Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F183 I1 R1
|
63 |
136.1 |
6714777 |
94.6% |
6352179 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883 |
(A)7→8 |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 85.0%
| 285.3
/ 43.0
| 93 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (8/6); new base A (45/34); total (53/40) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 108 total aligned reads displayed.
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494778‑4494970
|
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAAGAGGATTTATTGTCTGTTCATCA‑TT‑a > 2:2801241/1‑100 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑tt > 2:2960309/1‑99 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaa < 1:464916/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaa > 2:297480/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaa < 2:1488649/100‑1 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaaa > 2:3348749/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaaaa < 1:1890219/100‑1 (MQ=255)
gaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaaaaa > 2:2764158/1‑99 (MQ=255)
gaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAAc < 1:817073/100‑1 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaaaaac < 2:1284820/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaaaaac < 1:2670248/100‑3 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaaaaacagt > 1:2891907/1‑95 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑aaaaaaaaacag < 1:2699070/100‑6 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTAATAa‑aa‑aaaaaaaaacag < 2:3118107/100‑6 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTa > 2:1178848/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATc > 1:1101333/1‑100 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCg < 2:417864/100‑1 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCg < 1:44628/100‑1 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGt > 1:370156/1‑100 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGat < 2:3233535/100‑1 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGatat < 1:1892653/100‑1 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATAtttt < 1:1685924/100‑1 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTAc > 2:3221332/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTa > 2:3003600/1‑98 (MQ=255)
taaaatttAAATAATGCTTCATACATTCTTTAAAAAAAGAATGAAATAGTATTTATAGTCTTTTTATAA‑TTAAAAAAAACAGTATCGTGATATTTTACg < 2:751793/93‑1 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGc > 1:530468/1‑100 (MQ=255)
cGCTTAACTGAGGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCG‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAAgg > 2:1767378/1‑100 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAg < 1:3268501/100‑1 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAg > 2:2181214/1‑99 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAggg > 1:2762394/1‑100 (MQ=255)
ttAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGt < 2:3036053/100‑1 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAg > 1:290950/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAg < 1:2365047/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGcccc > 1:3257846/1‑100 (MQ=255)
atgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGccccc < 2:1399479/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGGAACGTGATTTTTTTCGCAAGGGTAGCCCCCAt > 1:2660744/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:1970869/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAACGAAACAGGATCTATTGTCTGTTCACCA‑TT‑CAAAAAACAGTATCGTGATATTTTACGAAAGGGTACCCCCCATg > 2:1119648/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 1:2615789/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGAGTAGCACCCATg > 2:2958263/1‑100 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 2:1399094/99‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 2:756869/100‑1 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 2:1177324/1‑100 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 1:2868651/1‑100 (MQ=255)
aCAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAtt > 2:18280/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt < 1:1178852/100‑1 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGCTTTATTGTCTGTTCATAA‑TTAAAAAAAACAGTGTCGTGATATTTTACGGAAGGATAGCCCCCATGTTCAttt > 2:407874/1‑99 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTTTTTATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTc > 2:1803356/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 1:1970877/100‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCAttt > 2:2815765/1‑98 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 1:387666/100‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 1:1142221/100‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 2:1257339/1‑100 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct > 1:151616/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTGTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 2:2623874/99‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 1:2321295/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:818324/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg > 1:1075551/1‑99 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 2:222474/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 1:1385047/100‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:1319874/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTCCTCTGGTTa > 2:482395/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:12367/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:1078140/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:3167743/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg < 1:2947837/100‑1 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:2440442/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:3297545/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCACGTTCATTTCCTCTGGTTAg > 1:985427/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 1:286307/100‑1 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 2:151615/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 2:2911827/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 2:859463/100‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAATGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 2:672462/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa < 1:2528664/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:1319870/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:3139275/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:343693/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:1700664/100‑1 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa > 1:2810008/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:2181225/100‑1 (MQ=255)
cAGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg > 2:2574406/1‑100 (MQ=255)
aGGATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa > 1:3293002/1‑100 (MQ=255)
ggATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa < 2:3257828/100‑1 (MQ=255)
ggATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa > 2:2610098/1‑99 (MQ=255)
gATTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaaa > 2:2890082/1‑100 (MQ=255)
aTTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:3298583/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc > 2:2667319/1‑100 (MQ=255)
tATTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt > 2:2984988/1‑100 (MQ=255)
aTTGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 2:567378/1‑100 (MQ=255)
tGTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 2:1782174/1‑100 (MQ=255)
gTCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:1101884/1‑100 (MQ=255)
tCTGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg > 1:2718658/1‑100 (MQ=255)
tGTTCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 1:470962/1‑100 (MQ=255)
ttCATCA‑TTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 2:2615777/100‑1 (MQ=255)
ttCATCA‑TTAAAAAAAACAGTATCCTGTTAATTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 2:746067/98‑1 (MQ=255)
catca‑tTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg > 2:3001195/1‑98 (MQ=255)
catca‑tTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:1219149/1‑100 (MQ=255)
catca‑tTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:2123145/1‑100 (MQ=255)
tca‑tTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg < 1:1275935/100‑1 (MQ=255)
|
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCA‑TT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494778‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
