Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
11 1 1
12 1 1
13 1 1
14 1 1
15 1 1
15 15 15

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 239 295
Multiple Base Substitutions 0 0
Deletions 9 54
Insertions 5 47
Mobile Element Insertions 4 18
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 257 414

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F73 I1 R1 26 0 44.8 1518598 99.2% 1506449 138.5
A2 F73 I1 R1 29 0 84.2 2875838 99.2% 2852831 138.7
A3 F73 I1 R1 27 0 139.9 4778260 99.2% 4740033 138.8
A4 F73 I1 R1 27 0 19.6 661800 98.9% 654520 139.5
A5 F73 I1 R1 30 0 41.4 1413620 99.2% 1402311 139.5
A6 F73 I1 R1 31 0 34.8 1203930 99.1% 1193094 139.7
A7 F73 I1 R1 29 0 73.0 2473040 99.2% 2453255 138.9
A8 F73 I1 R1 23 0 85.6 2911730 99.3% 2891347 139.0
A9 F73 I1 R1 26 0 74.0 2563470 99.3% 2545525 139.4
A10 F73 I1 R1 26 0 53.7 1833324 99.1% 1816824 139.5
A11 F73 I1 R1 23 0 119.7 4117902 99.2% 4084958 139.2
A12 F73 I1 R1 29 0 53.4 1802238 99.2% 1787820 139.7
A13 F73 I1 R1 31 0 162.6 5558530 99.2% 5514061 138.9
A14 F73 I1 R1 28 0 130.3 4467684 99.3% 4436410 139.3
A15 F73 I1 R1 29 0 140.0 4785556 99.3% 4752057 139.2

Mutation Needle Plot

Mutation Targets

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