mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 67 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 6112813 | 86 (1.000) | 4 (0.050) | 4/338 | NT | 4.7% | intergenic (‑69/‑58) | PP_5363/clsA | conserved exported protein of unknown function/Cardiolipin synthase 1 |
| ? | AE015451 | = 6112818 | 82 (1.000) | intergenic (‑74/‑53) | PP_5363/clsA | conserved exported protein of unknown function/Cardiolipin synthase 1 | |||||
| * | ? | AE015451 | 6070767 = | 101 (1.170) | 3 (0.040) | 3/336 | NT | 3.2% | intergenic (‑123/+40) | PP_5324/phoU | Response regulator/phosphate transport‑associated protein |
| ? | AE015451 | 6070789 = | 89 (1.100) | intergenic (‑145/+18) | PP_5324/phoU | Response regulator/phosphate transport‑associated protein | |||||
| * | ? | AE015451 | = 6041484 | 96 (1.120) | 4 (0.050) | 4/338 | NT | 4.0% | coding (440/723 nt) | rph | Ribonuclease PH |
| ? | AE015451 | = 6041615 | 103 (1.260) | coding (309/723 nt) | rph | Ribonuclease PH | |||||
| * | ? | AE015451 | = 5920565 | 92 (1.070) | 3 (0.040) | 3/346 | NT | 3.3% | coding (1151/1674 nt) | PP_5190 | Type II secretion system protein |
| ? | AE015451 | = 5920579 | 84 (1.010) | coding (1165/1674 nt) | PP_5190 | Type II secretion system protein | |||||
| * | ? | AE015451 | 5822187 = | 100 (1.160) | 4 (0.050) | 3/324 | NT | 4.3% | coding (147/435 nt) | PP_5099 | conserved protein of unknown function |
| ? | AE015451 | 5822203 = | 89 (1.140) | coding (163/435 nt) | PP_5099 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5790883 | 84 (0.980) | 3 (0.040) | 3/340 | NT | 3.6% | coding (835/1065 nt) | hemE | Uroporphyrinogen decarboxylase |
| ? | AE015451 | = 5790885 | 79 (0.960) | coding (833/1065 nt) | hemE | Uroporphyrinogen decarboxylase | |||||
| * | ? | AE015451 | = 5644984 | 103 (1.200) | 3 (0.040) | 3/342 | NT | 2.8% | coding (337/2184 nt) | PP_4954 | conserved membrane protein of unknown function |
| ? | AE015451 | = 5645051 | 110 (1.330) | coding (404/2184 nt) | PP_4954 | conserved membrane protein of unknown function | |||||
| * | ? | AE015451 | = 5638869 | 87 (1.010) | 4 (0.050) | 4/334 | NT | 4.6% | coding (1403/1443 nt) | PP_4949 | putative peptidase, TldD/PmbA family |
| ? | AE015451 | = 5639034 | 86 (1.070) | coding (126/1320 nt) | PP_4950 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 5554400 = | 136 (1.580) | 4 (0.050) | 4/334 | NT | 3.1% | coding (496/546 nt) | PP_4886 | conserved protein of unknown function |
| ? | AE015451 | 5554498 = | 121 (1.500) | coding (398/546 nt) | PP_4886 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5337612 | 80 (0.930) | 3 (0.040) | 3/342 | NT | 3.6% | coding (1062/1443 nt) | PP_4696 | Nitrogen regulation protein NR(I) |
| ? | AE015451 | = 5337614 | 82 (0.990) | coding (1064/1443 nt) | PP_4696 | Nitrogen regulation protein NR(I) | |||||