mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 11,649 | A→G | 13.8% | S183G (AGC→GGC) | dnaN → | DNA polymerase III subunit beta |
| RA | 26,844 | A→T | 10.5% | intergenic (+40/+145) | PP_0021 → / ← PP_0022 | hypothetical protein/hypothetical protein |
| RA | 43,457 | Δ1 bp | 22.2% | intergenic (+23/+70) | PP_0040 → / ← cadA‑I | hypothetical protein/cadmium translocating P‑type ATPase |
| RA | 43,461:1 | +A | 25.0% | intergenic (+27/+66) | PP_0040 → / ← cadA‑I | hypothetical protein/cadmium translocating P‑type ATPase |
| RA | 45,680 | C→G | 9.3% | intergenic (‑156/+47) | cadA‑I ← / ← PP_0042 | cadmium translocating P‑type ATPase/hypothetical protein |
| RA | 162,281 | A→T | 8.5% | intergenic (‑315/+59) | PP_0153 ← / ← scpC | hypothetical protein/propionyl‑CoA:succinate CoA transferase |
| RA | 162,282 | A→T | 8.5% | intergenic (‑316/+58) | PP_0153 ← / ← scpC | hypothetical protein/propionyl‑CoA:succinate CoA transferase |
| RA | 195,559 | C→A | 12.7% | T355T (ACC→ACA) | PP_0168 → | putative surface adhesion protein |
| RA | 195,634 | C→T | 23.5% | T380T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 196,306 | T→C | 38.4% | N604N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,327 | A→C | 39.5% | T611T (ACA→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,351 | C→G | 46.8% | T619T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| RA | 196,390 | T→C | 31.9% | D632D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,089 | T→C | 8.8% | N865N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,179 | A→G | 8.6% | V895V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
| RA | 197,572 | G→A | 17.0% | K1026K (AAG→AAA) | PP_0168 → | putative surface adhesion protein |
| RA | 197,590 | T→C | 15.3% | D1032D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,632 | T→C | 14.0% | T1046T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,695 | G→C | 21.0% | T1067T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 274,785 | T→G | 30.4% | D388A (GAC→GCC) | PP_0222 ← | DszA family monooxygenase |
| RA | 274,788 | A→T | 30.2% | L387Q (CTG→CAG) | PP_0222 ← | DszA family monooxygenase |
| RA | 274,791 | C→A | 28.7% | G386V (GGC→GTC) | PP_0222 ← | DszA family monooxygenase |
| RA | 311,569 | G→T | 12.5% | P270H (CCC→CAC) | PP_0256 ← | putative oxidoreductase |
| RA | 322,135 | G→A | 25.0% | intergenic (+420/+38) | aguA → / ← PP_0267 | agmatine deiminase/ferric siderophore receptor |
| RA | 322,142 | T→C | 23.1% | intergenic (+427/+31) | aguA → / ← PP_0267 | agmatine deiminase/ferric siderophore receptor |
| RA | 327,553 | T→C | 10.0% | Y61C (TAC→TGC) | PP_0269 ← | glutamate synthase large subunit |
| RA | 417,378 | A→G | 8.7% | Q362R (CAG→CGG) | waaG → | lipopolysaccharide glucosyltransferase I |
| RA | 471,069 | T→C | 10.2% | intergenic (‑110/+18) | PP_0386 ← / ← rpoD | sensory box protein/RNA polymerase sigma 70 factor |
| RA | 503,828 | Δ1 bp | 11.4% | intergenic (+28/‑123) | PP_0414 → / → rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| RA | 503,834 | A→T | 11.1% | intergenic (+34/‑117) | PP_0414 → / → rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| RA | 503,835 | A→T | 11.1% | intergenic (+35/‑116) | PP_0414 → / → rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| RA | 503,840:1 | +C | 10.8% | intergenic (+40/‑111) | PP_0414 → / → rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| RA | 547,739 | G→A | 10.8% | D196N (GAC→AAC) | fusA → | elongation factor G 1 |
| RA | 550,760 | G→A | 50.0% | G33S (GGT→AGT) | rpsJ → | 30S ribosomal protein S10 |
| RA | 571,620 | G→A | 23.8% | intergenic (+43/+48) | ssb → / ← PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| RA | 571,621 | T→C | 23.5% | intergenic (+44/+47) | ssb → / ← PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| RA | 594,985 | G→A | 11.7% | A391V (GCT→GTT) | PP_0506 ← | ABC transporter permease |
| RA | 655,911 | G→T | 19.9% | S145R (AGC→AGA) | PP_0563 ← | two‑component system response regulator |
| RA | 699,725 | A→G | 46.9% | intergenic (+115/‑129) | PP_t06 → / → PP_23SD | tRNA‑Ala/23S ribosomal RNA |
| RA | 870,233 | G→T | 18.5% | R65S (CGC→AGC) | PP_5456 ← | hypothetical protein |
