breseq  version 0.33.1  revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation freq annotation gene description
RA 4,139 G→A 6.0% D136N (GAT→AAT) ‡ thrC → L‑threonine synthase
RA 4,140 A→T 6.0% D136V (GAT→GTT) ‡ thrC → L‑threonine synthase
RA 11,127 C→G 9.0% S77T (AGT→ACT)  yaaW ← UPF0174 family protein
RA 72,205 T→G 6.2% intergenic (+90/+24) yabI → / ← thiQ DedA family inner membrane protein/thiamine/thiamine pyrophosphate ABC transporter ATPase
RA 83,587 A→C 36.4% intergenic (‑58/+35) leuA ← / ← leuL 2‑isopropylmalate synthase/leu operon leader peptide
RA 83,590 G→T 40.0% intergenic (‑61/+32) leuA ← / ← leuL 2‑isopropylmalate synthase/leu operon leader peptide
RA 120,154 Δ1 bp 16.2% intergenic (+19/+24) ampE → / ← aroP ampicillin resistance inner membrane protein; putative signaling protein in beta‑lactamase regulation/aromatic amino acid transporter
RA 120,158:1 +A 17.1% intergenic (+23/+20) ampE → / ← aroP ampicillin resistance inner membrane protein; putative signaling protein in beta‑lactamase regulation/aromatic amino acid transporter
RA 121,230 T→C 6.3% M108V (ATG→GTG)  aroP ← aromatic amino acid transporter
RA 125,232 T→G 9.4% V739G (GTC→GGC)  aceE → pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate‑binding
RA 125,724 C→T 5.7% I10I (ATC→ATT aceF → pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2
RA 138,784 C→T 9.5% intergenic (+151/+51) cueO → / ← gcd multicopper oxidase (laccase)/glucose dehydrogenase
RA 138,789 C→G 9.6% intergenic (+156/+46) cueO → / ← gcd multicopper oxidase (laccase)/glucose dehydrogenase
RA 138,792 C→G 11.8% intergenic (+159/+43) cueO → / ← gcd multicopper oxidase (laccase)/glucose dehydrogenase
RA 138,797 A→G 11.8% intergenic (+164/+38) cueO → / ← gcd multicopper oxidase (laccase)/glucose dehydrogenase
RA 143,533 T→C 6.0% L252P (CTG→CCG) ‡ yadG → putative ABC transporter ATPase
RA 143,534 G→A 7.1% L252L (CTG→CTA) ‡ yadG → putative ABC transporter ATPase
RA 151,519 A→C 12.5% I27M (ATT→ATG yadK ← putative fimbrial‑like adhesin protein
RA 151,522 G→T 12.9% A26A (GCC→GCA yadK ← putative fimbrial‑like adhesin protein
RA 172,496 A→G 7.1% Q345Q (CAA→CAG fhuB → iron(3+)‑hydroxamate import ABC transporter permease
RA 172,499 T→C 6.9% H346H (CAT→CAC fhuB → iron(3+)‑hydroxamate import ABC transporter permease
RA 172,500 G→A 6.9% V347M (GTG→ATG)  fhuB → iron(3+)‑hydroxamate import ABC transporter permease
RA 172,503 C→T 6.9% L348L (CTG→TTG)  fhuB → iron(3+)‑hydroxamate import ABC transporter permease
RA 208,552 T→A 9.9% L1143I (TTA→ATA)  dnaE → DNA polymerase III alpha subunit
RA 236,121 A→G 6.7% N19D (AAC→GAC)  dnaQ → DNA polymerase III epsilon subunit
RA 256,449 T→C 7.0% intergenic (+14/‑78) gpt → / → frsA xanthine phosphoribosyltransferase; xanthine‑guanine phosphoribosyltransferase/fermentation‑respiration switch protein; PTS Enzyme IIA(Glc)‑binding protein; pNP‑butyrate esterase activity
RA 256,454 C→G 7.1% intergenic (+19/‑73) gpt → / → frsA xanthine phosphoribosyltransferase; xanthine‑guanine phosphoribosyltransferase/fermentation‑respiration switch protein; PTS Enzyme IIA(Glc)‑binding protein; pNP‑butyrate esterase activity
MC JC 257,908 Δ776 bp 100% [crl] [crl]
RA 285,882 T→G 6.0% I163S (ATC→AGC)  yagG → CP4‑6 prophage; putative sugar transporter
RA 285,887 C→A 6.2% L165M (CTG→ATG)  yagG → CP4‑6 prophage; putative sugar transporter
RA 289,863 T→A 5.3% H148L (CAC→CTC)  argF ← ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage
RA 289,866 T→A 5.3% E147V (GAG→GTG)  argF ← ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage
RA 302,225 T→A 6.2% N117Y (AAT→TAT)  paoA ← PaoABC aldehyde oxidoreductase, 2Fe‑2S subunit
RA 302,227 A→T 6.0% L116H (CTT→CAT)  paoA ← PaoABC aldehyde oxidoreductase, 2Fe‑2S subunit
RA 374,682 C→T 10.2% P272L (CCG→CTG) ‡ mhpE → 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I
RA 374,683 G→C 10.0% P272P (CCG→CCC) ‡ mhpE → 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I
RA 374,688 G→C 8.8% R274P (CGA→CCA) ‡ mhpE → 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I
RA 374,689 A→G 8.8% R274R (CGA→CGG) ‡ mhpE → 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I
RA 380,797 G→A 10.3% P16S (CCC→TCC)  yaiO ← outer membrane protein
RA 381,301 A→T 9.1% intergenic (‑41/‑50) yaiX ← / → insC1 pseudogene, interrupted by IS2A; hexapeptide transferase superfamily; putative transferase/IS2 repressor TnpA
RA 381,302 A→T 9.1% intergenic (‑42/‑49) yaiX ← / → insC1 pseudogene, interrupted by IS2A; hexapeptide transferase superfamily; putative transferase/IS2 repressor TnpA
RA 397,273 C→T 5.8% A212V (GCC→GTC)  sbmA → peptide antibiotic transporter
RA 397,277 C→G 5.7% I213M (ATC→ATG sbmA → peptide antibiotic transporter
RA 397,281 A→G 5.4% T215A (ACG→GCG)  sbmA → peptide antibiotic transporter
RA 420,941 T→A 14.7% intergenic (+31/‑45) brnQ → / → proY branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val/proline‑specific permease
RA 420,942 G→T 14.7% intergenic (+32/‑44) brnQ → / → proY branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val/proline‑specific permease
RA 420,945 A→C 15.6% intergenic (+35/‑41) brnQ → / → proY branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val/proline‑specific permease
RA 420,946 T→A 16.1% intergenic (+36/‑40) brnQ → / → proY branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val/proline‑specific permease
RA 472,811 G→T 6.7% E72* (GAA→TAA)  glnK → nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB
RA 475,971 C→G 16.9% intergenic (+20/+11) ybaY → / ← ybaZ outer membrane lipoprotein/excision repair protein, alkyltransferase‑like protein ATL
RA 475,972 C→G 16.9% intergenic (+21/+10) ybaY → / ← ybaZ outer membrane lipoprotein/excision repair protein, alkyltransferase‑like protein ATL
RA 489,958 T→C 18.5% intergenic (+60/+152) mscK → / ← ybaM mechanosensitive channel protein, intermediate conductance, K+ regulated/DUF2496 family protein
RA 489,963 G→C 17.9% intergenic (+65/+147) mscK → / ← ybaM mechanosensitive channel protein, intermediate conductance, K+ regulated/DUF2496 family protein
RA 543,091 G→C 44.4% intergenic (+58/+170) glxK → / ← allE glycerate kinase II/S‑ureidoglycine aminohydrolase
RA 543,094 G→C 44.2% intergenic (+61/+167) glxK → / ← allE glycerate kinase II/S‑ureidoglycine aminohydrolase
