mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| MC JC | 3,827,189 | Δ438 bp | coding (385‑822/1020 nt) | ptxS ← | 2‑ketogluconate utilization repressor |
| RA | 4,717,498 | C→G | A254G (GCC→GGC) | PP_4173 → | two‑component system sensor histidine kinase/response regulator |
| RA | 4,743,195 | +C | intergenic (+464/+288) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,197 | A→G | intergenic (+466/+286) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,199 | C→T | intergenic (+468/+284) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,202 | C→T | intergenic (+471/+281) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,205 | C→G | intergenic (+474/+278) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,207 | 2 bp→CT | intergenic (+476/+275) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,221 | C→T | intergenic (+490/+262) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,223 | A→C | intergenic (+492/+260) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,743,226 | 2 bp→GC | intergenic (+495/+256) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 171395–172965 | 176268–172972 | 8–4874 | 3 [1] | [1] 2 | [PP_16SA]–[PP_5SA] | [PP_16SA],PP_23SA,[PP_5SA] |
| * | * | ÷ | NC_002947 | 176688–178395 | 181689–178402 | 8–5002 | 3 [1] | [1] 3 | PP_16SB–[PP_r01] | PP_16SB,PP_23SB,[PP_r01] |
| * | * | ÷ | NC_002947 | 4552100 | 4552174 | 75 | 2 [1] | [1] 2 | pydX | NADP‑dependent dihydropyrimidine dehydrogenase subunit |
| * | * | ÷ | NC_002947 | 6183852 | 6183858 | 7 | 25 [0] | [0] NA | atpI/– | ATP synthase protein I/– |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1 = | 0 (0.000) | 25 (1.500) | 21/286 | 0.0 | 100% | intergenic (–/+146) | –/parB | –/chromosome‑partitioning protein |
| ? | NC_002947 | = 6183851 | 0 (0.000) | intergenic (‑3/–) | atpI/– | ATP synthase protein I/– | |||||
| * | ? | NC_002947 | 139996 = | 12 (0.720) | 3 (0.190) | 3/276 | 1.8 | 21.0% | coding (508/1782 nt) | kinB | alginate biosynthesis sensor protein KinB |
| ? | NC_002947 | 140016 = | 11 (0.680) | coding (488/1782 nt) | kinB | alginate biosynthesis sensor protein KinB | |||||
| * | ? | NC_002947 | 164102 = | 12 (0.720) | 3 (0.180) | 3/280 | 1.9 | 22.4% | coding (1355/1437 nt) | pntB | pyridine nucleotide transhydrogenase subunit beta |
| ? | NC_002947 | 164137 = | 9 (0.550) | coding (1320/1437 nt) | pntB | pyridine nucleotide transhydrogenase subunit beta | |||||
| * | ? | NC_002947 | 274147 = | 5 (0.300) | 3 (0.180) | 3/282 | 1.9 | 37.7% | coding (423/801 nt) | PP_0221 | methionine ABC transporter substrate‑binding protein |
| ? | NC_002947 | 274172 = | 5 (0.300) | coding (398/801 nt) | PP_0221 | methionine ABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947 | 298218 = | 16 (0.960) | 4 (0.250) | 4/278 | 1.6 | 20.2% | coding (324/384 nt) | PP_0244 | hypothetical protein |
| ? | NC_002947 | 298244 = | 16 (0.990) | coding (298/384 nt) | PP_0244 | hypothetical protein | |||||
| * | ? | NC_002947 | = 353381 | 15 (0.900) | 4 (0.250) | 4/278 | 1.6 | 21.3% | coding (952/1179 nt) | cbcV | choline/betaine/carnitine ABC transporter ATP binding protein |
| ? | NC_002947 | = 353398 | 15 (0.930) | coding (935/1179 nt) | cbcV | choline/betaine/carnitine ABC transporter ATP binding protein | |||||
| * | ? | NC_002947 | 401360 = | 12 (0.720) | 3 (0.200) | 3/260 | 1.7 | 25.1% | coding (943/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | 3970871 = | 7 (0.460) | coding (1033/1179 nt) | PP_3498 | transposase | |||||
| * | ? | NC_002947 | = 413620 | 12 (0.720) | 3 (0.190) | 3/272 | 1.8 | 20.4% | coding (2571/2934 nt) | glnE | glutamate‑ammonia‑ligase adenylyltransferase |
