Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F191 I0 R1
|
105 |
142.7 |
6924153 |
96.8% |
6702580 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 95.8%
| 416.1
/ 9.2
| 119 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (4/1); new base A (55/59); total (59/60) |
| Fisher's exact test for biased strand distribution p-value = 2.07e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494778‑4494970
|
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a > 2:755336/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa < 2:1141374/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa < 2:1067444/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACGGGATTTATTGTCTGTTCATCATT‑‑a‑aaa > 2:370998/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaa > 1:922110/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaa > 1:624189/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaa > 1:126987/1‑100 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 1:2667152/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaaca > 2:2259313/1‑97 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaacag > 1:496084/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaacag > 1:496047/1‑96 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaacagt > 2:3393508/1‑95 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaaca > 1:1115466/1‑95 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTa > 2:537525/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATc > 2:3338890/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATc > 2:3115287/1‑100 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAATCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGa < 1:1053393/100‑1 (MQ=255)
ccatggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGa < 1:3185006/96‑1 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGata > 2:2766388/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGata < 2:2773868/100‑1 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGatat > 1:1657286/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGatat < 1:3225248/100‑1 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATAtt > 2:189303/1‑100 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATAtt > 1:2416737/1‑100 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATAttt > 1:929598/1‑100 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTa > 1:1069966/1‑100 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGc < 1:1797452/100‑1 (MQ=255)
gAACGCTTAAATGATGCTTCATAAAAAAATAATAAAAAGAATGAAACGGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACg < 1:370995/99‑1 (MQ=255)
aaCGCTTAAATGATTCTTCATAAAAAAAAAAAAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATAtt < 1:2321036/93‑1 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCa < 2:2058456/100‑1 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCa < 1:1895277/100‑1 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCa > 2:580288/1‑100 (MQ=255)
aCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCaa < 2:78315/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCa > 1:607420/1‑98 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAg < 1:203639/100‑1 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTGTAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAgg > 2:179076/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAggg > 1:982260/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAgg > 2:782903/1‑99 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTa > 2:1422513/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGt < 2:1331962/98‑1 (MQ=255)
aaTGATGCTTCATACAGTCTTTATAAAAAGAATGAATCAGGATTTATTGTCTGTTCATCATTAAA‑AAAAAA‑CAGAATCTTGACATTGCACGCACGGGTa > 1:2105564/1‑99 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGcc > 1:2842090/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccc > 2:2474935/1‑100 (MQ=255)
atgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccccc > 1:1983424/1‑100 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa > 2:46490/1‑100 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:3360087/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt < 2:1289061/100‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:2803398/1‑99 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 2:921969/100‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 2:402510/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:1590255/100‑1 (MQ=255)
ttCATATAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGt < 1:2875086/100‑1 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa < 2:2135679/100‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTTATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:2485088/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt < 2:2712807/100‑1 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt < 1:2118939/100‑1 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 1:1645181/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 1:2049524/1‑100 (MQ=255)
cTTTATACAAAAAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATAATTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 1:1823024/1‑100 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct > 1:3122814/1‑99 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 1:1404466/100‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 2:210521/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:2394394/100‑1 (MQ=255)
cttaAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:3041392/98‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTTATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 1:2930468/100‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTggag > 2:3041416/1‑98 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 2:2870765/100‑1 (MQ=255)
aaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 2:1293792/100‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCGTCATT‑‑A‑AAAAAAGCAGTATTGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt > 1:1989610/1‑98 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg > 2:2660265/1‑100 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg > 2:547274/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa < 1:1479587/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 1:2749965/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 1:716530/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:1412325/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 1:2196925/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCTTGATATTTTACGCAAGGGGAGCCCCCATGTTCATTTCCTCTGGGTAGATGGCGACt > 2:1889133/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:701144/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt < 1:2523950/100‑1 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt < 2:1307110/100‑1 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt < 1:402507/100‑1 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt > 1:1433881/1‑100 (MQ=255)
cAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg > 2:2987666/1‑100 (MQ=255)
cAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg < 2:3215130/100‑1 (MQ=255)
ggATTTATTGTCTGTTCATCATT‑‑ACAAAAAC‑CAGTATCGTGATATTTTATGCAAGGATAGCCACCATGTTCATTTCCTATGGTTAGATGGCGACTATGa > 1:3361101/1‑99 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:1549074/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:1322595/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATCTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:2210984/100‑1 (MQ=255)
tATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt > 1:1404469/1‑100 (MQ=255)
tGTCTGTTCATCATTAAA‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATATTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 1:2062155/1‑99 (MQ=255)
gTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:2548106/1‑100 (MQ=255)
tCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg < 1:1177800/100‑1 (MQ=255)
tCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTGTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg < 2:2432471/100‑1 (MQ=255)
cTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc < 2:912575/100‑1 (MQ=255)
cTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc > 1:3348993/1‑100 (MQ=255)
tGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 2:1983441/100‑1 (MQ=255)
ttCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTTTcgcgcg < 2:1823040/100‑1 (MQ=255)
ttCATCATT‑‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGa < 2:624193/100‑1 (MQ=255)
atcatTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt > 1:363134/1‑100 (MQ=255)
tcatTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg > 1:2676388/1‑100 (MQ=255)
|
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494778‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