RA 553,885 G→A 7.7% T19I (ACC→ATC)  lpxH ← UDP‑2,3‑diacylglucosamine pyrophosphohydrolase
RA 553,887 G→C 7.5% I18M (ATC→ATG) ‡ lpxH ← UDP‑2,3‑diacylglucosamine pyrophosphohydrolase
RA 553,889 T→C 7.8% I18V (ATC→GTC) ‡ lpxH ← UDP‑2,3‑diacylglucosamine pyrophosphohydrolase
RA 579,084 C→T 9.1% intergenic (‑191/+100) borD ← / ← ybcV DLP12 prophage; putative lipoprotein/DLP12 prophage; uncharacterized protein
RA 594,946 C→A 9.1% Q166H (CAG→CAT) ‡ cusR ← response regulator in two‑component regulatory system with CusS
RA 594,948 G→C 9.1% Q166E (CAG→GAG) ‡ cusR ← response regulator in two‑component regulatory system with CusS
RA 594,950 T→G 8.9% H165P (CAT→CCT)  cusR ← response regulator in two‑component regulatory system with CusS
RA 624,659 A→T 6.7% intergenic (‑149/‑226) fepB ← / → entC ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1
RA 624,664 G→T 6.2% intergenic (‑154/‑221) fepB ← / → entC ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1
RA 624,665 G→C 6.2% intergenic (‑155/‑220) fepB ← / → entC ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1
RA 624,666 A→C 7.5% intergenic (‑156/‑219) fepB ← / → entC ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1
RA 624,671 A→T 6.2% intergenic (‑161/‑214) fepB ← / → entC ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1
RA 639,654 T→C 18.7% intergenic (+146/‑99) ahpC → / → ahpF alkyl hydroperoxide reductase, C22 subunit/alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding
RA 639,657 G→A 18.7% intergenic (+149/‑96) ahpC → / → ahpF alkyl hydroperoxide reductase, C22 subunit/alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding
RA 659,204 C→T 16.7% intergenic (+54/+47) tatE → / ← lipA TatABCE protein translocation system subunit/lipoate synthase
RA 659,205 A→T 18.3% intergenic (+55/+46) tatE → / ← lipA TatABCE protein translocation system subunit/lipoate synthase
RA 659,206 A→T 18.3% intergenic (+56/+45) tatE → / ← lipA TatABCE protein translocation system subunit/lipoate synthase
RA 659,207 A→G 18.5% intergenic (+57/+44) tatE → / ← lipA TatABCE protein translocation system subunit/lipoate synthase
RA 665,094 G→C 14.1% P33A (CCT→GCT)  rlpA ← septal ring protein, suppressor of prc, minor lipoprotein
RA 732,503 G→A 9.0% R974Q (CGG→CAG)  rhsC → Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
RA 732,506 T→C 8.9% L975P (CTG→CCG)  rhsC → Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
RA 744,699 G→T 6.0% G153C (GGC→TGC)  ybgK → putative allophanate hydrolase, subunit 2
RA 744,702 A→C 6.0% K154Q (AAA→CAA)  ybgK → putative allophanate hydrolase, subunit 2
RA 756,643 T→A 11.1% I246N (ATT→AAT)  sdhA → succinate dehydrogenase, flavoprotein subunit
RA 781,824 C→T 22.1% intergenic (+172/‑261) lysQ → / → nadA tRNA‑Lys/quinolinate synthase, subunit A
RA 781,826 A→T 21.0% intergenic (+174/‑259) lysQ → / → nadA tRNA‑Lys/quinolinate synthase, subunit A
RA 781,828 A→G 20.9% intergenic (+176/‑257) lysQ → / → nadA tRNA‑Lys/quinolinate synthase, subunit A
RA 803,409 C→T 8.3% intergenic (+89/‑94) ybhI → / → ybhJ putative DASS family tricarboxylate or dicarboxylate transporter/aconitase family protein
RA 816,710 A→T 5.9% intergenic (‑63/‑334) ybhK ← / → moaA putative CofD superfamily transferase/molybdopterin biosynthesis protein A
RA 847,213 A→T 9.6% intergenic (‑94/+45) glnP ← / ← glnH glutamine transporter subunit/glutamine transporter subunit
RA 847,214 T→A 9.6% intergenic (‑95/+44) glnP ← / ← glnH glutamine transporter subunit/glutamine transporter subunit
RA 847,215 A→T 9.6% intergenic (‑96/+43) glnP ← / ← glnH glutamine transporter subunit/glutamine transporter subunit
RA 869,724 A→C 9.6% N105T (AAC→ACC)  gsiB → glutathione ABC transporter periplasmic binding protein
RA 940,751 T→C 11.4% intergenic (+31/‑208) serS → / → dmsA seryl‑tRNA synthetase/dimethyl sulfoxide reductase, anaerobic, subunit A
RA 940,754 G→A 11.4% intergenic (+34/‑205) serS → / → dmsA seryl‑tRNA synthetase/dimethyl sulfoxide reductase, anaerobic, subunit A
RA 953,720 A→T 5.9% N249K (AAT→AAA focA ← formate channel
RA 958,769 C→G 12.8% intergenic (+28/‑43) serC → / → aroA 3‑phosphoserine/phosphohydroxythreonine aminotransferase/5‑enolpyruvylshikimate‑3‑phosphate synthetase
RA 958,771 A→T 12.6% intergenic (+30/‑41) serC → / → aroA 3‑phosphoserine/phosphohydroxythreonine aminotransferase/5‑enolpyruvylshikimate‑3‑phosphate synthetase
RA 958,773 C→G 12.8% intergenic (+32/‑39) serC → / → aroA 3‑phosphoserine/phosphohydroxythreonine aminotransferase/5‑enolpyruvylshikimate‑3‑phosphate synthetase
RA 964,148 T→C 7.8% intergenic (+36/‑172) ihfB → / → ycaI integration host factor (IHF), DNA‑binding protein, beta subunit/ComEC family inner membrane protein
RA 964,150 T→A 7.8% intergenic (+38/‑170) ihfB → / → ycaI integration host factor (IHF), DNA‑binding protein, beta subunit/ComEC family inner membrane protein
RA 964,152 G→A 8.3% intergenic (+40/‑168) ihfB → / → ycaI integration host factor (IHF), DNA‑binding protein, beta subunit/ComEC family inner membrane protein
RA 975,700 G→T 6.1% D27Y (GAC→TAC) ‡ mukE → chromosome condensin MukBEF, MukE localization factor
RA 975,701 A→C 6.1% D27A (GAC→GCC) ‡ mukE → chromosome condensin MukBEF, MukE localization factor
RA 1,018,983 A→T 13.9% intergenic (+46/+30) matP → / ← ompA Ter macrodomain organizer matS‑binding protein/outer membrane protein A (3a;II*;G;d)
RA 1,018,986 A→T 13.9% intergenic (+49/+27) matP → / ← ompA Ter macrodomain organizer matS‑binding protein/outer membrane protein A (3a;II*;G;d)
RA 1,022,599 G→T 6.4% P429T (CCA→ACA)  yccS ← putative transporter, FUSC superfamily inner membrane protein
RA 1,022,603 G→C 6.4% C427W (TGC→TGG yccS ← putative transporter, FUSC superfamily inner membrane protein
RA 1,041,937 T→G 12.5% intergenic (+22/+93) appA → / ← etk phosphoanhydride phosphorylase/tyrosine‑protein kinase, role in O‑antigen capsule formation
RA 1,041,940 C→A 15.6% intergenic (+25/+90) appA → / ← etk phosphoanhydride phosphorylase/tyrosine‑protein kinase, role in O‑antigen capsule formation
RA 1,048,429 C→T 7.3% W88* (TGG→TAG) ‡ gfcC ← putative O‑antigen capsule production periplasmic protein
RA 1,048,430 A→G 7.1% W88R (TGG→CGG) ‡ gfcC ← putative O‑antigen capsule production periplasmic protein
