Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 92.0%
| 473.1
/ 32.5
| 150 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/9); new base A (78/60); total (81/69) |
| Fisher's exact test for biased strand distribution p-value = 6.62e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 174 total aligned reads displayed.
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAA > NC_000913/4494777‑4494968
|
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTTTAAAAAGAATGAAACAAGATATATTGTCTGATCACAATT‑‑a > 1:2595724/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aa < 2:2100165/99‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa < 1:3129866/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaa > 2:2972599/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGACAGGAACGCTTAAATGATGCTTCATACAGTCTCTCTAAAAAGAATGAAACAGGATTTATTGTCTGTTCCTCATT‑‑a > 2:1288065/1‑97 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa > 2:2481638/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaa > 1:1581420/1‑100 (MQ=255)
aaGATCGTTTTTCCTGGCTGGAACGCTTAAATGATGCTTCATAAAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaac < 1:206573/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaac < 1:1793318/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaac > 2:2534036/1‑98 (MQ=255)
aGATCGACTTCCCTGGCTGGAATGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaaca < 1:3811230/100‑4 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaaca < 1:1112061/100‑4 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTATCTATTCATCATT‑‑aaaaaaaaca > 1:1554151/1‑97 (MQ=255)
gATCGACTTCCCTGGCTGGAACGTTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaagaaca < 2:3518117/99‑6 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaacag < 2:2821785/100‑5 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAGATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaacag < 2:2658717/99‑5 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaacagt > 2:3822717/1‑95 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaacagaat > 1:904684/1‑92 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCg > 2:1237884/1‑100 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCg < 1:2526025/100‑1 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGTTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGt < 1:450752/100‑1 (MQ=255)
ttCCCTGGCTGGAACGCTTATATTATTCTTTATACAGTCTTTATAAAAATAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACAATATCGTGa < 2:3523966/100‑1 (MQ=255)
ttCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCg < 1:958602/98‑1 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGat > 2:1366346/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGatat > 1:10076/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGatat > 1:1234074/1‑100 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATAtttt < 1:618930/100‑1 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAAAAAAAACAGTATCGTGATAtttt > 2:2863006/1‑100 (MQ=255)
ttgAACGCTTAAATGATGTTTCATACAGTCTTTATAAAAAGAATGAAAAAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTa < 1:1861589/97‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTAc < 1:1151343/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATAAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTCATATTTTa > 2:833855/1‑99 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACg > 1:1767180/1‑100 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTTTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGc > 2:3087555/1‑97 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAggg > 1:2940147/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAggg < 1:1937752/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAggg > 2:768726/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAggg < 1:2452088/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAggg > 2:3184309/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGt < 1:3019158/100‑1 (MQ=255)
ttAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAgg > 1:3574550/1‑98 (MQ=255)
tAAATGCTGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTa > 2:794654/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATTATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTa > 1:2167421/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAggga > 1:1408230/1‑98 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTa < 1:607386/100‑1 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTa > 1:3451852/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAg > 2:679584/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAg > 1:2796983/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc > 1:1996415/1‑100 (MQ=255)
tgatgCTTCAGACAGTTTTTATAAAAAGAATTAAACAGGATTTATTGTCTGTTTATCATTA‑AAAAAAACATTATCGTGATATTTTACGCAAGGGTAg < 2:1858338/97‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGcccc > 1:3714191/1‑100 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:1702546/100‑1 (MQ=255)
gCTTCATACAGTTTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:2688691/99‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 1:1001385/1‑100 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 2:3659820/100‑1 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 2:147010/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAAGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATAGTGATATTTTACGCAAGAGTAACCCCAATGTTCa > 2:824717/1‑99 (MQ=255)
aCAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAtt < 1:768735/100‑1 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 1:287938/1‑100 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 2:2764036/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 2:625515/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 2:2772033/1‑100 (MQ=255)
tCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct > 2:2553878/1‑99 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 2:555640/1‑100 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAAGGTAGCCCCCATGTTCATTTCctc > 1:1365315/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct > 2:342850/1‑100 (MQ=255)
ttATAAAAAGAATTAAATAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 2:3650124/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:398980/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTATCTGTTCATCATTA‑AAAAAAACAGTATCGTGCTATTTTACGTAAGGGGAGCCGCCATGTTCATTTCCTCTg > 2:393371/1‑99 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGTTAGCCCCCATGTTCATTTCCTCTGGt < 2:1895970/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAAGGTAGCCCCCATGTTCATTTCCTCTg > 1:497739/1‑98 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:3392135/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 2:193141/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 2:158688/99‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa < 1:2990775/100‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCACCATGTTCATTTCCTCTGGTTa > 2:1631621/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACATTATCATGATATTTTACACAAGAGTAGCCCCCATATTCATTTCCTCTGGTTAg > 1:194282/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:151705/1‑100 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc > 1:2241397/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGCTATTTTACGCAAGGGTAACCCCAATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:399380/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:554787/1‑100 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa > 2:3130283/1‑100 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 1:942088/97‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc > 2:1701470/1‑100 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:1376543/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATT‑‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACt > 1:2708971/1‑100 (MQ=255)
aTTTATTGTCTGTTCATAATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:285807/100‑1 (MQ=255)
ttATGGTCGGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACt < 2:2808835/99‑1 (MQ=255)
aTTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCGAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 2:2172582/1‑100 (MQ=255)
aTTGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 2:3371833/1‑100 (MQ=255)
ttGTGTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCTTCTGGTTAGATGGCGACTATGAAACTATtc < 2:2109314/100‑1 (MQ=255)
tGTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct < 2:493633/100‑1 (MQ=255)
gTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:1810812/1‑100 (MQ=255)
gTCTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTATGATTAGATGGCGACTATGAAACTATtctc > 2:2381121/1‑100 (MQ=255)
cTGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTTCTCTGGTTAGATGGCGACTATGAAACTAtttttgc > 2:3898806/1‑95 (MQ=255)
tGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 1:1078676/1‑100 (MQ=255)
tGTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 2:3451813/100‑1 (MQ=255)
gTTCATCATTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc < 1:625522/100‑1 (MQ=255)
tcatcaTTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGa > 2:89859/1‑100 (MQ=255)
tcatcaTTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTAGCGCGa > 1:2326116/1‑100 (MQ=255)
catcatTA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:3640520/1‑100 (MQ=255)
|
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAA > NC_000913/4494777‑4494968
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
