breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation annotation gene description
RA 49,765 C→T intergenic (+134/‑58) kefC → / → folA glutathione‑regulated potassium‑efflux system protein KefC/type 3 dihydrofolate reductase
RA 49,903 T→G D27E (GAT→GAG)  folA → type 3 dihydrofolate reductase
MC JC 2,399,465 Δ7 bp coding (650‑656/939 nt) lrhA ← transcriptional regulator LrhA
RA 3,754,231 G→T R127S (CGC→AGC)  selA ← L‑seryl‑tRNA(Sec) selenium transferase

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 1867 1877 11 2 [0] [0] 2 thrA bifunctional aspartate kinase/homoserine dehydrogenase I
* * ÷ NZ_CP009273 35817 35835 19 2 [0] [1] 2 caiD crotonobetainyl‑CoA hydratase
* * ÷ NZ_CP009273 80535 80631 97 2 [1] [1] 3 leuL/leuO leu operon leader peptide/transcriptional regulator LeuO
* * ÷ NZ_CP009273 122713 122749 37 2 [1] [1] 3 aceF pyruvate dehydrogenase complex dihydrolipoyllysine‑residue acetyltransferase
* * ÷ NZ_CP009273 125770 125817 48 3 [1] [1] 2 lpdA dihydrolipoyl dehydrogenase
* * ÷ NZ_CP009273 152796 152810 15 2 [1] [1] 3 yadN fimbrial protein
* * ÷ NZ_CP009273 168039 168092 54 2 [1] [1] 2 fhuB Fe(3+)‑hydroxamate ABC transporter permease FhuB
* * ÷ NZ_CP009273 195135 195150 16 5 [1] [1] 2 bamA outer membrane protein assembly factor BamA
* * ÷ NZ_CP009273 235223 235272 50 3 [1] [1] 2 [BW25113_RS01095]–[BW25113_RS01100] [BW25113_RS01095],[BW25113_RS01100]
* * ÷ NZ_CP009273 356976 357574 599 2 [1] [1] 2 [lacA] [lacA]
* * ÷ NZ_CP009273 396622 396646 25 2 [1] [1] 2 BW25113_RS25915 hypothetical protein
* * ÷ NZ_CP009273 406088 406102 15 2 [1] [1] 3 mak fructokinase
* * ÷ NZ_CP009273 420361 420389 29 2 [1] [1] 2 [acpH] [acpH]
* * ÷ NZ_CP009273 505269 505284 16 3 [1] [1] 3 copA copper‑exporting P‑type ATPase CopA
* * ÷ NZ_CP009273 507075 507134 60 2 [1] [1] 3 [glsA] [glsA]
* * ÷ NZ_CP009273 516101 516112 12 2 [0] [1] 2 ybbP ABC transporter permease
* * ÷ NZ_CP009273 532461 532480 20 3 [0] [1] 4 glxR 2‑hydroxy‑3‑oxopropionate reductase
* * ÷ NZ_CP009273 541876 541886 11 2 [0] [0] 2 allD/fdrA ureidoglycolate dehydrogenase/acyl‑CoA synthetase FdrA
* * ÷ NZ_CP009273 542282 542382 101 2 [1] [1] 2 fdrA acyl‑CoA synthetase FdrA
* * ÷ NZ_CP009273 568269 568290 22 2 [1] [1] 3 ybcN DNA base‑flipping protein YbcN
* * ÷ NZ_CP009273 578612 578741 130 5 [1] [1] 3 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 578873 579043 171 3 [1] [1] 2 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 579904 579932 29 4 [0] [1] 3 appY/ompT DNA‑binding transcriptional activator AppY/omptin family outer membrane protease OmpT
* * ÷ NZ_CP009273 587838 587850 13 2 [1] [1] 4 nrfB cyclic di‑3',5'‑guanylate‑activated glycosyltransferase NrfB
* * ÷ NZ_CP009273 610407 610417 11 2 [0] [0] 2 entF enterobactin non‑ribosomal peptide synthetase EntF
* * ÷ NZ_CP009273 627490 627508 19 2 [1] [1] 2 cstA/ybdD pyruvate/proton symporter CstA/YbdD/YjiX family protein
* * ÷ NZ_CP009273 632966 632976 11 3 [0] [0] 4 ybdO LysR family transcriptional regulator
* * ÷ NZ_CP009273 643127 643268 142 2 [1] [1] 3 citX citrate lyase holo‑[acyl‑carrier protein] synthase
* * ÷ NZ_CP009273 647449 647498 50 2 [1] [1] 2 citC/dpiB [citrate (pro‑3S)‑lyase] ligase/sensor histidine kinase DpiB
* * ÷ NZ_CP009273 649986 649987 2 2 [0] [0] 2 dpiA two‑component response regulator DpiA
* * ÷ NZ_CP009273 651710 651734 25 2 [1] [1] 3 dcuC/pagP anaerobic C4‑dicarboxylate transporter DcuC/lipid IV(A) palmitoyltransferase PagP
* * ÷ NZ_CP009273 665572 665646 75 2 [1] [1] 2 nadD nicotinate‑nucleotide adenylyltransferase
* * ÷ NZ_CP009273 674836 674864 29 2 [0] [1] 2 [ybeT] [ybeT]
* * ÷ NZ_CP009273 716369 716455 87 2 [1] [0] 2 BW25113_RS26090/kdpE leader peptide SpeFL/two‑component system response regulator KdpE
* * ÷ NZ_CP009273 725084 725107 24 2 [1] [0] 2 rhsC rhs element protein RhsC
* * ÷ NZ_CP009273 743814 743841 28 2 [1] [1] 3 ybgO fimbrial protein
* * ÷ NZ_CP009273 747428 747508 81 3 [1] [1] 2 ybgQ fimbrial biogenesis outer membrane usher protein
* * ÷ NZ_CP009273 748381 748417 37 2 [1] [1] 4 ybgD/gltA fimbrial protein/citrate synthase
* * ÷ NZ_CP009273 755850 755860 11 2 [0] [0] 2 sucA 2‑oxoglutarate dehydrogenase E1 component
* * ÷ NZ_CP009273 805956 805973 18 2 [1] [1] 2 bioF 8‑amino‑7‑oxononanoate synthase
* * ÷ NZ_CP009273 808787 808864 78 3 [1] [1] 2 bioD/uvrB dethiobiotin synthase/excinuclease ABC subunit UvrB
* * ÷ NZ_CP009273 809196 809206 11 3 [1] [0] 2 uvrB excinuclease ABC subunit UvrB
* * ÷ NZ_CP009273 816132 816221 90 2 [0] [1] 2 ybhL/ybhM Bax inhibitor‑1/YccA family protein/Bax inhibitor‑1/YccA family protein
* * ÷ NZ_CP009273 818285 818290 6 2 [1] [0] 2 clsB cardiolipin synthase ClsB
* * ÷ NZ_CP009273 819686 819813 128 2 [1] [1] 2 ybhP endonuclease/exonuclease/phosphatase family protein
* * ÷ NZ_CP009273 831164 831234 71 2 [0] [1] 2 ybiB DNA‑binding protein YbiB
* * ÷ NZ_CP009273 836612 836642 31 2 [1] [1] 2 fiu catecholate siderophore receptor Fiu
* * ÷ NZ_CP009273 837622 837667 46 2 [1] [1] 2 mcbA/rlmF DUF1471 family periplasmic protein McbA/23S rRNA (adenine(1618)‑N(6))‑methyltransferase RlmF
* * ÷ NZ_CP009273 848754 848795 42 2 [1] [1] 2 mntR manganese‑binding transcriptional regulator MntR
* * ÷ NZ_CP009273 854482 854522 41 3 [1] [1] 2 [ybiU] [ybiU]
* * ÷ NZ_CP009273 858262 858275 14 2 [1] [0] 2 ybiY glycyl‑radical enzyme activating protein