| ? | NC_002947 | = 413635 | 12 (0.760) | coding (2586/2934 nt) | glnE | glutamate‑ammonia‑ligase adenylyltransferase | |||||
| * | ? | NC_002947 | 511871 = | 15 (0.900) | 4 (0.250) | 4/270 | 1.5 | 21.5% | intergenic (+8/‑140) | trpC/PP_0423 | indole‑3‑glycerol phosphate synthase/hypothetical protein |
| ? | NC_002947 | 511893 = | 15 (0.950) | intergenic (+30/‑118) | trpC/PP_0423 | indole‑3‑glycerol phosphate synthase/hypothetical protein | |||||
| * | ? | NC_002947 | = 695669 | 12 (0.720) | 4 (0.250) | 4/270 | 1.5 | 27.3% | coding (87/1494 nt) | mmsA‑I | methylmalonate‑semialdehyde dehydrogenase |
| ? | NC_002947 | = 695687 | 10 (0.640) | coding (105/1494 nt) | mmsA‑I | methylmalonate‑semialdehyde dehydrogenase | |||||
| * | ? | NC_002947 | 732787 = | 1 (0.060) | 3 (0.190) | 3/274 | 1.8 | 75.4% | coding (2324/2565 nt) | clpB | chaperone protein ClpB |
| ? | NC_002947 | 732821 = | 1 (0.060) | coding (2358/2565 nt) | clpB | chaperone protein ClpB | |||||
| * | ? | NC_002947 | = 867921 | 18 (1.080) | 5 (0.310) | 4/280 | 1.6 | 21.0% | intergenic (+16/+161) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| ? | NC_002947 | = 868013 | 20 (1.220) | intergenic (+108/+69) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase | |||||
| * | ? | NC_002947 | = 914215 | 8 (0.480) | 6 (0.380) | 6/274 | 1.1 | 34.6% | coding (923/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
| ? | NC_002947 | = 914241 | 15 (0.940) | coding (949/1743 nt) | fruA | PTS fructose transporter subunit IIBC | |||||
| * | ? | NC_002947 | 1076410 = | 13 (0.780) | 3 (0.190) | 3/274 | 1.8 | 21.9% | intergenic (+4/‑217) | mreB/mreC | cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC |
| ? | NC_002947 | 1076429 = | 9 (0.560) | intergenic (+23/‑198) | mreB/mreC | cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC | |||||
| * | ? | NC_002947 | = 1426821 | NA (NA) | 5 (0.310) | 5/276 | 1.3 | NA | coding (712/1422 nt) | PP_1250 | group II intron‑encoding maturase |
| ? | NC_002947 | = 1426852 | NA (NA) | coding (743/1422 nt) | PP_1250 | group II intron‑encoding maturase | |||||
| * | ? | NC_002947 | 1436025 = | 10 (0.600) | 4 (0.250) | 4/270 | 1.5 | 37.3% | intergenic (‑55/+98) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | 1436102 = | 4 (0.250) | intergenic (‑132/+21) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase | |||||
| * | ? | NC_002947 | = 1526707 | 11 (0.660) | 4 (0.260) | 3/268 | 1.8 | 24.8% | coding (852/957 nt) | ddlB | D‑alanine‑‑D‑alanine ligase B |
| ? | NC_002947 | = 1526720 | 14 (0.900) | coding (865/957 nt) | ddlB | D‑alanine‑‑D‑alanine ligase B | |||||
| * | ? | NC_002947 | 1762884 = | 14 (0.840) | 3 (0.190) | 3/276 | 1.8 | 20.3% | coding (476/477 nt) | PP_1569 | hypothetical protein |
| ? | NC_002947 | 1762915 = | 10 (0.620) | coding (31/342 nt) | PP_1570 | head‑tail adaptor | |||||
| * | ? | NC_002947 | = 1780127 | 2 (0.120) | 8 (0.550) | 7/248 | 0.8 | 77.2% | intergenic (+44/+62) | PP_1587/dapC | NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase |
| ? | NC_002947 | = 1780151 | 3 (0.210) | intergenic (+68/+38) | PP_1587/dapC | NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase | |||||
| * | ? | NC_002947 | 1798642 = | 16 (0.960) | 5 (0.310) | 5/276 | 1.3 | 24.7% | coding (523/1128 nt) | lpxB | lipid‑A‑disaccharide synthase |
| ? | NC_002947 | 1798676 = | 15 (0.930) | coding (557/1128 nt) | lpxB | lipid‑A‑disaccharide synthase | |||||
| * | ? | NC_002947 | 1811061 = | 14 (0.840) | 3 (0.190) | 3/270 | 1.8 | 22.1% | coding (334/708 nt) | ispD | 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase |
| ? | NC_002947 | 1811088 = | 8 (0.510) | coding (361/708 nt) | ispD | 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase | |||||
| * | ? | NC_002947 | = 1821027 | 0 (0.000) | 3 (0.190) | 3/276 | 1.8 | 100% | coding (748/1422 nt) | PP_1624 | group II intron‑encoding maturase |
| ? | NC_002947 | = 2072298 | NA (NA) | coding (707/1422 nt) | PP_1846 | group II intron‑encoding maturase | |||||
| * | ? | NC_002947 | 2050759 = | 8 (0.480) | 4 (0.270) | 3/252 | 1.7 | 44.3% | intergenic (+33/+106) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
| ? | NC_002947 | 2050850 = | 3 (0.200) | intergenic (+124/+15) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 2052560 | 11 (0.660) | 5 (0.400) | 3/212 | 1.4 | 33.2% | intergenic (‑88/+87) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
| ? | NC_002947 | = 2052596 | 12 (0.970) | intergenic (‑124/+51) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 2057943 | 13 (0.780) | 4 (0.270) | 4/254 | 1.4 | 30.1% | intergenic (+27/‑116) | aroC/PP_1831 | chorismate synthase/membrane protein |
| ? | NC_002947 | = 2058017 | 7 (0.470) | intergenic (+101/‑42) | aroC/PP_1831 | chorismate synthase/membrane protein | |||||
| * | ? | NC_002947 | = 2073144 | 11 (0.660) | 4 (0.270) | 4/250 | 1.4 | 29.0% | intergenic (+131/+96) | PP_1846/PP_1847 | group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor |
| ? | NC_002947 | = 2073181 | 10 (0.690) | intergenic (+168/+59) | PP_1846/PP_1847 | group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor | |||||
| * | ? | NC_002947 | = 2088215 | NA (NA) | 3 (0.190) | 3/270 | 1.8 | NA | coding (365/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | = 2088261 | NA (NA) | coding (411/1302 nt) | PP_1865 | transposase | |||||
| * | ? | NC_002947 | 2103478 = | 18 (1.080) | 7 (0.430) +TT |
4/282 | 1.6 | 31.4% | intergenic (+49/+27) | msrC/PP_1878 | free methionine‑(R)‑sulfoxide reductase/hypothetical protein |
| ? | NC_002947 | 4898402 = | 13 (0.780) | intergenic (+68/‑140) | PP_4304/sbp‑I | VIC family cation transporter/sulfate ABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947 | = 2267854 | 15 (0.900) | 4 (0.240) | 3/282 | 1.9 | 21.2% | coding (949/1311 nt) | folC | bifunctional folypolyglutamate synthase/dihydrofolate synthase |
| ? | NC_002947 | = 2267875 | 15 (0.910) | coding (970/1311 nt) | folC | bifunctional folypolyglutamate synthase/dihydrofolate synthase | |||||
| * | ? | NC_002947 | = 2335236 | 14 (0.840) | 4 (0.240) | 4/280 | 1.6 | 22.4% | coding (203/1185 nt) | fadA | 3‑ketoacyl‑CoA thiolase |
| ? | NC_002947 | = 2335264 | 14 (0.860) | coding (231/1185 nt) | fadA | 3‑ketoacyl‑CoA thiolase | |||||
| * | ? | NC_002947 | 2458799 = | 16 (0.960) | 4 (0.290) | 4/234 | 1.3 | 29.5% | intergenic (+85/‑96) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| ? | NC_002947 | 2458863 = | 6 (0.440) | intergenic (+149/‑32) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein | |||||
| * | ? | NC_002947 | = 2685412 | 9 (0.540) | 3 (0.190) | 3/272 | 1.8 | 24.4% | coding (1118/1128 nt) | PP_2352 | hypothetical protein |
| ? | NC_002947 | = 2685422 | 10 (0.630) | coding (1108/1128 nt) | PP_2352 | hypothetical protein | |||||
| * | ? | NC_002947 | = 2693837 | 15 (0.900) | 4 (0.240) | 3/286 | 1.9 | 25.8% | coding (33/534 nt) | PP_2359 | putative Type 1 pili subunit CsuA/B protein |
| ? | NC_002947 | = 2693873 | 8 (0.480) | coding (69/534 nt) | PP_2359 | putative Type 1 pili subunit CsuA/B protein | |||||
| * | ? | NC_002947 | 2703660 = | 9 (0.540) | 3 (0.190) | 3/276 | 1.8 | 26.5% | coding (136/1188 nt) | PP_2367 | transport protein |
| ? | NC_002947 | 2703708 = | 8 (0.500) | coding (88/1188 nt) | PP_2367 | transport protein | |||||
