breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
RA | 50,280 | T→C | F153S (TTT→TCT) | folA → | type 3 dihydrofolate reductase |
RA | 726,489 | A→G | E484G (GAA→GGA) | rhsC → | rhs element protein RhsC |
RA | 1,613,687 | G→T | G104V (GGC→GTC) | marR → | multiple antibiotic resistance transcriptional regulator MarR |
MC JC | 2,399,465 | Δ7 bp | coding (650‑656/939 nt) | lrhA ← | transcriptional regulator LrhA |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NZ_CP009273 | 129125 | 129146 | 22 | 2 [1] | [1] 2 | acnB | bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase |
* | * | ÷ | NZ_CP009273 | 152720 | 152786 | 67 | 2 [1] | [1] 5 | [yadN] | [yadN] |
* | * | ÷ | NZ_CP009273 | 153615 | 153705 | 91 | 4 [1] | [1] 2 | yadN/folK | fimbrial protein/2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase |
* | * | ÷ | NZ_CP009273 | 235240 | 235272 | 33 | 2 [0] | [1] 3 | BW25113_RS01100 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 235379 | 235394 | 16 | 2 [0] | [1] 2 | BW25113_RS01100 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 356981 | 357574 | 594 | 4 [0] | [1] 3 | [lacA] | [lacA] |
* | * | ÷ | NZ_CP009273 | 396612 | 396681 | 70 | 3 [1] | [1] 2 | [BW25113_RS25915] | [BW25113_RS25915] |
* | * | ÷ | NZ_CP009273 | 420893 | 420928 | 36 | 2 [1] | [0] 2 | queA | tRNA preQ1(34) S‑adenosylmethionine ribosyltransferase‑isomerase QueA |
* | * | ÷ | NZ_CP009273 | 428507 | 428557 | 51 | 2 [1] | [1] 2 | nrdR | transcriptional regulator NrdR |
* | * | ÷ | NZ_CP009273 | 537873 | 537912 | 40 | 2 [1] | [1] 2 | glxK | glycerate 3‑kinase |
* | * | ÷ | NZ_CP009273 | 554421 | 554456 | 36 | 2 [1] | [1] 2 | [fimC] | [fimC] |
* | * | ÷ | NZ_CP009273 | 567085 | 567103 | 19 | 2 [1] | [0] 2 | ybcM | helix‑turn‑helix transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 575244 | 575249 | 6 | 2 [0] | [1] 3 | ybcV/BW25113_RS02885 | DUF1398 domain‑containing protein/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 578902 | 579073 | 172 | 2 [1] | [1] 3 | BW25113_RS26085/appY | tail fiber assembly protein/DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 603115 | 603143 | 29 | 2 [0] | [1] 2 | ybdK/hokE | YbdK family carboxylate‑amine ligase/type I toxin‑antitoxin system toxin HokE |
* | * | ÷ | NZ_CP009273 | 613541 | 613571 | 31 | 2 [1] | [0] 2 | entF/wzz(fepE) | enterobactin non‑ribosomal peptide synthetase EntF/LPS O‑antigen length regulator Wzz(fepE) |
* | * | ÷ | NZ_CP009273 | 613811 | 613833 | 23 | 2 [0] | [1] 2 | wzz(fepE) | LPS O‑antigen length regulator Wzz(fepE) |
* | * | ÷ | NZ_CP009273 | 647320 | 647330 | 11 | 2 [1] | [1] 2 | citC/dpiB | [citrate (pro‑3S)‑lyase] ligase/sensor histidine kinase DpiB |
* | * | ÷ | NZ_CP009273 | 671951 | 671966 | 16 | 2 [0] | [1] 3 | ybeQ | SEL1‑like repeat protein |
* | * | ÷ | NZ_CP009273 | 674798 | 674866 | 69 | 5 [1] | [1] 3 | [ybeT] | [ybeT] |
* | * | ÷ | NZ_CP009273 | 716369 | 716538 | 170 | 2 [0] | [1] 2 | [kdpE] | [kdpE] |
* | * | ÷ | NZ_CP009273 | 724902 | 724945 | 44 | 2 [1] | [1] 2 | ybfA/rhsC | YbfA family protein/rhs element protein RhsC |
* | * | ÷ | NZ_CP009273 | 731726 | 731738 | 13 | 2 [1] | [1] 3 | BW25113_RS03640/ybfQ | hypothetical protein/ISAs1 family transposase |
* | * | ÷ | NZ_CP009273 | 748404 | 748426 | 23 | 2 [1] | [0] 2 | ybgD/gltA | fimbrial protein/citrate synthase |
* | * | ÷ | NZ_CP009273 | 750463 | 750507 | 45 | 2 [1] | [0] 2 | BW25113_RS25495/sdhC | hypothetical protein/succinate dehydrogenase cytochrome b556 subunit |
* | * | ÷ | NZ_CP009273 | 751340 | 751358 | 19 | 2 [1] | [1] 2 | sdhD | succinate dehydrogenase membrane anchor subunit |
* | * | ÷ | NZ_CP009273 | 760461 | 760503 | 43 | 2 [1] | [1] 2 | sucD | succinate‑‑CoA ligase subunit alpha |
* | * | ÷ | NZ_CP009273 | 763139 | 763179 | 41 | 2 [1] | [1] 2 | mngA | PTS 2‑O‑a‑mannosyl‑D‑glycerate transporter subunit IIABC |
* | * | ÷ | NZ_CP009273 | 766476 | 766564 | 89 | 2 [1] | [1] 2 | mngB/cydA | mannosylglycerate hydrolase/cytochrome ubiquinol oxidase subunit I |
* | * | ÷ | NZ_CP009273 | 772240 | 772271 | 32 | 2 [0] | [1] 3 | tolA | cell envelope integrity protein TolA |
* | * | ÷ | NZ_CP009273 | 805986 | 805986 | 1 | 2 [0] | [0] 3 | bioF | 8‑amino‑7‑oxononanoate synthase |