RA 1,060,121 T→G 9.1% V289G (GTT→GGT)  torA → trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit
RA 1,060,123 A→T 8.2% N290Y (AAC→TAC) ‡ torA → trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit
RA 1,060,125 C→A 8.6% N290K (AAC→AAA) ‡ torA → trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit
RA 1,097,623 G→A 8.7% noncoding (30/88 nt) serX ← tRNA‑Ser
RA 1,113,544 G→A 12.1% intergenic (+138/‑35) opgH → / → yceK OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein
RA 1,113,546 T→A 12.0% intergenic (+140/‑33) opgH → / → yceK OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein
RA 1,113,548 T→C 13.3% intergenic (+142/‑31) opgH → / → yceK OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein
RA 1,133,157 A→T 7.3% D195V (GAC→GTC)  flgE → flagellar hook protein
RA 1,151,873 T→A 14.3% intergenic (+22/‑66) acpP → / → fabF acyl carrier protein (ACP)/3‑oxoacyl‑[acyl‑carrier‑protein] synthase II
RA 1,151,874 T→A 14.3% intergenic (+23/‑65) acpP → / → fabF acyl carrier protein (ACP)/3‑oxoacyl‑[acyl‑carrier‑protein] synthase II
RA 1,178,848 A→T 5.6% K86* (AAA→TAA) ‡ nagK → N‑acetyl‑D‑glucosamine kinase
RA 1,178,849 A→T 5.6% K86I (AAA→ATA) ‡ nagK → N‑acetyl‑D‑glucosamine kinase
RA 1,193,973 A→C 8.5% W106G (TGG→GGG)  nudJ ← bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase
RA 1,201,015 A→T 5.4% T6T (ACT→ACA xisE ← e14 prophage; putative excisionase
RA 1,201,022 A→T 5.3% M4K (ATG→AAG) ‡ xisE ← e14 prophage; putative excisionase
RA 1,201,023 T→C 5.3% M4V (ATG→GTG) ‡ xisE ← e14 prophage; putative excisionase
RA 1,211,400 A→G 7.4% intergenic (+221/‑13) mcrA → / → icdC putative 5‑methylcytosine/5‑hydroxymethylcytosine‑specific restriction nuclease; 5‑methylcytosine DNA binding protein/pseudogene, isocitrate dehydrogenase C‑terminal gene fragment; idcC' is a 54 codon 3' gene fragment created during e14 prophage insertion
RA 1,226,114 C→G 6.8% intergenic (‑34/‑486) minC ← / → ycgJ inhibitor of FtsZ ring polymerization/uncharacterized protein
RA 1,226,115 A→C 5.4% intergenic (‑35/‑485) minC ← / → ycgJ inhibitor of FtsZ ring polymerization/uncharacterized protein
RA 1,226,118 G→T 5.4% intergenic (‑38/‑482) minC ← / → ycgJ inhibitor of FtsZ ring polymerization/uncharacterized protein
RA 1,226,119 C→G 5.4% intergenic (‑39/‑481) minC ← / → ycgJ inhibitor of FtsZ ring polymerization/uncharacterized protein
RA 1,256,416 A→T 87.8% intergenic (‑464/+305) ycgV ← / ← ychF putative adhesin/catalase inhibitor protein; ATPase, K+‑dependent, ribosome‑associated
RA 1,260,901 C→T 9.4% intergenic (‑98/+27) dauA ← / ← prs C4‑dicarboxylic acid transporter/phosphoribosylpyrophosphate synthase
RA 1,260,904 A→G 9.1% intergenic (‑101/+24) dauA ← / ← prs C4‑dicarboxylic acid transporter/phosphoribosylpyrophosphate synthase
RA 1,304,469 C→G 5.4% R212R (CGC→CGG oppC → oligopeptide ABC transporter permease
RA 1,304,474 T→A 5.4% I214N (ATT→AAT)  oppC → oligopeptide ABC transporter permease
RA 1,304,479 C→G 5.6% P216A (CCG→GCG)  oppC → oligopeptide ABC transporter permease
RA 1,342,169 C→A 5.1% H83Q (CAC→CAA pyrF → orotidine‑5'‑phosphate decarboxylase
RA 1,449,044 G→A 14.3% intergenic (+26/+32) feaB → / ← tynA phenylacetaldehyde dehydrogenase/tyramine oxidase, copper‑requiring
RA 1,491,756 G→A 13.3% G27D (GGT→GAT)  ydcA → putative periplasmic protein
RA 1,499,361 A→G 10.3% N142D (AAC→GAC)  rimL → ribosomal‑protein‑L7/L12‑serine acetyltransferase
RA 1,499,365 A→T 10.0% Q143L (CAG→CTG)  rimL → ribosomal‑protein‑L7/L12‑serine acetyltransferase
RA 1,499,369 C→T 10.2% V144V (GTC→GTT rimL → ribosomal‑protein‑L7/L12‑serine acetyltransferase
RA 1,517,481 C→G 7.4% R31R (CGC→CGG ydcX → DUF2566 family protein
RA 1,517,484 C→G 7.7% I32M (ATC→ATG ydcX → DUF2566 family protein
RA 1,522,716 T→A 7.6% D117V (GAC→GTC)  yncD ← putative iron outer membrane transporter
RA 1,535,870 T→A 8.9% intergenic (‑12/+67) yddE ← / ← narV PhzC‑PhzF family protein/nitrate reductase 2 (NRZ), gamma subunit
RA 1,535,873 G→C 8.9% intergenic (‑15/+64) yddE ← / ← narV PhzC‑PhzF family protein/nitrate reductase 2 (NRZ), gamma subunit
RA 1,535,876 T→A 8.6% intergenic (‑18/+61) yddE ← / ← narV PhzC‑PhzF family protein/nitrate reductase 2 (NRZ), gamma subunit
RA 1,698,585 T→G 6.6% E199A (GAA→GCA)  malI ← transcriptional repressor of Mal regulon
RA 1,698,587 T→A 6.6% A198A (GCA→GCT) ‡ malI ← transcriptional repressor of Mal regulon
RA 1,698,589 C→A 6.7% A198S (GCA→TCA) ‡ malI ← transcriptional repressor of Mal regulon
RA 1,701,108 A→T 7.1% N51I (AAT→ATT)  malY → PLP‑dependent beta‑cystathionase and maltose regulon regulator
RA 1,712,337 A→T 10.6% intergenic (+179/‑432) nth → / → dtpA DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A
RA 1,712,338 A→T 10.6% intergenic (+180/‑431) nth → / → dtpA DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A
RA 1,763,450 A→G 7.7% V187A (GTG→GCG) ‡ sufB ← component of SufBCD Fe‑S cluster assembly scaffold
RA 1,763,451 C→T 7.7% V187M (GTG→ATG) ‡ sufB ← component of SufBCD Fe‑S cluster assembly scaffold
RA 1,810,062 T→C 11.8% intergenic (+14/‑149) yniC → / → ydjM 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA
RA 1,810,065 T→G 13.3% intergenic (+17/‑146) yniC → / → ydjM 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA
RA 1,810,066 C→A 13.4% intergenic (+18/‑145) yniC → / → ydjM 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA
RA 1,810,069 G→A 13.3% intergenic (+21/‑142) yniC → / → ydjM 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA
RA 1,836,136 G→C 11.1% D22H (GAC→CAC)  ynjB → putative ABC transporter periplasmic binding protein
RA 1,842,308 G→A 6.5% intergenic (‑173/‑63) ynjH ← / → gdhA DUF1496 family protein/glutamate dehydrogenase, NADP‑specific
RA 1,856,333 T→G 12.2% E199A (GAG→GCG) ‡ ydjH ← putative kinase
RA 1,856,334 C→A 11.1% E199* (GAG→TAG) ‡ ydjH ← putative kinase
RA 1,864,758 G→A 28.6% intergenic (+24/+24) yeaD → / ← yeaE D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent
RA 1,864,763 A→T 33.3% intergenic (+29/+19) yeaD → / ← yeaE D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent
RA 1,865,682 G→C 9.6% intergenic (‑46/+44) yeaE ← / ← mipA aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent/scaffolding protein for murein synthesizing machinery
