Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F244 I0 R1
|
270 |
114.4 |
5840133 |
93.3% |
5448844 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 97.8%
| 306.4
/ ‑0.3
| 91 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base A (42/47); total (44/47) |
| Fisher's exact test for biased strand distribution p-value = 2.31e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.21e-01 |
Only 100 of 111 total aligned reads displayed.
CTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494780‑4494970
|
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaa > 2:2440973/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaa > 1:1521593/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaa > 2:659070/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGGTGGAACGCCTAAATTATGCTTCATACAGTCGTTATAAGAAGAATGAAACAGTATTTCTAGTCAGTTCATGATT‑‑caaa > 1:2508890/1‑99 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa < 1:2531685/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa < 2:347027/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa < 1:309179/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa > 1:79320/1‑100 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑a > 2:806355/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aa > 2:2113047/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aa > 2:1223690/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑a > 2:1204026/1‑99 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGCTCATCATT‑‑aaaaa‑aa > 1:885319/1‑100 (MQ=255)
agaAGATCGACTTCCCTGGCTGGAACGCTTTAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aa > 1:1381982/2‑100 (MQ=255)
gaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aaa > 1:1816291/1‑99 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aaac < 1:2283012/100‑3 (MQ=255)
aaGATCGACTTCACTGGCTAGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aaac < 1:177984/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aaaca < 2:2682279/100‑4 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa‑aaacag > 1:512750/1‑96 (MQ=255)
aTCAACTTCCCTGGCTGTAACGCTTTGATAATCCTTTATAAAGACGTTAGAAAAAAAAAGAAACAGGATGTATAGCAGGTTCATCATT‑‑aaaaa‑aagcag < 1:729021/99‑5 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTa < 2:1841985/100‑1 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGt < 2:636546/100‑1 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATAATTA‑AAAAA‑AACAGTATCGt < 1:571318/100‑1 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGata > 1:2007520/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGa > 1:1057494/1‑98 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAGAACAGTATCGTGata > 2:2872239/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGatat > 2:1268814/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGatat > 2:1141410/1‑100 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATAtt > 2:1594277/1‑100 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATAttt > 1:2716988/1‑100 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATAttt > 1:892116/1‑100 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTa > 2:1994396/1‑100 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTa < 2:575529/100‑1 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTATTCATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCATGATATTTTa > 1:1914004/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACg < 2:2046518/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACg < 2:1052549/100‑1 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGc < 2:1712396/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAggg > 1:1631646/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATCAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAgg < 2:160520/99‑1 (MQ=255)
cTTAAATCATGCTTCATACAGTCTTTATAAAAAGAATAAAACAGGATTTATTGTCTGTTCATAATTA‑AAAAA‑AACAGTATCGTGCTATTTTACGCAAg > 1:900344/1‑98 (MQ=255)
cTTAAAGGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAg < 2:2014361/98‑1 (MQ=255)
ttAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGt < 2:2259404/100‑1 (MQ=255)
taaaaTGATACTTAATACACTCTTAATAAAAATAATGAAAAAGGATTTATTTTCTGTTCATAATAA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAggg < 1:1138540/97‑1 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAg > 2:1790405/1‑100 (MQ=255)
aaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGc > 2:1080054/1‑100 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGcc < 2:1414309/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:1750324/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:2300462/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGcccc < 1:20383/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGcc > 1:2693175/1‑98 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGAGTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGccccc > 1:1561120/1‑99 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 2:657158/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 2:2280609/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 2:512753/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 2:2240839/100‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 2:2150654/100‑1 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa < 1:1524837/100‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 2:1396077/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:12636/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:2511688/1‑100 (MQ=255)
aatCTTTATAAAAACAATGAAACAGGATTTATTGTCTGTTAAAAAAAA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc < 1:1986200/98‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 1:2617729/100‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 2:69458/100‑1 (MQ=255)
tgtttATAAAAAGAATGAAACAGGATCTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct < 1:275725/98‑1 (MQ=255)
tCTTTATAACAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATCTTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 1:1917414/99‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 1:607456/98‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 2:1632835/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 2:2041974/99‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 1:2037484/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:850961/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:905897/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGTGTAGCCCCCATGTTCATTTCCTCTGGt > 1:1298126/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTCCTCTGGtt > 1:2602028/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATAGTGATATTTTACGCAAGGGTTGCCCCCATGTTCATTTCCTCTGGt > 1:1176622/1‑99 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:2361097/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:764991/1‑100 (MQ=255)
aaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 1:1193007/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 2:441466/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg > 1:25828/1‑100 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTTTGGTTAGAt > 1:2502035/1‑98 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc > 2:1539850/1‑100 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCAACAGTAAAAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 2:405773/100‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCAATGTTAATTTCCTCTGGGTAGATGGCg > 1:1131620/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:2789748/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:1547351/1‑100 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt < 2:1882851/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCCACTATGa < 2:1529595/100‑1 (MQ=255)
gATTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCAACAATATTCATTTACTCTGGTTCGATGGCGACTATGaaa > 1:1630958/1‑100 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:2506925/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:174688/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:2717006/100‑1 (MQ=255)
aTTTATTATCTGTTCAACATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:606734/100‑1 (MQ=255)
ttATTGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTa < 1:1574747/100‑1 (MQ=255)
tGTCTGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct < 2:1684211/100‑1 (MQ=255)
tGTCTGTTCATCATTA‑AAAAA‑AACAGTATCATGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 2:807802/1‑100 (MQ=255)
tGTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTAATTTTCTCTGGTTACATGGCGACTATGAAACTATTCTctcg > 1:1915059/1‑100 (MQ=255)
gTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 2:2451186/1‑100 (MQ=255)
gTTCATCATTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 2:2410030/1‑100 (MQ=255)
catcatTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:830916/1‑100 (MQ=255)
tcatTA‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg < 1:724287/100‑1 (MQ=255)
|
CTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAA‑AACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494780‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
