Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
21 3 3
22 3 3
23 3 3
24 3 3
25 3 3
6 16 16

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 54 99
Multiple Base Substitutions 0 0
Deletions 6 49
Insertions 1 15
Mobile Element Insertions 0 0
Amplifications 58 65
Gene Conversions 0 0
Inversions 0 0
Total 119 228

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 25 0 6588.1 6984912 98.4% 6873153 135.9
A21 F2 I0 R1 250 0 7941.3 10065440 98.4% 9904392 135.7
A21 F12 I0 R1 161 0 7599.7 7742956 98.4% 7619068 136.2
A21 F35 I0 R1 172 0 9488.3 8446099 98.4% 8310961 135.8
A22 F2 I0 R1 131 0 6528.3 7458602 98.3% 7331805 134.9
A22 F12 I0 R1 155 0 10343.2 7959900 98.3% 7824581 135.7
A22 F36 I0 R1 115 0 7085.7 6751310 98.0% 6616283 134.5
A23 F2 I0 R1 149 0 6417.9 7472560 98.3% 7345526 136.2
A23 F12 I0 R1 160 0 5913.0 7762702 98.3% 7630736 134.8
A23 F35 I0 R1 260 0 12066.0 10091732 98.4% 9930264 136.2
A24 F2 I0 R1 156 0 6203.1 7417694 98.3% 7291593 135.1
A24 F12 I0 R1 219 0 6233.0 8545888 98.5% 8417699 136.5
A24 F34 I0 R1 250 0 9531.8 9714240 98.2% 9539383 134.3
A25 F2 I0 R1 177 0 8677.0 8845236 98.5% 8712557 136.1
A25 F12 I0 R1 228 0 6189.6 9352045 98.4% 9202412 136.3
A25 F36 I0 R1 164 0 10221.7 7964032 98.3% 7828643 136.0

Mutation Needle Plot

Mutation Targets

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