breseq  version 0.33.1  revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation freq annotation gene description
RA 13,094 A→T 6.0% D311V (GAT→GTT)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ
RA 17,199 G→T 12.5% intergenic (+3/‑57) nhaA → / → nhaR sodium‑proton antiporter/DNA‑binding transcriptional activator
RA 21,090 A→G 14.6% D341G (GAC→GGC)  ileS → isoleucyl‑tRNA synthetase
RA 56,544 C→T 9.4% F131F (TTC→TTT yabP → hypothetical protein
RA 120,663 C→T 17.1% C181Y (TGC→TAC)  speE ← spermidine synthase
RA 139,335 G→A 9.0% P278S (CCG→TCG)  htrE ← predicted outer membrane usher protein
RA 145,530 T→A 14.3% T233S (ACA→TCA)  sfsA ← predicted DNA‑binding transcriptional regulator
RA 149,587 T→C 13.9% Y40H (TAT→CAT)  mrcB → fused glycosyl transferase and transpeptidase
RA 151,149 C→T 11.2% S560S (AGC→AGT mrcB → fused glycosyl transferase and transpeptidase
RA 168,409 G→C 7.4% intergenic (‑78/‑290) map ← / → rpsB methionine aminopeptidase/30S ribosomal subunit protein S2
RA 168,415 C→G 6.1% intergenic (‑84/‑284) map ← / → rpsB methionine aminopeptidase/30S ribosomal subunit protein S2
RA 168,421 G→C 6.7% intergenic (‑90/‑278) map ← / → rpsB methionine aminopeptidase/30S ribosomal subunit protein S2
RA 202,703 G→A 100% noncoding (108/1542 nt) rrsH → 16S ribosomal RNA
RA 204,511 C→T 100% intergenic (+111/‑73) alaV → / → rrlH tRNA‑Ala/23S ribosomal RNA
RA 204,556 A→G 100% intergenic (+156/‑28) alaV → / → rrlH tRNA‑Ala/23S ribosomal RNA
RA 214,925 A→C 52.9% D12A (GAT→GCT)  dnaQ → DNA polymerase III epsilon subunit
RA 214,931 A→C 54.0% E14A (GAA→GCA)  dnaQ → DNA polymerase III epsilon subunit
RA 217,903 A→G 8.5% S2S (AGT→AGC yafU ← predicted inner membrane protein
RA 232,790 G→T 5.6% intergenic (‑29/+141) hemB ← / ← ykiB porphobilinogen synthase/hypothetical protein
RA 406,585 A→G 12.3% D8D (GAT→GAC ybeB ← hypothetical protein
RA 415,949 C→G 5.0% S257T (AGC→ACC) ‡ ybeZ ← hypothetical protein with nucleoside triphosphate hydrolase domain
RA 415,950 T→C 5.1% S257G (AGC→GGC) ‡ ybeZ ← hypothetical protein with nucleoside triphosphate hydrolase domain
RA 415,951 C→T 5.0% E256E (GAG→GAA ybeZ ← hypothetical protein with nucleoside triphosphate hydrolase domain
RA 415,960 A→G 6.0% I253I (ATT→ATC ybeZ ← hypothetical protein with nucleoside triphosphate hydrolase domain
RA 422,197 G→A 6.4% F94F (TTC→TTT asnB ← asparagine synthetase B
RA 530,638 T→C 12.4% E105E (GAA→GAG ybhP ← predicted DNase
RA 539,433 T→C 7.5% V132V (GTA→GTG dps ← Fe‑binding and storage protein
RA 705,870 A→G 30.8% intergenic (‑367/+128) ymcC ← / ← serX predicted outer membrane lipoprotein/tRNA‑Ser
RA 709,001 A→G 9.4% Y102H (TAT→CAT)  yceI ← hypothetical protein
RA 746,106 G→A 11.7% G256D (GGC→GAC)  ndh → respiratory NADH dehydrogenase 2/cupric reductase
