Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
6 3 3
7 3 3
8 3 3
9 3 3
10 3 3
6 16 16

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 181 405
Multiple Base Substitutions 1 2
Deletions 5 48
Insertions 2 16
Mobile Element Insertions 0 0
Amplifications 47 62
Gene Conversions 0 0
Inversions 0 0
Total 236 533

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 22 0 3753.9 8502384 98.3% 8357843 135.1
A6 F2 I0 R1 117 0 5184.3 6857682 98.3% 6741101 135.2
A6 F13 I0 R1 235 0 6960.4 9135780 98.4% 8989607 135.7
A6 F35 I0 R1 157 0 6985.9 8006972 98.3% 7870853 134.9
A7 F2 I0 R1 252 0 7301.5 9636800 98.5% 9492248 135.6
A7 F13 I0 R1 230 0 5035.0 9125430 98.4% 8979423 135.8
A7 F36 I0 R1 179 0 8076.5 8499890 98.3% 8355391 135.9
A8 F2 I0 R1 122 0 5985.5 7364544 98.3% 7239346 135.6
A8 F12 I0 R1 158 0 5737.7 7407908 98.3% 7281973 135.6
A8 F35 I0 R1 304 0 9232.4 10623078 98.3% 10442485 135.6
A9 F2 I0 R1 193 0 6708.0 8620653 98.5% 8491343 136.3
A9 F13 I0 R1 203 0 11425.2 8793538 98.4% 8652841 135.9
A9 F36 I0 R1 107 0 8366.7 6299831 98.3% 6192733 135.5
A10 F2 I0 R1 233 0 6461.8 9239822 98.3% 9082745 135.7
A10 F13 I0 R1 150 0 9496.0 7621532 98.4% 7499587 136.2
A10 F35 I0 R1 195 0 10216.4 8585726 98.3% 8439768 135.8

Mutation Needle Plot

Mutation Targets

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