| RA | 947,116 | C→A | 22.2% | E86* (GAA→TAA) | norR ← | DNA‑binding transcriptional regulator |
| RA | 955,155 | T→A | 44.4% | intergenic (+106/‑207) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| RA | 1,070,265 | G→C | 36.4% | intergenic (+62/+82) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| RA | 1,070,268 | G→C | 36.2% | intergenic (+65/+79) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| RA | 1,089,810 | G→C | 10.6% | Q222H (CAG→CAC) | fumC‑I → | class 2 fumarate hydratase |
| RA | 1,089,816 | A→T | 10.2% | G224G (GGA→GGT) | fumC‑I → | class 2 fumarate hydratase |
| RA | 1,089,817 | A→T | 10.3% | T225S (ACC→TCC) | fumC‑I → | class 2 fumarate hydratase |
| RA | 1,089,823 | G→C | 10.3% | V227L (GTG→CTG) | fumC‑I → | class 2 fumarate hydratase |
| RA | 1,136,402 | C→A | 10.3% | L193F (TTG→TTT) | PP_0997 ← | sigma‑54 dependent transcriptional regulator/sensory box protein |
| RA | 1,140,732 | T→C | 17.4% | Q81R (CAG→CGG) | arcA ← | arginine deiminase |
| RA | 1,145,439 | C→T | 20.7% | intergenic (‑100/+41) | hemO ← / ← PP_1006 | heme oxygenase/heme receptor |
| RA | 1,145,446 | G→A | 20.7% | intergenic (‑107/+34) | hemO ← / ← PP_1006 | heme oxygenase/heme receptor |
| RA | 1,145,447 | T→C | 20.7% | intergenic (‑108/+33) | hemO ← / ← PP_1006 | heme oxygenase/heme receptor |
| RA | 1,145,454 | A→G | 20.7% | intergenic (‑115/+26) | hemO ← / ← PP_1006 | heme oxygenase/heme receptor |
| RA | 1,174,536 | G→C | 11.4% | P136P (CCG→CCC) | PP_1029 → | membrane protein |
| RA | 1,174,539 | G→C | 11.8% | M137I (ATG→ATC) | PP_1029 → | membrane protein |
| RA | 1,299,784 | G→A | 16.1% | Q134* (CAG→TAG) | PP_1134 ← | hypothetical protein |
| RA | 1,327,127 | C→T | 65.9% | intergenic (+97/‑196) | PP_16SE → / → PP_23SE | 16S ribosomal RNA/23S ribosomal RNA |
| RA | 1,388,541 | A→G | 12.9% | intergenic (‑46/‑236) | PP_1209 ← / → dps | cold‑shock protein/DNA‑binding stress protein |
| RA | 1,478,193 | C→A | 16.6% | G280G (GGC→GGA) | PP_1291 → | PhoH family protein |
| RA | 1,478,198 | C→G | 16.7% | A282G (GCC→GGC) | PP_1291 → | PhoH family protein |
| RA | 1,478,203 | T→G | 15.4% | S284A (TCC→GCC) | PP_1291 → | PhoH family protein |
| RA | 1,491,041 | Δ1 bp | 18.2% | coding (697/1902 nt) | cysNC → | sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase |
| RA | 1,491,045:1 | +C | 21.1% | coding (701/1902 nt) | cysNC → | sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase |
| RA | 1,506,932 | A→G | 33.2% | intergenic (+44/‑73) | petC → / → sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| RA | 1,506,936 | G→A | 44.4% | intergenic (+48/‑69) | petC → / → sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| RA | 1,506,939 | T→C | 50.0% | intergenic (+51/‑66) | petC → / → sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| RA | 1,506,943 | C→T | 49.7% | intergenic (+55/‑62) | petC → / → sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| RA | 1,558,546 | T→C | 14.3% | S133G (AGC→GGC) | PP_1369 ← | hypothetical protein |
| RA | 1,592,024 | C→A | 14.2% | intergenic (‑89/‑114) | PP_1395 ← / → PP_1396 | AraC family transcriptional regulator/hypothetical protein |
| RA | 1,592,029 | T→G | 13.5% | intergenic (‑94/‑109) | PP_1395 ← / → PP_1396 | AraC family transcriptional regulator/hypothetical protein |
| RA | 1,647,612 | G→A | 100% | D384D (GAC→GAT) | oprB‑II ← | carbohydrate‑selective porin |
| RA | 1,693,832 | C→A | 14.2% | R87S (CGC→AGC) | PP_1489 → | CheW domain‑containing protein |
| RA | 1,703,292 | G→C | 15.2% | intergenic (+99/‑68) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| RA | 1,703,294:1 | +T | 21.7% | intergenic (+101/‑66) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| RA | 1,812,002 | C→T | 10.2% | R153H (CGC→CAC) | PP_1615 ← | LysR family transcriptional regulator |
| RA | 1,851,242 | G→T | 100% | E96* (GAG→TAG) | relA → | ATP:GTP 3'‑pyrophosphotransferase |
| RA | 1,921,591 | T→A | 17.2% | intergenic (+24/+37) | PP_1720 → / ← PP_1721 | alcohol dehydrogenase/phosphoserine phosphatase |
| RA | 1,940,446 | G→T | 18.2% | Q292K (CAG→AAG) | PP_1740 ← | beta (1‑6) glucans synthase |
