Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,020,229 |
T→G |
9.7% |
V133G (GTC→GGC) |
yjbB → |
Na/Pi cotransporter family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,020,229 | 0 | T | G | 9.7%
| 311.2
/ 7.4
| 172 | V133G (GTC→GGC) | yjbB | Na/Pi cotransporter family protein |
| Reads supporting (aligned to +/- strand): ref base T (48/103); new base G (16/5); total (64/108) |
| Fisher's exact test for biased strand distribution p-value = 1.55e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 178 total aligned reads displayed.
CTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTG > NZ_CP022686/3020090‑3020366
|
cttgttGCAGATGTCGGGACGGCGCTGCTGGCGCGTATTCTCACCTTCGATGTATCCTGGCTGTCACCGTTACTAATTTTTATCGGCGTGATTTTTATCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 7:467651/135‑1 (MQ=255)
tGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTATTTTTTCCTCGGACGCAAAAAGTCACGCGCCGGGCAACTGGGCCGCGT‑Cgg > 5:93/1‑138 (MQ=255)
gCAGATCTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGGCACCGTTACTTATTTTTCACGGCGTGATTTTTTTCCTCGGACGCAAACAGTCCCGCGCCGGGCAACTGGGCCGCGT‑CGGt < 4:202539/138‑1 (MQ=255)
aGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGATACTTAATTTTATCGGCGTGACTTTTTTCCTCGGACCAAAACAGTCACGCGCCAGGCAAAAGGAACTCCT‑CGGTATTg > 8:60026/1‑140 (MQ=255)
aTGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTTTTTTTTACGCGGGCGCCAACAGTACCGCGCCGGGGAACTGGGCCGcgg‑cgggctttgg > 7:903739/1‑133 (MQ=255)
aTGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCCGGGAACTGGGCCGCGG‑GGGTATTggg > 8:679858/1‑139 (MQ=255)
gggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGGCGCACAAAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGGATTGGTCtt > 3:386488/1‑138 (MQ=255)
gggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGG‑AGGTATTGGtggtgg > 7:376705/1‑135 (MQ=255)
gggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCATCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCCCGT‑CGGTATTggggtt > 4:900240/1‑134 (MQ=255)
gggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGG‑CGGGATTGGTCTTgg > 8:217240/1‑140 (MQ=255)
gggACGGCGCTGAAGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGAGTGATTTTTTTACTCGGGCCCAAACCGTCACGCCCCGGGCAACGGGCCCGCGTGCGGTTTTgtcgg > 3:797268/1‑134 (MQ=255)
ggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTg < 4:748173/138‑1 (MQ=255)
ggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTg < 3:946723/138‑1 (MQ=255)
gACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACTCGCCGGGCAACTGGGGCGCGT‑CGGGTTTGGTCTTgg > 3:526233/1‑138 (MQ=255)
gACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTgg > 4:532186/1‑138 (MQ=255)
gACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTgg < 1:713218/138‑1 (MQ=255)
gACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCCGGCCACGGGGCCGCGG‑CGGTATTGGTCTTgg > 4:390415/1‑138 (MQ=255)
gACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAAAAGTCAAGCGCCGGGGAACTGGGCCGCGG‑CGGTATTGGTCGTgg > 4:993382/1‑138 (MQ=255)
gACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTACAGGGGAGCCAACAGTCACGCGCCGGGCAACTGGGCCGCGG‑CGGGTTTGGTcgttg > 6:768299/1‑134 (MQ=255)
cgcTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGAATTTTTTACTCGGACGCAAACAGTCACGCGCCCGGCAACTTGGCAGCGG‑CGGGATTGGTCTTGGGcggt > 2:92227/1‑135 (MQ=255)
cTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCCACTGGGCCGCGT‑CGGTATTGGTGTTGGGGTGAtt > 3:1018007/1‑138 (MQ=255)
gATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGAtttt < 6:492608/138‑1 (MQ=255)
gATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGAtttt < 4:331711/138‑1 (MQ=255)
cgcgTATTCTCACCTTCGTTTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTgg < 3:563029/138‑1 (MQ=255)
cgcgTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTgg < 3:865076/138‑1 (MQ=255)
tATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGgcgcg > 4:278051/1‑137 (MQ=255)
aTTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTg < 3:73115/138‑1 (MQ=255)
tctcACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 1:309925/138‑1 (MQ=255)
tctcACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 3:480371/138‑1 (MQ=255)
tctcACCTTAGATTTATCCTGGCTGTCACAGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCTGGCAACTGGGCCGCGG‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 6:234067/138‑1 (MQ=255)
tctcAACTTCGATTTCTCCTGGCTGTCACCGTTACTTATTTTTATCGTCTTTAGTTTTTTCCTTGGACGCAAACAGTCACGTGCCGGGCAACTGGTCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 6:234068/138‑1 (MQ=255)
ctcACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACAGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAg > 1:282532/1‑138 (MQ=255)
cACGTTCGTTTTATCCTGGCTGTCTCCGTTTCTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTTTTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGa < 7:566343/140‑1 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGtt < 3:523275/138‑1 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGtt < 3:677163/138‑1 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGtt < 6:902509/138‑1 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGtt < 1:980879/138‑1 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGa < 8:100810/140‑1 (MQ=255)
aaCCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGtt < 1:135835/137‑1 (MQ=255)
aCCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGAt < 7:442455/140‑1 (MQ=255)
cTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACCGTCACGCGCCGGGCAACTGGGCCGCGG‑AGTGTTTGGGCTTGGGCTGATTTTACGGGCGGGGGAGTTGag > 2:444703/1‑137 (MQ=255)
cTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTTGTGTTGGGCTGATTTTAGTGGCGGGGGAGGTGAt > 6:369041/1‑138 (MQ=255)
cTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGAt > 4:808282/1‑138 (MQ=255)
cTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGACGCAAACAGTCACGCGCCGGGCAACTTGGCCGCTT‑CGGGATTGGTGTTTGGGTGATTTTACTGGCGCTGGAGTTGAt > 1:711404/1‑138 (MQ=255)
tCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtg < 4:794198/138‑1 (MQ=255)
cGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGGAAACAGTAACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTGTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGc > 8:778479/1‑140 (MQ=255)
cGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgt < 1:442875/138‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 5:505181/138‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 5:181762/138‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCa < 8:36812/140‑1 (MQ=255)
gATTTATCCTGGCTGGCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 4:470020/138‑1 (MQ=255)
aTCATGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGc < 2:904051/138‑1 (MQ=255)
ccTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCg < 5:713578/138‑1 (MQ=255)
cTGGCTGTCACCGTTACTTATTTTTATCGGCGTTATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGt < 2:598540/138‑1 (MQ=255)
tGGCTTGCACCGGTACTTATTTTTATCGGCGGGATTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCATCTGGGCCGCTT‑CGGTATTGGTGTTTGGTTTATTTTTCTTGAGATTGAGTTGATTGTGCAGGCCGTa < 6:663548/138‑1 (MQ=255)
ccGTTACTTATTTTTATCGGCGTGATTTTTTTACAAGGACGCAAACATTCACGCGCCGGGCAACTGGGCCGCGG‑GGGGATTGGTATTGTGGTGATTTTACAGGCGCTCGAGTTGAGTATTCAGGCCGTAAcccccctc > 4:898339/1‑134 (MQ=255)
ggTTATTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAATCAGTCACGCGCCGGGCAACTGGGCCGGGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATct < 5:849303/137‑2 (MQ=255)
ggTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCa < 3:900240/137‑1 (MQ=255)
cGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCa < 5:627955/138‑1 (MQ=255)
cGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGGGCAGGCCGTAACGCCGATCACt < 7:486994/140‑1 (MQ=255)
cTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAg < 5:826206/138‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGGTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGCTCACTCAGGCaaa > 8:641251/1‑140 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCa < 1:212750/138‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCa < 4:420008/138‑1 (MQ=255)
