Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F71 I1 R1 21 57.4 2535598 87.8% 2226255 142.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,184,543 C→A P1100Q (CCG→CAG)  rpoB → RNA polymerase subunit beta

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,184,5430CA98.4% 178.7 / NA 63P1100Q (CCG→CAG) rpoBRNA polymerase subunit beta
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base A (31/30);  total (32/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAG  >  NC_000913/4184406‑4184682
                                                                                                                                         |                                                                                                                                           
ggCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTgg                                                                                                                                        >  1:522055/1‑143 (MQ=255)
  gggTTAAACGCCGTATCCAGCCGGGTTACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGc                                                                                                                                      <  2:28856/142‑1 (MQ=255)
  ctgTTAAACGCCGTATCCAGCCTGGTGACATGATGTCAGGTCGTTACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGc                                                                                                                                      <  1:676015/141‑1 (MQ=255)
   ggTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTATGCTCAACCCGATCGAAGATATACCTTACAATGAAAACGATACGCCGGTAGACATATTACTGAATCAGCTGGGCg                                                                                                                                     >  1:98617/1‑143 (MQ=255)
        aaCGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCg                                                                                                                                >  2:967314/1‑143 (MQ=255)
         aCGCCGTATCCAGCCTGGTGACAATATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt                                                                                                                               <  1:956255/143‑1 (MQ=255)
         aCGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATAAAAACGGTACGACGGTAAACATCGTACTGAACCAGCTGGGCGTaaagt                                                                                                                               >  1:1046781/1‑139 (MQ=255)
           gCCGTATCCAGCCTGGTGACAAGATGGCAGGTAGACACGGAAACAAGGGTGAAATTTCTCAGATGAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACGGAACGCGCTGGGCGTAGCGgct                                                                                                                             >  2:856895/1‑143 (MQ=255)
            ccGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGAAATAGTACTGAACCAGCTAGACGTACCGtctc                                                                                                                            >  2:698810/1‑143 (MQ=255)
             cGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAACTGGGCGTACCGTCTCg                                                                                                                           >  2:548957/1‑143 (MQ=255)
             cGTAGCGAGCATGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCg                                                                                                                           <  2:708903/143‑1 (MQ=255)
               tATCCAGCCTGTTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTa                                                                                                                         <  1:666080/143‑1 (MQ=255)
                 tCCAGCCTGGTGACAAGATGGCAGGTCGTTACGGTAACAAGGGTGTAATTTCTAAGATCATCCCGATCGAAGAGATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATg                                                                                                                       <  1:357104/143‑1 (MQ=255)
                     gCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGAGTAATTTATAAGATCAACACGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACAGAACCAGCTGGGCGTACCGTATAGTATGaaaa                                                                                                                   >  2:722635/1‑141 (MQ=255)
                          gTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGCCTCGTATCAACCTCgga                                                                                                              >  2:811519/1‑142 (MQ=255)
                                aGATGGCAGGTCGTCACGTTAACAAGGTTGTATTTTCTAAGTTCTTTCTTATCTATGTTATGCCTTAGGATGAAAGCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATc                                                                                                        <  1:53084/143‑1 (MQ=255)
                                 gATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAAACAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATcc                                                                                                       >  1:1237871/1‑143 (MQ=255)
                                  aTGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGATGGGCGTACAGTCTCGTATGAACATCGGTCAGAACCt                                                                                                      >  1:601449/1‑143 (MQ=255)
                                   tgacAGGGCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCTAATATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTc                                                                                                     <  1:308895/140‑1 (MQ=255)
                                   tGGCAGGTCGTGACGTTAACAAGGGTTTAATTTTTAAGATTAACCCGATCGAAGATATGCCTTACGATGGAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTc                                                                                                     <  1:408846/143‑1 (MQ=255)
                                       aGGTCGTCATGGTAACAAGGGTGTAATTTCTAAGATTAATCCTATCTAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACAGCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGaaa                                                                                                 <  1:811639/143‑1 (MQ=255)
                                       aGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGACGTAACGTCTCGTATGAAACTCGGTCAGATCCTCCaaa                                                                                                 >  2:767201/1‑143 (MQ=255)
                                            gtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCAc                                                                                            <  2:335847/143‑1 (MQ=255)
                                             tcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCAcc                                                                                           >  1:173697/1‑143 (MQ=255)
                                                cGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTgg                                                                                        <  1:421514/143‑1 (MQ=255)
                                                 gttAACATGGGTGTAATTTCTACGATCAACCCGATCGAAGATATGCTTTACTATTAAACCGGTACGCCGGTAGACATCGTACGGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTggg                                                                                       <  2:358171/141‑1 (MQ=255)
                                                 gggaaCAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTggg                                                                                       <  2:213312/140‑1 (MQ=255)
                                                 ggTAACGAGGGTGTAATGTCTGAGATCAACCCGATCGATGATATGCCTTACGATGAAAGCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGTCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTggg                                                                                       <  2:845197/143‑1 (MQ=255)
                                                 ggTAACAAGGGTGTAGTTTCTACGACCAACCCGATCGAATATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTggg                                                                                       <  2:398849/143‑1 (MQ=255)
                                                  gcaaCAAGGGTGTAATTTCTAAGATCATTCCGATCTAAGATATGCCTTACGATGAAAACGTTACGCCGGTAGACAACGAACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGt                                                                                      <  1:344481/141‑1 (MQ=255)
                                                      cAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATgg                                                                                  <  1:529136/143‑1 (MQ=255)