RA 1,890,943 T→C 100% T109A (ACC→GCC)  tsaB ← tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD
RA 1,913,763 C→T 6.1% V352I (GTC→ATC)  prc ← carboxy‑terminal protease for penicillin‑binding protein 3
RA 1,916,756 A→G 5.8% I167V (ATC→GTC)  yebS → inner membrane PqiA domain protein
MC JC 1,978,503 Δ776 bp 100% insB1insA insB1, insA
RA 1,987,857 C→T 10.2% intergenic (‑99/+16) yecJ ← / ← azuC DUF2766 family protein/acid‑inducible small membrane‑associated protein
RA 1,987,858 G→C 14.3% intergenic (‑100/+15) yecJ ← / ← azuC DUF2766 family protein/acid‑inducible small membrane‑associated protein
RA 1,987,859 G→C 10.2% intergenic (‑101/+14) yecJ ← / ← azuC DUF2766 family protein/acid‑inducible small membrane‑associated protein
RA 1,987,860 A→G 10.5% intergenic (‑102/+13) yecJ ← / ← azuC DUF2766 family protein/acid‑inducible small membrane‑associated protein
RA 2,009,731 A→G 12.2% intergenic (+19/‑90) yedF → / → yedK putative TusA family sulfurtransferase/DUF159 family protein
RA 2,009,732 C→G 11.9% intergenic (+20/‑89) yedF → / → yedK putative TusA family sulfurtransferase/DUF159 family protein
RA 2,009,733 C→T 11.9% intergenic (+21/‑88) yedF → / → yedK putative TusA family sulfurtransferase/DUF159 family protein
RA 2,052,380 C→T 5.2% pseudogene (949/1053 nt) yeeL ← pseudogene, glycosyltransferase homology
RA 2,081,688 A→T 9.5% I287N (ATT→AAT)  dacD ← D‑alanyl‑D‑alanine carboxypeptidase; penicillin‑binding protein 6b
RA 2,117,893 T→C 6.6% N171S (AAC→AGC)  wcaK ← colanic acid biosynthesis protein
RA 2,121,583 Δ1 bp 5.6% intergenic (‑29/+26) wcaJ ← / ← cpsG colanic biosynthesis UDP‑glucose lipid carrier transferase/phosphomannomutase
RA 2,121,586 G→C 5.6% intergenic (‑32/+23) wcaJ ← / ← cpsG colanic biosynthesis UDP‑glucose lipid carrier transferase/phosphomannomutase
RA 2,121,588:1 +C 6.0% intergenic (‑34/+21) wcaJ ← / ← cpsG colanic biosynthesis UDP‑glucose lipid carrier transferase/phosphomannomutase
RA 2,140,400 G→A 5.8% R405W (CGG→TGG)  asmA ← suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane‑anchored periplasmic protein
RA 2,170,119 T→C 6.5% pseudogene (49/475 nt) gatR ← pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted
RA 2,173,361 Δ2 bp 100% pseudogene (1‑2/442 nt) gatC ← pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC
RA 2,180,043 C→T 100% T408M (ACG→ATG)  yegT → nucleoside transporter, low affinity
RA 2,229,322 C→G 11.6% intergenic (+257/+116) yohP → / ← dusC uncharacterized protein/tRNA‑dihydrouridine synthase C
RA 2,229,323 C→G 11.6% intergenic (+258/+115) yohP → / ← dusC uncharacterized protein/tRNA‑dihydrouridine synthase C
RA 2,297,451 T→A 9.8% Q65L (CAG→CTG)  ccmA ← heme export ABC transporter ATPase
RA 2,314,800 A→C 21.4% Q438P (CAG→CCG) ‡ rcsD → phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
RA 2,314,801 G→T 21.8% Q438H (CAG→CAT) ‡ rcsD → phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
RA 2,324,650 T→C 6.0% M181T (ATG→ACG)  atoA → acetyl‑CoA:acetoacetyl‑CoA transferase, beta subunit
RA 2,375,483 A→T 10.0% L160L (CTT→CTA) ‡ menC ← O‑succinylbenzoyl‑CoA synthase
RA 2,375,484 A→T 9.9% L160H (CTT→CAT) ‡ menC ← O‑succinylbenzoyl‑CoA synthase
RA 2,386,694 G→A 5.6% A279T (GCC→ACC)  yfbL → putative M28A family peptidase
RA 2,391,414 C→G 9.5% R31P (CGA→CCA)  nuoN ← NADH:ubiquinone oxidoreductase, membrane subunit N
RA 2,391,417 C→G 9.5% W30S (TGG→TCG)  nuoN ← NADH:ubiquinone oxidoreductase, membrane subunit N
RA 2,400,684 T→A 5.4% Q291L (CAG→CTG)  nuoF ← NADH:ubiquinone oxidoreductase, chain F
RA 2,401,329 A→G 5.5% M76T (ATG→ACG)  nuoF ← NADH:ubiquinone oxidoreductase, chain F
RA 2,407,898 A→C 6.2% Q113P (CAG→CCG) ‡ alaA → glutamate‑pyruvate aminotransferase; glutamic‑pyruvic transaminase (GPT); alanine transaminase
RA 2,407,899 G→T 6.2% Q113H (CAG→CAT) ‡ alaA → glutamate‑pyruvate aminotransferase; glutamic‑pyruvic transaminase (GPT); alanine transaminase
RA 2,420,183 A→G 6.6% R101R (CGT→CGC yfcF ← glutathione S‑transferase
RA 2,420,186 C→T 6.8% A100A (GCG→GCA yfcF ← glutathione S‑transferase
RA 2,428,038 A→T 5.8% intergenic (‑247/+19) argT ← / ← ubiX lysine/arginine/ornithine transporter subunit/3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA 2,428,039 A→T 5.8% intergenic (‑248/+18) argT ← / ← ubiX lysine/arginine/ornithine transporter subunit/3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA 2,428,040 A→T 5.8% intergenic (‑249/+17) argT ← / ← ubiX lysine/arginine/ornithine transporter subunit/3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase
RA 2,428,697 A→G 8.6% intergenic (‑71/+24) ubiX ← / ← purF 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/amidophosphoribosyltransferase
RA 2,428,699 A→T 8.6% intergenic (‑73/+22) ubiX ← / ← purF 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/amidophosphoribosyltransferase
RA 2,428,701 C→T 8.4% intergenic (‑75/+20) ubiX ← / ← purF 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/amidophosphoribosyltransferase
RA 2,440,865 C→T 10.0% L247L (CTG→CTA) ‡ fabB ← 3‑oxoacyl‑[acyl‑carrier‑protein] synthase I
RA 2,440,866 A→G 9.7% L247P (CTG→CCG) ‡ fabB ← 3‑oxoacyl‑[acyl‑carrier‑protein] synthase I
RA 2,463,057 G→T 10.5% E16* (GAA→TAA)  yfdF → uncharacterized protein
RA 2,518,082 C→G 11.3% noncoding (35/76 nt) alaX ← tRNA‑Ala
RA 2,571,172 T→C 8.0% N194D (AAT→GAT)  eutE ← aldehyde oxidoreductase, ethanolamine utilization protein
RA 2,589,122 G→A 5.9% G510S (GGC→AGC)  acrD → aminoglycoside/multidrug efflux system
RA 2,589,125 T→C 6.3% F511L (TTT→CTT)  acrD → aminoglycoside/multidrug efflux system
RA 2,653,367 G→A 13.3% intergenic (+28/‑488) sseA → / → ryfA 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown
RA 2,653,372 T→C 13.3% intergenic (+33/‑483) sseA → / → ryfA 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown
RA 2,683,209 C→T 9.1% P116L (CCG→CTG)  yphH → putative DNA‑binding transcriptional regulator
RA 2,691,169 A→T 9.9% noncoding (172/184 nt) glmY ← sRNA activator of glmS mRNA, glmZ processing antagonist
RA 2,691,171 T→A 10.2% noncoding (170/184 nt) glmY ← sRNA activator of glmS mRNA, glmZ processing antagonist
RA 2,691,173 A→T 10.4% noncoding (168/184 nt) glmY ← sRNA activator of glmS mRNA, glmZ processing antagonist
