Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A127 F1 I1 R1	15	330.5	20417406	95.5%	19498622	76.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	REL606	2,193,779	G→T	L143I (CTT→ATT)	yeiB ←	conserved inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	REL606	2,193,779	0	G	T	99.6%	859.6 / NA	222	L143I (CTT→ATT)	yeiB	conserved inner membrane protein
Reads supporting (aligned to +/- strand): ref base G (0/1); new base T (71/149); total (71/151)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 253 total aligned reads displayed.

GCCGATGCATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCA  >  REL606/2193706‑2193851

gCCGATGCATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATcc                                                                        <  2:5183448/76‑1 (MQ=255)

  cGATGCATCCGGCGTCCAGGCGCGGCTGGGCTGGGCGGC‑GGGAAA‑CAGCCCCCATAAACACAAAACACCCATcccc                                                                      >  1:635345/1‑76 (MQ=255)

   gATGCATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCcca                                                                     <  2:9832139/76‑1 (MQ=255)

    aTGCATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCccac                                                                    <  1:8929624/76‑1 (MQ=255)

     tGCCTCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCccacc                                                                   <  2:1987159/76‑1 (MQ=255)

     tGCATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCccacc                                                                   <  1:918697/76‑1 (MQ=255)

     tGCATCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTCGGGAAAA‑AACCCCCAAAAAAACAAAAACCCCAACcccccc                                                                    >  2:4495115/1‑74 (MQ=255)

      gCATCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGAAAT‑CAGCCCCCATAACAGCAAAACGCCAATCCccacca                                                                  >  1:7176298/1‑76 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAg                                                                 <  1:6183783/76‑1 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAg                                                                 <  1:7450448/76‑1 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAg                                                                 <  2:3723144/76‑1 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTT‑GGGAAA‑CCGCCCCAAAAAAACCAAAACAACAAAACCCCCCAg                                                                 >  2:7577325/1‑76 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGGAAA‑CAGCCCCCATAAAAGCAAAACGCCAAACCcccccac                                                                 >  1:1623268/1‑75 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGGAAA‑CAGCCCCCATAAAAGCAAAACACCCAACCccacccg                                                                 >  1:2619200/1‑74 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGGAAA‑CAGCCCCAATAACAGCAAAAAGCCAAAACcccccac                                                                 >  1:5481302/1‑75 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAAACCccacccg                                                                 >  1:10066241/1‑74 (MQ=255)

       cATCCGGCGTCCAGGCGCGGCTGGGCTGGCCGTT‑GGGAATCCCACCCCAAAAAAGGCAAAAC‑TCAACACCCACCAg                                                                 >  2:1375687/1‑76 (MQ=255)

         tCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGaa                                                               <  2:5484709/76‑2 (MQ=255)

         tCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGAt                                                               <  2:7290025/76‑1 (MQ=255)

         tCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGAt                                                               <  1:9598972/76‑1 (MQ=255)

         tCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGAt                                                               <  2:8245437/76‑1 (MQ=255)

          ccGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATa                                                              <  2:9079038/76‑1 (MQ=255)

          ccGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAACCCCCACCAGATa                                                              <  2:7092542/76‑1 (MQ=255)

           cGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATaa                                                             <  1:3255046/76‑1 (MQ=255)

            ggCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATaaa                                                            <  2:3045306/76‑1 (MQ=255)

            ggCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATaaa                                                            <  1:9333643/76‑1 (MQ=255)

            ggCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATaaa                                                            <  1:10128900/76‑1 (MQ=255)

            ggCGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGAAAT‑CAGCCCCCATAACAGCAAAAAGCCAATCCCCACCAGATaaa                                                            >  1:4501529/1‑76 (MQ=255)

             gCGTCCAGGCGCGGCTGGTCTGGCTTTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAg                                                           <  2:1677146/76‑1 (MQ=255)

             gCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAg                                                           <  1:4775729/76‑1 (MQ=255)

              cGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGc                                                          <  1:4255587/76‑1 (MQ=255)

              cGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGc                                                          <  1:5170177/76‑1 (MQ=255)

              cGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGc                                                          <  1:6579588/76‑1 (MQ=255)

              cGTCCAGGCGCGGCTGGGCTGGCTGTC‑GGAAAA‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGc                                                          >  1:2385120/1‑76 (MQ=255)

               gTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCa                                                         <  2:1216490/76‑1 (MQ=255)

                tCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCAt                                                        <  2:2193772/76‑1 (MQ=255)

                tCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCAt                                                        <  1:8629433/76‑1 (MQ=255)

                tCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCAt                                                        <  1:9056855/76‑1 (MQ=255)

                 ccAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATg                                                       <  1:2089237/76‑1 (MQ=255)

                 ccAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATg                                                       <  2:7451176/76‑1 (MQ=255)

                  cAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGa                                                      <  2:1054919/76‑1 (MQ=255)

                    ggCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACg                                                    <  2:1521590/76‑1 (MQ=255)

                      cgcgGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGcc                                                  <  2:637607/76‑1 (MQ=255)

                       gcgGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCt                                                 <  2:3010142/76‑1 (MQ=255)

                       gcgGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCt                                                 <  1:497854/76‑1 (MQ=255)

                        cgGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTg                                                <  2:8722989/76‑1 (MQ=255)