| RA | 2,080,393 | G→C | 23.7% | A340A (GCG→GCC) | earP → | EF‑P arginine 32 rhamnosyl‑transferase |
| RA | 2,188,361 | G→T | 22.2% | L70I (CTA→ATA) | PP_5491 ← | SEC‑C motif domain‑containing protein |
| RA | 2,216,535 | G→T | 21.9% | intergenic (+96/‑223) | PP_5493 → / → PP_5494 | hypothetical protein/hypothetical protein |
| RA | 2,273,105 | C→G | 22.3% | intergenic (+27/+264) | PP_2003 → / ← PP_2004 | hypothetical protein/AraC family transcriptional regulator |
| RA | 2,273,109 | A→T | 22.2% | intergenic (+31/+260) | PP_2003 → / ← PP_2004 | hypothetical protein/AraC family transcriptional regulator |
| RA | 2,273,113 | C→G | 25.1% | intergenic (+35/+256) | PP_2003 → / ← PP_2004 | hypothetical protein/AraC family transcriptional regulator |
| RA | 2,273,123 | C→T | 27.8% | intergenic (+45/+246) | PP_2003 → / ← PP_2004 | hypothetical protein/AraC family transcriptional regulator |
| RA | 2,420,641 | Δ1 bp | 15.4% | intergenic (+81/+26) | ctpH → / ← PP_t62 | methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro |
| RA | 2,420,645:1 | +T | 14.8% | intergenic (+85/+22) | ctpH → / ← PP_t62 | methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro |
| RA | 2,735,035 | G→A | 26.7% | T630T (ACG→ACA) | PP_2394 → | leucine‑rich repeat‑containing protein |
| RA | 2,900,038 | G→A | 23.5% | A212V (GCG→GTG) | PP_2553 ← | MFS transporter |
| RA | 2,982,931 | C→A | 21.0% | E97D (GAG→GAT) ‡ | PP_2608 ← | shikimate dehydrogenase family protein |
| RA | 2,982,932 | T→G | 23.5% | E97A (GAG→GCG) ‡ | PP_2608 ← | shikimate dehydrogenase family protein |
| RA | 2,994,670 | G→T | 19.1% | P213H (CCC→CAC) | PP_2618 ← | hypothetical protein |
| RA | 3,283,291 | C→T | 25.2% | C326Y (TGC→TAC) | PP_2885 ← | transporter |
| RA | 3,297,646 | C→A | 23.7% | intergenic (‑11/‑181) | PP_2900 ← / → pvdQ | hypothetical protein/acyl‑homoserine lactone acylase PvdQ |
| RA | 3,554,933 | A→C | 15.4% | K169T (AAA→ACA) | PP_3139 → | group 1 family glycosyl transferase |
| RA | 3,812,195 | C→G | 18.8% | P159R (CCG→CGG) | PP_3368 → | MFS transporter |
| RA | 3,934,036 | A→T | 18.2% | L474Q (CTG→CAG) | PP_3467 ← | sigma‑54 dependent transcriptional regulator |
| RA | 4,000,708 | G→A | 21.0% | A116T (GCC→ACC) | dmoA‑II → | dimethyl‑sulfide monooxygenase |
| RA | 4,042,052 | T→A | 15.5% | D32E (GAT→GAA) | PP_3563 → | hypothetical protein |
| RA | 4,082,784 | C→A | 23.8% | L229M (CTG→ATG) ‡ | PP_3592 → | RpiR family transcriptional regulator |
| RA | 4,082,785 | T→G | 22.8% | L229R (CTG→CGG) ‡ | PP_3592 → | RpiR family transcriptional regulator |
| RA | 4,278,913 | T→C | 12.1% | D23D (GAT→GAC) | PP_3750 → | GntR family transcriptional regulator |
| RA | 4,321,111 | A→G | 22.7% | intergenic (‑303/‑115) | PP_3791 ← / → PP_5629 | site‑specific recombinase/protease/amidase |
| RA | 4,321,114 | C→T | 21.8% | intergenic (‑306/‑112) | PP_3791 ← / → PP_5629 | site‑specific recombinase/protease/amidase |
| RA | 4,325,532 | G→A | 15.3% | intergenic (‑140/‑35) | PP_3795 ← / → pvdA | hypothetical protein/L‑ornithine 5‑monooxygenase |
| RA | 4,348,749 | A→G | 47.2% | intergenic (‑70/+404) | PP_3820 ← / ← galU | group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase |
| RA | 4,445,294 | C→G | 16.2% | G117A (GGG→GCG) ‡ | nicE ← | maleate isomerase |
| RA | 4,445,295 | C→G | 16.0% | G117R (GGG→CGG) ‡ | nicE ← | maleate isomerase |
| RA | 4,459,196 | C→T | 15.4% | A59A (GCC→GCT) | trkH‑I → | potassium transporter |
| RA | 4,530,069 | T→A | 14.3% | intergenic (+31/‑137) | PP_4018 → / → topB | acetyltransferase/DNA topoisomerase III |
| RA | 4,530,070 | T→A | 14.3% | intergenic (+32/‑136) | PP_4018 → / → topB | acetyltransferase/DNA topoisomerase III |
| RA | 4,570,581 | T→A | 15.4% | L134Q (CTG→CAG) | treY → | maltooligosyl trehalose synthase |
| RA | 4,570,584 | T→A | 15.4% | L135Q (CTG→CAG) | treY → | maltooligosyl trehalose synthase |