RA 750,056 T→A 9.7% D1055V (GAT→GTT)  mfd ← transcription‑repair coupling factor
RA 753,855 T→C 6.2% N189S (AAC→AGC)  ycfT ← predicted inner membrane protein
RA 762,795 C→T 9.1% V27V (GTG→GTA potC ← polyamine transporter subunit
RA 778,651 C→G 5.7% intergenic (‑357/‑163) minC ← / → ycgJ cell division inhibitor/hypothetical protein
RA 778,653 T→G 5.1% intergenic (‑359/‑161) minC ← / → ycgJ cell division inhibitor/hypothetical protein
RA 828,622 T→C 7.2% S226G (AGT→GGT)  narX ← sensory histidine kinase in two‑component regulatory system with NarL
RA 863,791 A→C 6.5% Y31S (TAT→TCT) ‡ yciQ → predicted inner membrane protein
RA 863,792 T→A 6.3% Y31* (TAT→TAA) ‡ yciQ → predicted inner membrane protein
RA 863,793 G→T 8.0% E32* (GAA→TAA)  yciQ → predicted inner membrane protein
RA 872,042 C→T 5.2% H681Y (CAT→TAT)  topA → DNA topoisomerase I, omega subunit
RA 874,334 T→C 6.3% pseudogene (221/299 nt)
pseudogene (111/189 nt)
yciX →
yciX →
ECK1270:JW5198+JW5199:b4574; hypothetical protein
ECK1270:JW5199:b4523; hypothetical protein, C‑ter fragment
RA 898,949 A→G 7.1% N70S (AAC→AGC)  pspB → transcriptional regulator of psp operon
RA 965,646 C→T 8.9% G83D (GGC→GAC)  ydeM ← conserved hypothetical protein
RA 974,093 A→G 8.2% T290A (ACG→GCG)  lsrB → AI2 transporter
RA 986,858 G→A 5.0% A367T (GCA→ACA)  ynfE → oxidoreductase subunit
RA 1,008,960 G→A 5.0% L98L (CTG→CTA folM → dihydrofolate reductase isozyme
RA 1,036,505 G→A 100% A632A (GCG→GCA rsxC → fused predicted 4Fe‑4S ferredoxin‑type protein
RA 1,056,210 T→C 8.5% L58S (TTA→TCA)  rnt → ribonuclease T (RNase T)
RA 1,091,167 T→C 8.4% E178E (GAA→GAG sufB ← component of SufBCD complex
RA 1,093,658 T→C 20.8% T907A (ACA→GCA)  ydiJ ← predicted FAD‑linked oxidoreductase
RA 1,139,620 T→C 24.5% S332S (AGT→AGC ydjN → predicted transporter
RA 1,187,540 G→A 12.5% G10R (GGG→AGG)  yeaI → predicted diguanylate cyclase
RA 1,192,955 T→G 5.5% E236D (GAA→GAC) ‡ fadD ← acyl‑CoA synthetase
RA 1,192,956 T→A 5.5% E236V (GAA→GTA) ‡ fadD ← acyl‑CoA synthetase
RA 1,219,094 C→T 18.0% A119A (GCG→GCA proQ ← predicted structural transport element
RA 1,225,925 T→C 8.6% L77P (CTT→CCT)  yebV → hypothetical protein
RA 1,283,882 T→C 11.0% T1887T (ACT→ACC yeeJ → adhesin
RA 1,368,720 T→C 10.4% N232S (AAC→AGC)  dusC ← tRNA‑dihydrouridine synthase C
RA 1,471,058 C→A 5.2% G222C (GGT→TGT)  yfaL ← adhesin
RA 1,483,542 C→T 8.0% A157V (GCA→GTA)  glpC → sn‑glycerol‑3‑phosphate dehydrogenase (anaerobic), small subunit
RA 1,515,612 G→A 10.9% S135L (TCA→TTA)  cvpA ← membrane protein required for colicin V production
RA 1,613,318 A→G 7.0% F353S (TTC→TCC)  eutH ← predicted inner membrane protein
RA 1,618,811 C→T 5.9% V321V (GTG→GTA eutI ← predicted phosphotransacetylase subunit
RA 1,694,162:1 +C 8.0% coding (56/1215 nt) iscS ← cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent
RA 1,694,168 G→C 7.2% P17R (CCG→CGG)  iscS ← cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent
RA 1,694,172 C→G 7.3% D16H (GAC→CAC)  iscS ← cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent
RA 1,694,173 C→G 7.3% V15V (GTG→GTC iscS ← cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent
RA 1,695,520 G→A 6.9% Q164* (CAG→TAG)  yfhQ ← predicted methyltransferase
RA 1,706,900 T→C 9.9% I159V (ATT→GTT)  yphB ← conserved hypothetical protein
RA 1,709,579 A→G 8.9% V490A (GTC→GCC)  yphE ← fused predicted sugar transporter subunits and ATP‑binding components of ABC superfamily
RA 1,735,602 T→C 11.0% E157E (GAA→GAG era ← membrane‑associated, 16S rRNA‑binding GTPase
RA 1,744,552 G→A 9.6% V483I (GTC→ATC)  nadB → quinolinate synthase, L‑aspartate oxidase (B protein) subunit
RA 1,763,540 A→G 9.3% noncoding (304/1542 nt) rrsG ← 16S ribosomal RNA
RA 1,763,556 T→C 48.8% noncoding (288/1542 nt) rrsG ← 16S ribosomal RNA
RA 1,763,558 G→C 10.2% noncoding (286/1542 nt) rrsG ← 16S ribosomal RNA
RA 1,763,559 G→T 6.7% noncoding (285/1542 nt) rrsG ← 16S ribosomal RNA
RA 1,763,580 G→T 9.1% noncoding (264/1542 nt) rrsG ← 16S ribosomal RNA
RA 1,763,594 A→T 6.5% noncoding (250/1542 nt) rrsG ← 16S ribosomal RNA
RA 1,763,636 A→G 17.6% noncoding (208/1542 nt) rrsG ← 16S ribosomal RNA
RA 1,804,090 G→A 70.7% G52G (GGG→GGA mprA → DNA‑binding transcriptional regulator
RA 1,813,392 G→A 15.1% R595R (CGC→CGT alaS ← alanyl‑tRNA synthetase
RA 1,824,288 G→A 8.1% D452D (GAC→GAT hypF ← carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases
RA 1,892,019:1 +GC 100% intergenic (‑437/+54) gudP ← / ← ygdL predicted D‑glucarate transporter/conserved hypothetical protein
RA 1,968,626 A→G 6.7% S2P (TCC→CCC)  tktA ← transketolase 1, thiamin‑binding
RA 1,976,997 G→A 6.0% L83L (TTG→TTA sprT → conserved hypothetical protein
RA 2,012,040 C→T 8.4% T64T (ACG→ACA yqhA ← conserved inner membrane protein
RA 2,012,045 T→C 9.5% M63V (ATG→GTG)  yqhA ← conserved inner membrane protein
RA 2,061,532 C→A 5.0% D13E (GAC→GAA rpsU → 30S ribosomal subunit protein S21
RA 2,061,535 A→C 5.3% V14V (GTA→GTC rpsU → 30S ribosomal subunit protein S21
RA 2,061,538 T→A 5.4% A15A (GCT→GCA rpsU → 30S ribosomal subunit protein S21
RA 2,061,539 C→A 5.4% L16M (CTG→ATG)  rpsU → 30S ribosomal subunit protein S21
RA 2,061,553 G→A 5.7% K20K (AAG→AAA rpsU → 30S ribosomal subunit protein S21
RA 2,061,556 T→C 6.1% R21R (CGT→CGC rpsU → 30S ribosomal subunit protein S21
RA 2,061,557 T→A 6.1% S22T (TCC→ACC)  rpsU → 30S ribosomal subunit protein S21
RA 2,061,560 T→A 5.4% C23S (TGC→AGC) ‡ rpsU → 30S ribosomal subunit protein S21
RA 2,061,561 G→T 5.4% C23F (TGC→TTC) ‡ rpsU → 30S ribosomal subunit protein S21
RA 2,061,569 G→A 6.6% A26T (GCA→ACA) ‡ rpsU → 30S ribosomal subunit protein S21
RA 2,061,571 A→T 6.8% A26A (GCA→GCT) ‡ rpsU → 30S ribosomal subunit protein S21