                         ggCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGt                                               <  1:6013949/76‑1 (MQ=255)

                          gCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTa                                              >  2:4843937/1‑76 (MQ=255)

                           cTGGTCTGGCTGTC‑GGTAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACTCCTGTAt                                             <  2:3928914/76‑1 (MQ=255)

                           cTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTAt                                             <  1:3386275/76‑1 (MQ=255)

                             ggTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTa                                           >  2:6527934/1‑76 (MQ=255)

                             ggTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTa                                           >  2:5313516/1‑76 (MQ=255)

                             ggTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTa                                           <  2:4450270/76‑1 (MQ=255)

                             ggTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTa                                           >  2:8603925/1‑76 (MQ=255)

                              gTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTaa                                          >  1:3888420/1‑76 (MQ=255)

                              gTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTaa                                          <  1:8539594/76‑1 (MQ=255)

                               tCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTaaa                                         <  1:4629467/76‑1 (MQ=255)

                               tCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTaaa                                         <  2:10148075/76‑1 (MQ=255)

                                    cTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGc                                    >  1:8723993/1‑76 (MQ=255)

                                    cTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGc                                    >  2:5402530/1‑76 (MQ=255)

                                     tGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCt                                   >  2:5904122/1‑76 (MQ=255)

                                     tGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCt                                   <  2:1707047/76‑1 (MQ=255)

                                      gTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCtt                                  <  2:2056610/76‑1 (MQ=255)

                                      gTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCtt                                  <  2:1623268/76‑1 (MQ=255)

                                       tC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCttt                                 <  2:2531435/76‑1 (MQ=255)

                                        c‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCACCACCAGATAAAGCATGACGCCTGTATTAAACAGGCtttt                                >  1:4712531/1‑76 (MQ=255)

                                          ggAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCttttt                               <  1:3565044/76‑1 (MQ=255)

                                          ggAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCttttt                               >  1:8312337/1‑76 (MQ=255)

                                           gAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTa                              <  1:636932/76‑1 (MQ=255)

                                           gAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTa                              <  2:3191025/76‑1 (MQ=255)

                                           gAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTa                              >  2:2877748/1‑76 (MQ=255)

                                           gAAAT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTa                              <  1:9252278/76‑1 (MQ=255)

                                            aaaT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTAc                             >  2:1833133/1‑76 (MQ=255)

                                             aaT‑CAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTAcc                            >  1:2313438/1‑76 (MQ=255)

                                                acAGCCACAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGa                          <  2:7941201/75‑1 (MQ=255)

                                                 cAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGAt                         <  1:1734996/76‑1 (MQ=255)

                                                 cAGCCCCAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGAt                         <  2:8843313/76‑1 (MQ=255)

                                                    ccccAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGgc                      >  2:9174320/1‑76 (MQ=255)

                                                    ccccAATAACAGAAAAACGCCAATCCCCACAAGATAACGCCTGACGATTGTATTAAACAGGCTTTTTACCGATgcg                      >  2:4606162/1‑74 (MQ=255)

                                                       cAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCa                   >  2:3419986/1‑76 (MQ=255)

                                                       cAATAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCa                   >  2:5705889/1‑76 (MQ=255)

                                                         aTAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATc                 >  2:4293112/1‑76 (MQ=255)

                                                         aTAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATc                 >  1:7546087/1‑76 (MQ=255)

                                                         aTAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATc                 >  1:7926245/1‑76 (MQ=255)

                                                         aTAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATc                 <  2:2747909/76‑1 (MQ=255)

                                                          tAACAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATcg                <  2:7628375/76‑1 (MQ=255)

                                                           aaCAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATcgc               >  2:1767116/1‑76 (MQ=255)

                                                            aCAGCAAAACGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATcgcg              <  2:1637146/76‑1 (MQ=255)

                                                               gCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCAc           <  1:2039571/76‑1 (MQ=255)

                                                                 caaaCGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCa         <  2:9488793/75‑1 (MQ=255)

                                                                 aaaaCGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCa         <  1:7998643/76‑1 (MQ=255)

                                                                 aaaaCGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCa         >  1:5102489/1‑76 (MQ=255)

                                                                  aaaCGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAg        <  1:7737609/76‑1 (MQ=255)

                                                                     cGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgccg     >  2:6020885/1‑76 (MQ=255)

                                                                     cGCCAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgccg     >  1:3215050/1‑76 (MQ=255)

                                                                       ccAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAgccgcc   >  1:5723101/1‑76 (MQ=255)

                                                                       ccAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCACCGCGCCCCAgccgcc   <  2:3129469/76‑1 (MQ=255)

                                                                        cAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCca  >  1:2628631/1‑76 (MQ=255)

                                                                        cAATCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGAGGGCGCATCGCGCACCAGCCGCca  <  2:9290042/76‑1 (MQ=255)

                                                                        cAACCCCCACCAGAAAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCACCGCCCCCCAGCCGCca  <  2:8654154/76‑1 (MQ=255)

GCCGATGCATCCGGCGTCCAGGCGCGGCTGGTCTGGCTGTC‑GGAAAT‑CAGCCCCAATAACAGCAAAACGCCAAGCCCCACCAGATAAAGCATGACGCCTGTATTAAACAGGCTTTTTACCGATGGCGCATCGCGCACCAGCCGCCA  >  REL606/2193706‑2193851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A