mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 337 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4636324 = | 88 (0.850) | 6 (0.060) | 4/164 | NT | 6.6% | coding (318/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | 4636375 = | 90 (0.940) | coding (369/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4634391 = | 85 (0.820) | 7 (0.070) | 5/164 | NT | 8.3% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 76 (0.790) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | = 4631855 | 108 (1.040) | 7 (0.070) | 5/166 | NT | 6.3% | coding (1123/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4631875 | 108 (1.120) | coding (1143/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | 4621831 = | 108 (1.040) | 4 (0.040) | 4/162 | NT | 4.1% | coding (63/1332 nt) | yjjJ | putative protein kinase |
| ? | NC_000913 | 4621874 = | 91 (0.960) | coding (106/1332 nt) | yjjJ | putative protein kinase | |||||
| * | ? | NC_000913 | 4601057 = | 104 (1.000) | 8 (0.080) | 5/168 | NT | 7.5% | coding (461/540 nt) | dnaT | DNA biosynthesis protein (primosomal protein I) |
| ? | NC_000913 | 4601089 = | 98 (1.000) | coding (429/540 nt) | dnaT | DNA biosynthesis protein (primosomal protein I) | |||||
| * | ? | NC_000913 | 4572060 = | 110 (1.060) | 10 (0.110) | 7/158 | NT | 9.7% | intergenic (+145/‑354) | yjiS/yjiT | DUF1127 family protein/pseudogene |
| ? | NC_000913 | 4572097 = | 89 (0.970) | intergenic (+182/‑317) | yjiS/yjiT | DUF1127 family protein/pseudogene | |||||
| * | ? | NC_000913 | 4557468 = | 93 (0.900) | 7 (0.080) | 5/156 | NT | 8.8% | coding (822/912 nt) | hypT | hypochlorite‑responsive transcription factor |
| ? | NC_000913 | 4557501 = | 64 (0.700) | coding (789/912 nt) | hypT | hypochlorite‑responsive transcription factor | |||||
| * | ? | NC_000913 | 4557049 = | 115 (1.110) | 9 (0.100) | 8/162 | NT | 8.2% | coding (57/393 nt) | iraD | RpoS stabilzer after DNA damage, anti‑RssB factor |
| ? | NC_000913 | 4557077 = | 97 (1.030) | coding (85/393 nt) | iraD | RpoS stabilzer after DNA damage, anti‑RssB factor | |||||
| * | ? | NC_000913 | = 4551007 | 87 (0.840) | 8 (0.080) | 7/162 | NT | 8.4% | coding (290/1344 nt) | gntP | fructuronate transporter |
| ? | NC_000913 | = 4551030 | 96 (1.020) | coding (267/1344 nt) | gntP | fructuronate transporter | |||||
| * | ? | NC_000913 | = 4534139 | 97 (0.930) | 15 (0.160) | 7/158 | NT | 14.6% | intergenic (‑86/+291) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment |
| ? | NC_000913 | = 4534160 | 89 (0.970) | intergenic (‑107/+270) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment | |||||