Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F53 I0 R1
|
47 |
135.3 |
6511354 |
96.7% |
6296479 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 99.1%
| 399.9
/ ‑3.3
| 111 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (61/49); total (61/50) |
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 |
Only 100 of 135 total aligned reads displayed.
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAA > NC_000913/4494777‑4494968
|
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCAtt < 2:275349/100‑1 (MQ=255)
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCAtt < 1:1190236/100‑1 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑a > 1:775530/1‑100 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑a < 1:2058402/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaa > 1:348778/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATTATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaa < 2:843254/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaa > 1:152331/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaa > 1:2118253/1‑100 (MQ=255)
ntgATCGACTTCCGTGGCTGGAACGCTTAAAAGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaaac > 1:2191298/3‑98 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATCCAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCTTT‑taataatgcc > 1:2712298/1‑95 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaaacag > 2:180400/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaaacag > 1:1152034/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaaacag > 1:1273043/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaaaca > 1:942269/1‑96 (MQ=255)
tCGTCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGAATTTATTGTTTGTTC‑AACATT‑aaaaaaaac < 2:204992/96‑3 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTTATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaaacag < 2:2226058/98‑5 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑aaaaaaaaacagt < 1:3046806/100‑7 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATc > 2:2689028/1‑100 (MQ=255)
ttCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTg < 1:770177/100‑1 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATCAAAAGAATGAAACAGGATTTATTGTCTGTAC‑ATCATTAAAAAAAACAGAATCGTGat > 1:1635951/1‑100 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGa > 1:897364/1‑99 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGata > 1:755211/1‑100 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATAtt < 2:589511/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATAtttt < 2:1143857/98‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACg > 2:340555/1‑100 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATAAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACg < 2:823446/98‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAg < 1:1449876/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAg > 2:63849/1‑100 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAgn < 2:532617/100‑2 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTAA‑AAAAAAAAAAAAAACAGTATCGTGATATTTTACGCAAgg < 2:8219/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCaa > 2:2748884/1‑97 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTa > 2:300722/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTa > 1:1331231/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc > 2:96554/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:2920662/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGcc > 2:3012709/1‑99 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGcccc < 2:1031677/100‑1 (MQ=255)
atgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGccccc < 1:1204776/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:4461/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:888667/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:885578/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:1565417/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:2850343/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 2:1370080/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 2:18008/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 2:2661736/100‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:1049465/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt > 2:2482101/1‑100 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc > 2:2491771/1‑100 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 2:2924165/100‑1 (MQ=255)
tctcAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa < 2:1514177/97‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:2363907/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCaaga > 1:1514186/1‑97 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 1:3188048/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 2:2900956/1‑99 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 1:994654/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 1:2930486/1‑99 (MQ=255)
ttATAAACAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATCTTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 2:1745712/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:2911518/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg > 1:82924/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 2:775528/99‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTCATATTTTACGCAAGGGTAGCCCCCATGTCCATTTCCTCTgct < 1:2197937/100‑3 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 2:755210/100‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:2045633/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTATCCCCCATGTTCATTTCCTCTGGTTa > 2:351350/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 1:248050/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:2888134/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa < 1:216389/100‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTC‑ATAATTAAAAAAAAAAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATATTCATTTCCTCTGGTTa > 2:3239905/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa > 1:1521689/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGAGATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:2270345/1‑98 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 1:1012574/100‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg > 2:1527/1‑100 (MQ=255)
attaaaCAGGATTTATTGTCTGTTA‑ATCATTAAAAAAAACAGTATCGAGAAATTTTACGCAAGGGTAGACCACATGTTCATTTTCTCTGGGTAGATg > 2:2643197/4‑97 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg > 2:42997/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa < 2:1136364/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc > 1:638113/1‑100 (MQ=255)
gAAACAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc > 1:664189/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:1900538/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:3161565/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGAGTAGCCACCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:2276118/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:2482117/100‑1 (MQ=255)
aGGATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa > 2:1147957/1‑100 (MQ=255)
ggATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa > 2:2118183/1‑100 (MQ=255)
ggATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa > 1:1584908/1‑100 (MQ=255)
ggATTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 1:2929811/99‑1 (MQ=255)
gATTTATTGTCTGTTG‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaaa < 1:3206873/100‑1 (MQ=255)
aTTTATTGTCTGTTCAAAAATA‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:608210/100‑1 (MQ=255)
aTTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:1033741/100‑1 (MQ=255)
aTTTATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:1273035/100‑1 (MQ=255)
tATTGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt > 2:2423315/1‑100 (MQ=255)
ttGTCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtc < 1:1654709/100‑1 (MQ=255)
tCTGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg < 1:563412/100‑1 (MQ=255)
tGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:2673998/1‑100 (MQ=255)
tGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc < 1:992142/99‑1 (MQ=255)
tGTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCAACCATGATCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:792324/1‑100 (MQ=255)
gTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc < 1:292160/100‑1 (MQ=255)
gTTC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:2901286/1‑100 (MQ=255)
ttC‑ATCATTAAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 1:1840535/100‑1 (MQ=255)
c‑atcatTAAAAAAAACAGTATCGTGATATTCTAGGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATGCTCGCGCGaa > 2:2127691/1‑100 (MQ=255)
|
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTC‑ATCATT‑AAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAA > NC_000913/4494777‑4494968
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