| RA | 4,741,273:1 | +C | 58.3% | intergenic (+464/+288) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,274 | A→C | 41.1% | intergenic (+465/+287) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,275 | A→G | 58.3% | intergenic (+466/+286) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,283 | C→G | 100% | intergenic (+474/+278) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,285 | 2 bp→CT | 100% | intergenic (+476/+275) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,298:1 | +T | 56.3% | intergenic (+489/+263) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,299 | C→T | 43.4% | intergenic (+490/+262) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,302 | A→G | 56.5% | intergenic (+493/+259) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,304 | C→G | 43.3% | intergenic (+495/+257) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,305 | Δ1 bp | 56.3% | intergenic (+496/+256) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,781,913 | G→T | 8.0% | R1816S (CGT→AGT) | pvdJ ← | non‑ribosomal peptide synthetase |
| RA | 4,783,733 | A→G | 13.3% | L1209P (CTG→CCG) | pvdJ ← | non‑ribosomal peptide synthetase |
| RA | 4,783,736 | C→T | 13.3% | R1208Q (CGG→CAG) | pvdJ ← | non‑ribosomal peptide synthetase |
| RA | 4,819,447 | G→T | 9.2% | H3930N (CAT→AAT) | pvdL ← | non‑ribosomal peptide synthetase |
| RA | 4,949,986 | C→G | 13.5% | G135R (GGC→CGC) | fliM ← | flagellar biosynthesis switching/energizing protein |
| RA | 4,949,989 | C→G | 14.0% | D134H (GAT→CAT) | fliM ← | flagellar biosynthesis switching/energizing protein |
| RA | 4,964,154 | Δ1 bp | 100% | coding (1249/1476 nt) | fleQ ← | transcriptional regulator FleQ |
| RA | 5,070,720 | G→T | 9.5% | P72Q (CCG→CAG) | PP_4466 ← | TauD/TfdA family dioxygenase |
| RA | 5,079,174 | T→A | 9.5% | intergenic (‑371/+26) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| RA | 5,079,177 | T→A | 9.5% | intergenic (‑374/+23) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| RA | 5,085,900 | T→C | 13.8% | Q36R (CAG→CGG) | PP_4476 ← | hypothetical protein |
| RA | 5,173,292 | T→C | 40.0% | intergenic (‑285/+47) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,173,295 | G→C | 40.2% | intergenic (‑288/+44) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,173,296 | G→C | 40.4% | intergenic (‑289/+43) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,173,299 | G→A | 40.0% | intergenic (‑292/+40) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,184,158 | A→C | 9.8% | M83L (ATG→CTG) | PP_4564 → | lipoprotein |
| RA | 5,184,165 | C→T | 9.7% | A85V (GCC→GTC) | PP_4564 → | lipoprotein |
| RA | 5,184,168 | A→G | 10.3% | D86G (GAC→GGC) | PP_4564 → | lipoprotein |
| RA | 5,191,879 | G→A | 12.1% | D96N (GAC→AAC) | PP_4572 → | hypothetical protein |
| RA | 5,299,972 | C→A | 11.4% | G60C (GGC→TGC) | recD ← | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| RA | 5,385,289 | C→T | 15.4% | intergenic (+34/‑29) | lldP → / → lldD | L‑lactate permease/L‑lactate dehydrogenase |
| RA | 5,458,940:1 | +A | 14.3% | intergenic (+17/‑45) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| RA | 5,458,946 | Δ1 bp | 13.3% | intergenic (+23/‑39) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| RA | 5,551,429 | T→C | 17.7% | F204L (TTT→CTT) | PP_4882 → | iron ABC transporter permease |
| RA | 5,552,961 | T→G | 21.4% | intergenic (+576/+85) | PP_4882 → / ← PP_5717 | iron ABC transporter permease/hypothetical protein |
| RA | 5,566,464 | T→A | 17.7% | Q358L (CAG→CTG) | mutL ← | DNA mismatch repair protein MutL |
| RA | 5,566,467 | T→A | 16.7% | Q357L (CAG→CTG) | mutL ← | DNA mismatch repair protein MutL |
| RA | 5,614,099 | A→G | 13.3% | intergenic (+30/+52) | PP_4933 → / ← hldE | hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| RA | 5,662,472 | C→T | 13.8% | A71A (GCC→GCT) | PP_4969 → | hypothetical protein |
| RA | 5,732,025 | A→T | 12.5% | L196* (TTG→TAG) ‡ | hutI ← | imidazolonepropionase |
| RA | 5,732,026 | A→T | 12.5% | L196M (TTG→ATG) ‡ | hutI ← | imidazolonepropionase |
| RA | 5,782,792 | G→A | 10.3% | S404N (AGC→AAC) | kefA → | intermediate mechanosensitive channel protein |
| RA | 5,808,040 | A→G | 26.7% | intergenic (+119/+36) | mrcA → / ← maeB | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B |
| RA | 5,808,041 | T→C | 26.7% | intergenic (+120/+35) | mrcA → / ← maeB | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B |
| RA | 5,808,042 | G→A | 26.7% | intergenic (+121/+34) | mrcA → / ← maeB | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B |
| RA | 5,808,043 | C→T | 26.7% | intergenic (+122/+33) | mrcA → / ← maeB | penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B |
| RA | 5,821,953 | T→A | 12.5% | L173Q (CTG→CAG) | metW → | methionine biosynthesis protein MetW |
| RA | 5,845,658 | Δ1 bp | 30.8% | intergenic (+27/‑75) | coaD → / → yfhL | phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein |
| RA | 5,856,165 | C→T | 14.8% | D12D (GAC→GAT) | PP_5133 → | membrane protein |
| RA | 5,918,681 | G→A | 16.0% | T84I (ACC→ATC) | PP_5188 ← | AsnC/Lrp family transcriptional regulator |
| RA | 5,922,351 | G→T | 13.3% | P712P (CCC→CCA) | gcvP‑II ← | glycine dehydrogenase |
| RA | 5,951,645 | T→C | 16.7% | Q456Q (CAA→CAG) | ppk ← | polyphosphate kinase |
| RA | 5,951,650 | G→A | 14.8% | L455L (CTG→TTG) | ppk ← | polyphosphate kinase |
| RA | 5,984,492 | T→C | 23.6% | intergenic (+32/+57) | PP_5242 → / ← ycaC‑II | GAF domain‑containing sensor histidine kinase/putative hydrolase |
| RA | 5,984,498 | G→A | 22.2% | intergenic (+38/+51) | PP_5242 → / ← ycaC‑II | GAF domain‑containing sensor histidine kinase/putative hydrolase |
| RA | 5,984,500 | T→C | 20.0% | intergenic (+40/+49) | PP_5242 → / ← ycaC‑II | GAF domain‑containing sensor histidine kinase/putative hydrolase |
| RA | 5,984,503 | G→A | 20.0% | intergenic (+43/+46) | PP_5242 → / ← ycaC‑II | GAF domain‑containing sensor histidine kinase/putative hydrolase |
| RA | 5,984,505 | T→C | 18.2% | intergenic (+45/+44) | PP_5242 → / ← ycaC‑II | GAF domain‑containing sensor histidine kinase/putative hydrolase |
| RA | 5,988,865 | G→A | 22.5% | intergenic (+103/‑443) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,875 | T→C | 23.2% | intergenic (+113/‑433) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,880 | C→T | 21.4% | intergenic (+118/‑428) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,881 | G→T | 21.4% | intergenic (+119/‑427) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,882 | C→T | 21.5% | intergenic (+120/‑426) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,885 | A→G | 20.9% | intergenic (+123/‑423) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,891 | G→C | 19.5% | intergenic (+129/‑417) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,893 | C→G | 20.5% | intergenic (+131/‑415) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,896 | C→T | 20.4% | intergenic (+134/‑412) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,900 | C→G | 20.0% | intergenic (+138/‑408) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,904 | C→T | 20.0% | intergenic (+142/‑404) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,906 | C→T | 20.0% | intergenic (+144/‑402) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,945 | C→A | 18.4% | intergenic (+183/‑363) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,950 | C→T | 18.4% | intergenic (+188/‑358) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,951 | A→G | 18.4% | intergenic (+189/‑357) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,961 | T→C | 13.0% | intergenic (+199/‑347) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,967 | Δ1 bp | 10.0% | intergenic (+205/‑341) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 6,005,043 | T→G | 15.8% | intergenic (+25/‑151) | PP_5259 → / → ydcJ | LysR family transcriptional regulator/metalloprotein |
| RA | 6,005,050 | G→C | 17.5% | intergenic (+32/‑144) | PP_5259 → / → ydcJ | LysR family transcriptional regulator/metalloprotein |
| RA | 6,005,053 | A→T | 17.9% | intergenic (+35/‑141) | PP_5259 → / → ydcJ | LysR family transcriptional regulator/metalloprotein |
| RA | 6,022,417 | T→C | 10.8% | L190P (CTG→CCG) | PP_5273 → | oxidoreductase |
| RA | 6,054,917 | A→G | 10.8% | Q80R (CAG→CGG) | exbD → | TonB‑gated outer membrane transporter gating inner membrane protein |
| RA | 6,071,939 | C→G | 10.8% | L214F (TTG→TTC) | pstB‑II ← | phosphate ABC transporter ATP‑binding protein |
| RA | 6,079,777 | C→A | 12.1% | G45G (GGC→GGA) | PP_5331 → | acyl‑CoA thioesterase |
| RA | 6,081,044 | T→A | 16.1% | intergenic (+35/+27) | PP_5332 → / ← PP_5333 | hypothetical protein/hypothetical protein |
| RA | 6,081,045 | T→A | 15.8% | intergenic (+36/+26) | PP_5332 → / ← PP_5333 | hypothetical protein/hypothetical protein |
| RA | 6,112,033 | T→A | 11.1% | H118Q (CAT→CAA) | PP_5362 → | hypothetical protein |
| RA | 6,129,039 | G→T | 15.4% | G60* (GGA→TGA) | PP_5376 → | hypothetical protein |
| RA | 6,129,123 | G→T | 15.4% | E88* (GAA→TAA) | PP_5376 → | hypothetical protein |
| RA | 6,178,698 | G→A | 13.6% | P146S (CCT→TCT) | atpA ← | ATP synthase subunit alpha |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 2225058 | 2225059 | 2 | 2 [0] | [0] 2 | PP_1963 | hypothetical protein |
| * | * | ÷ | NC_002947 | 3416379 | 3416412 | 34 | 2 [1] | [1] 3 | PP_3029 | DNA cytosine methyltransferase family protein |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 100443 = | 33 (1.500) | 3 (0.160) | 3/222 | NT | 10.6% | intergenic (‑35/+87) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein |
| ? | NC_002947 | 100525 = | 22 (1.150) | intergenic (‑117/+5) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein | |||||
| * | ? | NC_002947 | = 107836 | 25 (1.130) | 4 (0.190) | 4/242 | NT | 12.8% | coding (605/642 nt) | PP_5426 | hypothetical protein |
| ? | NC_002947 | = 107861 | 31 (1.490) | coding (580/642 nt) | PP_5426 | hypothetical protein | |||||
| * | ? | NC_002947 | = 129985 | 35 (1.590) | 4 (0.190) | 4/250 | NT | 10.6% | coding (2463/2748 nt) | polA | DNA polymerase I |
| ? | NC_002947 | = 130008 | 33 (1.530) | coding (2486/2748 nt) | polA | DNA polymerase I | |||||
| * | ? | NC_002947 | = 380858 | 13 (0.590) | 7 (0.390) | 7/210 | NT | 32.1% | intergenic (+45/+64) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | = 380892 | 19 (1.050) | intergenic (+79/+30) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer | |||||
| * | ? | NC_002947 | 422678 = | 26 (1.180) | 4 (0.190) | 4/244 | NT | 13.6% | coding (1273/2787 nt) | PP_0348 | hypothetical protein |
| ? | NC_002947 | 422721 = | 26 (1.240) | coding (1230/2787 nt) | PP_0348 | hypothetical protein | |||||
| * | ? | NC_002947 | 478264 = | 16 (0.730) | 4 (0.240) | 4/196 | NT | 25.6% | intergenic (+9/+101) | PP_0393/cca | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| ? | NC_002947 | 478359 = | 11 (0.650) | intergenic (+104/+6) | PP_0393/cca | 2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase | |||||
| * | ? | NC_002947 | = 644887 | 37 (1.680) | 3 (0.140) | 3/248 | NT | 7.2% | coding (133/978 nt) | acoA | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha |
| ? | NC_002947 | = 644940 | 42 (1.970) | coding (80/978 nt) | acoA | acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha | |||||
| * | ? | NC_002947 | = 661596 | 31 (1.410) | 3 (0.140) | 3/246 | NT | 9.7% | intergenic (+103/+24) | PP_0568/PP_0569 | hypothetical protein/MATE efflux family protein |
| ? | NC_002947 | = 661622 | 26 (1.230) | coding (1336/1338 nt) | PP_0569 | MATE efflux family protein | |||||
| * | ? | NC_002947 | 742918 = | NA (NA) | 3 (0.140) | 3/244 | NT | NA | coding (1016/1422 nt) | PP_0635 | group II intron‑encoding maturase |
| ? | NC_002947 | 742948 = | NA (NA) | coding (1046/1422 nt) | PP_0635 | group II intron‑encoding maturase | |||||
| * | ? | NC_002947 | 938937 = | 21 (0.950) | 3 (0.140) | 3/244 | NT | 14.0% | coding (6688/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | 938967 = | 17 (0.810) | coding (6658/18933 nt) | PP_0806 | surface adhesion protein | |||||
| * | ? | NC_002947 | 1113981 = | 16 (0.730) | 3 (0.140) | 3/246 | NT | 16.1% | coding (831/954 nt) | rlmF | ribosomal RNA large subunit methyltransferase F |
| ? | NC_002947 | 1114015 = | 16 (0.760) | coding (797/954 nt) | rlmF | ribosomal RNA large subunit methyltransferase F | |||||
| * | ? | NC_002947 | = 1264252 | 28 (1.270) | 4 (0.190) | 4/244 | NT | 12.8% | coding (161/1659 nt) | PP_1105 | ATP‑dependent DNA ligase |
| ? | NC_002947 | = 1264274 | 28 (1.330) | coding (139/1659 nt) | PP_1105 | ATP‑dependent DNA ligase | |||||
| * | ? | NC_002947 | = 1341033 | 26 (1.180) | 3 (0.140) | 3/246 | NT | 11.8% | coding (242/870 nt) | PP_1165 | hypothetical protein |