* | * | ÷ | NZ_CP009273 | 817993 | 818031 | 39 | 3 [1] | [1] 2 | clsB | cardiolipin synthase ClsB |
* | * | ÷ | NZ_CP009273 | 819307 | 819320 | 14 | 2 [0] | [0] 3 | ybhP | endonuclease/exonuclease/phosphatase family protein |
* | * | ÷ | NZ_CP009273 | 836900 | 836970 | 71 | 2 [1] | [1] 2 | fiu | catecholate siderophore receptor Fiu |
* | * | ÷ | NZ_CP009273 | 837159 | 837264 | 106 | 2 [1] | [1] 3 | [mcbA] | [mcbA] |
* | * | ÷ | NZ_CP009273 | 844185 | 844240 | 56 | 2 [1] | [1] 2 | dps | DNA starvation/stationary phase protection protein Dps |
* | * | ÷ | NZ_CP009273 | 845863 | 845897 | 35 | 2 [1] | [1] 2 | BW25113_RS25505/ompX | protein YliM/outer membrane protein OmpX |
* | * | ÷ | NZ_CP009273 | 902983 | 902992 | 10 | 2 [1] | [0] 2 | ybjT | SDR family oxidoreductase |
* | * | ÷ | NZ_CP009273 | 903029 | 903078 | 50 | 2 [0] | [1] 2 | ybjT | SDR family oxidoreductase |
* | * | ÷ | NZ_CP009273 | 967338 | 967393 | 56 | 2 [0] | [1] 3 | ycbJ | YcbJ family phosphotransferase |
* | * | ÷ | NZ_CP009273 | 972859 | 972873 | 15 | 2 [1] | [0] 2 | mukB | chromosome partition protein MukB |
* | * | ÷ | NZ_CP009273 | 992975 | 993158 | 184 | 3 [1] | [1] 2 | ssuE/elfA | NADPH‑dependent FMN reductase/fimbrial protein |
* | * | ÷ | NZ_CP009273 | 1006986 | 1006996 | 11 | 2 [1] | [1] 2 | uup | ABC transporter ATP‑binding protein |
* | * | ÷ | NZ_CP009273 | 1023298 | 1023308 | 11 | 3 [1] | [1] 3 | yccT/yccU | DUF2057 family protein/CoA‑binding protein |
* | * | ÷ | NZ_CP009273 | 1028551 | 1028562 | 12 | 2 [1] | [0] 2 | hyaA | hydrogenase 1 small subunit |
* | * | ÷ | NZ_CP009273 | 1039726 | 1039774 | 49 | 2 [0] | [1] 3 | etp | protein‑tyrosine‑phosphatase Etp |
* | * | ÷ | NZ_CP009273 | 1044774 | 1044806 | 33 | 2 [1] | [1] 2 | [gfcB] | [gfcB] |
* | * | ÷ | NZ_CP009273 | 1046254 | 1046264 | 11 | 2 [0] | [1] 3 | BW25113_RS05135/cspH | IS1‑like element IS1D family transposase/cold shock‑like protein CspH |
* | * | ÷ | NZ_CP009273 | 1061795 | 1061854 | 60 | 2 [1] | [1] 3 | agp | bifunctional glucose‑1‑phosphatase/inositol phosphatase |
* | * | ÷ | NZ_CP009273 | 1063792 | 1063836 | 45 | 2 [1] | [1] 3 | ymdF/rutG | general stress protein/pyrimidine utilization transport protein G |
* | * | ÷ | NZ_CP009273 | 1077442 | 1077469 | 28 | 2 [0] | [0] 2 | BW25113_RS05295 | FTR1 family protein |
* | * | ÷ | NZ_CP009273 | 1088096 | 1088171 | 76 | 4 [1] | [1] 2 | pgaA/dgcT | poly‑beta‑1,6 N‑acetyl‑D‑glucosamine export porin PgaA/GGDEF domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1095428 | 1095454 | 27 | 2 [0] | [0] 2 | ycdY | molecular chaperone YcdY |
* | * | ÷ | NZ_CP009273 | 1098886 | 1098983 | 98 | 3 [1] | [1] 2 | csgD/csgB | biofilm master transcriptional regulator CsgD/curli minor subunit CsgB |
* | * | ÷ | NZ_CP009273 | 1109537 | 1109580 | 44 | 2 [1] | [1] 2 | msyB | acidic protein MsyB |
* | * | ÷ | NZ_CP009273 | 1120834 | 1120859 | 26 | 2 [1] | [1] 2 | mdtH/rimJ | multidrug efflux MFS transporter MdtH/ribosomal protein S5‑alanine N‑acetyltransferase |
* | * | ÷ | NZ_CP009273 | 1144311 | 1144408 | 98 | 2 [1] | [1] 2 | fabH | beta‑ketoacyl‑ACP synthase III |
* | * | ÷ | NZ_CP009273 | 1159763 | 1159791 | 29 | 2 [1] | [1] 2 | nagZ | beta‑N‑acetylhexosaminidase |
* | * | ÷ | NZ_CP009273 | 1164414 | 1164451 | 38 | 2 [1] | [0] 2 | comR/bhsA | TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA |
* | * | ÷ | NZ_CP009273 | 1171963 | 1171973 | 11 | 2 [0] | [0] 2 | lolC | lipoprotein‑releasing ABC transporter permease subunit LolC |
* | * | ÷ | NZ_CP009273 | 1172325 | 1172325 | 1 | 2 [0] | [0] 2 | lolD | lipoprotein‑releasing ABC transporter ATP‑binding protein LolD |
* | * | ÷ | NZ_CP009273 | 1187236 | 1187278 | 43 | 2 [1] | [1] 2 | purB | adenylosuccinate lyase |
* | * | ÷ | NZ_CP009273 | 1187964 | 1187964 | 1 | 2 [0] | [0] 3 | hflD | high frequency lysogenization protein HflD |
* | * | ÷ | NZ_CP009273 | 1192282 | 1192311 | 30 | 2 [1] | [1] 2 | icd/ymfD | NADP‑dependent isocitrate dehydrogenase/class I SAM‑dependent methyltransferase |
* | * | ÷ | NZ_CP009273 | 1193122 | 1193222 | 101 | 2 [0] | [1] 2 | BW25113_RS05920 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1205763 | 1205806 | 44 | 3 [1] | [1] 4 | [mcrA] | [mcrA] |
