mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 14 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5926174 = | 71 (1.030) | 3 (0.050) | 3/324 | NT | 4.5% | intergenic (‑30/+98) | gcvT‑II/PP_5195 | aminomethyltransferase/putative Iron ABC transporter, permease protein |
| ? | AE015451 | 5926228 = | 59 (0.900) | intergenic (‑84/+44) | gcvT‑II/PP_5195 | aminomethyltransferase/putative Iron ABC transporter, permease protein | |||||
| * | ? | AE015451 | 5441018 = | 68 (0.990) | 3 (0.050) | 3/322 | NT | 4.3% | coding (1566/1653 nt) | PP_4780 | putative Acyl‑CoA dehydrogenase |
| ? | AE015451 | 5441085 = | 69 (1.060) | coding (1499/1653 nt) | PP_4780 | putative Acyl‑CoA dehydrogenase | |||||
| * | ? | AE015451 | 4960421 = | 72 (1.050) | 3 (0.050) | 3/326 | NT | 4.1% | coding (50/1779 nt) | fliF | Flagellar M‑ring protein |
| ? | AE015451 | 4960435 = | 72 (1.090) | coding (36/1779 nt) | fliF | Flagellar M‑ring protein | |||||
| * | ? | AE015451 | 4946072 = | 73 (1.060) | 3 (0.050) | 3/324 | NT | 4.1% | coding (509/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein |
| ? | AE015451 | 4946103 = | 69 (1.050) | coding (478/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein | |||||
| * | ? | AE015451 | = 4833380 | 59 (0.860) | 3 (0.050) | 3/320 | NT | 4.5% | coding (675/801 nt) | PP_4246 | Periplasmic binding protein |
| ? | AE015451 | = 4833426 | 71 (1.090) | coding (629/801 nt) | PP_4246 | Periplasmic binding protein | |||||
| * | ? | AE015451 | 4383136 = | 108 (1.570) | 5 (0.080) | 5/322 | NT | 5.0% | coding (719/804 nt) | PP_3858 | putative Tail fiber protein |
| ? | AE015451 | 4383173 = | 88 (1.350) | coding (682/804 nt) | PP_3858 | putative Tail fiber protein | |||||
| * | ? | AE015451 | = 4043373 | 56 (0.820) | 3 (0.050) | 3/320 | NT | 4.9% | coding (371/978 nt) | PP_3564 | Transcriptional regulator, AraC family |
| ? | AE015451 | = 4043429 | 63 (0.970) | coding (315/978 nt) | PP_3564 | Transcriptional regulator, AraC family | |||||
| * | ? | AE015451 | = 2532679 | 64 (0.930) | 3 (0.050) | 3/322 | NT | 3.9% | coding (451/531 nt) | PP_2223 | conserved protein of unknown function |
| ? | AE015451 | = 2533246 | 86 (1.320) | coding (101/366 nt) | mrpG | putative Multicomponent potassium‑proton antiporter, subunit G | |||||
| * | ? | AE015451 | = 1901548 | 87 (1.270) | 3 (0.050) | 3/320 | NT | 3.5% | coding (2099/4026 nt) | PP_1703 | assimilatory nitrate reductase/sulfite reductase |
| ? | AE015451 | = 1901589 | 84 (1.290) | coding (2140/4026 nt) | PP_1703 | assimilatory nitrate reductase/sulfite reductase | |||||
| * | ? | AE015451 | 844628 = | 87 (1.270) | 3 (0.050) | 3/318 | NT | 4.1% | coding (215/603 nt) | PP_0727 | conserved protein of unknown function |
| ? | AE015451 | 844674 = | 60 (0.930) | coding (169/603 nt) | PP_0727 | conserved protein of unknown function | |||||