                                                          ggTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGGCAGATCCTCGATACCCACCTGGGTATGGCTGc                                                                              <  2:636561/143‑1 (MQ=255)
                                                           gtgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCg                                                                             >  2:468323/1‑143 (MQ=255)
                                                            tgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCGACCTGGGTATGGCTGCGa                                                                            >  2:549740/1‑143 (MQ=255)
                                                              tAATTTCTAAGATCAACCCGATCGACGTTTTTTTTTGCGATTAAAACGTTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGaaa                                                                          <  1:1187964/143‑1 (MQ=255)
                                                              tAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGAGTGCTGGCGACAAGAAACATCGGTCAGATCCTCGAAACCAACCTGGGTATGGCTGCGaaa                                                                          >  1:557497/1‑143 (MQ=255)
                                                                 tttCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAACCGGTTCGCCTGTAGACATCGTACTGAACCAAAAGAGCGAACCGTCAAGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGGAAGGt                                                                       >  1:297558/1‑143 (MQ=255)
                                                                         atgtaCCTGATCGAATATATGCCGTACTCTGAAGACGGTACGCCGGTAGACAGCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCTGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGa                                                               <  2:363121/139‑1 (MQ=255)
                                                                         aTCAATCCCATCGAAGTTATTCCTTACGATGAAATCGGTTCGCTGTTAGTCATCTTATTGAACCAGCTAGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGa                                                               <  1:142260/143‑1 (MQ=255)
                                                                          tCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTCGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGATATGGCTGCAAAAAGTATCGGCGAc                                                              >  1:1094971/1‑143 (MQ=255)
                                                                               ccGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTTAACCAGCTGGGCGTACCGTCACGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGAt                                                         <  1:634671/143‑1 (MQ=255)
                                                                               ccGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGGACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCAGGGTATGGCTGCGAAAGGTAACGCCGACAAGAt                                                         >  1:634740/1‑143 (MQ=255)
                                                                                     gAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACCTCGGTCCGTTCCCCGAACCCCCCCTGCGTATGGCTGCGAAAAATATCTGCGACAAGaaaaacac                                                   >  1:706755/1‑136 (MQ=255)
                                                                                         atatGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCGACCTCGGTATGGCTGAGAAAGGTATAGGCGACAAAATCAAAGCTATg                                               >  1:761545/1‑143 (MQ=255)
                                                                                         atatGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCACGAATGCACACCGGACAAATCATCAAAACCCAACTGGATCTGACTGCGAAACGCATAAACGACAAGAACACAGCCaaa                                               >  2:590822/1‑141 (MQ=255)
                                                                                         atatGCCTTACCAGGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATg                                               <  2:277610/143‑1 (MQ=255)
                                                                                           atGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTc                                                                                                     <  1:306700/87‑1 (MQ=255)
                                                                                           atGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTc                                                                                                     >  2:306700/1‑87 (MQ=255)
                                                                                           atGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGTGAAAGGTATCGACGACAAGATCAACGCCATGCt                                             >  2:930736/1‑143 (MQ=255)
                                                                                             gCCTGACTATGAATTCGGTACGCCGGTATACATCGTACTGAACCAGCTGGGCGTCCCCGTTCGTATGAACATCGGTCAGATCCTTGACACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGa                                           <  2:1088855/143‑1 (MQ=255)
                                                                                              ccTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGaa                                          >  1:1090444/1‑143 (MQ=255)
                                                                                                    gATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAATGGATCGGCGACAAGATCAACGCCATGCTGAAAcacca                                    >  2:237358/1‑143 (MQ=255)
                                                                                                    gATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCAGAGAAAGGTATAGGCGACAAGATCAACGACATGCTGAAAcagca                                    >  1:494429/1‑143 (MQ=255)
                                                                                                     aTGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGACGACAAGATCAACGCCATGCTGAAAcagcag                                   <  1:468323/143‑1 (MQ=255)
                                                                                                         aaaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACCGCAGCaag                               >  1:1016125/1‑143 (MQ=255)
                                                                                                                    cGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTAGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGaaa                    <  2:135979/143‑1 (MQ=255)
                                                                                                                      gTATACATCGGTCTGAACTAGCTGGGCGTAGCGTCTCGTATGAACCTCGGTCAGAGCCTCGAAACCCACCTGGGTATGGCTGGGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACt                  <  2:103972/143‑1 (MQ=255)
                                                                                                                          aCATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGTCATTCTCAAACAGCAGCAAGAAGTCGCGAAACTgcgc              >  2:530553/1‑143 (MQ=255)
                                                                                                                            aTCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCAGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGa            >  1:932022/1‑143 (MQ=255)
                                                                                                                             tCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCGAGAAGTCGCGAAACTGCGCGaa           >  2:344732/1‑143 (MQ=255)
                                                                                                                              tgtgcggAACCGGCTGGGCGTACTGTCTTGTAGTGACGTCGGTCGTATCCTCGAAACTCGCCTGGGTATTGCTGCGAACGGGATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAAt          <  2:1156377/137‑1 (MQ=255)
                                                                                                                                 aCTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCa       >  2:1218317/1‑143 (MQ=255)
                                                                                                                                      aCCAGCTGGGTGTACCGTCTCGTATGATCATCGGTCAGATCCTCGATACCCACCTGGGTATGGCTGCTAGAGGTATCTGCGACCAGATCAATGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAg  <  2:19410/143‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                           
GGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAG  >  NC_000913/4184406‑4184682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A