| * | ? | NC_002947 | = 2796887 | 11 (0.660) | 4 (0.260) | 4/260 | 1.4 | 25.0% | intergenic (+30/+82) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
| ? | NC_002947 | = 2796938 | 14 (0.920) | intergenic (+81/+31) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase | |||||
| * | ? | NC_002947 | = 2973193 | 12 (0.720) | 3 (0.190) | 3/272 | 1.8 | 21.1% | coding (1567/2391 nt) | PP_2599 | chemotaxis sensory transducer family protein |
| ? | NC_002947 | = 2973206 | 11 (0.690) | coding (1580/2391 nt) | PP_2599 | chemotaxis sensory transducer family protein | |||||
| * | ? | NC_002947 | 3124809 = | 15 (0.900) | 5 (0.310) | 3/274 | 1.8 | 25.4% | coding (279/888 nt) | PP_2740 | MerR family transcriptional regulator |
| ? | NC_002947 | 3124830 = | 15 (0.940) | coding (300/888 nt) | PP_2740 | MerR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 3637851 | 18 (1.080) | 6 (0.360) | 4/286 | 1.6 | 27.3% | coding (2284/2481 nt) | PP_3202 | transporter |
| ? | NC_002947 | = 3637872 | 14 (0.840) | coding (2305/2481 nt) | PP_3202 | transporter | |||||
| * | ? | NC_002947 | 3773205 = | 5 (0.300) | 3 (0.190) | 3/264 | 1.8 | 38.4% | coding (653/1494 nt) | PP_3331 | membrane protein |
| ? | NC_002947 | 3773238 = | 5 (0.320) | coding (686/1494 nt) | PP_3331 | membrane protein | |||||
| * | ? | NC_002947 | 3903718 = | 17 (1.020) | 5 (0.300) | 3/286 | 1.9 | 22.7% | coding (430/480 nt) | PP_3444 | glyoxalase family protein |
| ? | NC_002947 | 3903739 = | 17 (1.020) | coding (451/480 nt) | PP_3444 | glyoxalase family protein | |||||
| * | ? | NC_002947 | 3949879 = | 7 (0.420) | 3 (0.220) | 3/230 | 1.5 | 36.1% | coding (136/1797 nt) | PP_3483 | type II secretion system protein |
| ? | NC_002947 | 3949964 = | 5 (0.370) | coding (51/1797 nt) | PP_3483 | type II secretion system protein | |||||
| * | ? | NC_002947 | = 3949906 | 8 (0.480) | 3 (0.220) | 3/230 | 1.5 | 34.4% | coding (109/1797 nt) | PP_3483 | type II secretion system protein |
| ? | NC_002947 | = 3949935 | 5 (0.370) | coding (80/1797 nt) | PP_3483 | type II secretion system protein | |||||
| * | ? | NC_002947 | 3953036 = | 10 (0.600) | 3 (0.220) | 3/230 | 1.5 | 31.5% | intergenic (‑34/+161) | PP_3486/PP_3487 | cytochrome c/hypothetical protein |
| ? | NC_002947 | 3953152 = | 5 (0.370) | intergenic (‑150/+45) | PP_3486/PP_3487 | cytochrome c/hypothetical protein | |||||
| * | ? | NC_002947 | 4132612 = | 20 (1.200) | 5 (0.300) | 4/284 | 1.6 | 24.5% | coding (245/687 nt) | PP_3634 | GNAT family acetyltransferase |
| ? | NC_002947 | 4132646 = | 11 (0.660) | coding (279/687 nt) | PP_3634 | GNAT family acetyltransferase | |||||
| * | ? | NC_002947 | 4322733 = | 10 (0.600) | 4 (0.250) | 4/270 | 1.5 | 29.1% | intergenic (‑3/‑415) | PP_3791/PP_5629 | site‑specific recombinase/protease/amidase |
| ? | NC_002947 | 4322760 = | 10 (0.640) | intergenic (‑30/‑388) | PP_3791/PP_5629 | site‑specific recombinase/protease/amidase | |||||
| * | ? | NC_002947 | = 4477967 | 13 (0.780) | 4 (0.250) | 4/272 | 1.5 | 24.4% | coding (251/321 nt) | PP_3966 | transposase |
| ? | NC_002947 | = 4477991 | NA (NA) | coding (227/321 nt) | PP_3966 | transposase | |||||
| * | ? | NC_002947 | = 4535558 | 5 (0.300) | 3 (0.200) | 3/262 | 1.8 | 36.2% | intergenic (+34/‑140) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
| ? | NC_002947 | = 4535597 | 6 (0.390) | intergenic (+73/‑101) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase | |||||
| * | ? | NC_002947 | = 4588022 | 6 (0.360) | 6 (0.490) | 4/210 | 1.1 | 65.2% | intergenic (+139/+78) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| ? | NC_002947 | = 4588050 | 2 (0.160) | intergenic (+167/+50) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase | |||||
