Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F191 I1 R1
|
67 |
105.9 |
5535243 |
92.7% |
5131170 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883 |
(A)7→8 |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 96.0%
| 351.5
/ 5.8
| 103 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/1); new base A (59/38); total (64/39) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 122 total aligned reads displayed.
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAT > NC_000913/4494778‑4494969
|
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a < 2:88905/100‑1 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a < 1:2285677/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa > 2:385135/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaa < 2:2603602/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaa > 2:1295889/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaa < 1:641183/100‑1 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaa < 1:719871/100‑1 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaa > 1:2707931/1‑100 (MQ=255)
aaGATGGAGTTACATGGCTGGAAGGCTTAAATGATGCTGCAGACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 2:2414186/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac > 1:1329852/1‑98 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 1:138175/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 1:447570/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 2:1431903/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaaca > 2:754815/1‑97 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaacag < 1:305555/100‑5 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaacag < 1:991147/100‑5 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaacag > 2:1229038/1‑96 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATc > 1:323098/1‑100 (MQ=255)
aCTTGCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTAGAAAAAGAATGAAACAGAATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTa < 1:304831/97‑1 (MQ=255)
cTTCCCTTGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCg < 2:1224481/99‑1 (MQ=255)
ttCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑AAGTATCGt > 2:174537/1‑99 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGata > 2:1027566/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGata > 2:1832184/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGatat > 1:249602/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGata > 1:1137541/1‑99 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTa > 1:1564782/1‑100 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTAc < 1:878372/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTC‑A‑AAAAAA‑CAGTATCGTGATATTTTACg > 2:771166/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACg < 1:255239/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACg > 1:1069807/1‑100 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGc < 2:847304/100‑1 (MQ=255)
gAACGATTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGc < 2:1372719/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTG‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAg > 2:1856560/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTTGGCATGGGt > 2:120993/1‑99 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTa > 2:2450816/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTa > 1:2141449/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAg < 2:696906/100‑1 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGc > 2:2385799/1‑99 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccc > 1:2282488/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccc > 2:2699776/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccc > 2:1107800/1‑100 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGcccc > 1:1814175/1‑100 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGcccc > 1:2281719/1‑100 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAGT‑‑AGAAAAAA‑AAGTATCGTGATATTTTACGCAAGGGTAGcccc > 2:1937917/1‑100 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:2048275/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:2039031/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:328796/100‑1 (MQ=255)
ttCATCTAGTGTTTATAAAAAGAATGAAACAGGATTTAGTGTCTGTTCATCATT‑‑A‑AAAAAAGCAGTAGTGTGATATTTTACGCAAGGGTAGCCCCCAttt < 2:915456/100‑3 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGCTTTATTGTCTGTTCATCATTAAA‑AAAAAA‑CAGTAACGTGATATTTTACGCAAGGGTAGCCCCCATg > 1:743691/1‑100 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 1:1321824/100‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGCAGCCCCCATg > 1:1581152/1‑97 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 2:2393179/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGCTATTTTACGCAAGGGTATCCCCCATGTTCAt < 1:1856575/100‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:2584217/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCAt > 2:1099800/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:2648013/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 1:2669728/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 2:1387337/1‑100 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 2:901156/100‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 1:1335963/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 1:1229045/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGAGTAACCCCCATGTTCATTTCCTCTGGt > 2:672307/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:1144764/1‑100 (MQ=255)
taAAAAAAATGAAACAGGATTCATTTTCTGTTTATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtn < 2:1141617/100‑2 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 1:2600181/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:1193479/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:890471/1‑99 (MQ=255)
ccgatctaaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 2:769764/93‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc < 1:1832199/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc > 2:24075/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CCGTATCGTTATTTTTTAATCAAAGGGAACCCCCATGGTTATTTTCTTCGGTTAGATTGCGa > 2:2334814/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa < 2:624077/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTAAA‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCCTGCACATTTCCTCTCGTCAGGTgggt > 2:896157/1‑97 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:164307/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 2:2262030/100‑1 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTAAA‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:938975/100‑1 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt > 2:144711/1‑100 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt > 2:196640/1‑100 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAAGCAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATATTCATTTCCTCTGGTTAGATGGCGACTa > 2:1666884/1‑99 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 2:1581140/100‑1 (MQ=255)
ggATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa < 2:2584198/100‑1 (MQ=255)
gATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATGTCCTCTGGTTAGATGGCGACTATGaaa > 2:864443/1‑100 (MQ=255)
gATTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCACCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaaa > 2:1114278/1‑100 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:1662631/100‑1 (MQ=255)
tATTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt > 2:1303820/1‑100 (MQ=255)
aTTGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGAGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 2:2478123/1‑100 (MQ=255)
ttGTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtc > 1:1354711/1‑100 (MQ=255)
gTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:1983589/1‑100 (MQ=255)
gTCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:2115014/1‑100 (MQ=255)
tCTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg > 2:236278/1‑100 (MQ=255)
cTGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc < 2:1564770/100‑1 (MQ=255)
tGTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 1:2128195/100‑1 (MQ=255)
gTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:1634837/1‑100 (MQ=255)
gTTCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:1900025/1‑100 (MQ=255)
ttCATCATTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 2:173171/100‑1 (MQ=255)
tcatcaTTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGa > 2:1362668/1‑100 (MQ=255)
catcatTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:1983033/1‑100 (MQ=255)
catcatTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGACCCCATGTTCATTTCATATGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 2:526543/1‑100 (MQ=255)
atcatTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt < 2:1983016/100‑1 (MQ=255)
atcatTA‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt > 1:322888/1‑100 (MQ=255)
|
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAT > NC_000913/4494778‑4494969
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