| ? | NC_002947 | = 1341066 | 20 (0.940) | coding (209/870 nt) | PP_1165 | hypothetical protein | |||||
| * | ? | NC_002947 | 1862281 = | 15 (0.680) | 3 (0.140) | 3/248 | NT | 16.9% | intergenic (‑245/‑76) | purM/PP_1666 | phosphoribosylformylglycinamidine cyclo‑ligase/hypothetical protein |
| ? | NC_002947 | 1862302 = | 15 (0.700) | intergenic (‑266/‑55) | purM/PP_1666 | phosphoribosylformylglycinamidine cyclo‑ligase/hypothetical protein | |||||
| * | ? | NC_002947 | 2048837 = | 9 (0.410) | 3 (0.160) | 3/222 | NT | 26.3% | intergenic (+33/+106) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
| ? | NC_002947 | 2048928 = | 9 (0.470) | intergenic (+124/+15) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 2057866 | 15 (0.680) | 3 (0.170) | 3/208 | NT | 20.6% | intergenic (+39/+89) | PP_1832/PP_1833 | oxidase/hypothetical protein |
| ? | NC_002947 | = 2057906 | 11 (0.620) | intergenic (+79/+49) | PP_1832/PP_1833 | oxidase/hypothetical protein | |||||
| * | ? | NC_002947 | = 2295841 | 15 (0.680) | 3 (0.170) | 3/208 | NT | 17.1% | intergenic (+44/+89) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein |
| ? | NC_002947 | = 2295878 | 17 (0.950) | intergenic (+81/+52) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein | |||||
| * | ? | NC_002947 | = 2309225 | 17 (0.770) | 3 (0.140) | 3/244 | NT | 13.3% | coding (840/960 nt) | PP_2032 | ATPase |
| ? | NC_002947 | = 2309260 | 23 (1.100) | coding (805/960 nt) | PP_2032 | ATPase | |||||
| * | ? | NC_002947 | 2379610 = | 19 (0.860) | 4 (0.190) | 4/250 | NT | 17.2% | intergenic (+22/‑68) | cmpX/PP_2088 | protein CmpX/RNA polymerase sigma factor SigX |
| ? | NC_002947 | 2379652 = | 20 (0.930) | intergenic (+64/‑26) | cmpX/PP_2088 | protein CmpX/RNA polymerase sigma factor SigX | |||||
| * | ? | NC_002947 | = 2503705 | 14 (0.640) | 3 (0.150) | 3/230 | NT | 16.9% | intergenic (+21/‑212) | speB/PP_2197 | agmatinase/hypothetical protein |
| ? | NC_002947 | = 2503767 | 17 (0.860) | intergenic (+83/‑150) | speB/PP_2197 | agmatinase/hypothetical protein | |||||
| * | ? | NC_002947 | 3276247 = | 4 (0.180) | 3 (0.140) | 3/248 | NT | 43.2% | coding (218/312 nt) | PP_2874 | hypothetical protein |
| ? | NC_002947 | 3276283 = | 4 (0.190) | coding (254/312 nt) | PP_2874 | hypothetical protein | |||||
| * | ? | NC_002947 | 3947957 = | 7 (0.320) | 6 (0.350) | 6/200 | NT | 51.2% | coding (136/1797 nt) | PP_3483 | type II secretion system protein |
| ? | NC_002947 | 3948042 = | 6 (0.350) | coding (51/1797 nt) | PP_3483 | type II secretion system protein | |||||
| * | ? | NC_002947 | 4087738 = | 27 (1.230) | 4 (0.200) | 4/238 | NT | 15.1% | intergenic (+343/‑83) | PP_3597/PP_3598 | amino acid ABC transporter ATP‑binding protein/peptidase C26 |
| ? | NC_002947 | 4087773 = | 20 (0.980) | intergenic (+378/‑48) | PP_3597/PP_3598 | amino acid ABC transporter ATP‑binding protein/peptidase C26 | |||||
| * | ? | NC_002947 | = 4094693 | 12 (0.540) | 7 (0.350) | 7/232 | NT | 39.0% | intergenic (+65/+70) | PP_3602/PP_3603 | 2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator |
| ? | NC_002947 | = 4094738 | 11 (0.550) | intergenic (+110/+25) | PP_3602/PP_3603 | 2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 4604719 | 23 (1.040) | 4 (0.190) | 4/244 | NT | 14.1% | coding (89/1767 nt) | PP_4077 | hypothetical protein |
| ? | NC_002947 | = 4604733 | 27 (1.290) | coding (103/1767 nt) | PP_4077 | hypothetical protein | |||||
| * | ? | NC_002947 | 4714580 = | 23 (1.040) | 4 (0.190) | 4/248 | NT | 14.0% | coding (652/891 nt) | PP_4172 | hypothetical protein |
| ? | NC_002947 | 4714619 = | 27 (1.260) | coding (691/891 nt) | PP_4172 | hypothetical protein | |||||
| * | ? | NC_002947 | = 4773156 | 19 (0.860) | 4 (0.200) | 4/230 | NT | 17.8% | coding (6156/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4773167 | 20 (1.010) | coding (6145/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
| * | ? | NC_002947 | = 4852498 | 15 (0.680) | 5 (0.340) | 4/174 | NT | 35.5% | intergenic (‑124/+173) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator |
| ? | NC_002947 | = 4852557 | 8 (0.540) | intergenic (‑183/+114) | recR/ybaB | recombination protein RecR/nucleoid‑associated broad specificity regulator | |||||