RA 2,061,575 G→C 9.5% V28L (GTT→CTT) ‡ rpsU → 30S ribosomal subunit protein S21
RA 2,061,577 T→G 7.6% V28V (GTT→GTG) ‡ rpsU → 30S ribosomal subunit protein S21
RA 2,061,581 G→A 6.8% A30T (GCG→ACG)  rpsU → 30S ribosomal subunit protein S21
RA 2,076,795 C→T 7.4% H121Y (CAT→TAT)  ebgC → cryptic beta‑D‑galactosidase, beta subunit
RA 2,087,666 C→T 7.9% T54I (ACC→ATC)  yhaH → predicted inner membrane protein
RA 2,134,912 C→T 6.9% L473L (CTG→CTA pnp ← polynucleotide phosphorylase/polyadenylase
RA 2,184,264 G→C 8.7% V1514L (GTG→CTG)  gltB → glutamate synthase, large subunit
RA 2,190,181 T→A 6.8% L11I (TTA→ATA) ‡ dcuD → predicted transporter
RA 2,190,183 A→T 6.8% L11F (TTA→TTT) ‡ dcuD → predicted transporter
RA 2,190,185 T→A 6.5% I12N (ATT→AAT)  dcuD → predicted transporter
RA 2,197,282 G→A 7.3% D420N (GAT→AAT)  degQ → serine endoprotease, periplasmic
RA 2,197,287 G→A 7.5% R421R (CGG→CGA degQ → serine endoprotease, periplasmic
RA 2,197,407 C→T 6.3% intergenic (+15/‑75) degQ → / → degS serine endoprotease, periplasmic/serine endoprotease, periplasmic
RA 2,239,028 C→T 7.8% D14N (GAC→AAC)  zraR ← fused DNA‑binding response regulator in two‑component regulatory system with ZraS
RA 2,281,121 A→G 12.6% F67S (TTT→TCT)  fabR ← DNA‑binding transcriptional repressor
RA 2,288,799 A→T 8.0% intergenic (+108/‑490) argE → / → ppc acetylornithine deacetylase/phosphoenolpyruvate carboxylase
RA 2,335,293 T→C 13.2% I914I (ATT→ATC fdoG → formate dehydrogenase‑O, large subunit
RA 2,355,216 T→C 14.9% Y328C (TAT→TGT)  yihE ← predicted kinase
RA 2,355,219 A→C 16.2% M327R (ATG→AGG)  yihE ← predicted kinase
RA 2,359,227 Δ1 bp 6.2% noncoding (1868/2905 nt) rrlA ← 23S ribosomal RNA
RA 2,359,867 G→A 42.0% noncoding (1228/2905 nt) rrlA ← 23S ribosomal RNA
RA 2,359,876 C→T 38.8% noncoding (1219/2905 nt) rrlA ← 23S ribosomal RNA
RA 2,391,412 A→G 7.5% R446R (CGT→CGC recQ ← ATP‑dependent DNA helicase
RA 2,429,321 T→C 5.5% M88V (ATG→GTG)  wzzE ← Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein
RA 2,464,993 C→G 8.5% A217A (GCC→GCG atpB → F0 sector of membrane‑bound ATP synthase, subunit a
RA 2,464,999 G→A 8.5% E219E (GAG→GAA atpB → F0 sector of membrane‑bound ATP synthase, subunit a
RA 2,465,005 T→C 8.7% I221I (ATT→ATC atpB → F0 sector of membrane‑bound ATP synthase, subunit a
RA 2,465,008 C→T 8.8% F222F (TTC→TTT atpB → F0 sector of membrane‑bound ATP synthase, subunit a
RA 2,465,011 T→C 8.5% I223I (ATT→ATC atpB → F0 sector of membrane‑bound ATP synthase, subunit a
RA 2,465,020 T→G 8.0% A226A (GCT→GCG atpB → F0 sector of membrane‑bound ATP synthase, subunit a
RA 2,465,029 G→A 7.5% L229L (TTG→TTA atpB → F0 sector of membrane‑bound ATP synthase, subunit a