| * | ? | NC_002947 | 4649525 = | 12 (0.720) | 6 (0.490) | 5/208 | 0.9 | 50.6% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | 4649633 = | 3 (0.250) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
| * | ? | NC_002947 | 4702712 = | 20 (1.200) | 5 (0.330) | 4/258 | 1.4 | 25.0% | intergenic (‑57/+93) | kdpD/kdpC | sensor protein/potassium‑transporting ATPase subunit C |
| ? | NC_002947 | 4702784 = | 12 (0.800) | intergenic (‑129/+21) | kdpD/kdpC | sensor protein/potassium‑transporting ATPase subunit C | |||||
| * | ? | NC_002947 | 4725869 = | 8 (0.480) | 3 (0.190) | 3/274 | 1.8 | 27.7% | coding (215/483 nt) | yigI | hypothetical protein |
| ? | NC_002947 | 4725900 = | 8 (0.500) | coding (184/483 nt) | yigI | hypothetical protein | |||||
| * | ? | NC_002947 | = 4810146 | 6 (0.360) | 10 (0.660) +CGGCGCTTCGCGG |
7/260 | 0.8 | 50.0% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947 | 4947183 = | 16 (0.960) | intergenic (+576/+222) | PP_5673/flhB | D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein | |||||
| * | ? | NC_002947 | 5212189 = | 13 (0.780) | 5 (0.340) | 3/254 | 1.7 | 30.7% | intergenic (‑85/+93) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase |
| ? | NC_002947 | 5212280 = | 11 (0.740) | intergenic (‑176/+2) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase | |||||
| * | ? | NC_002947 | 5335165 = | 4 (0.240) | 4 (0.270) | 3/256 | 1.7 | 51.3% | intergenic (+27/‑216) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
| ? | NC_002947 | 5335225 = | 4 (0.270) | intergenic (+87/‑156) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein | |||||
| * | ? | NC_002947 | = 5596092 | 6 (0.360) | 7 (0.520) | 5/230 | 1.0 | 61.3% | intergenic (‑66/+79) | PP_4921/thiC | NCS1 family transporter/phosphomethylpyrimidine synthase |
| ? | NC_002947 | = 5596129 | 4 (0.300) | intergenic (‑103/+42) | PP_4921/thiC | NCS1 family transporter/phosphomethylpyrimidine synthase | |||||
| * | ? | NC_002947 | 5639467 = | 10 (0.600) | 3 (0.190) | 3/274 | 1.8 | 21.8% | coding (28/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | 5639485 = | 12 (0.750) | coding (46/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
| * | ? | NC_002947 | = 5806026 | 8 (0.480) | 3 (0.190) | 3/276 | 1.8 | 26.4% | coding (283/537 nt) | pilN | type IV pili biogenesis protein PilN |
| ? | NC_002947 | = 5806044 | 9 (0.560) | coding (265/537 nt) | pilN | type IV pili biogenesis protein PilN | |||||
| * | ? | NC_002947 | = 5905764 | 9 (0.540) | 4 (0.270) | 4/254 | 1.4 | 36.4% | intergenic (+42/+65) | PP_5176/spuH | hypothetical protein/spermidine/putrescine ABC transporter permease |
| ? | NC_002947 | = 5905792 | 6 (0.410) | intergenic (+70/+37) | PP_5176/spuH | hypothetical protein/spermidine/putrescine ABC transporter permease | |||||
| * | ? | NC_002947 | 6029871 = | 9 (0.540) | 6 (0.420) | 6/244 | 0.9 | 43.4% | intergenic (‑37/+74) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
| ? | NC_002947 | 6029928 = | 8 (0.560) | intergenic (‑94/+17) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase | |||||
| * | ? | NC_002947 | = 6029891 | 9 (0.540) | 4 (0.280) | 4/244 | 1.3 | 33.8% | intergenic (‑57/+54) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
| ? | NC_002947 | = 6029906 | 8 (0.560) | intergenic (‑72/+39) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase | |||||
| * | ? | NC_002947 | 6174998 = | 7 (0.420) | 3 (0.180) | 3/284 | 1.9 | 27.3% | coding (62/777 nt) | PP_5410 | DeoR family transcriptional regulator |
| ? | NC_002947 | 6175017 = | 9 (0.540) | coding (43/777 nt) | PP_5410 | DeoR family transcriptional regulator | |||||