Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F232 I1 R1
|
72 |
114.8 |
5816246 |
94.5% |
5496352 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883 |
(A)7→8 |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 96.8%
| 422.5
/ 5.4
| 124 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base A (63/57); total (65/59) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 |
Only 100 of 145 total aligned reads displayed.
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAtt < 2:1144915/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa < 1:1456205/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCGGTTCATCATT‑‑a‑aa > 2:26073/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaa > 2:2150022/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaa > 2:2558144/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaa > 2:834602/1‑100 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaa < 2:594072/100‑1 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaa > 2:1648955/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaa > 1:602681/1‑100 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 1:1659013/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 2:1427626/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 2:624959/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaac < 2:2472463/100‑3 (MQ=255)
aaGATCGACTTCCCTAGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCAGCATT‑‑a‑aaaaaaac < 1:1797790/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaaac < 2:1273932/100‑4 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aaaaaaacag < 1:1587379/100‑5 (MQ=255)
cGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTAt < 1:1623789/100‑1 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCg < 1:2554698/100‑1 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCg < 2:2056774/100‑1 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGCAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCg > 2:932942/1‑99 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGt > 1:2251337/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGata > 2:402388/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGata > 1:2102461/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGatat > 1:2789161/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGatat > 2:1803281/1‑100 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATAtt < 1:2859878/100‑1 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATAtt < 2:259596/100‑1 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATAtt > 1:1401093/1‑100 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTa > 2:2796197/1‑100 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTAc < 2:1229427/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACg < 2:2106888/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAg > 2:906728/1‑100 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAgg > 2:4381/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAggg < 1:2557053/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAggg > 1:315984/1‑100 (MQ=255)
ttAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGt < 2:602687/100‑1 (MQ=255)
tAAATGATGCTTCATACAGTCTTTCTAAAAAGAATGAAACAGGTTTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTCTTGTGATATTTTACGCCAAGGt > 1:924489/1‑99 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTa < 2:2637595/100‑1 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTa > 2:2151614/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAg > 1:656789/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAg > 1:2237532/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAg > 2:806866/1‑100 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGACACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGAAAGGGTAg > 2:1045967/1‑98 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:858828/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAA‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:636917/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:1599598/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAATAGGATTTATTGTCTGTTAATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:489523/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 2:1074673/100‑1 (MQ=255)
tACAGTCTTTGTAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACTGTATCGTGATATTTTACGCAAGGGAAGCACCCAGGTTCAt > 1:820235/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 1:49769/1‑99 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 2:2214883/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:1498835/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:981688/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:2618283/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCAGCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt < 1:2771420/100‑1 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTAAttt > 1:1263108/1‑99 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 2:695260/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 1:877007/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 1:877313/1‑99 (MQ=255)
tCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAA‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 1:1467398/100‑1 (MQ=255)
tCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct < 1:2537339/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct > 1:2087464/1‑100 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCATGTCTACACCCCATGTTCATTTCCTCTg > 1:1379661/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg > 1:949079/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:688076/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 2:2571706/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 2:2545544/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 1:2585939/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:69409/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 1:1194706/100‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:1050051/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 1:1406782/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:1267855/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTCCTCTGGTTAg > 1:433565/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa > 2:439117/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 2:1037511/100‑1 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑ACAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa > 1:1556342/1‑100 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 1:1689546/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc < 1:142514/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc < 1:898460/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTCCTCTGGTTAGATGGc > 1:1837519/1‑100 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg > 1:325010/1‑100 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGCAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 1:1046472/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:2605808/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:1950602/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:1092225/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAcca > 1:1760518/1‑98 (MQ=255)
ggATTTATTGTCTGTTCATCATTAAA‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 2:335894/100‑1 (MQ=255)
ggATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa < 2:656795/100‑1 (MQ=255)
ggATTTATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa < 1:740256/100‑1 (MQ=255)
tttATTGTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACt < 1:2851611/100‑1 (MQ=255)
gTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc < 1:662570/100‑1 (MQ=255)
gTCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:1268904/1‑100 (MQ=255)
tCTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg < 1:106511/100‑1 (MQ=255)
cTGTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc > 1:1145810/1‑100 (MQ=255)
gTTCATCATTA‑A‑AAAAAACAGTATCGTGATATTTTACGAAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:1795353/1‑100 (MQ=255)
tcatcaTTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGa > 1:1895974/1‑100 (MQ=255)
tcatcaTTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGa > 2:1783798/1‑100 (MQ=255)
catcatTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa < 2:152858/100‑1 (MQ=255)
tcatTA‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg < 2:383815/100‑1 (MQ=255)
|
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
