Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F200 I0 R1
|
101 |
105.4 |
5209919 |
94.4% |
4918163 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 96.3%
| 369.1
/ 6.2
| 109 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/1); new base A (68/37); total (71/38) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 128 total aligned reads displayed.
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑A‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑Att < 2:695221/100‑1 (MQ=255)
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑Att < 1:2187561/100‑1 (MQ=255)
tCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a < 2:2250062/100‑1 (MQ=255)
tCTGATGAAGATCGACTTCCCTGGCTGGAACGCGTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a < 1:864994/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aa < 2:839805/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aa > 1:2173999/1‑100 (MQ=255)
ngatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aa > 1:1178330/2‑100 (MQ=255)
gatgaCGATCGAGTCACCTGGCTGGAACGCTTAACTGATTCCTGATACAGTCGTTATGAAACGAATGACACAGGATTTACTGTCAGTGCATC‑ATT‑a‑a‑aaa > 2:2324699/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaa > 1:354369/1‑100 (MQ=255)
ttccgATCTACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaaaa < 2:592719/96‑1 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaaaaac < 2:953529/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATA‑ATT‑a‑a‑aaaaaac < 2:854910/100‑3 (MQ=255)
aaGATCGAATTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaaaaac < 2:367092/100‑3 (MQ=255)
ngATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaaaaaca > 2:1316002/2‑97 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaaaaaca > 2:603510/1‑97 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaaaaaaca > 2:1693587/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑A‑ACAAAAACAg > 1:2434220/1‑100 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑a‑a‑aaaaaagatcggaa > 1:592722/1‑91 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGt > 1:1810010/1‑100 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGt > 1:1809758/1‑100 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGt > 1:1984120/1‑100 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGt > 2:2555320/1‑100 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGt > 2:1990700/1‑100 (MQ=255)
ttgccTGGCTGGAACGCTTGAATCGTGCTGCATACAGGCGTTAGAAAAATAACGAAGCAGGATTTATTGTCTCTTCATC‑ATT‑a‑a‑aaaaaac < 2:2239347/88‑3 (MQ=255)
cccTGGCTGGAACGCATAAATGATACTTCATACAGTCTTTCTAAAAAGAAGGAAACAGGATTTATTATCTGTTTATC‑ATTAA‑A‑AAAAACAGTATc > 2:1642671/1‑95 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGata > 1:154151/1‑100 (MQ=255)
tggctggAACGATTAAATGATGCTTCATACAGTCATTATAAAAAGAATGAAACAGGATTTATTGTCTAAAAAAA‑AAA‑A‑A‑AAAAACAGTATCGTGATAttt < 2:804556/100‑1 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATAtttt < 1:985414/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTAc > 2:245213/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACg > 1:1032039/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACg > 2:336535/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACg > 1:1392890/1‑100 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCacg > 1:708196/1‑98 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAg < 1:1850590/100‑1 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAgg < 1:1563627/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAggg > 2:996030/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTAATTGTCTGTTCATA‑ATTAA‑A‑AAAAACAGAATCGTGATATTTTACGCAAggg > 2:625175/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTa > 1:2010171/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTAATA‑ATTAA‑A‑AAAAACGGTATCGTGATATTTTACGCAAgg > 2:79779/1‑97 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc > 2:1964728/1‑100 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGcccc < 1:1047188/100‑1 (MQ=255)
tgCTTCATACAGAATATATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:1667507/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCaa > 2:957309/1‑99 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:1371448/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:2492418/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑ACA‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:1831374/1‑100 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGt < 1:877717/100‑1 (MQ=255)
tcctACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTTTTCATCAATA‑A‑A‑AAAAAAAGCATTTTGATATTTTACGCAAGGGTAGCCTCCATAtt > 2:1810396/4‑100 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 1:477678/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:483723/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:1541343/1‑100 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:914537/1‑99 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 1:1410260/1‑100 (MQ=255)
ttCTTTTTATAAAGACTGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 1:1304640/2‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 1:1910714/100‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCAGC‑ATTAA‑A‑AAAAACAGTATCATGTTATTTTACGTATGGCTAGCTTCCATGTTCATTTcc > 2:1480988/1‑100 (MQ=255)
tCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct > 1:2369888/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTActct > 2:1865224/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTATGTTAATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 2:1687208/99‑1 (MQ=255)
atcttaAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 2:2417013/96‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 2:2267583/1‑100 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTATTAAAA‑AAAAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 2:1046056/100‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 2:2248184/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 1:95280/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa < 1:2330787/100‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:1868431/1‑100 (MQ=255)
aaaaGAATGAAACAGGATCTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGACCCCATGTTCATTTCCTCTGATTa > 2:2201907/1‑99 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 1:643693/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 1:2428842/100‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 1:1347160/100‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 2:625736/100‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg > 1:642710/1‑100 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCAGC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 2:2452981/99‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 2:1116336/100‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 1:1960673/100‑1 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 1:45482/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa < 1:2531633/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg > 1:2366113/1‑98 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:45482/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCGATGTCCATTCCCTCTGGTTAGATGGGGACt > 1:1430095/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:2173987/99‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:1655874/1‑100 (MQ=255)
aCAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt > 2:2031996/1‑100 (MQ=255)
aCAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt < 2:85730/100‑1 (MQ=255)
aCAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt > 1:1423775/1‑100 (MQ=255)
cAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg < 1:422532/100‑1 (MQ=255)
cAGGATTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg > 2:1337959/1‑100 (MQ=255)
aTTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:2388671/100‑1 (MQ=255)
aTTTATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:830638/100‑1 (MQ=255)
tttATTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCATCTGGTTAGATGGCGACTATGAAAc < 2:256573/99‑1 (MQ=255)
aTTGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 1:1056292/1‑100 (MQ=255)
tGTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 1:1196353/1‑100 (MQ=255)
gTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc < 1:1298467/100‑1 (MQ=255)
gTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:1086005/1‑100 (MQ=255)
gTCTGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGACCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:434452/1‑100 (MQ=255)
tGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:1046294/1‑100 (MQ=255)
tGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 1:1800729/100‑1 (MQ=255)
tGTTCATC‑ATTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 1:795229/1‑100 (MQ=255)
tcatc‑aTTAA‑A‑AAAAACAGTATCGTGATATTTTCAGCAAGCGTAGCCCCCATATTCATTTCATATGGTTACATAGCGACTATGAAACTATTCTcgccc > 2:2239054/1‑96 (MQ=255)
atc‑atTAA‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt > 2:1338395/1‑100 (MQ=255)
|
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑A‑A‑AAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