RA 2,705,868 A→T 6.5% I419I (ATT→ATA lepA ← back‑translocating elongation factor EF4, GTPase
RA 2,705,871 A→T 6.6% V418V (GTT→GTA lepA ← back‑translocating elongation factor EF4, GTPase
RA 2,713,371 C→T 6.8% A159V (GCA→GTA)  srmB → ATP‑dependent RNA helicase
RA 2,717,169 T→G 5.6% L139R (CTC→CGC) ‡ ung → uracil‑DNA‑glycosylase
RA 2,717,170 C→A 5.6% L139L (CTC→CTA) ‡ ung → uracil‑DNA‑glycosylase
RA 2,724,095 C→A 7.1% intergenic (+13/‑33) pssA → / → yfiM phosphatidylserine synthase; CDP‑diacylglycerol‑serine O‑phosphatidyltransferase/putative lipoprotein
RA 2,724,097 T→A 7.0% intergenic (+15/‑31) pssA → / → yfiM phosphatidylserine synthase; CDP‑diacylglycerol‑serine O‑phosphatidyltransferase/putative lipoprotein
RA 2,724,099 T→G 6.9% intergenic (+17/‑29) pssA → / → yfiM phosphatidylserine synthase; CDP‑diacylglycerol‑serine O‑phosphatidyltransferase/putative lipoprotein
RA 2,761,620 T→G 8.1% K641Q (AAG→CAG)  yfjK ← radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage
RA 2,761,623 C→A 7.8% V640L (GTA→TTA)  yfjK ← radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage
RA 2,768,609 T→C 11.6% intergenic (+36/‑56) yfjP → / → yfjQ CP4‑57 prophage; 50S ribosome‑binding GTPase family protein/CP4‑57 prophage; uncharacterized protein
RA 2,768,614 A→C 11.3% intergenic (+41/‑51) yfjP → / → yfjQ CP4‑57 prophage; 50S ribosome‑binding GTPase family protein/CP4‑57 prophage; uncharacterized protein
RA 2,768,615 G→T 12.5% intergenic (+42/‑50) yfjP → / → yfjQ CP4‑57 prophage; 50S ribosome‑binding GTPase family protein/CP4‑57 prophage; uncharacterized protein
RA 2,791,738 Δ1 bp 10.2% coding (466/1449 nt) gabD → succinate‑semialdehyde dehydrogenase I, NADP‑dependent
RA 2,791,743 C→G 10.5% N157K (AAC→AAG gabD → succinate‑semialdehyde dehydrogenase I, NADP‑dependent
RA 2,791,747:1 +A 10.2% coding (475/1449 nt) gabD → succinate‑semialdehyde dehydrogenase I, NADP‑dependent
RA 2,801,056 A→T 9.2% N31I (AAT→ATT)  nrdI → NrdEF cluster assembly flavodoxin
RA 2,810,872 C→T 5.4% H35Y (CAC→TAC) ‡ mprA → transcriptional repressor of microcin B17 synthesis and multidrug efflux
RA 2,810,873 A→G 5.4% H35R (CAC→CGC) ‡ mprA → transcriptional repressor of microcin B17 synthesis and multidrug efflux
RA 2,814,174 T→A 8.6% intergenic (+20/+44) emrB → / ← luxS multidrug efflux system protein/S‑ribosylhomocysteine lyase
RA 2,814,175 T→A 8.6% intergenic (+21/+43) emrB → / ← luxS multidrug efflux system protein/S‑ribosylhomocysteine lyase
RA 2,818,392 A→T 5.8% intergenic (‑118/+81) argY ← / ← argV tRNA‑Arg/tRNA‑Arg
RA 2,818,393 A→T 6.0% intergenic (‑119/+80) argY ← / ← argV tRNA‑Arg/tRNA‑Arg
RA 2,822,673 C→T 6.8% intergenic (‑34/+35) recX ← / ← recA regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor
RA 2,822,678 G→T 6.7% intergenic (‑39/+30) recX ← / ← recA regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor
RA 2,822,679 A→C 6.7% intergenic (‑40/+29) recX ← / ← recA regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor
RA 2,822,684 A→G 6.4% intergenic (‑45/+24) recX ← / ← recA regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor
RA 2,899,821 G→T 7.8% I151I (ATC→ATA ygcW ← putative SDR family oxidoreductase
RA 2,918,017 C→T 12.1% intergenic (+204/+28) barA → / ← gudD hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1
RA 2,918,019 G→T 11.6% intergenic (+206/+26) barA → / ← gudD hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1
RA 2,918,020 A→C 11.4% intergenic (+207/+25) barA → / ← gudD hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1
RA 2,918,022 A→G 11.1% intergenic (+209/+23) barA → / ← gudD hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1
RA 2,971,146 T→C 9.4% intergenic (+13/‑125) ygdQ → / → ygdR UPF0053 family inner membrane protein/DUF903 family verified lipoprotein
RA 2,971,151 T→C 9.4% intergenic (+18/‑120) ygdQ → / → ygdR UPF0053 family inner membrane protein/DUF903 family verified lipoprotein
RA 2,971,154 G→A 9.6% intergenic (+21/‑117) ygdQ → / → ygdR UPF0053 family inner membrane protein/DUF903 family verified lipoprotein
RA 3,001,626 G→A 6.4% G428S (GGC→AGC)  xdhA → xanthine dehydrogenase, molybdenum binding subunit
RA 3,020,510 G→T 12.7% intergenic (+21/‑30) ssnA → / → ygfM putative chlorohydrolase/aminohydrolase/putative oxidoreductase
RA 3,020,511 C→G 12.7% intergenic (+22/‑29) ssnA → / → ygfM putative chlorohydrolase/aminohydrolase/putative oxidoreductase
RA 3,020,512 A→C 13.8% intergenic (+23/‑28) ssnA → / → ygfM putative chlorohydrolase/aminohydrolase/putative oxidoreductase
RA 3,031,221 T→A 9.5% intergenic (‑290/‑146) ygfT ← / → uacT putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit/uric acid permease
RA 3,059,703 A→T 8.1% intergenic (‑2/‑50) yqfE ← / → argP pseudogene, LysR family/transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor
RA 3,059,704 A→T 8.0% intergenic (‑3/‑49) yqfE ← / → argP pseudogene, LysR family/transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor
RA 3,095,733 T→G 6.5% I212M (ATT→ATG yggS → UPF0001 family protein, PLP‑binding
RA 3,101,600 C→T 6.7% A8A (GCG→GCA) ‡ yggN ← DUF2884 family putative periplasmic protein
RA 3,101,602 C→G 6.5% A8P (GCG→CCG) ‡ yggN ← DUF2884 family putative periplasmic protein
RA 3,101,604 A→G 6.3% L7P (CTG→CCG)  yggN ← DUF2884 family putative periplasmic protein
RA 3,143,128 A→G 5.1% F346S (TTC→TCC)  hybB ← putative hydrogenase 2 cytochrome b type component
RA 3,156,590 C→A 8.1% intergenic (+72/‑33) yqhD → / → dkgA aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A
RA 3,156,591 T→G 8.3% intergenic (+73/‑32) yqhD → / → dkgA aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A
RA 3,175,546 T→A 5.0% Q154L (CAG→CTG)  yqiA ← acyl CoA esterase
RA 3,183,345:1 +T 13.0% intergenic (+22/+468) zupT → / ← ribB zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase
RA 3,183,350 Δ1 bp 11.8% intergenic (+27/+463) zupT → / ← ribB zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase
RA 3,206,671 C→A 5.7% A70D (GCC→GAC)  ttdA → L‑tartrate dehydratase, alpha subunit
RA 3,206,673 T→A 5.7% C71S (TGT→AGT) ‡ ttdA → L‑tartrate dehydratase, alpha subunit
RA 3,206,675 T→G 5.1% C71W (TGT→TGG) ‡ ttdA → L‑tartrate dehydratase, alpha subunit
RA 3,236,076 C→T 7.1% H39H (CAC→CAT ygjP → putative metal dependent hydrolase
