Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
11 1 1
12 1 1
13 1 1
14 1 1
15 1 1
16 1 1
17 1 1
18 1 1
18 18 18

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 349 498
Multiple Base Substitutions 0 0
Deletions 32 87
Insertions 15 66
Mobile Element Insertions 8 25
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 404 676

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F73 I1 R1 39 0 38.5 1303822 99.3% 1294695 139.0
A2 F73 I1 R1 33 0 29.3 991556 99.1% 982631 138.8
A3 F73 I1 R1 43 0 106.7 3654514 99.2% 3625277 138.9
A4 F73 I1 R1 27 0 126.7 4319836 99.3% 4289597 139.0
A5 F73 I1 R1 24 0 87.4 2961536 99.2% 2937843 138.9
A6 F73 I1 R1 41 0 67.3 2277744 99.2% 2259522 138.7
A7 F73 I1 R1 37 0 62.8 2124542 99.4% 2111794 139.0
A8 F73 I1 R1 37 0 68.4 2336844 99.4% 2322822 139.1
A9 F73 I1 R1 40 0 54.6 1829692 99.4% 1818713 139.2
A10 F73 I1 R1 40 0 29.6 999728 99.2% 991730 139.0
A11 F73 I1 R1 67 0 104.3 3671926 99.4% 3649894 139.1
A12 F73 I1 R1 36 0 68.3 2422800 99.4% 2408263 139.4
A13 F73 I1 R1 38 0 30.8 1067384 99.4% 1060979 139.5
A14 F73 I1 R1 39 0 43.8 1513802 99.3% 1503205 138.9
A15 F73 I1 R1 36 0 69.5 2452810 99.4% 2438093 139.0
A16 F73 I1 R1 30 0 81.0 2876220 99.3% 2856086 139.0
A17 F73 I1 R1 40 0 41.9 1459624 99.2% 1447947 139.1
A18 F73 I1 R1 29 0 74.9 2627920 99.3% 2609524 139.1

Mutation Needle Plot

Mutation Targets

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