Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F181 I0 R1
|
65 |
126.1 |
6126155 |
96.5% |
5911739 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,494,883:1 |
(A)7→8 |
100% |
coding (261/564 nt) |
idnK → |
D‑gluconate kinase, thermosensitive |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,494,876 | 1 | . | A | 95.5%
| 463.3
/ 13.0
| 132 | coding (254/564 nt) | idnK | D‑gluconate kinase, thermosensitive |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base A (66/60); total (69/63) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 154 total aligned reads displayed.
GATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑AAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494782‑4494970
|
gatgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑a > 1:3046675/1‑100 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATTATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aa < 2:2502113/100‑1 (MQ=255)
atgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aa > 1:2086747/1‑100 (MQ=255)
tgaAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAAGAGGATTTACTGTCTGTTCATCAT‑T‑aaa‑a‑aaa > 1:2059784/1‑100 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aaaac < 2:2649775/100‑3 (MQ=255)
aaGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aaaac < 2:1977564/100‑3 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aaaaca > 2:554127/1‑97 (MQ=255)
aGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aaaac > 2:796811/1‑97 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aaaacag > 2:1149424/1‑96 (MQ=255)
gATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aaaacag > 2:506124/1‑96 (MQ=255)
aTCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑aaa‑a‑aaaacagt > 2:2631956/1‑95 (MQ=255)
cGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTAt < 2:2426204/100‑1 (MQ=255)
cGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTAt > 2:394035/1‑100 (MQ=255)
gACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATc > 1:1466468/1‑100 (MQ=255)
tttccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑AAA‑A‑AAACAGTATCGTg < 1:1183081/96‑1 (MQ=255)
cccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGat < 2:2205838/100‑1 (MQ=255)
ccTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGata > 1:900426/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGatat > 1:356414/1‑100 (MQ=255)
ctggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGatat < 1:1462462/100‑1 (MQ=255)
tggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATAtt < 1:440250/100‑1 (MQ=255)
ggctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATAttt < 2:101757/100‑1 (MQ=255)
gctggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATAtttt < 1:7232/100‑1 (MQ=255)
tggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTAc < 1:2455077/100‑1 (MQ=255)
ggAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACg < 2:1493020/100‑1 (MQ=255)
gAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGc < 2:3012218/100‑1 (MQ=255)
aaCGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑AAA‑A‑AAACAGTATCGTGATATTTTACGCaa < 2:1505114/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAg < 2:233224/100‑1 (MQ=255)
cGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAg < 2:2271742/100‑1 (MQ=255)
ncTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTCCGCa > 1:2707186/2‑97 (MQ=255)
gCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAgg < 2:2652549/100‑1 (MQ=255)
cTTAAATGATGCTTCATCCAGTCTTTATAAAAAGAATGAAACCGGCTATATTGTCTGTTAATCATAA‑AAA‑A‑AAAAAGTATCATGATATGTTAc > 1:1922591/1‑93 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTTTTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAggg > 1:2329969/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAggg > 1:2625260/1‑100 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAg > 1:1194735/1‑98 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAg < 1:2936798/98‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTAATAAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAggg < 1:916384/100‑1 (MQ=255)
cTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGCTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTAc > 1:876610/1‑93 (MQ=255)
tAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTAATAAT‑TAAAA‑A‑AAACAGTATCATGATATTTTACGCAAGGGTa > 1:542897/1‑100 (MQ=255)
aaaTGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAg > 2:1797563/1‑100 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGcc < 2:2612311/100‑1 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGcc < 1:1280673/100‑1 (MQ=255)
atgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGcc < 2:567152/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGccc < 2:2470418/100‑1 (MQ=255)
tgatgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGAAAAAAAT‑AAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGccc < 1:1073213/100‑1 (MQ=255)
tgCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa < 1:1398336/100‑1 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCa > 2:1342479/1‑99 (MQ=255)
gCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCAt > 1:983516/1‑100 (MQ=255)
ttCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGt > 1:783554/1‑100 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc < 2:900431/100‑1 (MQ=255)
cATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTc > 1:897624/1‑100 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGtt > 1:3038735/1‑98 (MQ=255)
aTACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCa < 1:3004862/100‑1 (MQ=255)
tACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAt < 1:2999957/100‑1 (MQ=255)
aCAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAtt < 2:2053211/100‑1 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCAttt > 2:116286/1‑100 (MQ=255)
cAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCACCAATGTTCAttt > 1:780023/1‑100 (MQ=255)
gTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 2:1290431/1‑100 (MQ=255)
gTCTTTATAAAAAAAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTcc > 2:2052962/1‑100 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTCTACGCAAGGATACCCCCCATGTTcctgttc > 1:1228349/1‑92 (MQ=255)
cTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑AAA‑ACAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCct > 2:1332187/1‑99 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg > 2:2870953/1‑100 (MQ=255)
ttATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTg < 1:696862/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:1552874/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTgg < 2:1764816/100‑1 (MQ=255)
tataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGAGTAGCCCCCATGTTCATTTCCTCTgg > 1:790143/1‑100 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt < 2:2632395/100‑1 (MQ=255)
ataAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGt > 2:2450675/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCTTGATATTTTACTCAAGGGTAACACCCATGTTCATTTCCTCTGGtt > 1:2240588/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:2867084/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:1721004/1‑100 (MQ=255)
taAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGtt > 1:866448/1‑100 (MQ=255)
aaaaGAATGAAACAGGTTTTTTTGTCTGTTCTTCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 1:1877186/1‑100 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg < 1:2117493/100‑1 (MQ=255)
aaaaGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAg > 2:2399966/1‑100 (MQ=255)
aaaGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGa < 2:2590734/100‑1 (MQ=255)
aGAATGAAACAGTATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg < 1:2429734/100‑1 (MQ=255)
aGAATGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATg > 2:713540/1‑100 (MQ=255)
aTGAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCg < 1:2277478/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc < 2:2958783/100‑1 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc > 1:2509385/1‑100 (MQ=255)
gAAACAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGAc > 2:2348694/1‑100 (MQ=255)
aaaCAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACt > 1:2251302/1‑100 (MQ=255)
cAGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATg > 1:484162/1‑100 (MQ=255)
aGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa < 1:1114736/100‑1 (MQ=255)
aGGATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGa > 2:3052294/1‑100 (MQ=255)
ggATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa > 2:1702486/1‑100 (MQ=255)
ggATTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaa < 1:1316150/100‑1 (MQ=255)
gATTTATTGTGTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGaaa < 1:2014179/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:1660928/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 2:443510/100‑1 (MQ=255)
aTTTATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:1273990/100‑1 (MQ=255)
ttATTGTATGTTCATCAT‑T‑AAACA‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAAc < 1:2594098/98‑1 (MQ=255)
tATTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAt < 2:1272835/100‑1 (MQ=255)
aTTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 1:265779/1‑100 (MQ=255)
aTTGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTAtt > 2:70448/1‑100 (MQ=255)
ttGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtc < 2:1877197/100‑1 (MQ=255)
tGTCTGTTCATCAT‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATtct < 2:396179/100‑1 (MQ=255)
catcat‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGaa > 1:1169332/1‑100 (MQ=255)
atcat‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAAt < 2:2871436/100‑1 (MQ=255)
tcat‑TAAAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATg > 2:809699/1‑100 (MQ=255)
|
GATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCAT‑T‑AAA‑A‑AAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATG > NC_000913/4494782‑4494970
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