* * ÷ NZ_CP009273 862427 862576 150 2 [1] [1] 2 iaaA beta‑aspartyl‑peptidase
* * ÷ NZ_CP009273 877240 877281 42 2 [1] [1] 2 dacC serine‑type D‑Ala‑D‑Ala carboxypeptidase
* * ÷ NZ_CP009273 887657 887699 43 2 [1] [1] 2 rimK 30S ribosomal protein S6‑‑L‑glutamate ligase
* * ÷ NZ_CP009273 893230 893267 38 2 [1] [1] 2 potI putrescine ABC transporter permease PotI
* * ÷ NZ_CP009273 893528 893545 18 2 [1] [0] 2 ybjO YbjO family protein
* * ÷ NZ_CP009273 896159 896210 52 2 [1] [0] 2 artJ/artM ABC transporter substrate‑binding protein ArtJ/arginine ABC transporter permease ArtM
* * ÷ NZ_CP009273 903008 903070 63 2 [0] [1] 2 ybjT SDR family oxidoreductase
* * ÷ NZ_CP009273 908256 908277 22 5 [1] [1] 2 hcp hydroxylamine reductase
* * ÷ NZ_CP009273 930195 930256 62 2 [1] [1] 4 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 930676 930691 16 4 [1] [1] 3 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 932681 932748 68 2 [1] [1] 2 ftsK/lolA DNA translocase FtsK/outer membrane lipoprotein chaperone LolA
* * ÷ NZ_CP009273 943412 943444 33 2 [1] [0] 2 ycaM amino acid permease
* * ÷ NZ_CP009273 944050 944075 26 2 [1] [1] 2 ycaM amino acid permease
* * ÷ NZ_CP009273 949209 949267 59 2 [1] [1] 2 focA formate transporter FocA
* * ÷ NZ_CP009273 972921 973016 96 2 [1] [1] 2 mukB chromosome partition protein MukB
* * ÷ NZ_CP009273 982718 983008 291 3 [0] [1] 2 ompF/asnS porin OmpF/asparagine‑‑tRNA ligase
* * ÷ NZ_CP009273 990251 990293 43 2 [1] [1] 2 [ssuC] [ssuC]
* * ÷ NZ_CP009273 1001103 1001152 50 2 [1] [1] 2 pyrD quinone‑dependent dihydroorotate dehydrogenase
* * ÷ NZ_CP009273 1016634 1016669 36 2 [1] [1] 2 sxy CRP‑S regulon transcriptional coactivator Sxy
* * ÷ NZ_CP009273 1020395 1020421 27 2 [1] [1] 2 helD DNA helicase IV
* * ÷ NZ_CP009273 1025894 1025952 59 2 [1] [1] 2 tusE sulfurtransferase TusE
* * ÷ NZ_CP009273 1028263 1028382 120 2 [1] [1] 2 hyaA hydrogenase 1 small subunit
* * ÷ NZ_CP009273 1030569 1030582 14 2 [0] [1] 3 hyaC Ni/Fe‑hydrogenase b‑type cytochrome subunit
* * ÷ NZ_CP009273 1033292 1033353 62 2 [1] [1] 2 appC cytochrome bd‑II oxidase subunit 1
* * ÷ NZ_CP009273 1045188 1045222 35 2 [1] [0] 2 [gfcA] [gfcA]
* * ÷ NZ_CP009273 1046847 1046855 9 3 [0] [0] 2 cspH/cspG cold shock‑like protein CspH/cold shock protein CspG
* * ÷ NZ_CP009273 1047266 1047298 33 2 [1] [1] 2 ymcF cold‑shock protein
* * ÷ NZ_CP009273 1051144 1051213 70 2 [1] [1] 3 torS TMAO reductase system sensor histidine kinase/response regulator TorS
* * ÷ NZ_CP009273 1052524 1052560 37 2 [1] [1] 2 torT TMAO reductase system periplasmic protein TorT
* * ÷ NZ_CP009273 1053979 1053984 6 2 [1] [0] 2 torC pentaheme c‑type cytochrome TorC
* * ÷ NZ_CP009273 1054161 1054166 6 2 [1] [0] 2 torC pentaheme c‑type cytochrome TorC
* * ÷ NZ_CP009273 1057315 1057350 36 4 [1] [1] 2 torD molecular chaperone TorD
* * ÷ NZ_CP009273 1059487 1059497 11 2 [0] [0] 2 [yccE] [yccE]
* * ÷ NZ_CP009273 1070844 1070927 84 3 [1] [1] 2 putA trifunctional transcriptional regulator/proline dehydrogenase/L‑glutamate gamma‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1091213 1091274 62 2 [1] [1] 3 BW25113_RS05355 ACP S‑malonyltransferase
* * ÷ NZ_CP009273 1091626 1091651 26 2 [1] [1] 2 BW25113_RS05360 hypothetical protein
* * ÷ NZ_CP009273 1097103 1097118 16 2 [0] [0] 2 csgG curli production assembly/transport protein CsgG
* * ÷ NZ_CP009273 1098805 1098879 75 2 [1] [1] 2 csgD/csgB biofilm master transcriptional regulator CsgD/curli minor subunit CsgB
* * ÷ NZ_CP009273 1112208 1112218 11 2 [0] [0] 3 lpxL/trhO kdo(2)‑lipid IV(A) lauroyltransferase/rhodanese‑related sulfurtransferase
* * ÷ NZ_CP009273 1113287 1113307 21 2 [1] [1] 2 trhO rhodanese‑related sulfurtransferase
* * ÷ NZ_CP009273 1116523 1116564 42 2 [1] [1] 2 bssS/dinI biofilm formation regulator BssS/DNA damage‑inducible protein I
* * ÷ NZ_CP009273 1118859 1118893 35 2 [1] [1] 2 [grxB] [grxB]
* * ÷ NZ_CP009273 1124495 1124541 47 2 [1] [1] 3 murJ murein biosynthesis integral membrane protein MurJ
* * ÷ NZ_CP009273 1125010 1125033 24 2 [1] [0] 2 flgN flagella biosynthesis chaperone FlgN
* * ÷ NZ_CP009273 1133761 1133809 49 3 [0] [1] 2 [flgJ] [flgJ]
* * ÷ NZ_CP009273 1134756 1134776 21 2 [1] [1] 2 flgK flagellar hook‑associated protein FlgK
* * ÷ NZ_CP009273 1137023 1137044 22 2 [1] [0] 2 rne ribonuclease E
* * ÷ NZ_CP009273 1137361 1137368 8 2 [0] [1] 2 rne ribonuclease E
* * ÷ NZ_CP009273 1137863 1137950 88 2 [1] [1] 2 rne ribonuclease E
* * ÷ NZ_CP009273 1139787 1139873 87 2 [1] [1] 2 [rne] [rne]
* * ÷ NZ_CP009273 1143102 1143153 52 2 [1] [1] 3 plsX phosphate acyltransferase PlsX
* * ÷ NZ_CP009273 1144769 1144777 9 2 [1] [0] 2 fabH beta‑ketoacyl‑ACP synthase III
* * ÷ NZ_CP009273 1144868 1144903 36 2 [0] [1] 2 fabH beta‑ketoacyl‑ACP synthase III
* * ÷ NZ_CP009273 1161468 1161515 48 2 [1] [1] 2 ycfP/ndh alpha/beta hydrolase YcfP/NADH‑quinone dehydrogenase
* * ÷ NZ_CP009273 1164292 1164310 19 2 [1] [1] 3 comR/bhsA TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA
* * ÷ NZ_CP009273 1164381 1164421 41 3 [1] [1] 2 comR/bhsA TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA
* * ÷ NZ_CP009273 1167102 1167133 32 4 [1] [1] 2 mfd transcription‑repair coupling factor
* * ÷ NZ_CP009273 1167684 1167720 37 2 [1] [1] 2 mfd transcription‑repair coupling factor
* * ÷ NZ_CP009273 1170397 1170479 83 3 [1] [1] 2 ycfT acyltransferase family protein
