Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,935,324 |
T→G |
12.4% |
N705T (AAC→ACC) |
lacZ ← |
beta‑galactosidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,935,324 | 0 | T | G | 12.4%
| 226.7
/ 6.9
| 123 | N705T (AAC→ACC) | lacZ | beta‑galactosidase |
| Reads supporting (aligned to +/- strand): ref base T (27/78); new base G (16/2); total (43/80) |
| Fisher's exact test for biased strand distribution p-value = 4.97e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
ATGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATCCAG > NZ_CP022686/3935189‑3935463
|
ttGCAAAAATCCGTTCCGATGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGttt < 2:301262/137‑1 (MQ=255)
aTGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGttt < 6:488063/138‑1 (MQ=255)
aTGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGttt < 1:530270/138‑1 (MQ=255)
aTGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGttt < 3:950563/138‑1 (MQ=255)
aTGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTgg < 8:369234/140‑1 (MQ=255)
tGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGgttt > 1:730996/1‑137 (MQ=255)
tGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGt > 7:26276/1‑140 (MQ=255)
tGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCAGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTg > 3:634683/1‑138 (MQ=255)
cAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTTGt > 5:333181/1‑138 (MQ=255)
aaaaTCGGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGTAGGGGAGTGGCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCa < 8:288059/140‑1 (MQ=255)
aaaaTCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTg < 1:135971/138‑1 (MQ=255)
aaaTCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCAc < 7:467547/140‑1 (MQ=255)
aaaTCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGGCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGc < 5:908438/138‑1 (MQ=255)
aaaTCCGTTCCGCTGGTGGGCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGc < 1:1013337/138‑1 (MQ=255)
gTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTAcgcg < 8:271767/140‑1 (MQ=255)
gTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTAcg < 3:319680/138‑1 (MQ=255)
cttCCGCTGGTAGTCAGTTGCGCGATGGCGTGGGCCGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTAcg < 5:943212/137‑1 (MQ=255)
ttCCGCTGCTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGAGTCCGGCTTCTGACCATGCGGTCGCGGGTGGGTGGACTAcgc > 4:900544/1‑138 (MQ=255)
tCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTAcgcg < 5:150506/138‑1 (MQ=255)
tCCGCTGGTGGTCAGTTGAGGCATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTAcgcg < 2:567794/138‑1 (MQ=255)
cGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTa < 1:361356/138‑1 (MQ=255)
gCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGGGGCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGAGGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTAc < 6:703776/138‑1 (MQ=255)
tggtCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTa < 4:916415/138‑1 (MQ=255)
tggtCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGc < 7:826854/140‑1 (MQ=255)
tggtCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGc < 7:183429/140‑1 (MQ=255)
ggtCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGTCGCTGATTTGTCCGCCTTCTGACCATGCGGTCGCGTTTGGTTTCACTTCGCGTACCCTTaagc > 8:486100/1‑137 (MQ=255)
tCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATAGCTGCCAGGCGCTGCTGTGTCCGGCATCTGACCATGCGGTCGCGTTTGGTGTCACAACGCGTACCGTTAgac > 6:363711/1‑136 (MQ=255)
gATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCAGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTcc < 1:862083/138‑1 (MQ=255)
aTGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTTGTTGCACAACGCGGACCCTTTGCCAGAGTTGTCCg > 5:60527/1‑138 (MQ=255)
aTGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTGGTTGCACTTCGCGTACCGGTAGCCAGAGTTGTCCg > 5:27144/1‑138 (MQ=255)
tGGCGTGGGACTCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCTGTCGCGTTTGGTTGCACTACGCGTACCTTTAGCCAGAGTTGTCCgg < 5:194335/138‑1 (MQ=255)
gCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGCCCAGGCGGTCGCGGGTGGGTGGGCTCGGCGGGCCGTGAGCGAGCGTTGTgcggcg > 6:899217/1‑138 (MQ=255)
gCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACAACGCGTACCGTTAGCCAGAGGTGTCCGgcg > 6:287992/1‑138 (MQ=255)
gTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTTGTTGCACTACGCGTTCCGTTAGCCAGAGTTGTGCGgcgcc > 4:758777/1‑137 (MQ=255)
gTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTTGCCAGAGTTGTACGgcgcg > 6:65711/1‑137 (MQ=255)
gTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCACAGTTGTCCGgcgcg > 2:997711/1‑137 (MQ=255)
gTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTAAGCGTACCGTTAGGCAGAGTTGTCCGGCGct > 6:111463/1‑138 (MQ=255)
gTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTGTTTGGACAAAGCGTAACGGTAGACAGTGTTTTACGgagcg > 1:864780/1‑137 (MQ=255)
ggACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTTGACTAAGCGTAACGTTTGCCATAGTTGTACGGCGctata > 6:91604/1‑135 (MQ=255)
aCGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGc < 7:468903/140‑1 (MQ=255)
aCGAGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCg < 5:825867/138‑1 (MQ=255)
ggAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGGCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCg < 7:114278/140‑1 (MQ=255)
ggAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTg < 5:295819/138‑1 (MQ=255)
ggAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCg < 8:185749/140‑1 (MQ=255)
gAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTAcg > 6:541921/1‑99 (MQ=255)
gAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTGGTTGCACTACGCGTACCGTTAGCCCGAGTTGTACGGCGCTCGCCGGCTGc > 1:27928/1‑138 (MQ=255)
aGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCTCTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCGCGCCGgcggcg > 5:355485/1‑138 (MQ=255)
tgtCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCggcagttc < 3:318555/138‑1 (MQ=255)
gtCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCggcagttcagg < 7:683833/140‑1 (MQ=255)
gccACGCTGAGGATTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGGCCGGCGTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCggcagttcagg < 7:798747/138‑1 (MQ=255)
tCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTTGTTTCACTACGCGGACCGTTATCCAGAGTTGTGCGGCGCGCTCCGGCGGCggccgttaag > 1:158744/1‑138 (MQ=255)
tCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTGGTTGCACTACGCGGACCGTTTGCCCGACTTTTGCCGCGCTGTGCGGCAGCcggagttgaa > 1:215071/1‑135 (MQ=255)
tCACGCTGAGGTATTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTTGTTGCACAAAGCCGACCCTTATCCACAGTTGTACGGCGCGCACCCGCAGCggcacataag > 6:120040/1‑132 (MQ=255)
cGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTGGTTGCACTACGCGTACCGTTAGCCAGCGTTGTCCGGCGCTCGCCGGCTGCggcagttcagggc > 1:994709/1‑136 (MQ=255)
gCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCggcagttcaggcag < 6:232082/138‑1 (MQ=255)
gCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTAGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCggcagttcaggcag < 5:373139/138‑1 (MQ=255)
cTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGGTTGGTTGGACTACGCGTACCGTTAGCCAGAGTTGTACGGCGCGCTCCGGCGTCggcaggtgaggcagt > 1:313331/1‑138 (MQ=255)
aGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGTCTTCTGACCATGAGGTCGCGGTTTGTTGCACGACGCGATCCGTTTTCCAGAATAGTCAGGCGCGATACGGCTGCggcccttcagtcaggtga > 2:467614/1‑134 (MQ=255)
aGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGGACCGTTTGCCCGCGGTGTCCCGCGCGGTCCGGCGGGGGCCGTTAACGCCGTtcaaa > 7:818490/1‑139 (MQ=255)
ggTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTtcaa < 2:964437/138‑1 (MQ=255)
ggTTTTCCGCCAGACGCCATAGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTATCACTTCGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTtcaatc < 7:617142/140‑1 (MQ=255)
gTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTtcaatca < 7:327903/140‑1 (MQ=255)
gTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTtcaaa > 4:766367/1‑137 (MQ=255)
gTTATCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTtcaatca < 8:695008/140‑1 (MQ=255)
ttttCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTtcaatcaa < 8:26276/140‑1 (MQ=255)
tttCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTtcaatca < 3:758777/138‑1 (MQ=255)
tCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGTGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTg > 8:830949/1‑140 (MQ=255)
gCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGc < 6:852273/138‑1 (MQ=255)
gACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCt < 7:898104/140‑1 (MQ=255)
cgcgATTGCTGCCAGGCGCTGATGTGTCCGGCTGCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTg < 7:238511/140‑1 (MQ=255)
cGCCATTGCGGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCt < 4:569857/138‑1 (MQ=255)
tgctgcCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGGCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGcc < 7:96067/140‑1 (MQ=255)
gctgcCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGTGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGc < 2:871327/138‑1 (MQ=255)
gagacAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGcc < 1:714174/134‑1 (MQ=255)
ctgcCAGGCGCTGATGTGTCCGGCTTCTGACGATGCGGTCGCGTTTGGTTGCACTACGCGGACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGcc < 5:773074/138‑1 (MQ=255)
aGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGAACAACGCGTACCGTTAGCCAGAGTTTTACGGCGCGCGCCGGCTGCGGCAGTTAAGGGAGTTCAATCAACTGCTTACCGTGGGGGCCAACaa > 2:624968/1‑137 (MQ=255)
gcgcTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCag < 8:339809/140‑1 (MQ=255)
gcgcTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGGTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATcc < 5:398671/138‑1 (MQ=255)
gtGATGTTTCCGGCTTCTGACCATGCGGTCGCGTGTGGTTGCACTACGCGTACCGTTAGCAAGAGTTGTCCGGAGCTATCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCaga < 3:553527/137‑1 (MQ=255)
tCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTACGGCGCTCTACGGGGGCGGCAGTTCAGGCAGTTCAAAAAAAAGCTTTCCTTTCGGGCCAACCTCCAGAGGCACTTCAc > 8:647974/1‑140 (MQ=255)
tCCGGCTTCTGACCATGCGGTCGCGGTTGGGTGCACAACGCGTACCGTTAGCCAGAAGTGTACGGCGCGAAACCGCTGCGGCAGTTCAGGGCGTTCAAAGAACAGCTTACCATTCGGGCCCACATACACGGGCAAATCAc > 8:921660/1‑140 (MQ=255)
cGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCt < 3:743625/110‑1 (MQ=255)
cGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCt > 4:743625/1‑110 (MQ=255)
ccATGCGGTGGCGTTTGGTTGCACTAGGGGTTCCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGGTGCTGCAGTTGAGGCAGATGAATCTCCTGCTTACCTTGCGGGCCAACATCGAGAGGGTGTTCACCTCTTGGCAg < 4:661096/138‑1 (MQ=255)
ccATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTGGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCg < 8:306009/140‑1 (MQ=255)
ccATGCGGTCGCGTTTGGTAGCACTACGCGTACCGTTAGCCTGAGTTGTCCGGCGCTCTCCGTCTGCGGCAGTTCAGGCAGATCAATCAACTGCTTACCTTGCGGGCCAACATCCACAGGCACTTCACCGCTTGCCAg < 5:367201/138‑1 (MQ=255)
ccATGCGGTCGCGGTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAg < 3:563565/138‑1 (MQ=255)
ccATGCGGGCGCGGGTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAg < 3:961701/138‑1 (MQ=255)
aTGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCg < 5:89297/138‑1 (MQ=255)
aTGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCg < 3:901855/138‑1 (MQ=255)
aTGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCg < 5:305772/138‑1 (MQ=255)
cGGTCGCGGTTGGTTGCACTACGCGTACCGGTAGCCCGAGTTGTCCGGCGCGCTCCGGCTGCGGCAGGTCAGGCAGGTCAATAAACTGCGTACCGTGCGGGGCACCCAACCGAGGCACGTCACCGCATGCCCGCGGcc > 4:961701/1‑137 (MQ=255)
tCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGc < 6:73484/138‑1 (MQ=255)
gcgTTTGGTTGCACTACGCGTACCGTTAGCCAGAGGTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCa < 3:766052/138‑1 (MQ=255)
gcgTTTGGTTGCACTACGCGTACCGTTAGCCAGAGCTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTGCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATc < 7:821429/140‑1 (MQ=255)
tttGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATcc < 3:766367/138‑1 (MQ=255)
tttGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATcc < 3:44165/138‑1 (MQ=255)
tttGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATcc < 2:720284/138‑1 (MQ=255)
tttGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATcc < 1:607286/138‑1 (MQ=255)
tttGGTTGCACTACGCGTACCGTTAGCCAGAGTGGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATCCAg < 8:79287/140‑1 (MQ=255)
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ATGCAAAAATCCGTTCCGCTGGTGGTCAGTTGAGGGATGGCGTGGGACGCGGAGGGGAGTGTCACGCTGAGGTTTTCCGCCAGACGCCATTGCTGCCAGGCGCTGATGTGTCCGGCTTCTGACCATGCGGTCGCGTTTGGTTGCACTACGCGTACCGTTAGCCAGAGTTGTCCGGCGCTCTCCGGCTGCGGCAGTTCAGGCAGTTCAATCAACTGCTTACCTTGCGGGCCAACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTGCCATCCAG > NZ_CP022686/3935189‑3935463
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