| * | ? | NC_002947 | = 4890813 | 26 (1.180) | 3 (0.150) | 3/238 | NT | 12.0% | intergenic (+168/‑71) | glxR/ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase |
| ? | NC_002947 | = 4890835 | 20 (0.980) | intergenic (+190/‑49) | glxR/ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase | |||||
| * | ? | NC_002947 | = 5119663 | 34 (1.540) | 4 (0.200) | 4/228 | NT | 10.9% | intergenic (+48/+83) | PP_4505/PP_4506 | sensor histidine kinase/nitroreductase family protein |
| ? | NC_002947 | = 5119680 | 35 (1.780) | intergenic (+65/+66) | PP_4505/PP_4506 | sensor histidine kinase/nitroreductase family protein | |||||
| * | ? | NC_002947 | = 5200727 | 33 (1.500) | 3 (0.140) | 3/246 | NT | 8.9% | coding (324/774 nt) | yafJ | amidotransferase |
| ? | NC_002947 | = 5200748 | 30 (1.420) | coding (303/774 nt) | yafJ | amidotransferase | |||||
| * | ? | NC_002947 | 5280943 = | 26 (1.180) | 4 (0.230) | 4/206 | NT | 17.8% | intergenic (+28/+110) | trmA/pcaG | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha |
| ? | NC_002947 | 5281029 = | 16 (0.900) | intergenic (+114/+24) | trmA/pcaG | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha | |||||
| * | ? | NC_002947 | = 5333257 | 25 (1.130) | 3 (0.150) | 3/226 | NT | 10.7% | intergenic (+41/‑202) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
| ? | NC_002947 | = 5333287 | 28 (1.440) | intergenic (+71/‑172) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein | |||||
| * | ? | NC_002947 | 5336765 = | 27 (1.230) | 4 (0.190) | 4/248 | NT | 12.9% | coding (167/1443 nt) | PP_4696 | nitrogen regulation protein NR(I) |
| ? | NC_002947 | 5336813 = | 28 (1.310) | coding (215/1443 nt) | PP_4696 | nitrogen regulation protein NR(I) | |||||
| * | ? | NC_002947 | 5692608 = | 30 (1.360) | 5 (0.250) | 5/234 | NT | 18.1% | intergenic (+21/‑149) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein |
| ? | NC_002947 | 5692692 = | 18 (0.890) | intergenic (+105/‑65) | PP_4994/PP_4995 | hypothetical protein/exopolysaccharide biosynthesis protein | |||||
| * | ? | NC_002947 | 5827863 = | 33 (1.500) | 3 (0.140) | 3/244 | NT | 8.9% | intergenic (+9/+190) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| ? | NC_002947 | 5827987 = | 30 (1.430) | intergenic (+133/+66) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 | |||||
| * | ? | NC_002947 | = 5838865 | 24 (1.090) | 3 (0.140) | 3/242 | NT | 12.3% | coding (179/993 nt) | yheT | putative hydrolase |
| ? | NC_002947 | = 5838883 | 20 (0.960) | coding (197/993 nt) | yheT | putative hydrolase | |||||
| * | ? | NC_002947 | = 5914240 | 7 (0.320) | 9 (0.520) | 7/200 | NT | 61.1% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | = 5914280 | 6 (0.350) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
| * | ? | NC_002947 | 5988340 = | 29 (1.320) | 3 (0.140) | 3/248 | NT | 10.2% | coding (1366/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
| ? | NC_002947 | 5988376 = | 25 (1.170) | coding (1402/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter | |||||
| * | ? | NC_002947 | = 5988813 | 28 (1.270) | 3 (0.150) | 3/240 | NT | 11.7% | intergenic (+51/‑495) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| ? | NC_002947 | 5989035 = | 19 (0.920) | intergenic (+273/‑273) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | NC_002947 | 6006595 = | 1 (0.050) | 9 (0.570) | 7/184 | NT | 91.3% | intergenic (+7/+92) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator |
| ? | NC_002947 | 6006679 = | 1 (0.060) | intergenic (+91/+8) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 6006630 | 0 (0.000) | 7 (0.440) | 6/184 | NT | 93.3% | intergenic (+42/+57) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator |
| ? | NC_002947 | = 6006642 | 1 (0.060) | intergenic (+54/+45) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 6019326 | 19 (0.860) | 4 (0.220) | 4/210 | NT | 14.9% | intergenic (‑71/+74) | dadX/dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase |
| ? | NC_002947 | = 6019356 | 30 (1.660) | intergenic (‑101/+44) | dadX/dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase | |||||