mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 24 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5965018 = | 92 (1.290) | 3 (0.040) | 3/330 | NT | 3.3% | coding (212/696 nt) | had | putative (S)‑2‑haloacid dehalogenase |
| ? | AE015451 | 5965067 = | 87 (1.290) | coding (261/696 nt) | had | putative (S)‑2‑haloacid dehalogenase | |||||
| * | ? | AE015451 | 5916382 = | 61 (0.850) | 3 (0.040) | 3/334 | NT | 4.3% | coding (445/1143 nt) | argE | acetylornithine deacetylase |
| ? | AE015451 | 5917106 = | 75 (1.100) | coding (164/1368 nt) | ygiF | putative thiamine triphosphatase | |||||
| * | ? | AE015451 | = 5840614 | 94 (1.320) | 4 (0.060) | 4/336 | NT | 4.1% | intergenic (‑34/+2) | sseA/PP_5119 | putative 3‑mercaptopyruvate sulfurtransferase/Transcriptional regulator, TetR family |
| ? | AE015451 | = 5840623 | 98 (1.430) | coding (659/666 nt) | PP_5119 | Transcriptional regulator, TetR family | |||||
| * | ? | AE015451 | 5650169 = | 90 (1.260) | 3 (0.040) | 3/330 | NT | 3.4% | coding (1024/2127 nt) | PP_4959 | diguanylate cyclase |
| ? | AE015451 | 5650216 = | 84 (1.250) | coding (977/2127 nt) | PP_4959 | diguanylate cyclase | |||||
| * | ? | AE015451 | = 5378518 | 74 (1.040) | 3 (0.040) | 3/328 | NT | 4.5% | coding (103/1674 nt) | recN | factor used in recombination and DNA repair |
| ? | AE015451 | = 5378861 | 59 (0.880) | coding (446/1674 nt) | recN | factor used in recombination and DNA repair | |||||
| * | ? | AE015451 | = 4911042 | 69 (0.970) | 3 (0.040) | 3/332 | NT | 4.3% | coding (670/1197 nt) | cycH | cytochrome c‑type biogenesis protein |
| ? | AE015451 | = 4911129 | 67 (0.990) | coding (583/1197 nt) | cycH | cytochrome c‑type biogenesis protein | |||||
| * | ? | AE015451 | = 4791897 | 68 (0.950) | 3 (0.040) | 3/334 | NT | 4.0% | coding (1943/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
| ? | AE015451 | = 4791939 | 80 (1.170) | coding (1901/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) | |||||
| * | ? | AE015451 | = 4417302 | 73 (1.020) | 4 (0.060) | 4/330 | NT | 4.9% | coding (195/552 nt) | PP_3905 | Transcriptional regulator, LuxR family |
| ? | AE015451 | = 4417570 | 86 (1.280) | coding (463/552 nt) | PP_3905 | Transcriptional regulator, LuxR family | |||||
| * | ? | AE015451 | = 4355162 | 70 (0.980) | 3 (0.040) | 3/334 | NT | 4.2% | coding (362/681 nt) | modB | Molybdenum transport system permease protein ModB |
| ? | AE015451 | = 4355227 | 69 (1.010) | coding (427/681 nt) | modB | Molybdenum transport system permease protein ModB | |||||
| * | ? | AE015451 | = 4244769 | 78 (1.090) | 3 (0.040) | 3/334 | NT | 3.9% | coding (252/1191 nt) | aruH | Arginine‑‑pyruvate transaminase AruH |
| ? | AE015451 | = 4244795 | 74 (1.090) | coding (226/1191 nt) | aruH | Arginine‑‑pyruvate transaminase AruH | |||||