Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,020,229 |
T→G |
9.0% |
V133G (GTC→GGC) |
yjbB → |
Na/Pi cotransporter family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,020,229 | 0 | T | G | 9.0%
| 279.0
/ 2.3
| 153 | V133G (GTC→GGC) | yjbB | Na/Pi cotransporter family protein |
| Reads supporting (aligned to +/- strand): ref base T (38/97); new base G (14/4); total (52/101) |
| Fisher's exact test for biased strand distribution p-value = 6.89e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 166 total aligned reads displayed.
CTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTGCG > NZ_CP022686/3020090‑3020368
|
cggggTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 7:659478/138‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 3:18409/140‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 1:1183115/140‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 2:112920/140‑1 (MQ=255)
tGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGGCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTc > 4:859498/1‑140 (MQ=255)
gctgATGTCGGGTCGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCTCCGTTACTTTTTTTTATCGGCGTGATTTTTTTCCTCGGCCGCTAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGt < 5:31328/135‑1 (MQ=255)
gCAGATGGCGGGACGGCGCTGAGGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGt < 6:112659/138‑1 (MQ=255)
ccAGATGGCGGGACGGCGCTGATGGCGCGTAAGCTCACCATCGATTTATCCTGGCTGTCACCGTAACTTATTTTTATCGGGGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTAt < 7:799825/139‑1 (MQ=255)
aGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGAGTTTTTTCCTCGGCCCCAAACAGTCACGCGCCGGGCAACAGGGCCGCGTCGGGATTg > 8:647729/1‑140 (MQ=255)
aGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGAATTTTTTACTAGGTACCAAACAGTCACCCGCCGGGCAAAATGGCCCGGTCGGTaatt > 8:134012/1‑137 (MQ=255)
aTGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGAAGCAAACATTAACGCGACGGGCAACTGGGACGCGTCGGTATTggg > 4:17107/1‑139 (MQ=255)
tggcgtgACGGCGCTGATGGCGCGTATTCTCACCTGCGATTTCTCCTGGCTGTCCCCGTTAATTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGGCACGCGCCGGTCAACTGGGCCGCGTCGGTATTGGTc < 1:1133016/134‑1 (MQ=255)
tCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGACGCAAACAGTCCCCCGCCGGGCAACTGGGCCGCCGCGGTATTTGTAtt > 8:947249/1‑140 (MQ=255)
gggACGGCGCTGCTGGCGCGTATTCTCACCTTCGCTTTATCCTGGCTGTCAGCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGCCGACAACAGTCACGCCCCGGGCAACGGGGCGCCGTCGGTATTGGTGTTgg > 3:860202/1‑140 (MQ=255)
gggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTGTTTTTTACTCGGCCGCACACAGTCACGCGCCGGGCAACTGGGCCGCGGCGGTATTGGtggtgg > 7:187700/1‑135 (MQ=255)
ggACGGCGCTGTTGGCGCGTATTCTAACCATCGATTTATCCTGGGTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGTGCAACTGGGCCGCGTCGGTATTGGTCTTtgg < 4:905950/140‑1 (MQ=255)
ggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTggg < 4:1159777/140‑1 (MQ=255)
ggCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTGTCGGCGTGATTTTTTTCCTCGGGCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGGTTTGGGcg > 5:767423/1‑137 (MQ=255)
cgcTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTTTTTTTTACTCGGACGCCAACAGTCACGCGCCCGGCAACTGGGCCGCGTGGGGTTTGGGGTTGGGGTGGtt > 2:286357/1‑140 (MQ=255)
cgcTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCCCGCGCCGGGCAACTGGGCCGCGGCGGGATTTGGCTTGGGcggctt > 4:29097/1‑135 (MQ=255)
cgcTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACAGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGTCGCAAACACTCACCCCCCGGGCAACTGGGCCGCCTCGGGATTGGTGTTTGTCTGttt > 1:651459/1‑140 (MQ=255)
cTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGGTTTTTTTACTCGGCCGCAAACAGTCCCGCGCCGGGCAACTGGGCCGCGGCGGTTTTTGTGTTgggggggtt > 5:362641/1‑132 (MQ=255)
cTGATGGAGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACAGTTACTTATTTTTATCGGCGTGAATTTTTTCCTCGGACGCAAAAAGTCACACGCCCCGGAAAGGGGCCGCGTCGGTATTTGTCTTggggagctt > 6:607021/1‑132 (MQ=255)
aTGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTa < 5:620778/138‑1 (MQ=255)
cgcgTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGgcg < 7:279723/140‑1 (MQ=255)
tttCTAACCTTCGATTTATCCTGGCTGTCACCGTTTCTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 3:416440/139‑1 (MQ=255)
aTTCTCACCTTCGATTTATCCTGGCTGTGACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 2:864193/140‑1 (MQ=255)
aTTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 1:1077310/140‑1 (MQ=255)
aTTCTCACCTTCGATTTATCCTGGCTGTCACCGGTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 8:261451/140‑1 (MQ=255)
