Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F110 I1 R1
|
51 |
90.5 |
4460762 |
96.5% |
4304635 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883 |
(A)7→8 |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 96.1%
| 360.3
/ 6.0
| 104 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/1); new base A (53/45); total (57/47) |
| Fisher's exact test for biased strand distribution p-value = 6.25e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 120 total aligned reads displayed.
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAtt > 1:585855/1‑100 (MQ=255)
tATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAtt < 1:61636/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa > 1:235635/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa > 1:1134037/1‑100 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa > 2:871236/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aa > 1:1981965/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aa > 2:1833951/1‑100 (MQ=255)
aaGATCGGCTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaac < 2:1949315/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaac < 2:299825/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaac < 2:698594/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATCAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaac < 1:1189694/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTGAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACATGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaac < 1:1081587/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaaca > 1:816022/1‑97 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaaca > 1:1042262/1‑97 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a‑aa‑aaaaaca > 2:2056459/1‑97 (MQ=255)
cGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTa > 2:708530/1‑99 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGCTTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATc > 2:1583776/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATc > 2:2147378/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATc > 1:184840/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATc > 1:1779892/1‑100 (MQ=255)
ttCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTg > 1:1066317/1‑100 (MQ=255)
ttCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTg > 2:902601/1‑100 (MQ=255)
ttCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTg < 2:1167515/100‑1 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGat > 2:1982788/1‑100 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTg > 2:1453796/1‑97 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGatat < 2:146142/100‑1 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGatan < 2:2059259/100‑2 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATAtt < 2:1376121/100‑1 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATAttt < 1:266672/99‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTAc < 2:1023506/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACg > 1:233005/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACg < 1:870770/100‑1 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTAATAATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACg < 1:949929/98‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAg < 1:367379/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAggg > 2:2122762/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAggg > 1:1446704/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAggg > 1:467911/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTa > 2:1041261/1‑100 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTa > 1:1047198/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAg < 2:585856/100‑1 (MQ=255)
aaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGc < 1:1266706/100‑1 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATAATAA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGcc < 1:1584531/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccc > 2:1544533/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATGTATTGTCTGTTCATCATT‑‑AGAA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccc > 1:1213478/1‑100 (MQ=255)
gatgCTTCATCAAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AA‑AAAAGCAGTATCGTGATATTTTACGCAAGGGTAGcccc < 1:1462106/100‑1 (MQ=255)
atgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGccccc > 2:1815272/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:743833/1‑100 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAACCAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 2:124581/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 2:636794/100‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCACGGGTAGCCCCCAt > 1:184989/1‑96 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa < 2:1461042/100‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:1161624/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:1448652/1‑100 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 1:2082930/1‑100 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc < 2:1112316/100‑1 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc > 1:1636310/1‑99 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGCGATATGTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 1:1503149/1‑100 (MQ=255)
tttATAAAAATAATGAAACAGGATTGATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 1:1245662/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTG‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 1:1424658/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct > 2:514718/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 2:1917382/100‑1 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 1:833190/100‑1 (MQ=255)
tttATAAAAAGAAGGAAACAGTATTTATGGTTTTTTCATCATTA‑A‑AA‑AAAA‑CATTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctc < 1:648802/99‑1 (MQ=255)
tataAAAAGAATGAAACCGGCTTTATTGTCCGCTCATCATT‑‑A‑AACAAAA‑CAGTATCGTGATACTTTACGCACGACTAGCCCCCATGTTCATTTCctctcg > 1:434364/1‑98 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctcttg < 2:1496971/100‑3 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 2:279504/100‑1 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAA‑AA‑AAAA‑CAGTGTCGTGATATTTTACGCTCGGGTAGCCCCCATGCTCATTTCGTCTGGt > 1:571661/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGAAAGGGTACCCCCCATGTTCATGTCCTCTGCtt > 1:2011098/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTC‑A‑AA‑AAAA‑CAGTATCGCGATATTTTACGCCTGGGTATCACCCATGTTCGATTTCTCTGGTTa > 1:587502/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTa > 2:1754886/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg < 2:1539152/100‑1 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:2197975/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 2:562131/100‑1 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 1:997203/100‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 1:2123891/100‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg > 1:677942/1‑100 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:2089632/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAATGGTAGCCACCATGATCATATCATCTGGTTAGATGGCGACt > 1:1351065/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:518430/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:616262/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 2:866863/1‑100 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt < 2:184840/100‑1 (MQ=255)
ggATTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa < 1:1508484/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:937945/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:938166/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:1339863/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:411326/100‑1 (MQ=255)
gTCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 1:1614540/1‑100 (MQ=255)
tCTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcg > 2:2017801/1‑100 (MQ=255)
cTGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc < 1:2093580/100‑1 (MQ=255)
tGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg < 1:45178/100‑1 (MQ=255)
tGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 1:249902/1‑100 (MQ=255)
tGTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 1:248957/1‑100 (MQ=255)
gTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 2:1721492/1‑100 (MQ=255)
gTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:918689/1‑100 (MQ=255)
gTTCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc > 1:1640562/1‑100 (MQ=255)
ttCATCATTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgcg < 2:670793/100‑1 (MQ=255)
tcatcaTTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGa < 2:1102756/100‑1 (MQ=255)
atcatTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt > 1:1098030/1‑100 (MQ=255)
tcatTA‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg < 2:543336/100‑1 (MQ=255)
|
TATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑A‑AA‑AAAA‑CAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494777‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