* * ÷ NZ_CP009273 1172202 1172291 90 2 [0] [1] 2 lolD lipoprotein‑releasing ABC transporter ATP‑binding protein LolD
* * ÷ NZ_CP009273 1172340 1172455 116 3 [1] [1] 2 lolD lipoprotein‑releasing ABC transporter ATP‑binding protein LolD
* * ÷ NZ_CP009273 1174405 1174429 25 2 [1] [1] 2 nagK N‑acetylglucosamine kinase
* * ÷ NZ_CP009273 1177243 1177268 26 2 [1] [0] 2 potD spermidine/putrescine ABC transporter substrate‑binding protein PotD
* * ÷ NZ_CP009273 1181043 1181048 6 2 [0] [1] 2 potA spermidine/putrescine ABC transporter ATP‑binding protein PotA
* * ÷ NZ_CP009273 1182571 1182684 114 2 [1] [1] 2 [roxA] [roxA]
* * ÷ NZ_CP009273 1185935 1185962 28 2 [1] [0] 2 phoP/purB two‑component system response regulator PhoP/adenylosuccinate lyase
* * ÷ NZ_CP009273 1186476 1186494 19 3 [0] [1] 2 purB adenylosuccinate lyase
* * ÷ NZ_CP009273 1191990 1192017 28 2 [0] [1] 2 icd/ymfD NADP‑dependent isocitrate dehydrogenase/class I SAM‑dependent methyltransferase
* * ÷ NZ_CP009273 1193159 1193242 84 2 [0] [1] 2 BW25113_RS05920 hypothetical protein
* * ÷ NZ_CP009273 1194004 1194033 30 2 [1] [1] 3 BW25113_RS05920/lit hypothetical protein/cell death peptidase Lit
* * ÷ NZ_CP009273 1194469 1194487 19 2 [1] [1] 3 lit cell death peptidase Lit
* * ÷ NZ_CP009273 1198438 1198472 35 2 [1] [1] 3 ymfK/ymfT LexA family transcriptional repressor/YdaS family helix‑turn‑helix protein
* * ÷ NZ_CP009273 1205036 1205074 39 2 [1] [0] 6 BW25113_RS06005 phage tail protein
* * ÷ NZ_CP009273 1206653 1206663 11 2 [1] [0] 3 mcrA/BW25113_RS23640 5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase
* * ÷ NZ_CP009273 1207526 1207585 60 2 [1] [1] 2 iraM/BW25113_RS25985 anti‑adapter protein IraM/protein YmgK
* * ÷ NZ_CP009273 1211096 1211191 96 2 [1] [1] 3 bluF/ycgZ blue light‑responsive regulator BluF/regulatory protein YcgZ
* * ÷ NZ_CP009273 1211319 1211356 38 3 [1] [1] 2 ycgZ regulatory protein YcgZ
* * ÷ NZ_CP009273 1216272 1216315 44 3 [1] [1] 2 BW25113_RS25990 autotransporter outer membrane beta‑barrel domain‑containing protein
* * ÷ NZ_CP009273 1218443 1218466 24 3 [1] [0] 2 [ymgG]–[BW25113_RS06100] [ymgG],[BW25113_RS06100]
* * ÷ NZ_CP009273 1220640 1220674 35 2 [1] [1] 2 minD septum site‑determining protein MinD
* * ÷ NZ_CP009273 1224608 1224661 54 2 [1] [1] 2 ycgN YcgN family cysteine cluster protein
* * ÷ NZ_CP009273 1225100 1225123 24 2 [1] [1] 2 hlyE hemolysin HlyE
* * ÷ NZ_CP009273 1242742 1242799 58 2 [1] [0] 2 treA alpha,alpha‑trehalase
* * ÷ NZ_CP009273 1249967 1250012 46 2 [1] [1] 3 ycgV autotransporter outer membrane beta‑barrel domain‑containing protein
* * ÷ NZ_CP009273 1253829 1253854 26 2 [0] [1] 3 pth aminoacyl‑tRNA hydrolase
* * ÷ NZ_CP009273 1263084 1263156 73 4 [1] [1] 2 sirB1 invasion regulator SirB1
* * ÷ NZ_CP009273 1279286 1279310 25 3 [1] [1] 2 narH nitrate reductase subunit beta
* * ÷ NZ_CP009273 1283655 1283671 17 3 [1] [0] 2 purU formyltetrahydrofolate deformylase
* * ÷ NZ_CP009273 1284908 1284951 44 2 [0] [0] 2 rssA patatin‑like phospholipase RssA
* * ÷ NZ_CP009273 1286762 1286858 97 3 [1] [1] 2 rssB/galU two‑component system response regulator RssB/UTP‑‑glucose‑1‑phosphate uridylyltransferase GalU
* * ÷ NZ_CP009273 1288008 1288115 108 2 [0] [1] 2 hns DNA‑binding transcriptional regulator H‑NS
* * ÷ NZ_CP009273 1291847 1291852 6 2 [0] [1] 3 adhE bifunctional acetaldehyde‑CoA/alcohol dehydrogenase
* * ÷ NZ_CP009273 1294018 1294049 32 2 [1] [0] 2 [ychE] [ychE]
* * ÷ NZ_CP009273 1294519 1294634 116 2 [1] [1] 2 ychE NAAT family transporter YchE
* * ÷ NZ_CP009273 1304125 1304228 104 2 [0] [0] 2 kch voltage‑gated potassium channel protein
* * ÷ NZ_CP009273 1314872 1314965 94 2 [1] [0] 2 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
* * ÷ NZ_CP009273 1318576 1318586 11 2 [1] [0] 2 yciO L‑threonylcarbamoyladenylate synthase
* * ÷ NZ_CP009273 1319046 1319056 11 2 [1] [0] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1319674 1319680 7 2 [0] [1] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1320900 1320950 51 2 [1] [0] 5 yciQ/rluB DUF2207 domain‑containing protein/23S rRNA pseudouridine(2605) synthase RluB
* * ÷ NZ_CP009273 1322784 1322819 36 2 [1] [1] 2 yciK YciK family oxidoreductase
* * ÷ NZ_CP009273 1326473 1326514 42 2 [0] [1] 2 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1332557 1332596 40 2 [1] [0] 2 acnA aconitate hydratase AcnA
* * ÷ NZ_CP009273 1333413 1333432 20 2 [0] [1] 2 [ribA] [ribA]
* * ÷ NZ_CP009273 1336959 1337053 95 2 [1] [0] 2 yciH stress response translation initiation inhibitor YciH
* * ÷ NZ_CP009273 1338719 1338761 43 3 [1] [1] 2 BW25113_RS06720 hypothetical protein
* * ÷ NZ_CP009273 1340373 1340411 39 2 [1] [1] 2 pdeR cyclic di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1345861 1345951 91 2 [1] [1] 2 ycjD DUF559 domain‑containing protein
* * ÷ NZ_CP009273 1347563 1347618 56 2 [1] [1] 3 sapD peptide ABC transporter ATP‑binding protein SapD
* * ÷ NZ_CP009273 1349527 1349629 103 2 [1] [1] 3 sapB putrescine ABC transporter permease SapB
* * ÷ NZ_CP009273 1353783 1353793 11 2 [0] [1] 2 puuA glutamate‑putrescine ligase
* * ÷ NZ_CP009273 1354126 1354154 29 2 [1] [0] 2 puuA glutamate‑putrescine ligase
* * ÷ NZ_CP009273 1354193 1354210 18 2 [0] [1] 2 puuA glutamate‑putrescine ligase
* * ÷ NZ_CP009273 1356146 1356159 14 3 [1] [0] 4 puuD/puuR gamma‑glutamyl‑gamma‑aminobutyrate hydrolase/HTH‑type transcriptional regulator PuuR
