Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F110 I0 R1
|
60 |
98.0 |
4713732 |
96.7% |
4558178 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 96.8%
| 330.3
/ 3.2
| 93 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base A (49/41); total (50/43) |
| Fisher's exact test for biased strand distribution p-value = 5.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.86e-01 |
Only 100 of 112 total aligned reads displayed.
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494778‑4494970
|
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a < 1:1156810/100‑1 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a > 2:789098/1‑100 (MQ=255)
aTCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑a < 1:1898912/100‑1 (MQ=255)
cTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaa > 1:1967541/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa < 1:621118/100‑1 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa > 1:1270466/1‑100 (MQ=255)
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaa > 1:2042600/1‑100 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaa < 1:705989/100‑1 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaa > 1:1421347/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaa < 1:1860438/100‑1 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaac < 1:541925/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaac < 1:1340505/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATAAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaa > 2:1064884/1‑98 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaaca > 1:993417/1‑97 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATAATT‑‑aaaaaaaac < 2:836899/99‑3 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaacag > 1:1536527/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑aaaaaaaacag < 1:455070/100‑5 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGt > 2:905236/1‑98 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGa < 1:853410/100‑1 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGa > 2:288561/1‑100 (MQ=255)
tCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGa < 1:417676/100‑1 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAATAATGAAACAGGATTTATTGTCTGTTAATCATTA‑AAAAAAACA‑‑GTATCGTGATAttt < 2:238401/100‑1 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATAttt > 2:1085183/1‑100 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATAtttt > 1:968118/1‑100 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTAc < 1:1185510/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTAc < 1:121889/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTAc > 1:2099774/1‑100 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACg > 2:440294/1‑100 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTAc > 2:1444175/1‑98 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCa < 1:1980192/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAg < 1:846580/100‑1 (MQ=255)
gCTTAAATGATGCTTCATACAGGCTTTATAAAAAGAATGAAACATGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAg < 2:1160363/99‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTATGCAAgg > 2:946054/1‑99 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAggg > 2:355561/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAggg < 2:282934/100‑1 (MQ=255)
aaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGc > 1:1398274/1‑100 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGccc > 2:2270854/1‑100 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGcccc < 1:2058888/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGcccc < 1:1200291/100‑1 (MQ=255)
gatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGcccc > 2:130348/1‑100 (MQ=255)
atgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGccccc > 1:1865566/1‑100 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 2:993412/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCa > 1:553398/1‑99 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 2:1197726/1‑100 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGGAGccccc > 1:658678/1‑98 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 2:374958/100‑1 (MQ=255)
cTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:51366/100‑1 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAAAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATg < 1:228/100‑1 (MQ=255)
tCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 2:881738/100‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt < 1:2220847/99‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt > 1:2054138/1‑100 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt < 2:1640722/100‑1 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:1597796/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:1596998/1‑100 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTc < 2:1775556/100‑1 (MQ=255)
aGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAAAAAGGAATCTTATTTTTTTACCCAAGGTAAGCCCCCATGTTCAttt > 2:1627425/1‑100 (MQ=255)
tttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCctct < 2:2087907/100‑1 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg > 1:1602172/1‑100 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg > 1:810543/1‑100 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 1:1761887/100‑1 (MQ=255)
tataAAAAGAATGAAACAAGATTTATTGTCTGTTCAGCATTA‑AAAAAAACA‑‑GTATCGTAATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct < 2:1908747/96‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAATGGTCGCCCCCATGTTCATTTCCTCTg > 2:1106518/1‑98 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 2:273969/1‑100 (MQ=255)
aaaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt < 2:161606/99‑1 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGTGTAGCCCCCATGTTCATCTCCTCTGGTTAg > 2:1707284/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:829170/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:2264144/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCCGGTTAg > 1:2519/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa > 2:402536/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTACTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCTTCTGGTTata > 2:353312/1‑98 (MQ=255)
aaGAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGAt < 2:1769106/100‑1 (MQ=255)
gAATGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCACAATGTTCATTTACTCTGGTTAGATgg > 2:1168284/1‑100 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc < 1:2185436/100‑1 (MQ=255)
aaTGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGc < 1:1576005/100‑1 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 1:2251105/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt < 1:384825/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt < 2:968113/100‑1 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:187885/1‑100 (MQ=255)
aaCAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCCTTTCCTCTGGTTAGATGGCg > 2:1757351/1‑96 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt < 2:1084281/100‑1 (MQ=255)
aCAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTAt < 1:1986628/100‑1 (MQ=255)
cAGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg < 2:2054122/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 2:157618/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 2:702607/100‑1 (MQ=255)
gATTTATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa > 2:1488763/1‑99 (MQ=255)
aTTTATTATCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCTAGGGTAGCCCCCATATTCATTTCCTCTGGTTAGATGGCGCCTATgta > 2:639843/1‑96 (MQ=255)
ttATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTa > 2:1760169/1‑100 (MQ=255)
tATTGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt < 1:1760182/100‑1 (MQ=255)
tGTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtc > 2:59855/1‑99 (MQ=255)
gTCTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtctc > 2:67575/1‑100 (MQ=255)
cTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc > 1:21326/1‑100 (MQ=255)
cTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc > 2:937948/1‑100 (MQ=255)
cTGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgc > 1:818098/1‑100 (MQ=255)
tGTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcg > 1:782842/1‑100 (MQ=255)
gTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTCTGAAACTATTCTcgcgc > 2:674039/1‑100 (MQ=255)
gTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTcgcgc < 1:2152164/100‑1 (MQ=255)
gTTCATCATTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGACACCATGTTTATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCgcgcgc > 2:2261913/1‑100 (MQ=255)
catcatTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:2276173/1‑100 (MQ=255)
atcatTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt < 1:789101/100‑1 (MQ=255)
tcatTA‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg < 2:1185294/100‑1 (MQ=255)
|
ATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATT‑‑AAAAAAACA‑‑GTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494778‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