RA 2,469,966 T→G 5.2% L316L (CTT→CTG atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,469,972 A→G 5.4% A318A (GCA→GCG atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,469,978 G→C 5.6% V320V (GTG→GTC atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,469,985 A→T 5.2% S323C (AGC→TGC) ‡ atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,469,986 G→C 5.1% S323T (AGC→ACC) ‡ atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,469,991 C→G 5.3% Q325E (CAG→GAG) ‡ atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,469,993 G→C 5.6% Q325H (CAG→CAC) ‡ atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,470,002 T→G 5.8% S328S (TCT→TCG atpD → F1 sector of membrane‑bound ATP synthase, beta subunit
RA 2,489,124 G→A 5.2% T41T (ACG→ACA dnaN → DNA polymerase III, beta subunit
RA 2,526,945 C→T 8.4% E13K (GAG→AAG)  ttk ← division inhibitor
RA 2,546,001 C→T 12.2% M182I (ATG→ATA rfaF ← ADP‑heptose:LPS heptosyltransferase II
RA 2,549,980 A→G 6.0% T353A (ACC→GCC)  kbl → glycine C‑acetyltransferase
RA 2,550,360 A→G 5.2% K77K (AAA→AAG tdh → threonine 3‑dehydrogenase, NAD(P)‑binding
RA 2,589,325 A→G 16.0% intergenic (‑1/+798) gadE ← / ← hdeD DNA‑binding transcriptional activator/acid‑resistance membrane protein
RA 2,605,853 T→C 7.1% V14V (GTT→GTC yhiO → predicted universal stress (ethanol tolerance) protein B
RA 2,625,149 G→A 14.3% R16H (CGT→CAT)  ftsX → predicted transporter subunit
RA 2,706,538 T→C 5.8% S168P (TCT→CCT)  rpe → D‑ribulose‑5‑phosphate 3‑epimerase
RA 2,714,239 C→A 8.4% R41L (CGC→CTC)  nirB ← nitrite reductase, large subunit, NAD(P)H‑binding
RA 2,727,940 T→C 5.7% F59F (TTT→TTC kefB → potassium:proton antiporter
RA 2,728,325 C→T 29.0% L188L (CTG→TTG)  kefB → potassium:proton antiporter
RA 2,736,671 T→C 8.4% F605F (TTT→TTC fusA → protein chain elongation factor EF‑G
RA 2,811,028 G→A 13.1% A573V (GCA→GTA)  uvrA ← ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
RA 2,816,537 T→G 7.6% R65R (CGT→CGG soxR → DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing
RA 2,816,539 T→A 7.6% I66N (ATT→AAT)  soxR → DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing
RA 2,816,542 G→C 7.0% G67A (GGC→GCC)  soxR → DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing
RA 2,816,545 T→A 7.2% I68N (ATT→AAT)  soxR → DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing
RA 2,816,547 C→A 6.9% P69T (CCG→ACG)  soxR → DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing
RA 2,892,177 G→A 12.6% D278N (GAC→AAC)  ytfQ → predicted sugar transporter subunit
RA 2,948,260 G→A 14.3% intergenic (‑20/+118) yjjB ← / ← yjjP conserved inner membrane protein/predicted inner membrane protein
RA 2,973,690 A→T 11.3% K29I (AAA→ATA)  nadR → bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE 37564 =42 (0.570)5 (0.070) 4/92 NT 11.3% coding (501/1143 nt) caiA crotonobetaine reductase subunit II, FAD‑binding
?minE 37583 = 40 (0.590)coding (482/1143 nt) caiA crotonobetaine reductase subunit II, FAD‑binding