* | * | ÷ | NZ_CP009273 | 1206611 | 1206671 | 61 | 4 [1] | [0] 2 | [mcrA] | [mcrA] |
* | * | ÷ | NZ_CP009273 | 1206717 | 1206786 | 70 | 2 [0] | [1] 2 | mcrA/BW25113_RS23640 | 5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase |
* | * | ÷ | NZ_CP009273 | 1207103 | 1207135 | 33 | 2 [0] | [1] 3 | BW25113_RS23640/iraM | isocitrate/isopropylmalate family dehydrogenase/anti‑adapter protein IraM |
* | * | ÷ | NZ_CP009273 | 1207528 | 1207598 | 71 | 3 [0] | [0] 2 | iraM/BW25113_RS25985 | anti‑adapter protein IraM/protein YmgK |
* | * | ÷ | NZ_CP009273 | 1207819 | 1207841 | 23 | 2 [1] | [0] 2 | BW25113_RS25985/BW25113_RS25535 | protein YmgK/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1208178 | 1208194 | 17 | 2 [1] | [1] 2 | ycgX | DUF1398 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1211769 | 1211847 | 79 | 2 [1] | [1] 2 | [ymgA]–[ariR] | [ymgA],[ariR] |
* | * | ÷ | NZ_CP009273 | 1225861 | 1225956 | 96 | 2 [1] | [1] 2 | hlyE/umuD | hemolysin HlyE/translesion error‑prone DNA polymerase V autoproteolytic subunit |
* | * | ÷ | NZ_CP009273 | 1241933 | 1241947 | 15 | 2 [1] | [1] 2 | treA | alpha,alpha‑trehalase |
* | * | ÷ | NZ_CP009273 | 1264874 | 1264929 | 56 | 2 [1] | [1] 3 | BW25113_RS06330/BW25113_RS06335 | type I toxin‑antitoxin system toxin Ldr family protein/type I toxin‑antitoxin system toxin Ldr family protein |
* | * | ÷ | NZ_CP009273 | 1294947 | 1294977 | 31 | 2 [0] | [1] 5 | BW25113_RS25865 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1295556 | 1295570 | 15 | 2 [1] | [0] 2 | oppA | oligopeptide ABC transporter substrate‑binding protein OppA |
* | * | ÷ | NZ_CP009273 | 1305060 | 1305088 | 29 | 2 [1] | [1] 2 | yciI | YciI family protein |
* | * | ÷ | NZ_CP009273 | 1305341 | 1305435 | 95 | 2 [1] | [1] 4 | [tonB] | [tonB] |
* | * | ÷ | NZ_CP009273 | 1320673 | 1320697 | 25 | 4 [0] | [1] 2 | yciQ | DUF2207 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1320879 | 1320939 | 61 | 2 [1] | [1] 4 | [yciQ] | [yciQ] |
* | * | ÷ | NZ_CP009273 | 1326910 | 1326932 | 23 | 3 [1] | [0] 2 | topA | type I DNA topoisomerase |
* | * | ÷ | NZ_CP009273 | 1329510 | 1329543 | 34 | 2 [1] | [0] 2 | ymiA | YmiA family putative membrane protein |
* | * | ÷ | NZ_CP009273 | 1329968 | 1329978 | 11 | 2 [1] | [1] 3 | BW25113_RS25560/acnA | hypothetical protein/aconitate hydratase AcnA |
* | * | ÷ | NZ_CP009273 | 1330141 | 1330161 | 21 | 2 [1] | [1] 3 | acnA | aconitate hydratase AcnA |
* | * | ÷ | NZ_CP009273 | 1335820 | 1335831 | 12 | 2 [0] | [1] 2 | lapB | lipopolysaccharide assembly protein LapB |
* | * | ÷ | NZ_CP009273 | 1340024 | 1340035 | 12 | 2 [0] | [1] 3 | pdeR | cyclic di‑GMP phosphodiesterase |
* | * | ÷ | NZ_CP009273 | 1341099 | 1341111 | 13 | 2 [1] | [1] 4 | BW25113_RS25050 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1346187 | 1346197 | 11 | 2 [1] | [0] 3 | sapF | peptide ABC transporter ATP‑binding protein SapF |
* | * | ÷ | NZ_CP009273 | 1354433 | 1354462 | 30 | 3 [1] | [1] 2 | puuA | glutamate‑putrescine ligase |
* | * | ÷ | NZ_CP009273 | 1362239 | 1362249 | 11 | 2 [1] | [0] 2 | pspF/pspA | phage shock protein operon transcriptional activator/phage shock protein PspA |
* | * | ÷ | NZ_CP009273 | 1366947 | 1367015 | 69 | 2 [1] | [1] 2 | ycjN | ABC transporter substrate‑binding protein |
* | * | ÷ | NZ_CP009273 | 1367168 | 1367192 | 25 | 2 [1] | [1] 2 | ycjN | ABC transporter substrate‑binding protein |
* | * | ÷ | NZ_CP009273 | 1375568 | 1375583 | 16 | 2 [1] | [0] 2 | BW25113_RS06905 | ABC transporter ATP‑binding protein |
* | * | ÷ | NZ_CP009273 | 1376122 | 1376147 | 26 | 2 [0] | [1] 2 | BW25113_RS06905 | ABC transporter ATP‑binding protein |
* | * | ÷ | NZ_CP009273 | 1380929 | 1380980 | 52 | 5 [1] | [1] 3 | [tyrR] | [tyrR] |
* | * | ÷ | NZ_CP009273 | 1387435 | 1387467 | 33 | 2 [1] | [1] 3 | pgrR/mppA | DNA‑binding transcriptional regulator PgrR/murein tripeptide ABC transporter substrate‑binding protein MppA |
* | * | ÷ | NZ_CP009273 | 1390142 | 1390165 | 24 | 2 [1] | [1] 2 | ynaI | low conductance mechanosensitive channel YnaI |