RA 3,256,450 C→T 6.0% V68I (GTT→ATT)  yhaM ← putative L‑serine dehydratase alpha chain
RA 3,324,952 A→G 7.2% intergenic (‑41/+49) folP ← / ← ftsH 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo
RA 3,324,955 A→G 5.8% intergenic (‑44/+46) folP ← / ← ftsH 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo
RA 3,324,956 C→T 5.9% intergenic (‑45/+45) folP ← / ← ftsH 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo
RA 3,324,959 C→T 5.7% intergenic (‑48/+42) folP ← / ← ftsH 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo
RA 3,333,753 C→T 5.4% A15V (GCG→GTG)  ispB → octaprenyl diphosphate synthase
RA 3,354,537 C→G 6.3% intergenic (‑487/‑188) yhcC ← / → gltB putative Fe‑S oxidoreductase, Radical SAM superfamily protein/glutamate synthase, large subunit
RA 3,471,361 T→G 7.9% intergenic (‑32/+39) tufA ← / ← fusA translation elongation factor EF‑Tu 1/protein chain elongation factor EF‑G, GTP‑binding
RA 3,471,362 C→A 7.9% intergenic (‑33/+38) tufA ← / ← fusA translation elongation factor EF‑Tu 1/protein chain elongation factor EF‑G, GTP‑binding
RA 3,471,366 A→G 8.6% intergenic (‑37/+34) tufA ← / ← fusA translation elongation factor EF‑Tu 1/protein chain elongation factor EF‑G, GTP‑binding
RA 3,533,039 T→G 5.9% R74R (CGT→CGG pck → phosphoenolpyruvate carboxykinase [ATP]
RA 3,560,455:1 +G 100% intergenic (‑2/+1) glpR ← / ← glpR pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon
RA 3,561,969 A→T 7.4% intergenic (‑146/‑44) glpE ← / → glpD thiosulfate:cyanide sulfurtransferase (rhodanese)/sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding
RA 3,561,972 A→T 7.4% intergenic (‑149/‑41) glpE ← / → glpD thiosulfate:cyanide sulfurtransferase (rhodanese)/sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding
RA 3,642,358 T→A 8.9% intergenic (+27/+22) dtpB → / ← rsmJ dipeptide and tripeptide permease B/16S rRNA m(2)G1516 methyltransferase, SAM‑dependent
RA 3,642,361 T→A 9.1% intergenic (+30/+19) dtpB → / ← rsmJ dipeptide and tripeptide permease B/16S rRNA m(2)G1516 methyltransferase, SAM‑dependent
RA 3,657,599 T→A 14.7% intergenic (+32/+387) hdeD → / ← arrS acid‑resistance membrane protein/antisense sRNA ArrS, function unknown
RA 3,657,601 G→C 14.5% intergenic (+34/+385) hdeD → / ← arrS acid‑resistance membrane protein/antisense sRNA ArrS, function unknown
RA 3,657,603 T→A 15.4% intergenic (+36/+383) hdeD → / ← arrS acid‑resistance membrane protein/antisense sRNA ArrS, function unknown
RA 3,676,271 A→T 8.7% intergenic (+163/+19) yhjE → / ← yhjG putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein
RA 3,697,969 C→G 5.7% H504Q (CAC→CAG bcsE → cellulose production protein
RA 3,702,835 G→A 5.5% L12L (CTG→TTG)  dppF ← dipeptide/heme ABC transporter ATPas
RA 3,702,837 G→C 5.7% P11R (CCG→CGG)  dppF ← dipeptide/heme ABC transporter ATPas
RA 3,702,839 T→C 6.3% Q10Q (CAA→CAG dppF ← dipeptide/heme ABC transporter ATPas
RA 3,714,163:1 +T 7.8% coding (2232/2334 nt) bisC ← biotin sulfoxide reductase
RA 3,714,168 Δ1 bp 7.6% coding (2227/2334 nt) bisC ← biotin sulfoxide reductase
RA 3,720,294 T→C 5.5% intergenic (+33/+154) cspA → / ← hokA RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small
RA 3,720,299 T→A 5.9% intergenic (+38/+149) cspA → / ← hokA RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small
RA 3,720,300 T→A 6.2% intergenic (+39/+148) cspA → / ← hokA RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small
RA 3,720,305 G→A 6.2% intergenic (+44/+143) cspA → / ← hokA RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small
RA 3,722,300 G→T 10.3% intergenic (+195/+28) sokA → / ← glyS pseudogene, sRNA antisense regulator blocking mokA/hokA translation/glycine tRNA synthetase, beta subunit
RA 3,722,301 A→C 10.3% intergenic (+196/+27) sokA → / ← glyS pseudogene, sRNA antisense regulator blocking mokA/hokA translation/glycine tRNA synthetase, beta subunit
RA 3,729,408 C→G 5.4% intergenic (‑37/+35) xylB ← / ← xylA xylulokinase/D‑xylose isomerase
RA 3,736,322 G→T 7.1% intergenic (+165/+31) xylR → / ← bax xylose divergent operon transcriptional activator/putative glucosaminidase
RA 3,736,323 A→G 7.5% intergenic (+166/+30) xylR → / ← bax xylose divergent operon transcriptional activator/putative glucosaminidase
RA 3,736,324 C→T 7.3% intergenic (+167/+29) xylR → / ← bax xylose divergent operon transcriptional activator/putative glucosaminidase
RA 3,736,325 A→C 7.8% intergenic (+168/+28) xylR → / ← bax xylose divergent operon transcriptional activator/putative glucosaminidase
RA 3,781,051 C→G 10.0% intergenic (+34/‑164) lldD → / → trmL L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
RA 3,798,234 A→T 7.6% intergenic (+27/+5) waaL → / ← waaU O‑antigen ligase/lipopolysaccharide core biosynthesis
RA 3,798,235 A→T 7.5% intergenic (+28/+4) waaL → / ← waaU O‑antigen ligase/lipopolysaccharide core biosynthesis
RA 3,817,940 T→A 5.2% F61I (TTC→ATC)  dinD → DNA damage‑inducible protein
RA 3,817,948 G→T 5.8% E63D (GAG→GAT dinD → DNA damage‑inducible protein
RA 3,817,949 A→C 6.0% I64L (ATC→CTC)  dinD → DNA damage‑inducible protein
RA 3,832,188 A→T 5.4% intergenic (+22/+31) yicH → / ← yicI putative inner membrane‑anchored periplasmic AsmA family protein/putative alpha‑glucosidase
RA 3,888,212 Δ1 bp 8.0% intergenic (+20/‑223) mnmE → / → tnaC tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide
RA 3,888,219 T→A 8.5% intergenic (+27/‑216) mnmE → / → tnaC tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide
RA 3,891,502 C→G 21.0% intergenic (+19/‑113) tnaB → / → mdtL tryptophan transporter of low affinity/multidrug efflux system protein
RA 3,891,504 T→A 21.7% intergenic (+21/‑111) tnaB → / → mdtL tryptophan transporter of low affinity/multidrug efflux system protein
RA 3,891,506 C→G 19.0% intergenic (+23/‑109) tnaB → / → mdtL tryptophan transporter of low affinity/multidrug efflux system protein
RA 3,897,613 G→A 7.5% P36P (CCG→CCA cbrB → PRK09823 family inner membrane protein, creBC regulon
RA 3,897,614 C→G 7.5% L37V (CTG→GTG) ‡ cbrB → PRK09823 family inner membrane protein, creBC regulon
RA 3,897,615 T→C 7.6% L37P (CTG→CCG) ‡ cbrB → PRK09823 family inner membrane protein, creBC regulon
RA 3,908,512 A→C 5.1% intergenic (‑146/+37) pstB ← / ← pstA phosphate ABC transporter ATPase/phosphate ABC transporter permease
