTAGGCCGCCGGGTGCACGCGCCGGCTGGTCGTTTTTATCACGTTAAATTCAAGCCGCCCAAAGTATAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 5:760257/138‑1 (MQ=255)
tGATTGTTCACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAGCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 2:242280/140‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 2:620680/140‑1 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGTTTTTCACGGTAAATTCAATACGCCGGAAGTAGAAGGCAAAGACGACGTTACCGGTTAAGAACTGACTACCCGTAAAGACGCTGAGGAAgaga > 7:682050/1‑138 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGTTCGTGTTTATCACCTTTAATTTAATCAGCCGAAATTAGAATGCAAATAAGAAGTTACAGTTGAAGAAATTACTACCCGTTAAGACCATCAGGAATAGACcgt > 6:203391/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGCCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt > 6:17830/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc > 3:834263/1‑110 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 4:834263/110‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGCACAGACTACCCGTAAAGCCGATCAGGAACAGCCcgt > 2:695850/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATCCCCCGAAATTAGAAGGCAAACACGCCCTTACCGGTGAAGAACTGACTACCAGTAAAGAACCTCAGGAAGAGACcgt > 1:76197/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATACGCCGAAAGTAGAATGCAAATACGACGGTTCCGGGGTATAACTGTCTACCCGTAAAGACGATCAGGAATAGACcgt > 3:510616/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAAATCAATACGCCGAAAGGAGAAGGCAAAGACGACGGTACCGGGGTAGAACAGACTTCCCGTAAAGCCGATCAGGAAGAGACcgt > 2:615884/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACCCGCCGTCTGGTCGTCTTTATAACGATAAATTAAAAACGCCGAAAGTATAAACCAAAGCCCACGTTACCGGGGAATAACAGACTACCCGTTAAGACTAAAAGGAATACAccct > 2:842303/1‑138 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACGACCCGTAAAGACGATAAGGAAGAGACcgt > 8:252422/1‑138 (MQ=255)
aTCGTAGGCCGCCGCTTTAACGGGCGGTCTGTTTGTGTTTATCACTTAAAATTCAAACGGCCTAACTAACAAGGAAAAGACGACGTTACCGGTGATTAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 7:619255/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGTTTATCACGTTAAAATAAATCCGCCGAAAGTTGAAGGCAAAGACGACGTTTCCGGTGAAGAACTGACTACCCCTAAATAAGATAAGGAAGAGACcgtacgt > 8:619255/1‑138 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTTAATTGAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGAAGGACTGCCTACCCGTAAAGACGCTCAGGAAGAGCCcgtacgg > 8:302913/1‑137 (MQ=255)
tCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAAATCAAACCGCCGAAACGAGAAGGCAAAGCCCACGTGACCCGTGAAGAACAGACTACCCGTAAATAAGATCAGGAAGGGACcgttagta > 8:121026/1‑133 (MQ=255)
tggCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 8:595199/137‑1 (MQ=255)
cggCCGCCGCGTTCTCGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCATTCCGCCGAAAGAAGAAGGCAAAGACGACGTTACCGGTGAAGATCTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 3:123169/139‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTACCACTTAAAATTCAATCCCCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACAGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 8:1648/137‑1 (MQ=255)
aGGCCGCCGCGTTCACGGGCCGTTTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 2:5695/140‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCTAAAGAAGAACGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 8:709720/138‑1 (MQ=255)
ccgccgCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTgg < 4:767774/140‑1 (MQ=255)
ccgccgCGTGAACGCGCCGTAGGGGTGTGTTTATCCCTTTAAATTCAATCCGCGGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCCTAAAGACGATCAGGAAGAGACCGTACGTATACGTCt < 8:645093/138‑1 (MQ=255)
cgccgcGTTCACGCGCCTTATGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGt < 1:916263/140‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGGGGAGAACTGACGACCCGGAAAGACGAAAAGGAATCTACCGTACGTAAACGTCgggg > 6:554691/1‑139 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGTAAGTAGAAGGCAAAGACGACGTTTCCGGGGAAGAACTGACTACCCGTAAAGACGAGCAGGAAGAGACCGTACGTAAACGTCTGGGTg > 5:881901/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGAAGAACTGACGACCCGTAAAGACGATCAGGAAGAGACCGTACGGAAACGTCTGGTTg > 6:355235/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGAAGAACAGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGttt > 6:355241/1‑139 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTGTTTAACACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 4:334333/140‑1 (MQ=255)
cggtCACGCGCCTGCTGGTCGTTTTTATCACTTTAAATTAAATCCGCAGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:8453/137‑1 (MQ=255)
cgTTCACGCGCCGTGTGGTCGTGTTTATCACGTAAAATTAAATCCTCTGAACTTATAAGGCAATGACGACGTTACCGGTTAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:8451/140‑1 (MQ=255)
cgTGCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 3:312311/140‑1 (MQ=255)
cgTCCACGCGCGGTCTGGGCGGGTTAAACACGTTAATTACCATCCGCCGAACGTAGACGGCAACGCCGACGTTCCCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTGGa < 7:78522/138‑1 (MQ=255)
ttCACGGGCCGTCTGGGCGGGTTTATCACGTTAAATTCAATCCGCCGACAGTCGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 4:488272/140‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCCAAGCCGACGTTACCGGGGATGAACTGCCTACCCGTAAAGACGCTCAGTAAGATACCGTACGGAAACGTCTGGTTGCAt > 8:433542/1‑138 (MQ=255)
gcgcCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 4:757711/140‑1 (MQ=255)
gcgcCGTCTGGTCGTGTTTAACACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 2:300554/140‑1 (MQ=255)
ccGTCTGGGCGTGTTAATCACGTTAAATTCAACCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 6:469920/140‑1 (MQ=255)
gTCGTGTTTAACACGTTAAATTCAATCCGCCGAAATTCTAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCa < 4:662444/140‑1 (MQ=255)
gtgtTTATCACTTTAAATTCAATCCGCCCAAAGTAGACGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 1:865964/140‑1 (MQ=255)
gtgtTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 3:932778/140‑1 (MQ=255)
tgtTTATCACCTTAAAATAAATACGCCGAAAGTAGAAGGCAAAACAGACCTTAACCGTGAACAACAGACTACCCCTAAAGACGATAAGCAAGACACCCTACGTAAACGTCTGGGTGAATACCATCATATGACTGCAACGc > 2:13172/1‑140 (MQ=255)
tgtTTAGCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGc < 6:328883/140‑1 (MQ=255)
gtTTATCACGTTAAATTCAATCCGCCTAACTGAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 1:438934/140‑1 (MQ=255)
tttATCACGTTAAATTAAATACTCCGAAAATAGAATGCAAATCAAACGTTAACTGTGAAGAACTGACTACCCGTAAATACGATAAAGTATATACCGTAAGAAAACGTATGGTTGAAAAACATAAGAAGACTGCAcacc > 8:519281/1‑135 (MQ=255)
ttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 8:439858/138‑1 (MQ=255)
cACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACTACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAACATGAAGAGACCGTACGTAAACGTCAGGTTGAATACCATCAGATGCCAGCACCGCTGATCgg > 6:298672/1‑140 (MQ=255)
cGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACGGCTGATCgg > 8:759825/1‑138 (MQ=255)
gtaaaaaTCAATCCGCAGAACTTATAAGTCAAAGACGACGTTACCGGTGAAGACCTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGGCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 7:105602/135‑1 (MQ=255)
gtaaaaTGCAATCCGCCTAAAGTAGACGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 7:156872/135‑1 (MQ=255)
ttaaattaaaTCCGCCGAAATTATACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 3:485819/140‑1 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctact > 2:233559/1‑140 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACAGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctacg > 2:40168/1‑139 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAAGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctact > 3:596317/1‑140 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAAGTTACCGGTGAAGAACTGACTACCAGTAAAGACGATAAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACAATCAGATGACTGCACCGCTGATCGGctact > 3:600846/1‑140 (MQ=255)
aaaTTCAATCCGCCGAAATTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctacta < 1:695850/140‑1 (MQ=255)
aaaTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 7:441216/1‑138 (MQ=255)
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CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTA > NZ_CP022686/4056825‑4057096
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