* | * | ÷ | NZ_CP009273 | 1396290 | 1396290 | 1 | 3 [0] | [0] 2 | abgB | p‑aminobenzoyl‑glutamate hydrolase subunit AbgB |
* | * | ÷ | NZ_CP009273 | 1403132 | 1403166 | 35 | 2 [1] | [1] 2 | zntB | zinc transporter ZntB |
* | * | ÷ | NZ_CP009273 | 1405065 | 1405133 | 69 | 3 [1] | [1] 2 | dbpA | ATP‑dependent RNA helicase DbpA |
* | * | ÷ | NZ_CP009273 | 1418041 | 1418060 | 20 | 2 [1] | [0] 2 | trkG | Trk system potassium transporter TrkG |
* | * | ÷ | NZ_CP009273 | 1427981–1428239 | 1428297–1428260 | 22–317 | 3 [1] | [1] 3 | [ydfK] | [ydfK] |
* | * | ÷ | NZ_CP009273 | 1433910 | 1433919 | 10 | 2 [1] | [1] 3 | nifJ | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
* | * | ÷ | NZ_CP009273 | 1438991 | 1439001 | 11 | 2 [0] | [1] 3 | ydbH | YdbH family protein |
* | * | ÷ | NZ_CP009273 | 1454108 | 1454131 | 24 | 2 [0] | [1] 2 | paaC | 3‑hydroxyacyl‑CoA dehydrogenase PaaC |
* | * | ÷ | NZ_CP009273 | 1459415 | 1459555 | 141 | 2 [1] | [1] 3 | BW25113_RS25580 | BW25113_RS25580 |
* | * | ÷ | NZ_CP009273 | 1470196 | 1470226 | 31 | 2 [1] | [1] 2 | ydbD | DUF2773 domain‑containing bactofilin |
* | * | ÷ | NZ_CP009273 | 1489194 | 1489225 | 32 | 4 [1] | [1] 2 | ydcI | LysR substrate‑binding domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1521730 | 1521817 | 88 | 2 [0] | [1] 2 | yncH/BW25113_RS07645 | YncH family protein/RHS repeat protein |
* | * | ÷ | NZ_CP009273 | 1524076 | 1524099 | 24 | 2 [1] | [1] 2 | BW25113_RS07645 | RHS repeat protein |
* | * | ÷ | NZ_CP009273 | 1524458 | 1524550 | 93 | 2 [1] | [1] 2 | BW25113_RS26145 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1525828 | 1526017 | 190 | 3 [1] | [1] 2 | [BW25113_RS07655] | [BW25113_RS07655] |
* | * | ÷ | NZ_CP009273 | 1537609 | 1537652 | 44 | 2 [1] | [1] 2 | narU | nitrate/nitrite transporter NarU |
* | * | ÷ | NZ_CP009273 | 1538801 | 1538825 | 25 | 2 [1] | [1] 3 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1539124 | 1539155 | 32 | 2 [0] | [1] 2 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1539483 | 1539515 | 33 | 2 [1] | [1] 5 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1543879 | 1543888 | 10 | 4 [0] | [0] 2 | fdnG | formate dehydrogenase‑N subunit alpha |
* | * | ÷ | NZ_CP009273 | 1558639 | 1558667 | 29 | 3 [1] | [1] 2 | dosP | oxygen‑sensing cyclic‑di‑GMP phosphodiesterase |
* | * | ÷ | NZ_CP009273 | 1570324 | 1570340 | 17 | 2 [1] | [0] 2 | yddB | TonB‑dependent receptor plug domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1572277 | 1572337 | 61 | 2 [1] | [1] 2 | yddA | ABC transporter ATP‑binding protein/permease |
* | * | ÷ | NZ_CP009273 | 1573642 | 1573691 | 50 | 3 [1] | [1] 2 | yddA/BW25113_RS25610 | ABC transporter ATP‑binding protein/permease/protein YneP |
* | * | ÷ | NZ_CP009273 | 1577936 | 1577961 | 26 | 2 [0] | [1] 2 | [ydeO] | [ydeO] |
* | * | ÷ | NZ_CP009273 | 1578265 | 1578275 | 11 | 2 [0] | [1] 2 | safA/ydeP | two‑component system connector SafA/acid resistance putative oxidoreductase YdeP |
* | * | ÷ | NZ_CP009273 | 1580446 | 1580457 | 12 | 2 [1] | [1] 2 | ydeP | acid resistance putative oxidoreductase YdeP |
* | * | ÷ | NZ_CP009273 | 1580831 | 1580975 | 145 | 2 [1] | [1] 3 | ydeP/ydeQ | acid resistance putative oxidoreductase YdeP/fimbrial protein |
* | * | ÷ | NZ_CP009273 | 1592531 | 1592622 | 92 | 2 [1] | [1] 2 | BW25113_RS07915/lsrK | ECSE_1600 family autotransporter/autoinducer‑2 kinase |
* | * | ÷ | NZ_CP009273 | 1618574 | 1618648 | 75 | 3 [1] | [1] 2 | ydeI | YdeI family stress tolerance OB fold protein |
* | * | ÷ | NZ_CP009273 | 1618937 | 1618994 | 58 | 2 [1] | [1] 2 | ydeI/ydeJ | YdeI family stress tolerance OB fold protein/2‑oxo‑tetronate isomerase |
* | * | ÷ | NZ_CP009273 | 1625369 | 1625408 | 40 | 5 [1] | [1] 4 | ydfJ | MHS family MFS transporter |
* | * | ÷ | NZ_CP009273 | 1627504–1627550 | 1627848 | 299–345 | 2 [0] | [1] 2 | [ydfK] | [ydfK] |
* | * | ÷ | NZ_CP009273 | 1631352 | 1631430 | 79 | 2 [0] | [1] 2 | ydfO | DUF1398 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1631859 | 1632000 | 142 | 2 [1] | [1] 3 | [gnsB] | [gnsB] |
