Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I1 R1
|
77 |
120.7 |
6116409 |
93.2% |
5700493 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883 |
(A)7→8 |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 94.4%
| 358.9
/ 12.9
| 107 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base A (60/41); total (63/44) |
| Fisher's exact test for biased strand distribution p-value = 6.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 124 total aligned reads displayed.
CTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494780‑4494970
|
ntgatgaAGATCGACTTCCCTGGCTGGAATGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa > 2:340804/2‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa > 2:625677/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa < 1:1910487/100‑1 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑a > 1:809676/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑a > 2:1390150/1‑100 (MQ=255)
tgatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑a > 1:2038900/1‑100 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaa < 2:1941285/100‑1 (MQ=255)
gaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaaaa > 1:269708/1‑99 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaaaac < 2:549781/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaaaaca > 1:449891/1‑97 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaaaa > 2:2664811/1‑97 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaaaacag < 1:1792187/100‑5 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaaaacag < 1:1327545/100‑5 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑aaa‑aaaaacagt > 2:3015231/1‑95 (MQ=255)
cGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTAt > 2:1511019/1‑100 (MQ=255)
cGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTAt > 2:2019416/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATc < 1:2074085/100‑1 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTATGTTCA‑TCATTA‑‑AAA‑AAAACAGTATc > 1:1249322/1‑100 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCg < 2:2294087/100‑1 (MQ=255)
aCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCg < 2:587040/100‑1 (MQ=255)
cTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCg > 1:1508619/1‑99 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGa > 2:2746073/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGatat > 1:728160/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGatat > 1:2703772/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGatat > 1:432450/1‑100 (MQ=255)
gcctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATAttt > 1:2065909/3‑100 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATAtttt < 1:1770336/100‑1 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATAtttt > 2:466394/1‑100 (MQ=255)
ctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTa > 2:1858527/1‑100 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTATTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTAc < 1:1745559/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACg < 2:1025499/100‑1 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑AAA‑AAAACAGTATCGTGATATTTTACGc < 2:1730265/99‑1 (MQ=255)
aagcatAAATGATGCTTCATACAGTCTTTAAAAAAAGAATGAAACAGGATTTATTGTCTGTAAA‑AAAAAA‑‑AAA‑AAAACAGTATCGTGATATTTTACGc < 2:2079283/93‑1 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAgg > 2:1458985/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAggg > 2:51890/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAggg < 2:2191550/100‑1 (MQ=255)
ttAAATGATGCTTCATACCGTCTTTATAAAAAGAATGAAACAGGCTTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGt < 2:2437800/100‑1 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑AAAGAAAACAGTATCGTGATATTTTACGCAAGGGTa > 2:2800283/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAg > 2:937158/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATCTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAg > 1:2320592/1‑100 (MQ=255)
aaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGc > 1:2234500/1‑100 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCG‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGcc < 2:1806525/100‑1 (MQ=255)
ntgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGcc > 2:2930339/2‑97 (MQ=255)
atgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:2398207/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:2283235/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGGCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt < 1:2803595/100‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg > 1:2929610/1‑100 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGt > 1:1476133/1‑100 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa < 2:432443/100‑1 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa > 1:272980/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:2470117/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt < 2:101646/100‑1 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCAttt > 2:3017295/1‑100 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 2:2580982/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc < 2:342270/100‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 2:80243/1‑99 (MQ=255)
tatgtataAAAAAAATTAAACAGGATTTATTCACTGTTAATTAATA‑‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGTCCCCATGtt < 2:2726348/88‑1 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 2:428807/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTAAAAAA‑AAAACAGTATCGAGAAATTTAACACAAGGGCGGCCCCCATGCTCATTTc > 1:1433934/1‑98 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc > 1:2489386/1‑99 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg > 2:2394560/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg > 1:2920228/1‑100 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 1:937933/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 2:2634676/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 1:2168552/100‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 1:1455837/100‑1 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 1:103529/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:1645699/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:1319665/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 2:1534668/100‑1 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 2:652345/100‑1 (MQ=255)
aaGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 2:2470084/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg > 1:1704359/1‑100 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg > 2:2646880/1‑100 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 1:2293460/1‑100 (MQ=255)
tGAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa < 1:2533639/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATTGTGATATTTTACACAATGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGa > 2:1036130/1‑99 (MQ=255)
aaaCAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:1102649/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:2664848/100‑1 (MQ=255)
aaCAGGATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTa < 1:2746110/100‑1 (MQ=255)
ggATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa > 2:2349718/1‑100 (MQ=255)
gATTTATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATAGCGACTATGaaa > 1:2948470/1‑100 (MQ=255)
ctcttccgatCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaaa < 2:2764289/91‑1 (MQ=255)
ttATTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTa < 2:210029/100‑1 (MQ=255)
aTTGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATGTTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 2:1630535/1‑100 (MQ=255)
tGTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct < 1:466401/100‑1 (MQ=255)
gTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCGCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:2134635/1‑100 (MQ=255)
gTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:1982004/1‑100 (MQ=255)
gTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:662587/1‑100 (MQ=255)
gTCTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:2718839/1‑100 (MQ=255)
cTGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc < 1:41665/100‑1 (MQ=255)
tGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:1269797/1‑100 (MQ=255)
tGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 2:449884/100‑1 (MQ=255)
tGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:2302681/1‑100 (MQ=255)
tGTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCACCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 2:2069441/1‑100 (MQ=255)
gTTCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:2777682/1‑100 (MQ=255)
ccgatctcatTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 1:2874769/94‑1 (MQ=255)
ttCA‑TCATTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 2:1092420/100‑1 (MQ=255)
tcatTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg > 1:945592/1‑100 (MQ=255)
tcatTA‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg < 2:2285466/100‑1 (MQ=255)
|
CTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCA‑TCATT‑‑‑AAA‑AAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494780‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