aTTCTCACCTTCGATTTATCCTGGCTGGCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGa < 8:773433/140‑1 (MQ=255)
ttCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTgg < 5:504820/138‑1 (MQ=255)
tctcACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGt < 1:770422/140‑1 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACGGGGCCGCGGCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGa < 3:236658/140‑1 (MQ=255)
aaCCTTCGATTTATCCTGGCTGTAACAGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGTACGCAAACAGTCACGCGCCGGGCATCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGtt < 6:275098/137‑1 (MQ=255)
tctaTTTATACTGGCTGTCACCGTTACTTTTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACTGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 3:921557/137‑1 (MQ=255)
tCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCACGGACGCAAAAAGTCACGCGCCCGGCAACAGGGCCGCGTGGGTATTGGTCTTTGGCGGATTTTTATGGCGGGGGTGTTGATtttg > 3:174886/1‑140 (MQ=255)
tCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 7:426250/140‑1 (MQ=255)
tCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGAGTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGACGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 4:747101/140‑1 (MQ=255)
tCGATTTATCCTGGCTGTCACCGCTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 1:293069/140‑1 (MQ=255)
taTTTATCCTGGCTGTCACGGTTACTTATTTTTTTCGTCGTGATTTTTTTCCTCGGACGAAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 5:32408/137‑1 (MQ=255)
taTTTATCATGTCTGTCACCGTTACTTATTTTTATCGTCTTTATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATtgtg < 6:360054/137‑1 (MQ=255)
gaattATCCTGGCTGTCACCGTTACTTATTTTTCTCGGCGTGATTTTTTTCCTAGGACGCAAACAGTCACGCGCCGGGCAAATGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCa < 1:671860/137‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGTGCAACTGGGCCGAGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCa < 8:799233/140‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCa < 2:547420/140‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCa < 2:77953/140‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCACGGACGCAAACAGTAACGCCCCCGGCAACTGGGCCCCGGGGGTTTTTGTGATTGGCAGATTTTTATGGCGCTGGAGGAGATtgtt > 6:891378/1‑137 (MQ=255)
gATTTAGCCTGGCTGTCACCGGTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCa < 7:518132/140‑1 (MQ=255)
tGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGAGCAGGCCGTAAc < 1:1030472/140‑1 (MQ=255)
gCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGGTTTTGTCTTGGGCTGATTTTAATGGCGCTGGAGTTGATTGTGCAGGCCGTAACGc > 8:63576/1‑140 (MQ=255)
cTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGcc < 8:403333/140‑1 (MQ=255)
tCACCGTTACTTTTTTTTATCGGCGTGATTTTTTTCCTCGGACTCAACCAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCg < 5:801736/138‑1 (MQ=255)
ccccGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGGCGCAAACAGTCACGCGCCGGGCCACAGGGGCGCGTCGGTATTGGGCTGGTGGTGGTGTTTCTGGCGGTGGAGTTTATTGTTCAGGCCGGTACGCCgcta > 3:673468/3‑137 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGCCGCAAAAAGTAACGCGCCGGGCCACTGGGCCGCGTGGGTTTTGGTCTTGGGCTGATTTTACTGGCGGTGGAGGTTATTTTGCAGGCCGTAACGCCCATc > 8:1076823/1‑140 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCGCGGCCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTTTTGGTCTTGGGGGGATTTTTCTGGGGCGGGAGGTGATTGTGCAGGCCGTAACGCCGagc > 4:461622/1‑138 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGACGCAAACAGTCACGCGCCGGGGAACTGGGCCGCGGCGGGATTTGTATTGGGCTGATTTTAATGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGAta > 4:274989/1‑139 (MQ=255)
aCCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGGCGGGATTGGTGTTGGGGTGCTTTTACTGGCGCTGGAGGTGATTGTGCAGGCCGTAAAGCCGAtaa > 2:1189610/1‑138 (MQ=255)
cGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACt < 7:1038954/140‑1 (MQ=255)
aCTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTg < 5:783596/83‑1 (MQ=255)
aCTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGGCGGTATTGGTCTTg > 6:783596/1‑83 (MQ=255)
ttttttATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCGGGCCGTAACGCCGATCACTCAGGCaaa < 7:888213/139‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCaaa < 2:1201740/140‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCa < 6:212272/138‑1 (MQ=255)
ttttATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGTGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACg < 8:516546/140‑1 (MQ=255)