* | * | ÷ | NZ_CP009273 | 1632452 | 1632463 | 12 | 2 [1] | [1] 2 | BW25113_RS25620 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1632984 | 1633048 | 65 | 2 [1] | [1] 2 | cspI/rzpQ | cold shock protein CspI/DUF2514 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1633164 | 1633231 | 68 | 2 [1] | [1] 3 | cspI/rzpQ | cold shock protein CspI/DUF2514 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1646262 | 1646266 | 5 | 2 [0] | [0] 2 | BW25113_RS25635 | tyrosine‑type recombinase/integrase |
* | * | ÷ | NZ_CP009273 | 1650283 | 1650365 | 83 | 2 [1] | [1] 2 | ynfB | DUF1283 family protein |
* | * | ÷ | NZ_CP009273 | 1661467 | 1661477 | 11 | 2 [1] | [0] 2 | [bioD] | [bioD] |
* | * | ÷ | NZ_CP009273 | 1672454 | 1672466 | 13 | 2 [1] | [0] 2 | pntA/ydgH | Re/Si‑specific NAD(P)(+) transhydrogenase subunit alpha/DUF1471 family protein YdgH |
* | * | ÷ | NZ_CP009273 | 1687693 | 1687722 | 30 | 2 [1] | [1] 4 | uidB | glucuronide transporter |
* | * | ÷ | NZ_CP009273 | 1692714 | 1692781 | 68 | 2 [1] | [1] 4 | malI | mal regulon transcriptional regulator MalI |
* | * | ÷ | NZ_CP009273 | 1702909 | 1702962 | 54 | 2 [1] | [1] 2 | rsxC | electron transport complex subunit RsxC |
* | * | ÷ | NZ_CP009273 | 1703456 | 1703476 | 21 | 2 [1] | [1] 3 | rsxD | electron transport complex subunit RsxD |
* | * | ÷ | NZ_CP009273 | 1718657 | 1718688 | 32 | 2 [1] | [1] 2 | sodC | superoxide dismutase [Cu‑Zn] SodC |
* | * | ÷ | NZ_CP009273 | 1718779 | 1718816 | 38 | 2 [1] | [0] 2 | sodC | superoxide dismutase [Cu‑Zn] SodC |
* | * | ÷ | NZ_CP009273 | 1729344 | 1729372 | 29 | 2 [0] | [1] 2 | mepH | peptidoglycan DD‑endopeptidase MepH |
* | * | ÷ | NZ_CP009273 | 1735397 | 1735402 | 6 | 2 [0] | [1] 2 | punC/cfa | purine nucleoside transporter PunC/cyclopropane fatty acyl phospholipid synthase |
* | * | ÷ | NZ_CP009273 | 1739026 | 1739036 | 11 | 2 [0] | [0] 2 | mdtK | multidrug efflux MATE transporter MdtK |
* | * | ÷ | NZ_CP009273 | 1748958 | 1749026 | 69 | 2 [1] | [1] 2 | ydhY/fumD | ferredoxin‑like protein/fumarate hydratase FumD |
* | * | ÷ | NZ_CP009273 | 1749649 | 1749682 | 34 | 2 [0] | [1] 2 | fumD/BW25113_RS26160 | fumarate hydratase FumD/protein YnhH |
* | * | ÷ | NZ_CP009273 | 1764306 | 1764361 | 56 | 2 [1] | [1] 2 | ydiK | AI‑2E family transporter YdiK |
* | * | ÷ | NZ_CP009273 | 1764612 | 1764624 | 13 | 2 [0] | [1] 3 | ydiK/rprA | AI‑2E family transporter YdiK/antisense sRNA RprA |
* | * | ÷ | NZ_CP009273 | 1766953 | 1766968 | 16 | 3 [1] | [0] 2 | ydiN | MFS transporter |
* | * | ÷ | NZ_CP009273 | 1769805 | 1769842 | 38 | 2 [1] | [1] 2 | aroD/ydiF | type I 3‑dehydroquinate dehydratase/acyl CoA:acetate/3‑ketoacid CoA transferase |
* | * | ÷ | NZ_CP009273 | 1772885 | 1773009 | 125 | 2 [1] | [1] 2 | ydiP | AraC family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 1776085 | 1776107 | 23 | 3 [1] | [0] 2 | ydiS | FAD‑dependent oxidoreductase |
* | * | ÷ | NZ_CP009273 | 1776738 | 1776783 | 46 | 2 [1] | [0] 2 | ydiS | FAD‑dependent oxidoreductase |
* | * | ÷ | NZ_CP009273 | 1791177 | 1791209 | 33 | 5 [1] | [0] 2 | pheT | phenylalanine‑‑tRNA ligase subunit beta |
* | * | ÷ | NZ_CP009273 | 1796507 | 1796540 | 34 | 2 [1] | [1] 3 | thrS | threonine‑‑tRNA ligase |
* | * | ÷ | NZ_CP009273 | 1800287 | 1800333 | 47 | 2 [1] | [1] 2 | ydiY | YdiY family protein |
* | * | ÷ | NZ_CP009273 | 1802459 | 1802481 | 23 | 2 [1] | [1] 2 | yniA | fructosamine kinase family protein |
* | * | ÷ | NZ_CP009273 | 1823263 | 1823329 | 67 | 2 [1] | [1] 2 | astD | succinylglutamate‑semialdehyde dehydrogenase |
* | * | ÷ | NZ_CP009273 | 1824761 | 1824815 | 55 | 3 [1] | [1] 2 | astA | arginine N‑succinyltransferase |
* | * | ÷ | NZ_CP009273 | 1848419 | 1848430 | 12 | 3 [1] | [1] 2 | ydjF | DeoR/GlpR family DNA‑binding transcription regulator |
* | * | ÷ | NZ_CP009273 | 1848579 | 1848597 | 19 | 2 [1] | [1] 2 | ydjF | DeoR/GlpR family DNA‑binding transcription regulator |
* | * | ÷ | NZ_CP009273 | 1882752 | 1882801 | 50 | 2 [0] | [1] 2 | fadD | long‑chain‑fatty‑acid‑‑CoA ligase FadD |
* | * | ÷ | NZ_CP009273 | 1888074 | 1888140 | 67 | 2 [0] | [1] 2 | yoaB/yoaC | RidA family protein/DUF1889 family protein |
* | * | ÷ | NZ_CP009273 | 1894929 | 1894954 | 26 | 2 [0] | [1] 2 | yoaE | CNNM family cation transport protein YoaE |