* * ÷ NZ_CP009273 1357380 1357393 14 2 [1] [1] 2 puuC aldehyde dehydrogenase PuuC
* * ÷ NZ_CP009273 1357908 1357997 90 2 [1] [1] 3 puuC aldehyde dehydrogenase PuuC
* * ÷ NZ_CP009273 1360502 1360509 8 2 [0] [1] 2 puuE 4‑aminobutyrate transaminase
* * ÷ NZ_CP009273 1364971 1365045 75 2 [1] [1] 2 ycjM glucosylglycerate phosphorylase
* * ÷ NZ_CP009273 1370538 1370577 40 2 [0] [1] 3 ycjR sugar phosphate isomerase/epimerase
* * ÷ NZ_CP009273 1370629 1370713 85 3 [1] [1] 3 ycjR sugar phosphate isomerase/epimerase
* * ÷ NZ_CP009273 1376217 1376232 16 2 [0] [1] 3 ompG monomeric porin OmpG
* * ÷ NZ_CP009273 1377472 1377484 13 2 [1] [1] 3 ycjW LacI family DNA‑binding transcriptional regulator
* * ÷ NZ_CP009273 1380717 1380781 65 2 [1] [1] 2 ycjF YcjF family protein
* * ÷ NZ_CP009273 1395642 1395652 11 2 [1] [1] 2 abgT p‑aminobenzoyl‑glutamate transporter
* * ÷ NZ_CP009273 1408261 1408275 15 2 [1] [1] 2 recT recombination protein RecT
* * ÷ NZ_CP009273 1423636 1423655 20 3 [1] [0] 2 stfR prophage tail fiber N‑terminal domain‑containing protein
* * ÷ NZ_CP009273 1424037 1424090 54 2 [1] [1] 2 stfR prophage tail fiber N‑terminal domain‑containing protein
* * ÷ NZ_CP009273 1430014 1430033 20 2 [1] [0] 2 [ompN] [ompN]
* * ÷ NZ_CP009273 1432217 1432300 84 2 [1] [1] 3 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1432609 1432635 27 2 [1] [1] 2 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1433055 1433097 43 2 [1] [1] 2 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1433162 1433219 58 2 [1] [1] 2 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1433761 1433803 43 2 [0] [1] 3 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1435258 1435335 78 2 [1] [1] 2 [ydbJ] [ydbJ]
* * ÷ NZ_CP009273 1436861 1436924 64 2 [1] [1] 2 ldhA D‑lactate dehydrogenase
* * ÷ NZ_CP009273 1437684 1437769 86 2 [0] [0] 2 ydbH YdbH family protein
* * ÷ NZ_CP009273 1439865 1439911 47 2 [1] [1] 2 ydbH YdbH family protein
* * ÷ NZ_CP009273 1443051 1443066 16 3 [1] [0] 3 feaB phenylacetaldehyde dehydrogenase
* * ÷ NZ_CP009273 1448403 1448436 34 2 [1] [1] 2 paaA 1,2‑phenylacetyl‑CoA epoxidase subunit A
* * ÷ NZ_CP009273 1451223 1451291 69 2 [1] [0] 3 paaK phenylacetate‑CoA oxygenase/reductase subunit PaaK
* * ÷ NZ_CP009273 1455035 1455061 27 2 [1] [0] 2 paaI hydroxyphenylacetyl‑CoA thioesterase PaaI
* * ÷ NZ_CP009273 1458575 1458658 84 3 [1] [1] 4 paaX phenylacetic acid degradation operon negative regulatory protein PaaX
* * ÷ NZ_CP009273 1459420 1459478 59 2 [1] [1] 2 [BW25113_RS25580] [BW25113_RS25580]
* * ÷ NZ_CP009273 1466266 1466278 13 2 [1] [0] 2 BW25113_RS07370 autotransporter domain‑containing protein
* * ÷ NZ_CP009273 1485767 1485806 40 2 [0] [1] 2 cybB/BW25113_RS07445 cytochrome b561/periplasmic protein
* * ÷ NZ_CP009273 1489409 1489432 24 3 [1] [1] 2 ydcI/ydcJ LysR substrate‑binding domain‑containing protein/VOC family protein
* * ÷ NZ_CP009273 1489655 1489668 14 2 [1] [1] 2 ydcJ VOC family protein
* * ÷ NZ_CP009273 1492378 1492456 79 2 [1] [1] 2 opgD glucan biosynthesis protein OpgD
* * ÷ NZ_CP009273 1492652 1492657 6 2 [0] [1] 2 opgD glucan biosynthesis protein OpgD
* * ÷ NZ_CP009273 1496445 1496499 55 3 [1] [1] 3 tehB/ydcL tellurite resistance methyltransferase TehB/DUF3313 domain‑containing protein
* * ÷ NZ_CP009273 1506877 1506891 15 2 [1] [1] 2 ydcS ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 1509118 1509196 79 2 [1] [1] 3 ydcV ABC transporter permease
* * ÷ NZ_CP009273 1510421 1510433 13 4 [1] [1] 2 patD aminobutyraldehyde dehydrogenase
* * ÷ NZ_CP009273 1516015 1516039 25 2 [0] [1] 2 yncD TonB‑dependent receptor
* * ÷ NZ_CP009273 1518722 1518762 41 2 [0] [1] 2 [ansP] [ansP]
* * ÷ NZ_CP009273 1524235 1524366 132 2 [1] [1] 2 BW25113_RS07645/BW25113_RS26145 RHS repeat protein/hypothetical protein
* * ÷ NZ_CP009273 1528517 1528660 144 2 [1] [1] 2 nhoA N‑hydroxyarylamine O‑acetyltransferase
* * ÷ NZ_CP009273 1533752 1533787 36 2 [1] [1] 4 narZ nitrate reductase Z subunit alpha
* * ÷ NZ_CP009273 1539081 1539217 137 2 [1] [1] 2 BW25113_RS07710 leucine‑rich repeat domain‑containing protein
* * ÷ NZ_CP009273 1543000 1543038 39 2 [0] [1] 2 fdnG formate dehydrogenase‑N subunit alpha
* * ÷ NZ_CP009273 1553189 1553224 36 2 [1] [1] 2 ddpD ABC transporter ATP‑binding protein
* * ÷ NZ_CP009273 1557931 1558112 182 2 [0] [1] 2 dosP oxygen‑sensing cyclic‑di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1558914 1558945 32 3 [0] [1] 2 dosP oxygen‑sensing cyclic‑di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1560796 1560822 27 3 [0] [1] 2 dosC diguanylate cyclase DosC
* * ÷ NZ_CP009273 1573630 1573696 67 3 [1] [0] 2 yddA/BW25113_RS25610 ABC transporter ATP‑binding protein/permease/protein YneP
* * ÷ NZ_CP009273 1576831 1576871 41 2 [1] [1] 2 ydeN/ydeO sulfatase/acid stress response transcriptional regulator YdeO
* * ÷ NZ_CP009273 1586214 1586285 72 4 [1] [1] 2 hipA type II toxin‑antitoxin system serine/threonine protein kinase toxin HipA
* * ÷ NZ_CP009273 1592595 1592673 79 2 [1] [1] 2 BW25113_RS07915/lsrK ECSE_1600 family autotransporter/autoinducer‑2 kinase
* * ÷ NZ_CP009273 1597394 1597434 41 2 [0] [1] 2 lsrC autoinducer 2 ABC transporter permease LsrC
* * ÷ NZ_CP009273 1600956 1601004 49 2 [1] [1] 2 lsrF 3‑hydroxy‑5‑phosphonooxypentane‑2,4‑dione thiolase