RA 3,915,373 C→T 8.3% intergenic (‑173/+180) glmU ← / ← atpC fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
RA 3,915,375 G→C 8.3% intergenic (‑175/+178) glmU ← / ← atpC fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
RA 3,915,377 A→G 8.3% intergenic (‑177/+176) glmU ← / ← atpC fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
RA 3,915,428 A→G 6.1% intergenic (‑228/+125) glmU ← / ← atpC fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit
RA 3,959,480 A→T 15.0% intergenic (+35/+52) ilvC → / ← ppiC ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)
RA 3,959,481 C→G 15.0% intergenic (+36/+51) ilvC → / ← ppiC ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)
RA 3,959,924 A→T 10.9% intergenic (‑111/+88) ppiC ← / ← yifN peptidyl‑prolyl cis‑trans isomerase C (rotamase C)/PemK toxin family pseudogene
RA 3,959,925 A→T 10.9% intergenic (‑112/+87) ppiC ← / ← yifN peptidyl‑prolyl cis‑trans isomerase C (rotamase C)/PemK toxin family pseudogene
RA 3,959,926 A→T 10.9% intergenic (‑113/+86) ppiC ← / ← yifN peptidyl‑prolyl cis‑trans isomerase C (rotamase C)/PemK toxin family pseudogene
RA 3,970,813 Δ1 bp 7.8% coding (681/1131 nt) wecB → UDP‑N‑acetyl glucosamine‑2‑epimerase
RA 3,970,817:1 +G 8.0% coding (685/1131 nt) wecB → UDP‑N‑acetyl glucosamine‑2‑epimerase
RA 3,971,996 T→A 6.9% L246Q (CTG→CAG)  wecC → UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase
RA 3,972,673 A→C 8.3% E51A (GAG→GCG) ‡ rffG → dTDP‑glucose 4,6‑dehydratase
RA 3,972,674 G→T 8.3% E51D (GAG→GAT) ‡ rffG → dTDP‑glucose 4,6‑dehydratase
RA 4,009,002 G→T 6.5% P20T (CCA→ACA)  rhtB ← homoserine, homoserine lactone and S‑methyl‑methionine efflux pump
RA 4,041,216 T→C 10.4% Q73R (CAG→CGG) ‡ mobB ← molybdopterin‑guanine dinucleotide biosynthesis protein B
RA 4,041,217 G→A 10.4% Q73* (CAG→TAG) ‡ mobB ← molybdopterin‑guanine dinucleotide biosynthesis protein B
RA 4,041,220 T→C 10.4% S72G (AGC→GGC)  mobB ← molybdopterin‑guanine dinucleotide biosynthesis protein B
RA 4,041,221 G→A 10.4% A71A (GCC→GCT mobB ← molybdopterin‑guanine dinucleotide biosynthesis protein B
RA 4,049,986 G→T 30.2% noncoding (88/109 nt) spf → Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
RA 4,049,989 A→C 29.2% noncoding (91/109 nt) spf → Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
RA 4,056,039 C→A 5.0% D101Y (GAC→TAC)  glnL ← sensory histidine kinase in two‑component regulatory system with GlnG
RA 4,060,261 G→T 10.9% intergenic (+31/‑186) typA → / → yihL GTP‑binding protein/putative DNA‑binding transcriptional regulator
RA 4,060,264 A→C 10.9% intergenic (+34/‑183) typA → / → yihL GTP‑binding protein/putative DNA‑binding transcriptional regulator
RA 4,080,024 G→C 6.0% intergenic (+55/+275) yiiF → / ← fdhE putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein
RA 4,080,616 C→A 6.6% G205C (GGC→TGC)  fdhE ← formate dehydrogenase formation protein
RA 4,080,621 T→G 6.5% Q203P (CAA→CCA)  fdhE ← formate dehydrogenase formation protein
RA 4,114,465 T→C 6.2% D3G (GAT→GGT)  fpr ← ferredoxin‑NADP reductase; flavodoxin reductase
RA 4,121,959 T→G 7.4% N110T (AAC→ACC)  hslV ← peptidase component of the HslUV protease
RA 4,121,962 C→A 6.3% G109V (GGT→GTT)  hslV ← peptidase component of the HslUV protease
RA 4,223,854 T→C 5.2% R9R (CGT→CGC metH → homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA 4,223,855 G→A 5.2% A10T (GCG→ACG)  metH → homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
RA 4,227,550 G→A 6.5% intergenic (+39/‑181) metH → / → yjbB homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter
RA 4,227,555 A→T 5.4% intergenic (+44/‑176) metH → / → yjbB homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter
RA 4,227,560 T→C 7.1% intergenic (+49/‑171) metH → / → yjbB homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter
RA 4,236,226 T→C 5.3% intergenic (+78/‑36) yjbE → / → yjbF extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein
RA 4,236,229 G→A 5.2% intergenic (+81/‑33) yjbE → / → yjbF extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein
RA 4,245,108 T→G 7.7% intergenic (‑33/+121) malF ← / ← malE maltose transporter subunit/maltose transporter subunit
RA 4,245,110 T→G 7.7% intergenic (‑35/+119) malF ← / ← malE maltose transporter subunit/maltose transporter subunit
RA 4,245,111 C→A 7.5% intergenic (‑36/+118) malF ← / ← malE maltose transporter subunit/maltose transporter subunit
RA 4,245,113 C→A 7.6% intergenic (‑38/+116) malF ← / ← malE maltose transporter subunit/maltose transporter subunit
RA 4,262,250 G→C 7.7% G194G (GGG→GGC dusA → tRNA‑dihydrouridine synthase A
RA 4,262,255 G→C 7.2% S196T (AGC→ACC)  dusA → tRNA‑dihydrouridine synthase A
RA 4,262,902 G→A 8.2% L21L (TTG→TTA pspG → phage shock protein G
RA 4,291,512 G→A 6.6% M1M (GTG→ATG) †‡ nrfE → heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE
RA 4,291,513 T→C 6.6% M1A (GTG→GCG) †‡ nrfE → heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE
RA 4,296,060 C→T 24.2% intergenic (+266/+376) gltP → / ← yjcO glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
RA 4,296,380:1 +CG 100% intergenic (+586/+56) gltP → / ← yjcO glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
RA 4,314,227 A→T 11.5% intergenic (+30/+117) yjdP → / ← phnP putative periplasmic protein/5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase
RA 4,314,233 A→T 12.1% intergenic (+36/+111) yjdP → / ← phnP putative periplasmic protein/5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase
RA 4,316,831 C→T 6.1% E130K (GAG→AAG)  phnM ← ribophosphonate triphosphate hydrolase
RA 4,328,452 C→T 5.3% R440C (CGT→TGT)  crfC → clamp‑binding sister replication fork colocalization protein, dynamin‑related
RA 4,335,654 T→A 18.5% intergenic (‑64/+40) eptA ← / ← adiC lipid A phosphoethanolamine transferase/arginine:agmatine antiporter
RA 4,335,655 T→A 18.4% intergenic (‑65/+39) eptA ← / ← adiC lipid A phosphoethanolamine transferase/arginine:agmatine antiporter
RA 4,347,285 C→G 12.5% M14I (ATG→ATC fumB ← anaerobic class I fumarate hydratase (fumarase B)
RA 4,347,288 C→G 11.3% P13P (CCG→CCC fumB ← anaerobic class I fumarate hydratase (fumarase B)
RA 4,366,854 T→G 33.3% intergenic (‑81/+37) dcuA ← / ← aspA C4‑dicarboxylate antiporter/aspartate ammonia‑lyase
