Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F232 I0 R1
|
243 |
156.3 |
7646460 |
93.8% |
7172379 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 94.2%
| 460.2
/ 19.2
| 138 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/5); new base A (68/62); total (71/67) |
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 165 total aligned reads displayed.
TCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494779‑4494970
|
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaa > 2:2724620/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaa > 2:247533/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaa < 1:2354640/100‑1 (MQ=255)
tgatgaAGATCGACTTCCGTGGCTGTAACGCTTAAATGATGCTTCATAAAAAAATAATAAAAAGAATGAAACAGGATTTCTTGTCTGTTCATCATT‑‑aaaa < 2:2340879/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAGAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa > 2:3421000/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑a > 2:3562678/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaa < 2:3116205/100‑1 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACA‑GATTTATTGTCTGTTCAACATT‑‑aaaa‑aaaa > 2:3631279/1‑99 (MQ=255)
gaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaa > 1:3411702/1‑99 (MQ=255)
cgatctgACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaac < 1:1246961/94‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaac < 2:2554045/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaac > 2:3822630/1‑98 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaac < 1:3051988/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaaca < 2:3059093/100‑4 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaac < 2:2165027/99‑3 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaagcag > 2:286900/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa‑aaaacag > 1:3154165/1‑96 (MQ=255)
cGACTTCACTGGCTGGAAAGCTTAAATGATACTTCATACAGTCTTTATAAAAAGAATGAAACAGTATTTATTGTATGTTAATCATT‑‑aaaa‑aaaacagt < 2:3441692/98‑6 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATc > 2:1266174/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTAGTGTCTGTTCATCATTA‑AAAA‑AAACAGTaac > 1:1632776/1‑98 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCg < 1:923703/100‑1 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCg < 1:804308/100‑1 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGt < 1:292306/100‑1 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGa < 1:395620/100‑1 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGata > 1:3454565/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGatat > 2:2906436/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGata > 2:2281814/1‑99 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATAttt > 1:1759346/1‑100 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATAttt > 1:3413739/1‑100 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATAttt < 1:1282773/100‑1 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTa > 2:3757891/1‑100 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTAc < 1:1759136/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTAAAAAAAAA‑AAAA‑AAACAGTATCGTGATATTTTAc < 2:2109591/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACg > 2:2284511/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACg < 1:459709/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACg > 2:68362/1‑100 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTAc < 2:3476875/98‑1 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCa > 1:1419871/1‑100 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAg < 1:2691977/100‑1 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACg > 2:3676272/1‑95 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAggg > 2:109640/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAggg > 1:1021579/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCACCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAggg < 1:2299071/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATAAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAggg > 2:2033809/1‑100 (MQ=255)
ttAAATTATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATGTTTTACGCAAggg < 2:891910/99‑1 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAgggn < 2:1164110/99‑2 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTa > 2:3179565/1‑100 (MQ=255)
aaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGc > 2:3347292/1‑100 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGcc > 1:2879029/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGccc < 2:1633942/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:507155/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:2654979/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa > 2:1598855/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:3288991/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 1:736862/1‑100 (MQ=255)
cTTCATACATGGTTTATAAAAAGAATGAAACAGTATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:1880970/98‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTTATCATTAAAAAA‑AAAAAGTATCGTGATATTTTACGCAAGGGTAGcgccaa > 2:792217/1‑97 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc > 2:3764604/1‑100 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc > 2:956357/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt < 1:2131931/100‑1 (MQ=255)
acaatatttATAAAAAGAATGAAACAGGACTTATTGTCTGTTCAACATT‑‑AAAACAAACAGTATCGTGATATTTTACTCACGGGTAGCCCCCTTGTTCAtt < 2:1055685/94‑1 (MQ=255)
aCAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTATCCCCCATGTTCAtt > 2:693735/1‑100 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc < 2:3333108/100‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTTATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 2:1794149/1‑100 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 1:141237/100‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 1:286901/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTATGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:3625559/100‑1 (MQ=255)
naaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 2:418714/2‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa < 1:2395819/100‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 1:1889572/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:2839479/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGAGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:3555419/1‑99 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTATGTTCATCATT‑‑AAAACAAACAGTATCGTGATATTCTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa < 2:3810391/99‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg > 2:3688051/1‑100 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc < 1:2640921/100‑1 (MQ=255)
aaTGAAACAGAATTTATTTTCTGGTCATAATTA‑AAAA‑AAACAGTAT‑ATGATATTTTACGCACGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 2:1707889/97‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 2:1759336/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACCGTATCGTGATATTTTACGCAAGGGTAGCTCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 1:3626106/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 1:3283141/100‑1 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:218303/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 1:789508/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 2:905138/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 1:579772/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa > 1:3517182/1‑100 (MQ=255)
ggATTTATTGTCTGTTCATCATTAAAAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTGTGa > 1:3473690/1‑100 (MQ=255)
ggATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa < 2:3290341/100‑1 (MQ=255)
gATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaaa > 1:2826352/1‑100 (MQ=255)
gATTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa > 2:2710651/1‑99 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:1930033/100‑1 (MQ=255)
tttATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACt < 2:2616204/100‑1 (MQ=255)
tATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt > 1:1386042/1‑100 (MQ=255)
tATTGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt > 2:3153623/1‑100 (MQ=255)
tGTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 1:1004516/1‑100 (MQ=255)
gTCTGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:1010110/1‑100 (MQ=255)
tGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 1:247533/100‑1 (MQ=255)
tGTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACACAAGGGTAACCCCAATGTTCATTTACGATGGTTAGATGGCGACTATGAAACTATTCTcgc > 2:2145305/1‑99 (MQ=255)
gTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc < 1:3420336/100‑1 (MQ=255)
gTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:3329499/1‑100 (MQ=255)
gTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:3094679/1‑100 (MQ=255)
gTTCATCATTA‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGACCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 2:1545455/1‑100 (MQ=255)
|
TCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494779‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
