Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,020,229 |
T→G |
9.1% |
V133G (GTC→GGC) |
yjbB → |
Na/Pi cotransporter family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,020,229 | 0 | T | G | 9.1%
| 446.8
/ 9.6
| 235 | V133G (GTC→GGC) | yjbB | Na/Pi cotransporter family protein |
| Reads supporting (aligned to +/- strand): ref base T (63/143); new base G (21/6); total (86/149) |
| Fisher's exact test for biased strand distribution p-value = 5.43e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 249 total aligned reads displayed.
CTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTGCG > NZ_CP022686/3020090‑3020368
|
gtGGGGGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 2:1359494/139‑1 (MQ=255)
cgtggTTCAGAGGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 5:279647/137‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 2:248265/140‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 5:399116/140‑1 (MQ=255)
cTGGGTGCAGATGGCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGt < 1:627157/140‑1 (MQ=255)
ggTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACACTCACGCGCCCGGCCACTGGGCCGCGTCgg > 1:91468/1‑140 (MQ=255)
tGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTa < 1:25964/140‑1 (MQ=255)
tGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATGTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTTTTTTTTCCTCGGACGCAAACAGTCACGCGCCCGGGCACTGGGCCCCCTCgg > 3:475571/1‑138 (MQ=255)
gCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTAt < 1:91017/140‑1 (MQ=255)
gCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTAt < 1:976421/140‑1 (MQ=255)
gCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTAt < 2:1053307/140‑1 (MQ=255)
ccAGATGGCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGGCACCGTTACTTATTTTTCTCGGCGTGATTTTTTTCCTCGGACGCAAACAGGCACGCGCAGGGCAACTGGGCCGCGTCGGTAt < 7:743501/139‑1 (MQ=255)
gTCGGGACGGCGCTGATGGCGCGTATTCTCCCCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCt < 8:1236396/140‑1 (MQ=255)
tCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGCGTTTTTTGCTCGGCCGCAAACAGGCACGCGCCCGGCAACAGGGCCGCGTGGGGTTTGGTGtt > 7:1173070/1‑140 (MQ=255)
gtcaCGTCGCTGATGGCGCGTATTCTAACATTAGAATTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCACCTGGGCCGCGTCGGGTTTTGTCTggg > 6:255937/4‑140 (MQ=255)
gggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTgg > 8:1004615/1‑140 (MQ=255)
gggACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGGGGGTATTGGTGTTgg > 2:283135/1‑140 (MQ=255)
gACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGCCGCAAACAGTCACGCGCCGGGCAACTGGGCCGGGTCGGTATTGGTCTTgg > 4:1018805/1‑138 (MQ=255)
cgcTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGGCGCCAAACGTCCCGCGCCGGGCAACAGGGCCGCGGCGGTATTGGGCTTGGGCGGAt‑t > 7:288862/1‑140 (MQ=255)
cgcTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAAAGGGGCCGCGACGGTTTGGGGATTGGGGTGGt‑t > 8:1084472/1‑140 (MQ=255)
cgcTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACACTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTGTTGGGCTGCt‑t > 8:447253/1‑140 (MQ=255)
cTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTGGGCGGGCGCAAACAGTAACGCGCCGGGCACCTGGGCCGCGGAGGTATTGGTGGTGGGCTGAt‑t > 3:1015749/1‑138 (MQ=255)
cTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTTTTGGTCTTGGGCTGAt‑t > 4:1294895/1‑138 (MQ=255)
ggCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTgg < 7:1180692/140‑1 (MQ=255)
cgcgTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTTTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGCTGAG‑TTTAATTgcg > 8:330315/1‑140 (MQ=255)
cgcgTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGgcg < 7:968989/140‑1 (MQ=255)
gcgTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTGCTCGGACGCAAACAGTCACGCGCCGGGCAACAGGGGCGCGGCGGGATTGGTGTTGGGCGGTG‑TTTACttgggg > 5:749246/1‑135 (MQ=255)
aTTCTCACCTTCGATTTCTCCTGGCTGTCCCCGGTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGa < 2:556665/140‑1 (MQ=255)
ctcACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGCTTTTTTTACTCGGGCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTGGGTATTGGTCTTGGGCTGAT‑TTTTCTTGCGCGGGAg > 4:826210/1‑138 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGtt < 3:265021/138‑1 (MQ=255)
cACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGa < 6:446269/140‑1 (MQ=255)
aCCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTTGTCGTGGGGTGAT‑TTTTATGGCGCTGGGGTTGAt > 5:119235/1‑140 (MQ=255)
cTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGGGCTGGAGTTGAt > 4:752858/1‑138 (MQ=255)
tCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTTTTTTTTGCTCGGACGCAAACAGTCACGCGCCGGGCAACAGGGCCGCGTCGGGATTTGTCTTGGGCGGAT‑TTTACAGGCGCGGGAGTTTATtgtg > 2:13104/1‑140 (MQ=255)
cGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGTTTTTTTTACTAGGACGCAAAAAGTCAACCGCCGGGGAACAGGGCCGCGGCGGGATTTGTCTTGGGCTGAA‑TTTACTGGCGCGGGAGGTGAtttttc > 8:684449/1‑136 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGTCCGCGTCGGGATTGGTCTTTGGCTGAT‑ATTACTCGCGCTGGATTTGATtgtg > 4:978655/1‑138 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCa < 1:286424/140‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCa < 6:904934/140‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGGTGATTGTGCa < 6:602698/140‑1 (MQ=255)
gATTTATCCTGGCTGTCACCGGAACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACATTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCGGAT‑TTTACTGGCGCTGGAGTGGATtgtg < 3:321098/138‑1 (MQ=255)
gATTTATCCTGGCGGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAAGAGTCACGCGGCGGGCAACTGGGCCGCGTCGTTATTGGTCTTGGGCTGAT‑TTTACTGGCGCGGGAGTTGATTGTGCa < 2:740485/140‑1 (MQ=255)
tCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTACTAGGACGCAAACAGACACGCGCCGGGCAACTGGGCCGCGTAGGTTTTGGTCATTGGCGGTTATTTAAT‑GCGGAGGAGTTTATTGTTCAGGCCGt > 6:151417/1‑140 (MQ=255)
ccTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTa < 5:895606/140‑1 (MQ=255)
gCTGTCACCGTTACTTATTTTTATCGGCGTGCTTTTTTTACTCGGCCGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGGAGGGATTGGTCTTGGGGTGAA‑TTTTATGGGGCTGGAGTTGATTGTGAAGGCCGTAACGc > 7:239436/1‑140 (MQ=255)
tCACCGTTACTTATTTTTCTCGGCGTGATTTATATCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGAt < 6:181182/140‑1 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTGCTCGGGCGCAAACAGTCACGCGCCGGGCAACTGGGGCGCGGGGGGATTGGTATGGGGGGGAT‑TTTTATGGCGCTGGTGTGGATTTTGCACGCCGTAAAGcccctc > 7:492158/1‑136 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCCACTGGGCCGCGTCGGTATTTGTCTTGGGCTGAT‑TTTAATGGCGCAGGAGTTTATTTTGCAGGCCGTAACGCCGATc > 2:892637/1‑140 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTACACGGACGCAAACAGTCACGCGCCGGGCAACAGGGCCGCGTCGGGTTTTGTGTTGGGGGGAT‑TTTTATGGCGCGGGTGGTGATTGTGCAGGCCGTTAAGCCGaga > 1:472956/1‑138 (MQ=255)
aCCGTTACTTATTTTTATCGGCGTGATTTTTTTACTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTTGTGTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAAAGCCGag > 4:1137026/1‑137 (MQ=255)
ccGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTg > 4:1048700/1‑108 (MQ=255)
cGTTCCTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAACCAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAG‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCa < 4:1213573/138‑1 (MQ=255)
cGTTACTTATTTTTATCGGCTTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACt < 7:454089/140‑1 (MQ=255)
cGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACt < 5:618994/140‑1 (MQ=255)
cTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAg < 3:678309/138‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCaaa < 2:928787/140‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCaaa < 1:69842/140‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCa < 4:919454/138‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGGCACGCGCCGGGCAACTGGGACGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCaaa < 8:31736/140‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGGCACGCGCCGGGCAACGGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCaaa < 6:97444/140‑1 (MQ=255)
ttttATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACg < 1:562116/140‑1 (MQ=255)
tATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACgg < 4:651567/138‑1 (MQ=255)
tcgtcgTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGTGCAACTGTGCCGCGTCGGTATTGTTCTTCGGCTGAT‑TATACTTGCGCGGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGtt < 6:202702/140‑1 (MQ=255)
tCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCATCTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGtt < 2:515130/140‑1 (MQ=255)
cGTGATTTTTTTCCTCGGACGCAACCAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACTCATATCACTCAGGCAAACGGCGttattg < 8:588558/140‑5 (MQ=255)
cGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCa < 4:162457/138‑1 (MQ=255)
cGTGATTTTTTTCCTCGGACGCAAAAAGTCACGCGGCGGGCAAATGGGCAGCGTCGGTATTGGGCTTGCGATGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAgg < 2:785708/140‑1 (MQ=255)
cGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGc > 6:1146512/1‑140 (MQ=255)
ggACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTATCGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCg > 4:198687/1‑138 (MQ=255)
aaaCAGTCACGCGCCGGGCATCTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTgg < 6:818484/140‑1 (MQ=255)
aCAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCg < 5:999996/140‑1 (MQ=255)
aCAGTCACGCGCAGGGCAACTGGGACGCGTAGGTATTTGTCTTTGGCGGAT‑TTTACTTGCGCTGGCGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAAAGGCGTGCAGGTGATCTTTGCCTCGCTGACTGGCg < 5:924530/140‑1 (MQ=255)
tCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGATGACTGGCGACAt > 5:1263904/1‑140 (MQ=255)
cGGGCAACTGGGCCGCGTCGTTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCATGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg < 8:465890/140‑1 (MQ=255)
cGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg < 6:386298/140‑1 (MQ=255)
cGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTAAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg > 2:1132928/1‑140 (MQ=255)
cGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCAGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTgg < 5:1147296/140‑1 (MQ=255)
cGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCACGCCGTAACGCCGAGCACTCAGGCAAACGGCGTTCAGGTGATCTTTTCCTCGCTGACTGGCGACATTTTGCTgg < 1:1294000/140‑1 (MQ=255)
ggCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGAt < 5:1106484/140‑1 (MQ=255)
cAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGCTCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgc > 1:1180984/1‑140 (MQ=255)
cAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGAt > 3:1185994/1‑138 (MQ=255)
aaCTGGGCCGCGTCTGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 5:484790/140‑1 (MQ=255)
aaCTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATg < 4:270130/138‑1 (MQ=255)
cTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCt < 1:1239121/140‑1 (MQ=255)
attgggcgcgTCGGTATTGGTCTTGGGATGAT‑TTTAATTGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTAAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATgcg < 4:625190/132‑1 (MQ=255)
tGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACACCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGCCATTTTGCTGGATGCGCTg > 6:1052320/1‑140 (MQ=255)
gggCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGACGCGCTGa < 5:132608/140‑1 (MQ=255)
ggCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATGTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGAt > 7:1015440/1‑140 (MQ=255)
ggCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTg < 3:1294895/138‑1 (MQ=255)
ggCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTg < 3:158029/138‑1 (MQ=255)
ccGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTg < 2:1245488/140‑1 (MQ=255)
ccGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTg > 6:916375/1‑140 (MQ=255)
ccGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTg > 6:709060/1‑140 (MQ=255)
ccGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCGGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGAt < 4:540521/138‑1 (MQ=255)
gcgTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTTCAGGCCGTAACGCCGATCACTCAGGc > 1:1045843/1‑76 (MQ=255)
cgTCGGTCTTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTg < 6:1157251/140‑1 (MQ=255)
cgTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTgg < 3:1299083/138‑1 (MQ=255)
cgTCGGTATTGGTATTGGGCTGAT‑TTTACTGGCCCTGGAGTTGATTGTGCAGGCCCTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTTCTGGCTGCGCTGATAGGTg > 6:68908/1‑140 (MQ=255)
cgTCGGTAGTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGAGCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTgg < 3:784573/138‑1 (MQ=255)
tCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCa > 7:604684/1‑49 (MQ=255)
tCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTgag > 1:1255565/1‑138 (MQ=255)
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CTGGGTGCAGATGTCGGGACGGCGCTGATGGCGCGTATTCTCACCTTCGATTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAT‑TTTACTGGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACTCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACTGGCGACATTTTGCTGGATGCGCTGATTGGTGCG > NZ_CP022686/3020090‑3020368
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