RA 4,366,855 C→A 38.5% intergenic (‑82/+36) dcuA ← / ← aspA C4‑dicarboxylate antiporter/aspartate ammonia‑lyase
RA 4,395,454 T→C 7.5% C463C (TGT→TGC nnr → bifunctional NAD(P)H‑hydrate repair enzyme; C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase
RA 4,395,455 G→A 7.5% A464T (GCA→ACA)  nnr → bifunctional NAD(P)H‑hydrate repair enzyme; C‑terminal domain ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase and N‑terminal domain NAD(P)H‑hydrate epimerase
RA 4,462,345 C→G 5.9% V106L (GTC→CTC)  nrdD ← anaerobic ribonucleoside‑triphosphate reductase
RA 4,472,434 G→A 12.3% R34* (CGA→TGA)  pyrL ← pyrBI operon leader peptide
RA 4,472,437 T→C 12.9% N33D (AAT→GAT)  pyrL ← pyrBI operon leader peptide
RA 4,479,012 A→T 11.5% intergenic (+123/+22) rraB → / ← yjgM protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase
RA 4,479,016 G→C 12.5% intergenic (+127/+18) rraB → / ← yjgM protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase
RA 4,479,020 A→T 13.0% intergenic (+131/+14) rraB → / ← yjgM protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase
RA 4,512,350:1 +G 6.2% coding (65/957 nt) fecD ← ferric citrate ABC transporter permease
RA 4,517,511 G→C 8.3% S69R (AGC→AGG fecR ← anti‑sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA‑bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator
RA 4,549,932 T→A 6.3% intergenic (+222/+21) fimH → / ← gntP minor component of type 1 fimbriae/fructuronate transporter
RA 4,551,422 T→A 6.0% intergenic (‑126/‑214) gntP ← / → uxuA fructuronate transporter/mannonate hydrolase
RA 4,552,182 G→C 6.7% G183R (GGC→CGC)  uxuA → mannonate hydrolase
RA 4,552,185 G→C 6.7% A184P (GCG→CCG)  uxuA → mannonate hydrolase
RA 4,552,833 T→C 10.7% intergenic (+13/‑68) uxuA → / → uxuB mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent
RA 4,552,837 Δ1 bp 10.8% intergenic (+17/‑64) uxuA → / → uxuB mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent
RA 4,552,841:1 +A 10.8% intergenic (+21/‑60) uxuA → / → uxuB mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent
RA 4,552,845 G→A 10.5% intergenic (+25/‑56) uxuA → / → uxuB mannonate hydrolase/D‑mannonate oxidoreductase, NAD‑dependent
RA 4,556,244 T→C 5.7% D26G (GAC→GGC)  yjiC ← uncharacterized protein

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 729342 729470 129 15 [13] [13] 14 ybfA/rhsC DUF2517 family protein/Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
* * ÷ NC_000913 3476511 3476636 126 14 [13] [13] 14 [fkpA] [fkpA]

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)6 (0.090) 5/250 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 = 228108NA (NA)9 (0.140) 7/250 NT NA noncoding (2350/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 228124 NA (NA)noncoding (2366/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
* ? NC_000913 274620 =NA (NA)5 (0.080) 3/240 NT NA noncoding (530/1195 nt) IS5 repeat region
?NC_000913 274663 = NA (NA)noncoding (487/1195 nt) IS5 repeat region
* ? NC_000913 1207790 =9 (0.140)45 (0.770) 36/226 NT 86.6% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 6 (0.100)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
* ? NC_000913 = 12078059 (0.140)31 (0.530) 26/226 NT 81.7% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 6 (0.100)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
* ? NC_000913 = 12994980 (0.000)33 (0.510) 31/250 NT 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
* ? NC_000913 = 142347553 (0.800)4 (0.060) 4/248 NT 7.0% pseudogene (275/444 nt)
coding (76/186 nt)
rzpR
rzoR
pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS
Rac prophage; putative lipoprotein
?NC_000913 = 1423537 56 (0.880)pseudogene (337/444 nt)
coding (138/186 nt)
rzpR
rzoR
pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS
Rac prophage; putative lipoprotein
* ? NC_000913 2150911 =27 (0.410)4 (0.060) 4/248 NT 14.0% coding (75/1947 nt) yegI protein kinase‑related putative non‑specific DNA‑binding protein
?NC_000913 2150944 = 23 (0.360)coding (42/1947 nt) yegI protein kinase‑related putative non‑specific DNA‑binding protein
* ? NC_000913 2304697 =9 (0.140)8 (0.130) 7/244 NT 23.7% noncoding (281/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 4027550 = 43 (0.680)noncoding (229/281 nt) REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
* ? NC_000913 2692268 =68 (1.020)4 (0.060) 4/250 NT 5.8% coding (3276/3888 nt) purL phosphoribosylformyl‑glycineamide synthetase
?NC_000913 2692316 = 63 (0.980)coding (3228/3888 nt) purL phosphoribosylformyl‑glycineamide synthetase
* ? NC_000913 2726200 =NA (NA)25 (0.390) 7/246 NT NA intergenic (‑12/+81) rrfG/rrlG 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon
?NC_000913 2726224 = NA (NA)intergenic (‑36/+57) rrfG/rrlG 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon
* ? NC_000913 3712860 =61 (0.920)80 (1.200) 58/258 NT 56.3% coding (75/699 nt) yhjY autotransporter beta‑domain protein
?NC_000913 = 3873341 63 (0.950)coding (272/618 nt) dgoA 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase
* ? NC_000913 = 398661437 (0.560)6 (0.100) 5/236 NT 13.8% noncoding (183/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent
?NC_000913 = 3986622 41 (0.670)noncoding (191/207 nt) glmZ sRNA antisense activator of glmS mRNA, Hfq‑dependent
* ? NC_000913 = 419187753 (0.800)3 (0.050) 3/248 NT 5.6% coding (759/771 nt) thiG thiamine biosynthesis ThiGH complex subunit
?NC_000913 = 4191903 50 (0.780)coding (733/771 nt) thiG thiamine biosynthesis ThiGH complex subunit
* ? NC_000913 = 444640777 (1.160)4 (0.060) 4/246 NT 5.2% coding (2296/3780 nt) tamB translocation and assembly module for autotransporter export, inner membrane subunit
?NC_000913 = 4446433 71 (1.120)coding (2322/3780 nt) tamB translocation and assembly module for autotransporter export, inner membrane subunit
* ? NC_000913 4468200 =50 (0.750)3 (0.050) 3/244 NT 5.6% coding (576/2697 nt) mgtA magnesium transporter
?NC_000913 4468238 = 54 (0.860)coding (614/2697 nt) mgtA magnesium transporter
* ? NC_000913 = 453413983 (1.250)4 (0.070) 4/238 NT 5.0% intergenic (‑86/+291) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
?NC_000913 = 4534160 74 (1.210)intergenic (‑107/+270) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment