Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F181 I1 R1
|
66 |
119.2 |
5981814 |
94.9% |
5676741 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883 |
(A)7→8 |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 96.8%
| 447.2
/ 5.4
| 125 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (4/0); new base A (66/55); total (70/55) |
| Fisher's exact test for biased strand distribution p-value = 1.30e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 140 total aligned reads displayed.
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAT > NC_000913/4494778‑4494969
|
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑a > 1:978900/1‑100 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAAAGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑a < 2:1140641/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑aaa < 2:2462683/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑aaaa > 1:436788/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTAATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑aaaa > 1:1477174/1‑100 (MQ=255)
aagcacGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAATAGGATTTATTGTCTGTTCATG‑ATT‑‑aaaaaaaac < 2:448985/95‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑aaaaaaaac < 1:284982/100‑3 (MQ=255)
aaGATCAAATTACATGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTAAAA‑ATT‑‑aaaaaaaac < 2:885396/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑aaaaaaaaca > 2:1269495/1‑97 (MQ=255)
tCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTa < 1:2186574/100‑1 (MQ=255)
cGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTa > 1:841209/1‑99 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTACAAA‑AAAA‑AAAAAAA‑CAGTATCGt < 2:706325/100‑1 (MQ=255)
tCCCTGGCTGGAAAGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGa < 2:2686418/100‑1 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGata > 2:2614485/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGatat > 1:404568/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGatat > 1:2102178/1‑100 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATAtt > 2:2962484/1‑100 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑AAAAAAACCAGTATCGTGATAtt > 2:768566/1‑100 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTa > 2:2709347/1‑100 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTa < 2:2128731/99‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTAc > 2:1463347/1‑100 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTAc < 1:2417690/100‑1 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGc < 1:989748/100‑1 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTAAATA‑ATAA‑AAAAAAA‑CAGTATCGTGATATTTTACGc < 2:1833716/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAg > 2:420212/1‑100 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAgg < 2:2233826/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAggg > 2:548756/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTa < 1:2760226/100‑1 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTa < 1:1944140/100‑1 (MQ=255)
tAAATGATGCTTCATACAGTCCTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAATA‑‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTa > 2:139144/1‑100 (MQ=255)
aaaTGATGATTCATACAGTCTTTAAAAAAAGAAAGAAAAAGGATTTATTGTCTGTAAAAA‑AAAA‑AAAAAAA‑CATTATCGTGATATTTTACGCAAgg < 2:1738753/96‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGACACAGGATTTATTGTCTGTTCATC‑ATTAAAAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGcc > 1:2326479/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccc > 2:24032/1‑100 (MQ=255)
atgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccccc > 1:568399/1‑100 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGACCCCa > 2:719262/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:447266/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:1138370/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:2554391/100‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:2552217/100‑1 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGt > 2:61139/1‑100 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 2:2087174/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 1:2173170/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAAAGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 2:660510/100‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc > 2:710782/1‑100 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGAAGCCCCCACGTTc > 1:1686849/1‑100 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt > 2:2941040/1‑98 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 1:1888845/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt < 2:2685831/100‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:1169839/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 2:2467869/1‑100 (MQ=255)
aCAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAtt < 1:760115/100‑1 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTTTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt < 1:1781356/99‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 2:1209558/1‑100 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 2:436786/100‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 1:2373643/100‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGAGATATTTTACGCAAGGGTAGCCCCCATGttaactt > 1:313429/1‑91 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CCGTATCGTGATATTTTACGCAAGGGTAGCCCCCCTGTTCATTTCctc > 1:487962/1‑99 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct > 1:687325/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctcn < 2:2878221/100‑2 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:2445591/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg > 2:110236/1‑100 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTATCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 1:1824369/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:2665111/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 2:1622786/100‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:188356/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa < 2:2381008/100‑1 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg < 2:2054644/100‑1 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 1:2614500/100‑1 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa > 2:1041358/1‑100 (MQ=255)
aaGAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 1:719265/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAtag > 2:2887866/1‑98 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 1:1342044/100‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTAATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATgg < 2:1715295/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc < 1:957402/100‑1 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 2:1004429/1‑100 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 2:146196/1‑99 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CCGTATCGTGATATTTTAAGCCAGGGTAGCACACATGTTCATTTCCTCTGGTTAACTGGCGAc > 2:2799171/1‑99 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:1453892/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:2779832/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:1699784/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:1823402/100‑1 (MQ=255)
gATTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaaa < 2:2547090/100‑1 (MQ=255)
aTTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc > 1:2457535/1‑100 (MQ=255)
aTTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:1686838/100‑1 (MQ=255)
aTTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:2219592/100‑1 (MQ=255)
aTTTATTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc > 2:2262441/1‑100 (MQ=255)
aTTTATTATCTTTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:529414/100‑1 (MQ=255)
aTTGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt < 1:2624627/100‑1 (MQ=255)
tGTCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct > 2:772609/1‑100 (MQ=255)
tCTGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg < 2:404566/100‑1 (MQ=255)
tGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:2961973/1‑100 (MQ=255)
tGTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTACATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:2096079/1‑100 (MQ=255)
gTTCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 2:2656893/1‑100 (MQ=255)
ttCATC‑ATTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 2:277230/100‑1 (MQ=255)
catc‑atTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 2:946425/1‑100 (MQ=255)
catc‑atTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 2:2925453/1‑100 (MQ=255)
catc‑atTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 2:2159596/1‑100 (MQ=255)
atc‑atTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt > 2:2961436/1‑100 (MQ=255)
atc‑atTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt < 1:1302377/100‑1 (MQ=255)
tc‑atTA‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt < 2:606754/99‑1 (MQ=255)
|
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATC‑ATT‑‑AAAAAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAT > NC_000913/4494778‑4494969
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