* * ÷ NZ_CP009273 1605592 1605669 78 2 [0] [1] 2 dgcF GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1608765 1608821 57 2 [0] [1] 2 sad succinate‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1609972 1609982 11 4 [1] [0] 2 yneJ/yneK LysR family transcriptional regulator/putative protein YneK
* * ÷ NZ_CP009273 1615977 1616005 29 2 [1] [0] 2 ydeE efflux MFS transporter YdeE
* * ÷ NZ_CP009273 1618631 1618649 19 2 [1] [0] 2 ydeI YdeI family stress tolerance OB fold protein
* * ÷ NZ_CP009273 1618881 1619015 135 2 [1] [1] 2 ydeI/ydeJ YdeI family stress tolerance OB fold protein/2‑oxo‑tetronate isomerase
* * ÷ NZ_CP009273 1620625 1620653 29 3 [1] [1] 2 dcp peptidyl‑dipeptidase Dcp
* * ÷ NZ_CP009273 1621024 1621165 142 2 [1] [1] 2 dcp peptidyl‑dipeptidase Dcp
* * ÷ NZ_CP009273 1624433 1624506 74 2 [1] [1] 2 ydfI mannitol dehydrogenase family protein
* * ÷ NZ_CP009273 1624672 1624696 25 2 [1] [1] 2 ydfI mannitol dehydrogenase family protein
* * ÷ NZ_CP009273 1625128 1625179 52 2 [1] [1] 2 [ydfI] [ydfI]
* * ÷ NZ_CP009273 1632398 1632462 65 2 [1] [0] 2 [BW25113_RS25620] [BW25113_RS25620]
* * ÷ NZ_CP009273 1636681 1636717 37 2 [1] [1] 3 BW25113_RS25625/ydfT hypothetical protein/antitermination protein
* * ÷ NZ_CP009273 1637485 1637509 25 2 [1] [1] 2 [ydfT] [ydfT]
* * ÷ NZ_CP009273 1640657 1640666 10 2 [1] [1] 2 [flxA] [flxA]
* * ÷ NZ_CP009273 1643764 1643803 40 2 [1] [1] 2 BW25113_RS08235/dicB hypothetical protein/cell division inhibition protein DicB
* * ÷ NZ_CP009273 1646927 1646952 26 2 [1] [0] 2 BW25113_RS25635 tyrosine‑type recombinase/integrase
* * ÷ NZ_CP009273 1651221 1651306 86 2 [1] [1] 2 ynfC YnfC family lipoprotein
* * ÷ NZ_CP009273 1652192 1652219 28 2 [1] [1] 2 ynfD/ynfE DUF1161 domain‑containing protein/dimethyl sulfoxide reductase subunit A
* * ÷ NZ_CP009273 1655883 1655940 58 2 [1] [1] 2 ynfF dimethyl sulfoxide reductase subunit A
* * ÷ NZ_CP009273 1656588 1656600 13 2 [1] [0] 2 ynfF dimethyl sulfoxide reductase subunit A
* * ÷ NZ_CP009273 1663752 1663823 72 2 [1] [0] 2 ynfL LysR family transcriptional regulator
* * ÷ NZ_CP009273 1671615 1671639 25 2 [1] [1] 2 pntA Re/Si‑specific NAD(P)(+) transhydrogenase subunit alpha
* * ÷ NZ_CP009273 1674701 1674715 15 4 [0] [1] 2 ydgI amino acid permease
* * ÷ NZ_CP009273 1680194 1680204 11 2 [1] [1] 2 fumC class II fumarate hydratase
* * ÷ NZ_CP009273 1683891 1683929 39 2 [1] [1] 2 manA mannose‑6‑phosphate isomerase
* * ÷ NZ_CP009273 1684769 1684790 22 3 [0] [1] 3 ydgA YdgA family protein
* * ÷ NZ_CP009273 1696310 1696465 156 2 [1] [1] 2 [malY] [malY]
* * ÷ NZ_CP009273 1696590 1696705 116 2 [1] [1] 2 add adenosine deaminase
* * ÷ NZ_CP009273 1696943 1697055 113 2 [1] [1] 2 add adenosine deaminase
* * ÷ NZ_CP009273 1699316 1699327 12 3 [1] [1] 2 ydgT transcription modulator YdgT
* * ÷ NZ_CP009273 1700629 1700674 46 2 [1] [1] 5 rsxB electron transport complex subunit RsxB
* * ÷ NZ_CP009273 1704050 1704077 28 2 [1] [1] 2 rsxD electron transport complex subunit RsxD
* * ÷ NZ_CP009273 1706859 1706878 20 2 [1] [1] 3 nth/dtpA endonuclease III/dipeptide/tripeptide permease DtpA
* * ÷ NZ_CP009273 1711172 1711238 67 5 [1] [1] 2 tyrS tyrosine‑‑tRNA ligase
* * ÷ NZ_CP009273 1713081 1713126 46 2 [1] [1] 2 anmK anhydro‑N‑acetylmuramic acid kinase
* * ÷ NZ_CP009273 1713245 1713260 16 2 [0] [1] 2 anmK anhydro‑N‑acetylmuramic acid kinase
* * ÷ NZ_CP009273 1715241 1715260 20 2 [1] [1] 2 slyA/ydhI transcriptional regulator SlyA/DUF1656 domain‑containing protein
* * ÷ NZ_CP009273 1715988 1716011 24 2 [0] [1] 2 ydhJ HlyD family secretion protein
* * ÷ NZ_CP009273 1718603 1718607 5 2 [0] [0] 2 sodC superoxide dismutase [Cu‑Zn] SodC
* * ÷ NZ_CP009273 1719091 1719159 69 2 [0] [1] 3 ydhF aldo/keto reductase family oxidoreductase
* * ÷ NZ_CP009273 1720772 1720831 60 2 [1] [1] 2 nemR DNA‑binding transcriptional regulator NemR
* * ÷ NZ_CP009273 1727565 1727608 44 2 [1] [1] 2 lhr ATP‑dependent helicase
* * ÷ NZ_CP009273 1728895 1728935 41 2 [0] [1] 2 mepH peptidoglycan DD‑endopeptidase MepH
* * ÷ NZ_CP009273 1731552 1731591 40 2 [0] [1] 2 ydhP/ynhF MFS transporter/cytochrome bd‑I accessory subunit CydH
* * ÷ NZ_CP009273 1732608 1732676 69 2 [0] [1] 4 purR HTH‑type transcriptional repressor PurR
* * ÷ NZ_CP009273 1735918 1735956 39 2 [0] [1] 3 cfa cyclopropane fatty acyl phospholipid synthase
* * ÷ NZ_CP009273 1742992 1742996 5 3 [1] [1] 3 [ydhS] [ydhS]
* * ÷ NZ_CP009273 1747840 1747866 27 2 [0] [1] 3 ydhV aldehyde ferredoxin oxidoreductase
* * ÷ NZ_CP009273 1764254 1764379 126 2 [1] [1] 2 ydiK AI‑2E family transporter YdiK
* * ÷ NZ_CP009273 1772572 1772577 6 2 [0] [0] 2 ydiO acyl‑CoA dehydrogenase
* * ÷ NZ_CP009273 1776065 1776110 46 2 [1] [1] 2 ydiS FAD‑dependent oxidoreductase
* * ÷ NZ_CP009273 1778634 1778660 27 3 [1] [1] 2 fadK medium‑chain fatty‑acid‑‑CoA ligase
* * ÷ NZ_CP009273 1781531 1781645 115 2 [1] [1] 2 ppsA/ppsR phosphoenolpyruvate synthase/posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR
* * ÷ NZ_CP009273 1782998 1783046 49 2 [0] [1] 2 aroH 3‑deoxy‑7‑phosphoheptulonate synthase AroH
* * ÷ NZ_CP009273 1786880 1786964 85 3 [1] [1] 2 nlpC NlpC/P60 family protein
* * ÷ NZ_CP009273 1788267 1788381 115 2 [1] [1] 3 [btuE] [btuE]
* * ÷ NZ_CP009273 1792664 1792729 66 2 [1] [1] 2 pheS phenylalanine‑‑tRNA ligase subunit alpha
* * ÷ NZ_CP009273 1800415 1800525 111 2 [1] [1] 2 ydiY/pfkB YdiY family protein/6‑phosphofructokinase II