ttttATCGGCGTGATTTTTTTCCTCGGGCGCAAAAAGTCACGCGCCGGGCAACTGGGCCGCGT‑GGGGATTGGTCTTGGGGTGATTTTACTGGCGCGGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCCGGCaaa > 6:792488/1‑138 (MQ=255)
tATCGGCGTTATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCg < 8:801957/140‑1 (MQ=255)
tCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCg < 1:925882/138‑1 (MQ=255)
tCGGCGTGATTTTTTTCCTCGGACGCAAACAGGCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGtt < 7:16214/140‑1 (MQ=255)
cGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGGATTTGTGTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAAAGCCGATCACACAGGCAAACGGCgg > 2:264901/1‑137 (MQ=255)
cGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCa < 1:18945/138‑1 (MQ=255)
cGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAgg < 8:681934/140‑1 (MQ=255)
gTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAg < 3:301131/138‑1 (MQ=255)
aTTTTTTTCCTCGGACGCAAACAGGCACGCGCCGGGGAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTg < 3:334626/138‑1 (MQ=255)
ttttttCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGAt < 1:564129/138‑1 (MQ=255)
tttCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCtt < 4:140021/138‑1 (MQ=255)
cGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAgg > 8:256808/1‑125 (MQ=255)
cGGACGCAAACAGGCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAgg < 7:256808/125‑1 (MQ=255)
acaCAGTCACGCGCCGGGGATCTCGGCCGCGT‑AGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGCAGTTGGTTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTATGCCTCGCTGACt < 5:443624/136‑1 (MQ=255)
aCAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCg < 7:594231/140‑1 (MQ=255)
aGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCg < 2:404705/138‑1 (MQ=255)
aCGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACAt > 1:742362/1‑138 (MQ=255)
cgcgCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACAtt > 2:984479/1‑138 (MQ=255)
gcgcCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACAttt > 2:423528/1‑138 (MQ=255)
gcCGGGCATCTGGGGCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTg < 6:15800/138‑1 (MQ=255)
cGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCt < 1:153513/138‑1 (MQ=255)
cGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCt < 3:219962/138‑1 (MQ=255)
cGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCt < 3:163004/138‑1 (MQ=255)
cGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg < 7:760151/140‑1 (MQ=255)
ggCAACTGGGCCGCGT‑CGGGTTTGGTCTTGGGCTGTTTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGCCATTTTGCTgg > 1:337765/1‑138 (MQ=255)
cAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCg > 2:18763/1‑94 (MQ=255)
cAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGAt > 5:205635/1‑138 (MQ=255)
aaCTGGGCCTCGT‑CGGTATTTGTCTTGGGCTTTTTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGGTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATg < 1:894382/138‑1 (MQ=255)
aaCTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATg < 5:355806/138‑1 (MQ=255)
aaCTGGGCCGCGT‑CGGTATTGGTCGTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgtg < 8:837056/140‑3 (MQ=255)
aaCTGGGCCGCGG‑CGGTATTTGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 8:119514/140‑1 (MQ=255)
ggCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTg < 6:741386/138‑1 (MQ=255)
ggCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTg < 5:378390/138‑1 (MQ=255)
ggCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGAt < 7:821653/140‑1 (MQ=255)
cgT‑CGGTTTTGGTCTTGGGCGGATTTTACTGGCGCGGGAGTTGAATGTGCAGGACGTAACGCCGATCACTCAGGCAATCGGCGTTCAGGGGATCTTTGCCTCGCTGACTGGCGACTTTTTGCTGGATGCGCGGATTgg < 4:672881/138‑1 (MQ=255)
t‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTg > 4:963126/1‑138 (MQ=255)
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CTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGT‑CGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTG > NZ_CP022686/3020090‑3020366
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