* ? minE 202689 =0 (0.000)8 (0.140)
+GGAGCAAGCTC
3/78 NT 100% noncoding (94/1542 nt) rrsH 16S ribosomal RNA
?minE = 2763338 0 (0.000)noncoding (76/1542 nt) rrsE 16S ribosomal RNA
* ? minE = 204740NA (NA)6 (0.100) 4/84 NT NA noncoding (157/2904 nt) rrlH 23S ribosomal RNA
?minE = 204751 NA (NA)noncoding (168/2904 nt) rrlH 23S ribosomal RNA
* ? minE = 205293NA (NA)5 (0.070) 3/92 NT NA noncoding (710/2904 nt) rrlH 23S ribosomal RNA
?minE = 205316 NA (NA)noncoding (733/2904 nt) rrlH 23S ribosomal RNA
* ? minE = 206447NA (NA)14 (0.200)
+GC
6/96 NT NA noncoding (1864/2904 nt) rrlH 23S ribosomal RNA
?minE 206459 = NA (NA)noncoding (1876/2904 nt) rrlH 23S ribosomal RNA
* ? minE 206841 =NA (NA)10 (0.160) 3/86 NT NA noncoding (2258/2904 nt) rrlH 23S ribosomal RNA
?minE 206866 = NA (NA)noncoding (2283/2904 nt) rrlH 23S ribosomal RNA
* ? minE = 21562252 (0.710)22 (0.670)
+27 bp
17/46 NT 39.4% coding (732/732 nt) dnaQ DNA polymerase III epsilon subunit
?minE 2705182 = 99 (1.340)intergenic (+106/‑1) damX/dam hypothetical protein/DNA adenine methylase
* ? minE 384735 =100 (1.360)8 (0.130) 3/84 NT 11.2% intergenic (+125/‑56) ybdB/cstA conserved hypothetical protein/carbon starvation protein
?minE 384764 = 43 (0.700)intergenic (+154/‑27) ybdB/cstA conserved hypothetical protein/carbon starvation protein
* ? minE 391476 =44 (0.600)6 (0.090) 3/94 NT 11.0% intergenic (‑10/+137) ybdN/ybdO conserved hypothetical protein/predicted DNA‑binding transcriptional regulator
?minE 391506 = 56 (0.810)intergenic (‑40/+107) ybdN/ybdO conserved hypothetical protein/predicted DNA‑binding transcriptional regulator
* ? minE = 43286785 (1.150)7 (0.100) 3/92 NT 7.3% coding (1233/1407 nt) ybfM predicted outer membrane porin
?minE = 432885 99 (1.460)coding (1251/1407 nt) ybfM predicted outer membrane porin
* ? minE 436259 =57 (0.770)73 (1.080) 36/92 NT 54.8% intergenic (‑156/‑29) ybfF/seqA conserved hypothetical protein/regulatory protein for replication initiation
?minE = 2706018 68 (1.010)coding (836/837 nt) dam DNA adenine methylase
* ? minE = 43683398 (1.330)101 (1.370) 44/100 NT 54.4% coding (546/546 nt) seqA regulatory protein for replication initiation
?minE 1803907 = 71 (0.960)intergenic (+63/‑28) ygaH/mprA predicted inner membrane protein/DNA‑binding transcriptional regulator
* ? minE 775766 =40 (0.540)8 (0.120) 4/92 NT 16.9% intergenic (+138/+727) icd/minE isocitrate dehydrogenase, specific for NADP+/cell division topological specificity factor
?minE 775793 = 42 (0.620)intergenic (+165/+700) icd/minE isocitrate dehydrogenase, specific for NADP+/cell division topological specificity factor
* ? minE 800496 =80 (1.090)5 (0.080) 3/90 NT 6.9% coding (833/1419 nt) dhaH fused predicted dihydroxyacetone‑specific PTS enzyme HPr component and EI component