tATCTGCGTGATTTTTTTCCTCGGACGCAAACAGTCACTCGCCGGGCAACTTGGCCGCGTCGGCATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACgg < 6:1128064/138‑1 (MQ=255)
tATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCg < 2:578990/140‑1 (MQ=255)
aTCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGt < 4:517438/140‑1 (MQ=255)
tCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTGGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGtt < 3:716587/140‑1 (MQ=255)
tCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGtt < 4:555344/140‑1 (MQ=255)
cGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCa < 5:636595/138‑1 (MQ=255)
cGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAgg < 2:766525/140‑1 (MQ=255)
gTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGt < 1:651332/140‑1 (MQ=255)
gTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGt < 4:756405/140‑1 (MQ=255)
ccTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGGCGGTTTTGGTCTTGGGCTGTTTTTACTGGCGCGGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCACGTGATCGTTgg > 5:394166/1‑137 (MQ=255)
gACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGc > 5:488820/1‑138 (MQ=255)
aaaCAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTTGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACt < 6:657832/138‑1 (MQ=255)
tCACGCGCCGGGCAACTGGGCCGCGTCGGTAATGGGCTTGGGCTGATTTTACTGGCGGTGGAGTTGATTGTGCAGGCCGTACCGCCGAACACTCAGTCAAACGGCGTTGAGGTGATCGTTGCCTCGCGGACTGGCGACAt > 3:178718/1‑140 (MQ=255)
cGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg < 8:1018437/140‑1 (MQ=255)
cGGGCAACTGGGCCGCGTCGGTATTGGTCTGGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg < 7:901739/140‑1 (MQ=255)
cGGGCAACAGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGACGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg < 4:310943/140‑1 (MQ=255)
gggCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCTGTCCGTAACGCCGATCACTCAGGCAAACGGCGGTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTg > 6:107604/1‑138 (MQ=255)
ggCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGAt > 3:41787/1‑140 (MQ=255)
ggCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGAt < 8:393581/140‑1 (MQ=255)
ggCAACTGGGCCGCGTCGGTATTGGTCGTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCCCTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTTGCGACATTTTGCTGGAt > 2:701001/1‑140 (MQ=255)
cAACTGGGCCGCGTCGGTATTGGTCTTGGACTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGAt > 6:331369/1‑138 (MQ=255)
aaCTGGGCCGGGTCGGTATTGGTCTTTGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGTCGACATTTTGCTGGATg < 6:42968/138‑1 (MQ=255)
aaCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 7:196880/140‑1 (MQ=255)
aaCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 3:1106244/140‑1 (MQ=255)
aaCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 7:647729/140‑1 (MQ=255)
aaCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 4:950076/140‑1 (MQ=255)
aaCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGGTGATTGTGCAGGCCGTACCGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 3:1005917/140‑1 (MQ=255)
aaCTGGGCCGCGGCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 1:953778/140‑1 (MQ=255)
aaCGGGGACGCGGCGGTATTGGTCTTGGGCGGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCCGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATg < 5:277183/138‑1 (MQ=255)
aCTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcgg > 1:786940/1‑139 (MQ=255)
aCTGGGCCGCGTCGGTATTGGTCTTGGGCTGAATTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACAAAGGCAAACGCCGTTGAGGGGCTCTTAGCCTAGCTGACTGGCCACATTTTGCAGGATgcgc > 3:950192/1‑140 (MQ=255)
tGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACGGGCGACATTTTGCTGGATGCGCTg > 2:470335/1‑140 (MQ=255)
gggCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGa < 2:2383/140‑1 (MQ=255)
ggacgcgTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGTGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGAt < 7:461166/137‑1 (MQ=255)
gcgTAGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGt < 4:994365/140‑1 (MQ=255)
ggTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTg < 8:828749/139‑1 (MQ=255)
cgTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTgg < 5:559781/138‑1 (MQ=255)
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CTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTGCG > NZ_CP022686/3020090‑3020368
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