* * ÷ NZ_CP009273 1807724 1807724 1 2 [0] [0] 2 cedA cell division activator CedA
* * ÷ NZ_CP009273 1807878 1808160 283 2 [1] [0] 4 [cedA]–[katE] [cedA],[katE]
* * ÷ NZ_CP009273 1809363 1809370 8 2 [0] [1] 2 katE catalase HPII
* * ÷ NZ_CP009273 1819199 1819223 25 2 [0] [1] 2 ves/spy environmental stress‑induced protein Ves/ATP‑independent periplasmic protein‑refolding chaperone Spy
* * ÷ NZ_CP009273 1819616 1819664 49 2 [1] [1] 2 spy ATP‑independent periplasmic protein‑refolding chaperone Spy
* * ÷ NZ_CP009273 1822337 1822402 66 2 [1] [1] 2 astB N‑succinylarginine dihydrolase
* * ÷ NZ_CP009273 1825802 1825857 56 5 [1] [1] 2 astC succinylornithine/acetylornithine transaminase
* * ÷ NZ_CP009273 1828533 1828545 13 3 [1] [1] 2 ydjY lipoprotein YdjY
* * ÷ NZ_CP009273 1841766 1841797 32 2 [1] [1] 2 selD selenide, water dikinase SelD
* * ÷ NZ_CP009273 1849822 1849860 39 3 [1] [1] 2 ydjG NADH‑dependent methylglyoxal reductase
* * ÷ NZ_CP009273 1853918 1853954 37 3 [1] [1] 2 ydjK MFS transporter
* * ÷ NZ_CP009273 1868542 1868542 1 2 [0] [0] 2 BW25113_RS09355/yeaL hypothetical protein/DUF441 domain‑containing protein
* * ÷ NZ_CP009273 1868669 1868731 63 3 [1] [1] 2 yeaL DUF441 domain‑containing protein
* * ÷ NZ_CP009273 1876938 1876987 50 2 [1] [1] 2 dmlA multifunctional D‑malate/3‑isopropylmalate/tartarate dehydrogenase
* * ÷ NZ_CP009273 1882489 1882532 44 2 [1] [1] 2 fadD long‑chain‑fatty‑acid‑‑CoA ligase FadD
* * ÷ NZ_CP009273 1882997 1883079 83 2 [0] [1] 2 fadD long‑chain‑fatty‑acid‑‑CoA ligase FadD
* * ÷ NZ_CP009273 1887280 1887340 61 2 [1] [1] 2 yoaA ATP‑dependent DNA helicase
* * ÷ NZ_CP009273 1888350 1888358 9 2 [0] [1] 2 yoaB/yoaC RidA family protein/DUF1889 family protein
* * ÷ NZ_CP009273 1899123 1899125 3 2 [0] [1] 2 yobD DUF986 family protein
* * ÷ NZ_CP009273 1906213 1906228 16 2 [1] [0] 2 htpX protease HtpX
* * ÷ NZ_CP009273 1907651 1907792 142 2 [1] [1] 2 prc carboxy terminal‑processing peptidase
* * ÷ NZ_CP009273 1915169 1915214 46 2 [1] [0] 2 rsmF 16S rRNA (cytosine(1407)‑C(5))‑methyltransferase RsmF
* * ÷ NZ_CP009273 1919098 1919109 12 3 [0] [1] 2 yobA CopC domain‑containing protein YobA
* * ÷ NZ_CP009273 1920893 1920909 17 2 [1] [1] 5 exoX exodeoxyribonuclease X
* * ÷ NZ_CP009273 1921650 1921672 23 4 [1] [1] 2 ptrB oligopeptidase B
* * ÷ NZ_CP009273 1936103 1936181 79 2 [1] [1] 2 znuA zinc ABC transporter substrate‑binding protein ZnuA
* * ÷ NZ_CP009273 1938399 1938424 26 2 [1] [0] 2 znuB zinc ABC transporter permease subunit ZnuB
* * ÷ NZ_CP009273 1948199 1948213 15 2 [1] [1] 3 cmoB tRNA 5‑methoxyuridine(34)/uridine 5‑oxyacetic acid(34) synthase CmoB
* * ÷ NZ_CP009273 1949887 1949921 35 2 [1] [1] 2 torZ trimethylamine N‑oxide reductase TorZ
* * ÷ NZ_CP009273 1957322 1957330 9 2 [1] [1] 2 flhA flagellar biosynthesis protein FlhA
* * ÷ NZ_CP009273 1962420 1962467 48 2 [1] [1] 3 cheB protein‑glutamate methylesterase/protein glutamine deamidase
* * ÷ NZ_CP009273 1965502 1965530 29 2 [1] [1] 2 tar methyl‑accepting chemotaxis protein II
* * ÷ NZ_CP009273 1968285 1968356 72 3 [1] [1] 2 cheA chemotaxis protein CheA
* * ÷ NZ_CP009273 1974229 1974297 69 2 [1] [0] 3 otsA alpha,alpha‑trehalose‑phosphate synthase
* * ÷ NZ_CP009273 1990575 1990603 29 2 [0] [1] 2 yecC L‑cystine ABC transporter ATP‑binding protein YecC
* * ÷ NZ_CP009273 1993596 1993620 25 2 [1] [0] 3 tcyJ cystine ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 1997543 1997583 41 3 [0] [1] 2 fliD flagellar filament capping protein FliD
* * ÷ NZ_CP009273 2001028 2001113 86 3 [0] [1] 2 amyA alpha‑amylase
* * ÷ NZ_CP009273 2002252 2002278 27 2 [0] [1] 2 yedE selenium metabolism membrane protein YedE/FdhT
* * ÷ NZ_CP009273 2009227 2009245 19 3 [1] [1] 2 fliG flagellar motor switch protein FliG
* * ÷ NZ_CP009273 2016831 2016879 49 2 [1] [1] 3 fliR flagellar biosynthetic protein FliR
* * ÷ NZ_CP009273 2023246 2023251 6 2 [0] [1] 2 yedA drug/metabolite exporter YedA
* * ÷ NZ_CP009273 2032896 2032928 33 3 [1] [1] 2 hiuH/msrP hydroxyisourate hydrolase/protein‑methionine‑sulfoxide reductase catalytic subunit MsrP
* * ÷ NZ_CP009273 2033507 2033592 86 2 [1] [1] 2 msrP protein‑methionine‑sulfoxide reductase catalytic subunit MsrP
* * ÷ NZ_CP009273 2054472 2054511 40 2 [1] [1] 2 [nac] [nac]
* * ÷ NZ_CP009273 2057092 2057166 75 2 [1] [1] 4 cobT nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase
* * ÷ NZ_CP009273 2068831 2068878 48 2 [1] [1] 2 BW25113_RS10450 hypothetical protein
* * ÷ NZ_CP009273 2074926 2074961 36 2 [1] [0] 2 dacD serine‑type D‑Ala‑D‑Ala carboxypeptidase DacD
* * ÷ NZ_CP009273 2080872 2080904 33 2 [1] [1] 2 yeeY LysR substrate‑binding domain‑containing protein
* * ÷ NZ_CP009273 2081141 2081163 23 2 [0] [1] 3 yeeY LysR substrate‑binding domain‑containing protein
* * ÷ NZ_CP009273 2088648 2088731 84 3 [1] [1] 2 hisA 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase
* * ÷ NZ_CP009273 2088876 2088942 67 2 [1] [1] 2 hisA 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase
* * ÷ NZ_CP009273 2101618 2101656 39 2 [0] [0] 2 glf UDP‑galactopyranose mutase
* * ÷ NZ_CP009273 2102026 2102031 6 2 [1] [1] 2 wzx O16 family O‑antigen flippase
* * ÷ NZ_CP009273 2112644 2112652 9 2 [0] [0] 2 wzxC colanic acid undecaprenyl disphosphate flippase WzxC
* * ÷ NZ_CP009273 2118425 2118486 62 2 [1] [1] 2 wcaI colanic acid biosynthesis fucosyltransferase WcaI