* | * | ÷ | NZ_CP009273 | 1902247 | 1902307 | 61 | 3 [1] | [1] 2 | yobF/yebO | DUF2627 domain‑containing protein/YebO family protein |
* | * | ÷ | NZ_CP009273 | 1902393 | 1902400 | 8 | 2 [1] | [0] 2 | yobF/yebO | DUF2627 domain‑containing protein/YebO family protein |
* | * | ÷ | NZ_CP009273 | 1973022 | 1973100 | 79 | 2 [0] | [1] 2 | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
* | * | ÷ | NZ_CP009273 | 1975238 | 1975292 | 55 | 4 [1] | [1] 2 | otsB | trehalose‑phosphatase |
* | * | ÷ | NZ_CP009273 | 1981144 | 1981178 | 35 | 3 [1] | [0] 2 | yecJ | DUF2766 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1987203 | 1987303 | 101 | 2 [1] | [1] 3 | uvrC | excinuclease ABC subunit UvrC |
* | * | ÷ | NZ_CP009273 | 1999670 | 1999702 | 33 | 2 [1] | [0] 2 | amyA | alpha‑amylase |
* | * | ÷ | NZ_CP009273 | 2001040 | 2001099 | 60 | 2 [1] | [1] 2 | amyA | alpha‑amylase |
* | * | ÷ | NZ_CP009273 | 2033695 | 2033731 | 37 | 2 [1] | [0] 2 | msrP | protein‑methionine‑sulfoxide reductase catalytic subunit MsrP |
* | * | ÷ | NZ_CP009273 | 2051099 | 2051149 | 51 | 2 [1] | [1] 2 | yeeN/BW25113_RS10360 | YebC/PmpR family DNA‑binding transcriptional regulator/tRNA‑Asn |
* | * | ÷ | NZ_CP009273 | 2052542 | 2052588 | 47 | 2 [1] | [1] 3 | yeeO | toxic metabolite efflux MATE transporter YeeO |
* | * | ÷ | NZ_CP009273 | 2062043 | 2062082 | 40 | 2 [0] | [1] 2 | BW25113_RS10415/BW25113_RS24005 | IS5‑like element IS5 family transposase/TonB‑dependent receptor plug domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2091555 | 2091618 | 64 | 2 [1] | [1] 3 | wzzB | LPS O‑antigen chain length determinant protein WzzB |
* | * | ÷ | NZ_CP009273 | 2094854 | 2094864 | 11 | 2 [1] | [1] 2 | gndA/wbbL | NADP‑dependent phosphogluconate dehydrogenase/N‑acetylglucosaminyl‑diphospho‑decaprenol L‑rhamnosyltransferase WbbL |
* | * | ÷ | NZ_CP009273 | 2097483 | 2097640 | 158 | 2 [1] | [1] 3 | wbbK | glycosyltransferase family 1 protein |
* | * | ÷ | NZ_CP009273 | 2100259 | 2100268 | 10 | 2 [0] | [1] 4 | wzy | O16 family O‑antigen polymerase |
* | * | ÷ | NZ_CP009273 | 2101540 | 2101661 | 122 | 2 [1] | [1] 2 | glf | UDP‑galactopyranose mutase |
* | * | ÷ | NZ_CP009273 | 2144500 | 2144550 | 51 | 2 [1] | [1] 2 | yegI/yegJ | protein kinase YegI/DUF2314 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2152132 | 2152172 | 41 | 3 [1] | [0] 3 | mdtC | multidrug efflux RND transporter permease subunit MdtC |
* | * | ÷ | NZ_CP009273 | 2180586 | 2180591 | 6 | 2 [1] | [0] 2 | rcnB | Ni(II)/Co(II) efflux transporter accessory subunit RcnB |
* | * | ÷ | NZ_CP009273 | 2181886 | 2181907 | 22 | 2 [1] | [0] 2 | [yehA] | [yehA] |
* | * | ÷ | NZ_CP009273 | 2197687 | 2197781 | 95 | 2 [1] | [0] 2 | [BW25113_RS11050] | [BW25113_RS11050] |
* | * | ÷ | NZ_CP009273 | 2197822 | 2197831 | 10 | 2 [0] | [0] 2 | BW25113_RS11050/yehL | hypothetical protein/MoxR family ATPase |
* | * | ÷ | NZ_CP009273 | 2208279 | 2208293 | 15 | 3 [1] | [1] 2 | btsS/mlrA | two‑component regulatory system sensor histidine kinase BtsS/HTH‑type transcriptional regulator MlrA |
* | * | ÷ | NZ_CP009273 | 2211559 | 2211604 | 46 | 3 [0] | [1] 2 | yehY | glycine betaine ABC transporter permease YehY |
* | * | ÷ | NZ_CP009273 | 2297130 | 2297221 | 92 | 4 [1] | [1] 3 | BW25113_RS25870 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2300312 | 2300406 | 95 | 2 [1] | [0] 2 | mqo/yojI | malate dehydrogenase (quinone)/microcin J25 efflux ABC transporter YojI |
* | * | ÷ | NZ_CP009273 | 2357856 | 2357940 | 85 | 3 [1] | [1] 2 | yfaZ/nudI | YfaZ family protein/nucleoside triphosphatase NudI |
* | * | ÷ | NZ_CP009273 | 2370749 | 2370782 | 34 | 3 [1] | [1] 2 | menH | 2‑succinyl‑6‑hydroxy‑2, 4‑cyclohexadiene‑1‑carboxylate synthase |
* | * | ÷ | NZ_CP009273 | 2400583 | 2400640 | 58 | 2 [1] | [1] 2 | lrhA/alaA | transcriptional regulator LrhA/alanine transaminase AlaA |
* | * | ÷ | NZ_CP009273 | 2427491 | 2427509 | 19 | 2 [0] | [1] 2 | accD/dedA | acetyl‑CoA carboxylase, carboxyltransferase subunit beta/DedA family protein |
* | * | ÷ | NZ_CP009273 | 2449506 | 2449542 | 37 | 3 [1] | [1] 2 | yfcV/sixA | fimbrial protein/phosphohistidine phosphatase SixA |
* | * | ÷ | NZ_CP009273 | 2457727 | 2457757 | 31 | 2 [1] | [1] 2 | [mlaA] | [mlaA] |
* | * | ÷ | NZ_CP009273 | 2462773 | 2462851 | 79 | 3 [1] | [0] 2 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2462909 | 2463009 | 101 | 2 [0] | [1] 5 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2463160 | 2463237 | 78 | 2 [1] | [1] 2 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2463656 | 2463777 | 122 | 2 [1] | [1] 2 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2474106 | 2474159 | 54 | 6 [0] | [0] 2 | [emrY] | [emrY] |
* | * | ÷ | NZ_CP009273 | 2485336 | 2485388 | 53 | 2 [1] | [1] 2 | oxc | oxalyl‑CoA decarboxylase |
* | * | ÷ | NZ_CP009273 | 2505249 | 2505270 | 22 | 2 [0] | [1] 4 | mntH | Nramp family divalent metal transporter |
* | * | ÷ | NZ_CP009273 | 2539490 | 2539536 | 47 | 2 [1] | [1] 3 | murQ | N‑acetylmuramic acid 6‑phosphate etherase |
* | * | ÷ | NZ_CP009273 | 2601055 | 2601119 | 65 | 4 [0] | [1] 2 | hyfF | hydrogenase 4 subunit F |
* | * | ÷ | NZ_CP009273 | 2601622 | 2601678 | 57 | 2 [1] | [1] 2 | hyfF | hydrogenase 4 subunit F |
* | * | ÷ | NZ_CP009273 | 2616189 | 2616219 | 31 | 2 [1] | [0] 2 | purN | phosphoribosylglycinamide formyltransferase |
* | * | ÷ | NZ_CP009273 | 2647004 | 2647011 | 8 | 4 [1] | [0] 2 | sseA/timP | 3‑mercaptopyruvate sulfurtransferase/small toxic inner membrane protein TimP |
* | * | ÷ | NZ_CP009273 | 2669831 | 2669850 | 20 | 2 [1] | [1] 2 | yphD | ABC transporter permease |
* | * | ÷ | NZ_CP009273 | 2672270 | 2672338 | 69 | 2 [1] | [1] 2 | yphF | substrate‑binding domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2682200 | 2682268 | 69 | 2 [1] | [1] 2 | qseG | two‑component system QseEF‑associated lipoprotein QseG |
* | * | ÷ | NZ_CP009273 | 2699034 | 2699040 | 7 | 2 [1] | [0] 2 | lepA | translation elongation factor 4 |
* | * | ÷ | NZ_CP009273 | 2714582 | 2714597 | 16 | 2 [1] | [1] 2 | pat | protein lysine acetyltransferase |
* | * | ÷ | NZ_CP009273 | 2767044 | 2767078 | 35 | 6 [1] | [0] 5 | BW25113_RS13770 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2778842 | 2778854 | 13 | 2 [1] | [0] 2 | BW25113_RS25705/BW25113_RS13825 | DUF5507 domain‑containing protein/tRNA‑Ile |
* | * | ÷ | NZ_CP009273 | 2779678 | 2779760 | 83 | 3 [1] | [0] 4 | [BW25113_RS26005] | [BW25113_RS26005] |
* | * | ÷ | NZ_CP009273 | 2788233 | 2788239 | 7 | 2 [1] | [0] 2 | gabP | GABA permease |
* | * | ÷ | NZ_CP009273 | 2877656 | 2877676 | 21 | 2 [0] | [1] 2 | casA/cas3 | type I‑E CRISPR‑associated protein Cse1/CasA/CRISPR‑associated helicase/endonuclease Cas3 |
* | * | ÷ | NZ_CP009273 | 2898911 | 2899020 | 110 | 2 [1] | [1] 2 | [BW25113_RS14445] | [BW25113_RS14445] |
* | * | ÷ | NZ_CP009273 | 2984432 | 2984542 | 111 | 3 [1] | [1] 2 | BW25113_RS14825/ygeG | hypothetical protein/tetratricopeptide repeat protein |
* | * | ÷ | NZ_CP009273 | 2988554 | 2988681 | 128 | 2 [1] | [1] 2 | [BW25113_RS26010] | [BW25113_RS26010] |
* | * | ÷ | NZ_CP009273 | 3085703 | 3085721 | 19 | 2 [1] | [1] 3 | gshB | glutathione synthase |
* | * | ÷ | NZ_CP009273 | 3178610 | 3178750 | 141 | 2 [0] | [1] 2 | ubiK/ygiL | ubiquinone biosynthesis accessory factor UbiK/fimbrial‑like protein |
* | * | ÷ | NZ_CP009273 | 3247122 | 3247141 | 20 | 3 [1] | [1] 2 | yhaJ | DNA‑binding transcriptional regulator YhaJ |
* | * | ÷ | NZ_CP009273 | 3262641 | 3262702 | 62 | 3 [1] | [1] 2 | yhaC | YhaC family protein |
* | * | ÷ | NZ_CP009273 | 3280728 | 3280780 | 53 | 2 [1] | [1] 3 | agaI/yraH | galactosamine‑6‑phosphate isomerase/fimbrial protein |
* | * | ÷ | NZ_CP009273 | 3354257 | 3354290 | 34 | 3 [1] | [1] 3 | gltD/gltF | glutamate synthase subunit GltD/DUF1120 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 3371007 | 3371011 | 5 | 3 [0] | [1] 2 | sspA/rpsI | stringent starvation protein A/30S ribosomal protein S9 |
* | * | ÷ | NZ_CP009273 | 3463293 | 3463415 | 123 | 2 [0] | [1] 2 | chiA/tuf | bifunctional chitinase/lysozyme/elongation factor Tu |
* | * | ÷ | NZ_CP009273 | 3492766 | 3492782 | 17 | 2 [1] | [0] 2 | cysG/yhfL | siroheme synthase CysG/YhfL family protein |
* | * | ÷ | NZ_CP009273 | 3504378 | 3504392 | 15 | 2 [1] | [0] 3 | yhfX/yhfY | YhfX family PLP‑dependent enzyme/PRD domain protein |
* | * | ÷ | NZ_CP009273 | 3576543 | 3576548 | 6 | 3 [0] | [1] 3 | BW25113_RS17825 | YrhA family protein |
* | * | ÷ | NZ_CP009273 | 3720235 | 3720252 | 18 | 3 [1] | [1] 3 | [wecH] | [wecH] |
* | * | ÷ | NZ_CP009273 | 3745267 | 3745277 | 11 | 2 [0] | [1] 2 | yiaT/yiaU | MipA/OmpV family protein/LysR family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 3790425 | 3790465 | 41 | 2 [1] | [1] 2 | waaL | O‑antigen ligase |
* | * | ÷ | NZ_CP009273 | 3831805 | 3831819 | 15 | 2 [1] | [1] 4 | yicL | carboxylate/amino acid/amine transporter |
* | * | ÷ | NZ_CP009273 | 3996568 | 3996602 | 35 | 2 [0] | [1] 3 | [BW25113_RS19825] | [BW25113_RS19825] |
* | * | ÷ | NZ_CP009273 | 4225580 | 4225706 | 127 | 2 [1] | [1] 2 | pgi/yjbE | glucose‑6‑phosphate isomerase/exopolysaccharide production protein YjbE |
* | * | ÷ | NZ_CP009273 | 4240848 | 4240860 | 13 | 2 [0] | [1] 2 | BW25113_RS20970 | SopA family protein |
* | * | ÷ | NZ_CP009273 | 4241555 | 4241616 | 62 | 2 [0] | [1] 2 | BW25113_RS20970 | SopA family protein |
* | * | ÷ | NZ_CP009273 | 4306642 | 4306644 | 3 | 2 [0] | [1] 2 | phnM | alpha‑D‑ribose 1‑methylphosphonate 5‑triphosphate diphosphatase |
* | * | ÷ | NZ_CP009273 | 4344739 | 4344753 | 15 | 2 [1] | [1] 3 | lysS/dtpC | lysine‑‑tRNA ligase/dipeptide/tripeptide permease DtpC |
* | * | ÷ | NZ_CP009273 | 4350098 | 4350150 | 53 | 2 [0] | [1] 2 | cadB/cadC | cadaverine/lysine antiporter/lysine decarboxylation/transport transcriptional activator CadC |
* | * | ÷ | NZ_CP009273 | 4427424 | 4427469 | 46 | 2 [0] | [1] 2 | cysQ/BW25113_RS21900 | 3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 4466694 | 4466833 | 140 | 2 [0] | [0] 2 | BW25113_RS22080 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 4478228 | 4478277 | 50 | 2 [1] | [1] 2 | lptG/yjgR | LPS export ABC transporter permease LptG/DUF853 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 4531520 | 4531539 | 20 | 2 [0] | [0] 2 | fimB/fimE | type 1 fimbria switch DNA invertase FimB/type 1 fimbria switch DNA invertase FimE |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 286345 = | NA (NA) | 12 (0.980) | 7/166 | 0.5 | 100% | intergenic (+2/+15) | BW25113_RS23270/BW25113_RS01405 | YfjI family protein/IS1‑like element IS1B family transposase |
? | NZ_CP009273 | 3512441 = | 0 (0.000) | intergenic (‑18/+383) | aroK/hofQ | shikimate kinase AroK/DNA uptake porin HofQ | |||||
* | ? | NZ_CP009273 | 360104 = | NA (NA) | 32 (2.600) | 21/166 | 0.0 | 57.1% | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
? | NZ_CP009273 | = 360286 | 24 (1.950) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
* | ? | NZ_CP009273 | = 1391494 | NA (NA) | 4 (0.330) | 4/164 | 0.9 | 100% | intergenic (+145/‑128) | BW25113_RS06980/ynaJ | IS5‑like element IS5 family transposase/DUF2534 family protein |
? | NZ_CP009273 | 1972747 = | 0 (0.000) | intergenic (‑293/‑487) | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC | |||||
* | ? | NZ_CP009273 | = 1391495 | NA (NA) | 12 (0.980) | 8/166 | 0.4 | 92.3% | intergenic (+146/‑127) | BW25113_RS06980/ynaJ | IS5‑like element IS5 family transposase/DUF2534 family protein |
? | NZ_CP009273 | 1903069 = | 1 (0.080) | intergenic (‑46/‑113) | mgrB/yobH | PhoP/PhoQ regulator MgrB/YobH family protein | |||||
* | ? | NZ_CP009273 | = 1903072 | 2 (0.160) | 7 (0.570) | 7/166 | 0.5 | 77.8% | intergenic (‑49/‑110) | mgrB/yobH | PhoP/PhoQ regulator MgrB/YobH family protein |
? | NZ_CP009273 | = 2096424 | NA (NA) | intergenic (‑68/+3) | BW25113_RS10605/wbbL | IS5‑like element IS5 family transposase/N‑acetylglucosaminyl‑diphospho‑decaprenol L‑rhamnosyltransferase WbbL | |||||
* | ? | NZ_CP009273 | = 1972751 | 1 (0.080) | 22 (1.790) | 15/166 | 0.1 | 95.7% | intergenic (‑297/‑483) | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
? | NZ_CP009273 | = 2283592 | NA (NA) | intergenic (‑68/‑387) | BW25113_RS11435/narP | IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP | |||||
* | ? | NZ_CP009273 | = 3512449 | 0 (0.000) | 10 (0.810) | 10/166 | 0.3 | 100% | intergenic (‑26/+375) | aroK/hofQ | shikimate kinase AroK/DNA uptake porin HofQ |
? | NZ_CP009273 | 3576788 = | NA (NA) | coding (391/417 nt) | BW25113_RS17825 | YrhA family protein |