Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
11 1 1
12 1 1
13 1 1
14 1 1
15 1 1
16 1 1
17 1 1
18 1 1
19 1 1
19 19 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 305 377
Multiple Base Substitutions 0 0
Deletions 8 62
Insertions 6 60
Mobile Element Insertions 7 25
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 326 524

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F73 I1 R1 33 0 77.0 2636344 99.1% 2612616 139.2
A2 F73 I1 R1 28 0 161.3 5699896 99.3% 5659996 139.4
A3 F73 I1 R1 23 0 178.8 6243766 99.3% 6200059 139.3
A4 F73 I1 R1 27 0 211.6 7358776 99.3% 7307264 139.3
A5 F73 I1 R1 37 0 152.5 5346736 99.2% 5303962 139.5
A6 F73 I1 R1 22 0 108.2 3720756 99.3% 3694710 138.8
A7 F73 I1 R1 27 0 59.0 2035004 99.3% 2020758 139.0
A8 F73 I1 R1 30 0 83.3 2909128 99.3% 2888764 139.1
A9 F73 I1 R1 30 0 54.0 1878228 99.2% 1863202 139.1
A10 F73 I1 R1 34 0 113.1 3988162 99.3% 3960244 139.1
A11 F73 I1 R1 26 0 148.5 5206078 99.3% 5169635 139.1
A12 F73 I1 R1 28 0 94.5 3320338 99.3% 3297095 139.2
A13 F73 I1 R1 29 0 168.5 5953234 99.3% 5911561 139.2
A14 F73 I1 R1 26 0 65.3 2245954 99.3% 2230232 139.0
A15 F73 I1 R1 21 0 115.3 3996176 99.3% 3968202 139.0
A16 F73 I1 R1 26 0 114.7 3982346 99.4% 3958451 139.2
A17 F73 I1 R1 29 0 73.2 2528136 99.3% 2510439 139.3
A18 F73 I1 R1 22 0 83.4 2868466 99.3% 2848386 139.6
A19 F73 I1 R1 26 0 81.7 2791006 99.4% 2774259 139.6

Mutation Needle Plot

Mutation Targets

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