* * ÷ NZ_CP009273 2125293 2125426 134 3 [1] [1] 2 wcaC colanic acid biosynthesis glycosyltransferase WcaC
* * ÷ NZ_CP009273 2125654 2125725 72 2 [1] [1] 5 wcaB colanic acid biosynthesis acetyltransferase WcaB
* * ÷ NZ_CP009273 2127848 2127882 35 2 [1] [1] 2 wzc tyrosine‑protein kinase Wzc
* * ÷ NZ_CP009273 2128026 2128045 20 4 [1] [1] 2 wzc tyrosine‑protein kinase Wzc
* * ÷ NZ_CP009273 2131072 2131097 26 2 [1] [0] 2 wza/yegH polysaccharide export protein Wza/TerC family protein
* * ÷ NZ_CP009273 2132057 2132072 16 2 [0] [1] 3 yegH TerC family protein
* * ÷ NZ_CP009273 2132268 2132273 6 2 [0] [1] 3 yegH TerC family protein
* * ÷ NZ_CP009273 2136693 2136733 41 5 [1] [1] 2 udk/dgcE uridine kinase/diguanylate cyclase
* * ÷ NZ_CP009273 2144499 2144588 90 2 [1] [1] 2 yegI/yegJ protein kinase YegI/DUF2314 domain‑containing protein
* * ÷ NZ_CP009273 2149331 2149398 68 2 [1] [1] 6 mdtB multidrug efflux RND transporter permease subunit MdtB
* * ÷ NZ_CP009273 2157467 2157505 39 2 [1] [1] 2 baeS two‑component system sensor histidine kinase BaeS
* * ÷ NZ_CP009273 2168827 2168858 32 2 [1] [1] 2 gatZ tagatose‑bisphosphate aldolase subunit GatZ
* * ÷ NZ_CP009273 2170677 2170729 53 2 [1] [1] 2 [gatY] [gatY]
* * ÷ NZ_CP009273 2170771 2170857 87 2 [1] [1] 2 gatY/fbaB tagatose‑bisphosphate aldolase subunit GatY/class I fructose‑bisphosphate aldolase
* * ÷ NZ_CP009273 2174213 2174236 24 2 [0] [1] 2 yegU ADP‑ribosylglycohydrolase family protein
* * ÷ NZ_CP009273 2174603 2174679 77 2 [1] [1] 2 yegV carbohydrate kinase family protein
* * ÷ NZ_CP009273 2189091 2189182 92 3 [1] [1] 2 metG methionine‑‑tRNA ligase
* * ÷ NZ_CP009273 2189485 2189495 11 2 [1] [0] 2 metG methionine‑‑tRNA ligase
* * ÷ NZ_CP009273 2211953 2211988 36 2 [1] [1] 2 yehY glycine betaine ABC transporter permease YehY
* * ÷ NZ_CP009273 2214653 2214686 34 5 [1] [1] 2 bglX beta‑glucosidase BglX
* * ÷ NZ_CP009273 2217394 2217413 20 2 [1] [1] 2 dld/pbpG D‑lactate dehydrogenase/D‑alanyl‑D‑alanine endopeptidase
* * ÷ NZ_CP009273 2219021 2219031 11 2 [1] [1] 4 yohC Yip1 family protein
* * ÷ NZ_CP009273 2249175 2249195 21 3 [1] [0] 2 yeiL transcriptional regulator YeiL
* * ÷ NZ_CP009273 2249263 2249272 10 2 [0] [1] 2 yeiL transcriptional regulator YeiL
* * ÷ NZ_CP009273 2303210 2303225 16 2 [1] [0] 2 ada bifunctional DNA‑binding transcriptional regulator/O6‑methylguanine‑DNA methyltransferase Ada
* * ÷ NZ_CP009273 2326255 2326329 75 4 [1] [1] 3 BW25113_RS11635 alpha‑2‑macroglobulin family protein
* * ÷ NZ_CP009273 2327749 2327785 37 2 [1] [1] 2 BW25113_RS11635 alpha‑2‑macroglobulin family protein
* * ÷ NZ_CP009273 2335763 2335835 73 3 [1] [1] 2 yfaL AIDA‑I family autotransporter adhesin YfaL/EhaC
* * ÷ NZ_CP009273 2337808 2337880 73 2 [1] [1] 2 yfaL/nrdA AIDA‑I family autotransporter adhesin YfaL/EhaC/ribonucleoside‑diphosphate reductase subunit alpha
* * ÷ NZ_CP009273 2345972 2345988 17 3 [1] [1] 2 glpT/glpA glycerol‑3‑phosphate transporter/anaerobic glycerol‑3‑phosphate dehydrogenase subunit A
* * ÷ NZ_CP009273 2346082 2346113 32 2 [1] [1] 2 glpT/glpA glycerol‑3‑phosphate transporter/anaerobic glycerol‑3‑phosphate dehydrogenase subunit A
* * ÷ NZ_CP009273 2361255 2361298 44 3 [1] [1] 2 arnC undecaprenyl‑phosphate 4‑deoxy‑4‑formamido‑L‑arabinose transferase
* * ÷ NZ_CP009273 2363916 2363969 54 3 [1] [1] 2 arnD 4‑deoxy‑4‑formamido‑L‑arabinose‑ phosphoundecaprenol deformylase
* * ÷ NZ_CP009273 2379271 2379369 99 2 [1] [1] 3 [yfbL] [yfbL]
* * ÷ NZ_CP009273 2463635 2463743 109 2 [1] [1] 4 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2494476 2494509 34 2 [1] [1] 2 ypdB two‑component system response regulator YpdB
* * ÷ NZ_CP009273 2495728 2495798 71 3 [1] [1] 2 ptsP phosphoenolpyruvate‑‑protein phosphotransferase
* * ÷ NZ_CP009273 2505194 2505343 150 3 [1] [1] 3 mntH Nramp family divalent metal transporter
* * ÷ NZ_CP009273 2505750 2505821 72 2 [1] [1] 2 mntH Nramp family divalent metal transporter
* * ÷ NZ_CP009273 2506617 2506653 37 2 [0] [1] 4 nupC nucleoside permease NupC
* * ÷ NZ_CP009273 2535242 2535256 15 2 [0] [0] 3 cysT sulfate/thiosulfate ABC transporter permease CysT
* * ÷ NZ_CP009273 2541323 2541327 5 2 [1] [1] 3 murP PTS N‑acetylmuramic acid transporter subunit IIBC
* * ÷ NZ_CP009273 2560066 2560086 21 3 [0] [1] 4 eutA ethanolamine ammonia‑lyase reactivating factor EutA
* * ÷ NZ_CP009273 2563572 2563585 14 2 [1] [0] 2 eutJ ethanolamine utilization protein EutJ
* * ÷ NZ_CP009273 2595655 2595678 24 3 [1] [1] 2 hyfB hydrogenase 4 subunit B
* * ÷ NZ_CP009273 2596200 2596248 49 2 [1] [1] 2 hyfB hydrogenase 4 subunit B
* * ÷ NZ_CP009273 2600385 2600396 12 2 [0] [1] 2 hyfF hydrogenase 4 subunit F
* * ÷ NZ_CP009273 2607104 2607131 28 2 [1] [1] 2 hyfR DNA‑binding transcriptional regulator HyfR
* * ÷ NZ_CP009273 2608630 2608649 20 3 [0] [1] 2 yfgO AI‑2E family transporter
* * ÷ NZ_CP009273 2613653 2613725 73 2 [1] [1] 2 upp uracil phosphoribosyltransferase
* * ÷ NZ_CP009273 2617433 2617447 15 2 [1] [1] 2 ppk1 polyphosphate kinase 1
* * ÷ NZ_CP009273 2644484 2644535 52 2 [1] [1] 2 yfhM alpha2‑macroglobulin
* * ÷ NZ_CP009273 2651887 2651897 11 2 [0] [1] 3 hscA Fe‑S protein assembly chaperone HscA
* * ÷ NZ_CP009273 2653391 2653444 54 2 [1] [1] 2 iscU Fe‑S cluster assembly scaffold IscU
* * ÷ NZ_CP009273 2658721 2658795 75 2 [1] [1] 2 [csiE] [csiE]
