mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 74 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6082690 = | 69 (1.310) | 2 (0.040) | 3/226 | NT | 3.2% | coding (400/1083 nt) | purK | 5‑(carboxyamino)imidazole ribonucleotide synthase |
| ? | NC_002947 | 6082731 = | 57 (1.180) | coding (359/1083 nt) | purK | 5‑(carboxyamino)imidazole ribonucleotide synthase | |||||
| * | ? | NC_002947 | = 5983519 | 56 (1.070) | 3 (0.060) | 3/238 | NT | 4.9% | coding (4108/5049 nt) | PP_5242 | GAF domain‑containing sensor histidine kinase |
| ? | NC_002947 | = 5983556 | 62 (1.220) | coding (4145/5049 nt) | PP_5242 | GAF domain‑containing sensor histidine kinase | |||||
| * | ? | NC_002947 | 5978514 = | 65 (1.240) | 3 (0.060) | 3/238 | NT | 4.7% | coding (659/993 nt) | PP_5241 | LuxR family transcriptional regulator |
| ? | NC_002947 | 5978543 = | 58 (1.140) | coding (630/993 nt) | PP_5241 | LuxR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 5877063 | 58 (1.100) | 3 (0.070) | 3/198 | NT | 4.9% | intergenic (+29/+76) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein |
| ? | NC_002947 | = 5877097 | 69 (1.630) | intergenic (+63/+42) | rpiA/PP_5151 | ribose‑5‑phosphate isomerase A/hypothetical protein | |||||
| * | ? | NC_002947 | 5855012 = | 62 (1.180) | 3 (0.060) | 3/234 | NT | 4.7% | coding (976/1392 nt) | tcyP | sodium/cystine symporter |
| ? | NC_002947 | 5855053 = | 62 (1.240) | coding (1017/1392 nt) | tcyP | sodium/cystine symporter | |||||
| * | ? | NC_002947 | = 5756149 | 64 (1.220) | 3 (0.060) | 3/238 | NT | 4.5% | coding (1207/1437 nt) | glnG | two‑component system DNA‑binding response regulator GlnL/GlnG |
| ? | NC_002947 | = 5756181 | 65 (1.280) | coding (1239/1437 nt) | glnG | two‑component system DNA‑binding response regulator GlnL/GlnG | |||||
| * | ? | NC_002947 | = 5576711 | 62 (1.180) | 3 (0.060) | 3/234 | NT | 4.6% | coding (382/1536 nt) | PP_4906 | hypothetical protein |
| ? | NC_002947 | = 5576745 | 66 (1.320) | coding (416/1536 nt) | PP_4906 | hypothetical protein | |||||
| * | ? | NC_002947 | = 5435212 | 65 (1.240) | 3 (0.060) | 3/236 | NT | 4.6% | coding (100/2529 nt) | hrpB | ATP‑dependent helicase HrpB |
| ? | NC_002947 | = 5435240 | 62 (1.230) | coding (72/2529 nt) | hrpB | ATP‑dependent helicase HrpB | |||||
| * | ? | NC_002947 | 5201225 = | 65 (1.240) | 3 (0.060) | 3/224 | NT | 4.7% | coding (338/498 nt) | PP_4582 | membrane protein |
| ? | NC_002947 | = 5201220 | 63 (1.320) | coding (343/498 nt) | PP_4582 | membrane protein | |||||
| * | ? | NC_002947 | 5129071 = | 70 (1.330) | 3 (0.060) | 3/238 | NT | 4.2% | coding (82/438 nt) | PP_4515 | MarR family transcriptional regulator |
| ? | NC_002947 | 5129092 = | 68 (1.340) | coding (61/438 nt) | PP_4515 | MarR family transcriptional regulator | |||||