?minE 800525 = 63 (0.950)coding (804/1419 nt) dhaH fused predicted dihydroxyacetone‑specific PTS enzyme HPr component and EI component
* ? minE = 100848486 (1.170)7 (0.100) 3/94 NT 8.2% coding (1237/1383 nt) ydgI predicted arginine/ornithine antiporter transporter
?minE = 1008499 75 (1.080)coding (1252/1383 nt) ydgI predicted arginine/ornithine antiporter transporter
* ? minE = 107322181 (1.100)5 (0.070) 3/92 NT 6.4% coding (598/1257 nt) ydhQ conserved hypothetical protein
?minE = 1073233 72 (1.060)coding (586/1257 nt) ydhQ conserved hypothetical protein
* ? minE = 108364760 (0.810)5 (0.080) 3/88 NT 8.2% coding (259/1413 nt) pykF pyruvate kinase I
?minE = 1083662 59 (0.910)coding (274/1413 nt) pykF pyruvate kinase I
* ? minE = 132240256 (0.760)4 (0.060) 3/92 NT 7.2% coding (532/894 nt) galF predicted subunit with GalU
?minE = 1322416 52 (0.770)coding (518/894 nt) galF predicted subunit with GalU
* ? minE 1781664 =91 (1.240)5 (0.080) 3/90 NT 6.7% coding (115/1197 nt) yfjD predicted inner membrane protein
?minE 1781691 = 57 (0.860)coding (142/1197 nt) yfjD predicted inner membrane protein
* ? minE 2156775 =53 (0.720)4 (0.060) 3/90 NT 8.2% coding (73/1173 nt) obgE GTPase involved in cell partioning and DNA repair
?minE 2156803 = 42 (0.640)coding (45/1173 nt) obgE GTPase involved in cell partioning and DNA repair
* ? minE = 228918079 (1.070)4 (0.060) 3/88 NT 6.3% intergenic (+489/‑109) argE/ppc acetylornithine deacetylase/phosphoenolpyruvate carboxylase
?minE = 2289203 49 (0.760)intergenic (+512/‑86) argE/ppc acetylornithine deacetylase/phosphoenolpyruvate carboxylase
* ? minE = 2388794108 (1.470)5 (0.070) 3/92 NT 6.2% coding (650/1023 nt) pldB lysophospholipase L(2)
?minE = 2388819 53 (0.780)coding (625/1023 nt) pldB lysophospholipase L(2)
* ? minE 2543149 =133 (1.810)6 (0.090) 3/88 NT 5.0% coding (987/1074 nt) rfaK lipopolysaccharide core biosynthesis
?minE 2543186 = 110 (1.700)coding (1024/1074 nt) rfaK lipopolysaccharide core biosynthesis
* ? minE 2578583 =99 (1.340)7 (0.100) 3/94 NT 7.4% coding (82/1398 nt) yhjA predicted cytochrome C peroxidase
?minE 2578605 = 82 (1.190)coding (104/1398 nt) yhjA predicted cytochrome C peroxidase
* ? minE 2744431 =40 (0.540)6 (0.090) 3/90 NT 12.9% coding (174/315 nt) rplX 50S ribosomal subunit protein L24
?minE 2744466 = 45 (0.680)coding (209/315 nt) rplX 50S ribosomal subunit protein L24
* ? minE 2827311 =90 (1.220)5 (0.080) 3/88 NT 5.5% coding (939/1116 nt) dcuA C4‑dicarboxylate antiporter
?minE 2827346 = 92 (1.420)coding (904/1116 nt) dcuA C4‑dicarboxylate antiporter
* ? minE = 297479067 (0.910)5 (0.070) 3/94 NT 7.8% coding (1186/1233 nt) nadR bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase
?minE = 2974812 55 (0.800)coding (1208/1233 nt) nadR bifunctional DNA‑binding transcriptional repressor and NMN adenylyltransferase