* * ÷ NZ_CP009273 2668636 2668645 10 4 [0] [0] 2 yphC zinc‑binding dehydrogenase
* * ÷ NZ_CP009273 2677334 2677374 41 2 [1] [1] 2 yphH ROK family protein
* * ÷ NZ_CP009273 2681064 2681110 47 2 [1] [1] 2 glrR two‑component system response regulator GlrR
* * ÷ NZ_CP009273 2698061 2698065 5 2 [0] [1] 3 lepB signal peptidase I
* * ÷ NZ_CP009273 2709579 2709672 94 2 [1] [1] 2 grcA autonomous glycyl radical cofactor GrcA
* * ÷ NZ_CP009273 2711475 2711526 52 2 [0] [1] 2 yfiF tRNA/rRNA methyltransferase
* * ÷ NZ_CP009273 2715427 2715496 70 2 [1] [1] 2 pat protein lysine acetyltransferase
* * ÷ NZ_CP009273 2738102 2738145 44 2 [1] [1] 2 trmD tRNA (guanosine(37)‑N1)‑methyltransferase TrmD
* * ÷ NZ_CP009273 2746774 2746804 31 6 [1] [1] 2 recN DNA repair protein RecN
* * ÷ NZ_CP009273 2753702 2753738 37 2 [1] [1] 2 yfjI YfjI family protein
* * ÷ NZ_CP009273 2779402 2779451 50 3 [1] [1] 2 BW25113_RS13825/BW25113_RS26005 tRNA‑Ile/alpha‑amylase family glycosyl hydrolase
* * ÷ NZ_CP009273 2801800 2801854 55 3 [1] [1] 2 BW25113_RS13950 MFS transporter
* * ÷ NZ_CP009273 2897127 2897287 161 2 [0] [1] 2 ygcE/queE FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE
* * ÷ NZ_CP009273 2898975 2899047 73 2 [1] [1] 2 BW25113_RS14445 hypothetical protein
* * ÷ NZ_CP009273 2903816 2903829 14 2 [1] [0] 2 mazG nucleoside triphosphate pyrophosphohydrolase
* * ÷ NZ_CP009273 2905450 2905459 10 2 [1] [1] 2 relA GTP pyrophosphokinase
* * ÷ NZ_CP009273 2929399 2929474 76 2 [1] [0] 2 fucI L‑fucose isomerase
* * ÷ NZ_CP009273 2981673 2981693 21 2 [1] [0] 4 yqeH/yqeI helix‑turn‑helix transcriptional regulator/transcriptional regulator
* * ÷ NZ_CP009273 3029841 3029882 42 2 [1] [0] 2 recJ single‑stranded‑DNA‑specific exonuclease RecJ
* * ÷ NZ_CP009273 3095369 3095384 16 2 [1] [1] 2 yggL YggL family protein
* * ÷ NZ_CP009273 3129894 3129944 51 2 [1] [1] 2 pitB/gss inorganic phosphate transporter PitB/bifunctional glutathionylspermidine amidase/synthase
* * ÷ NZ_CP009273 3136965 3136967 3 2 [1] [0] 2 hybB Ni/Fe‑hydrogenase cytochrome b subunit
* * ÷ NZ_CP009273 3178647 3178756 110 2 [1] [1] 3 ubiK/ygiL ubiquinone biosynthesis accessory factor UbiK/fimbrial‑like protein
* * ÷ NZ_CP009273 3261636 3261680 45 2 [1] [1] 3 BW25113_RS16190 hypothetical protein
* * ÷ NZ_CP009273 3266111 3266134 24 2 [1] [1] 2 [garR] [garR]
* * ÷ NZ_CP009273 3353604 3353614 11 3 [0] [1] 2 gltD glutamate synthase subunit GltD
* * ÷ NZ_CP009273 3354267 3354318 52 2 [1] [1] 2 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein
* * ÷ NZ_CP009273 3354402 3354437 36 2 [1] [1] 2 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein
* * ÷ NZ_CP009273 3368827 3368843 17 2 [1] [0] 2 dcuC anaerobic C4‑dicarboxylate transporter DcuC
* * ÷ NZ_CP009273 3378952 3378996 45 2 [1] [1] 2 yhcN peroxide/acid stress response protein YhcN
* * ÷ NZ_CP009273 3396428 3396438 11 3 [0] [0] 3 csrD RNase E specificity factor CsrD
* * ÷ NZ_CP009273 3575397 3575440 44 3 [1] [0] 2 hcp Hcp1 family type VI secretion system effector
* * ÷ NZ_CP009273 3646776 3646789 14 2 [0] [1] 3 BW25113_RS18165 hypothetical protein
* * ÷ NZ_CP009273 3751283 3751335 53 2 [1] [1] 2 yiaY/selB L‑threonine dehydrogenase/selenocysteine‑specific translation elongation factor
* * ÷ NZ_CP009273 3763099 3763131 33 2 [0] [1] 2 BW25113_RS26240 Imm57 family immunity protein
* * ÷ NZ_CP009273 3830031 3830132 102 2 [1] [1] 2 BW25113_RS26245/setC virulence RhuM family protein/sugar efflux transporter
* * ÷ NZ_CP009273 3932245 3932260 16 2 [0] [0] 3 rbsR ribose operon transcriptional repressor RbsR
* * ÷ NZ_CP009273 3949120 3949218 99 2 [1] [1] 3 ilvA threonine ammonia‑lyase, biosynthetic
* * ÷ NZ_CP009273 3977389 3977424 36 2 [1] [1] 2 aslB anaerobic sulfatase maturase
* * ÷ NZ_CP009273 4084570 4084580 11 2 [0] [0] 2 frvB PTS fructose‑like transporter subunit IIBC
* * ÷ NZ_CP009273 4211926 4211936 11 2 [1] [1] 2 espL4 type III secretion system effector EspL4
* * ÷ NZ_CP009273 4317235 4317260 26 2 [1] [1] 3 crfC clamp‑binding protein CrfC
* * ÷ NZ_CP009273 4414490 4414490 1 2 [0] [0] 3 yjfY DUF1471 family protein YjfY
* * ÷ NZ_CP009273 4466789 4466868 80 2 [1] [0] 2 BW25113_RS22080 hypothetical protein
* * ÷ NZ_CP009273 4581322 4581355 34 2 [1] [1] 2 btsT/tsr pyruvate/proton symporter BtsT/methyl‑accepting chemotaxis protein

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 360104 =NA (NA)33 (3.240) 23/168 0.0 NA intergenic (‑35/+251) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
?NZ_CP009273 = 360286 NA (NA)intergenic (‑217/+69) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
* ? NZ_CP009273 1203246 =3 (0.290)4 (0.490) 4/136 0.5 76.8% coding (290/630 nt) BW25113_RS05990 hypothetical protein
?NZ_CP009273 1205075 = 0 (0.000)coding (40/540 nt) BW25113_RS06005 phage tail protein
* ? NZ_CP009273 = 1391494NA (NA)8 (0.800) 5/166 0.5 100% intergenic (+145/‑128) BW25113_RS06980/ynaJ IS5‑like element IS5 family transposase/DUF2534 family protein
?NZ_CP009273 1972747 = 0 (0.000)intergenic (‑293/‑487) flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
* ? NZ_CP009273 = 19727510 (0.000)11 (1.080) 9/168 0.2 100% intergenic (‑297/‑483) flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
?NZ_CP009273 = 2283592 NA (NA)intergenic (‑68/‑387) BW25113_RS11435/narP IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP