mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM260479 | 159,885 | Δ1 bp | coding (149/939 nt) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 160,041 | G→C | G102A (GGG→GCG) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 160,043 | G→C | V103L (GTA→CTA) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 160,050 | +C | coding (314/939 nt) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 208,932 | A→C | H322Q (CAT→CAG) | h16_A0195 ← | Putative GTPase (G3E family) |
| RA | AM260479 | 208,953 | A→C | V315V (GTT→GTG) | h16_A0195 ← | Putative GTPase (G3E family) |
| RA | AM260479 | 245,288 | T→G | L247V (TTG→GTG) | betA2 → | choline dehydrogenase |
| RA | AM260479 | 275,969 | +C | coding (268/558 nt) | h16_A0264 ← | Hypothetical protein |
| RA | AM260479 | 342,407 | T→C | L180L (TTG→CTG) | amtB → | ammonium transporter |
| RA | AM260479 | 406,488 | G→T | L70I (CTC→ATC) | h16_A0388 ← | ABC‑type transporter, ATPase component: HAAT family |
| RA | AM260479 | 452,997 | Δ1 bp | intergenic (‑22/+116) | h16_A0432 ← / ← coxF | Uncharacterized MobA‑related protein/xanthine and CO dehydrogenase, maturation factor |
| RA | AM260479 | 500,512 | G→A | W23* (TGG→TAG) | h16_A0473 → | ABC‑type transporter, permease component: PAAT family |
| RA | AM260479 | 518,612 | G→C | intergenic (+17/‑48) | h16_A0492 → / → pgam2 | Phospholipid‑binding protein/phosphoglycerate mutase 2 protein |
| RA | AM260479 | 547,818 | +C | intergenic (‑10/+27) | glyS ← / ← h16_A0522 | Glycyl‑tRNA synthetase beta subunit/conserved hypothetical protein |
| RA | AM260479 | 547,839 | Δ1 bp | intergenic (‑31/+6) | glyS ← / ← h16_A0522 | Glycyl‑tRNA synthetase beta subunit/conserved hypothetical protein |
| RA | AM260479 | 547,879 | 2 bp→GA | coding (595‑596/630 nt) | h16_A0522 ← | conserved hypothetical protein |
| RA | AM260479 | 561,006 | +G | intergenic (+9/+38) | h16_A0532 → / ← h16_A0533 | conserved hypothetical protein/universal stress protein, UspA family |
| RA | AM260479 | 564,366 | C→G | P73A (CCC→GCC) | h16_A0537 → | Uncharacterized protein conserved in bacteria |
| RA | AM260479 | 581,821 | +C | coding (117/1734 nt) | h16_A0555 → | zinc metalloprotease |
| RA | AM260479 | 582,589 | T→G | H295Q (CAT→CAG) | h16_A0555 → | zinc metalloprotease |
| RA | AM260479 | 582,759 | G→T | C352F (TGT→TTT) | h16_A0555 → | zinc metalloprotease |
| RA | AM260479 | 619,859 | G→T | H108N (CAC→AAC) | acrA1 ← | Cation/multidrug efflux system, mebrane‑fusion component |
| RA | AM260479 | 628,642 | Δ1 bp | coding (756/1206 nt) | h16_A0595 ← | Uncharacterized Fe‑S protein |
| RA | AM260479 | 628,654 | +C | coding (744/1206 nt) | h16_A0595 ← | Uncharacterized Fe‑S protein |
| RA | AM260479 | 637,111 | +G | intergenic (‑164/+218) | adk ← / ← kdsB | adenylate kinase/3‑Deoxy‑manno‑octulosonate cytidylyltransferase |
| RA | AM260479 | 724,768 | +C | coding (82/669 nt) | lysE → | lysine efflux permease |
| RA | AM260479 | 735,524 | +G | intergenic (‑409/+175) | h16_A0685 ← / ← h16_A0686 | hypothetical membrane spanning protein/Predictedpermease/CBS‑domain‑containing membrane protein |
| RA | AM260479 | 782,330 | +G | intergenic (‑680/‑42) | h16_A0723 ← / → h16_A0724 | hypothetical membrane protein/hypothetical membrane protein |
| RA | AM260479 | 782,333 | +A | intergenic (‑683/‑39) | h16_A0723 ← / → h16_A0724 | hypothetical membrane protein/hypothetical membrane protein |
| RA | AM260479 | 787,769 | +T | intergenic (‑549/+743) | h16_A0728 ← / ← h16_A0729 | response regulator containing CheY‑like receiver, AAA‑type ATPase, and DNA‑binding domains/transcriptional regulator, LysR‑family |
| RA | AM260479 | 787,882 | +T | intergenic (‑662/+630) | h16_A0728 ← / ← h16_A0729 | response regulator containing CheY‑like receiver, AAA‑type ATPase, and DNA‑binding domains/transcriptional regulator, LysR‑family |
| RA | AM260479 | 916,512 | T→C | V341A (GTG→GCG) | h16_A0836 → | predicted exporter of the RND superfamily |
| MC JC | AM260479 | 973,838 | Δ1,320 bp | [h16_A0881]–h16_A0882 | [h16_A0881], h16_A0882 | |
| RA | AM260479 | 1,042,407 | T→G | K131N (AAA→AAC) | h16_A0947 ← | Coproporphyrinogen III oxidase, Fe‑S oxidoreductase |
| RA | AM260479 | 1,056,947 | +G | intergenic (+211/‑15) | h16_A0964 → / → h16_A0965 | conserved hypothetical protein/conserved hypothetical protein |
| RA | AM260479 | 1,071,935 | +G | coding (626/627 nt) | h16_A0979 → | Hypothetical protein |
| RA | AM260479 | 1,071,996 | +G | intergenic (+60/‑123) | h16_A0979 → / → h16_A0980 | Hypothetical protein/Hypothetical protein |
| RA | AM260479 | 1,076,499 | C→T | P267L (CCG→CTG) | cpaF3 → | flp pilus assembly ATPase CpaF |
| RA | AM260479 | 1,076,517 | C→T | P273L (CCG→CTG) | cpaF3 → | flp pilus assembly ATPase CpaF |
| RA | AM260479 | 1,081,436 | +C | coding (437/447 nt) | h16_A0989 → | Hypothetical protein |
| RA | AM260479 | 1,081,530 | T→C | L30L (TTG→CTG) | h16_A0990 → | outer membrane protein and related peptidoglycan‑associated (lipo)proteins |
| RA | AM260479 | 1,089,440 | Δ1 bp | intergenic (+115/‑17) | h16_A0996 → / → h16_A0997 | FAD/FMN‑containing dehydrogenase/conserved hypothetical protein |
| RA | AM260479 | 1,112,158 | Δ1 bp | coding (2295/2469 nt) | xdhB1 ← | xanthine dehydrogenase, subunit B |
| RA | AM260479 | 1,167,791 | T→C | intergenic (+238/‑365) | h16_A1070 → / → cyoA1 | acyl dehydratase/bo3‑type quinol oxidase, subunit II |
| RA | AM260479 | 1,191,426 | Δ1 bp | coding (350/390 nt) | h16_A1095 ← | Hypothetical protein |
| RA | AM260479 | 1,191,771 | Δ1 bp | coding (5/390 nt) | h16_A1095 ← | Hypothetical protein |
| RA | AM260479 | 1,231,117 | Δ1 bp | coding (2606/2652 nt) | glnE → | glutamine synthetase adenylyltransferase |
| RA | AM260479 | 1,231,142 | Δ1 bp | coding (2631/2652 nt) | glnE → | glutamine synthetase adenylyltransferase |
| RA | AM260479 | 1,231,143 | C→G | P878A (CCC→GCC) | glnE → | glutamine synthetase adenylyltransferase |
| RA | AM260479 | 1,231,177 | Δ1 bp | intergenic (+14/‑201) | glnE → / → h16_A1128 | glutamine synthetase adenylyltransferase/Membrane protein |
| RA | AM260479 | 1,231,226 | 2 bp→CA | intergenic (+63/‑151) | glnE → / → h16_A1128 | glutamine synthetase adenylyltransferase/Membrane protein |
| RA | AM260479 | 1,240,057 | +T | intergenic (‑57/‑218) | h16_A1136 ← / → grpE | conserved hypothetical protein/molecular chaperone GrpE |
| RA | AM260479 | 1,354,645 | +C | intergenic (+98/‑15) | h16_A1248 → / → h16_A1249 | predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains/Hypothetical protein |
| RA | AM260479 | 1,402,540 | C→G | G893A (GGC→GCC) | h16_A1292 ← | ATP‑dependent transcriptional regulator,MalT‑family |
| RA | AM260479 | 1,464,365 | Δ1 bp | coding (49/552 nt) | h16_A1354 → | conserved hypothetical protein |
| RA | AM260479 | 1,464,433 | A→G | Q39Q (CAA→CAG) | h16_A1354 → | conserved hypothetical protein |
| RA | AM260479 | 1,464,435 | T→C | L40P (CTG→CCG) | h16_A1354 → | conserved hypothetical protein |
| MC JC | AM260479 | 1,464,441 | Δ37 bp | coding (125‑161/552 nt) | h16_A1354 → | conserved hypothetical protein |
| RA | AM260479 | 1,492,923 | T→C | L191L (TTG→CTG) | pdhB → | dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex |
| RA | AM260479 | 1,492,953 | T→G | S201A (TCA→GCA) | pdhB → | dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex |
| RA | AM260479 | 1,493,307 | T→G | F319V (TTC→GTC) | pdhB → | dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex |
| MC JC | AM260479 | 1,714,344 | (CGAAGC)17→9 | coding (1338‑1385/3312 nt) | h16_A1582 → | DNA segregation ATPase FtsK/SpoIIIE related protein |
| RA | AM260479 | 1,744,688 | G→C | G211A (GGC→GCC) | h16_A1608 → | conserved hypothetical protein containing von Willebrand factor (vWF) type A |
| RA | AM260479 | 1,841,200 | +G | intergenic (‑2736/‑2680) | h16_A1684 ← / → ycaC | conserved hypothetical protein/YcaC related amidohydrolase |
| RA | AM260479 | 2,016,501 | T→C | V678V (GTT→GTC) | h16_A1857 → | Uncharacterized protein involved in exopolysaccharide biosynthesis |
| RA | AM260479 | 2,111,013 | +G | coding (553/1089 nt) | h16_A1942 → | Hypothetical protein |
| RA | AM260479 | 2,111,023 | +G | coding (563/1089 nt) | h16_A1942 → | Hypothetical protein |
| RA | AM260479 | 2,253,193 | +C | coding (243/258 nt) | h16_A2071 → | Hypothetical protein |
| RA | AM260479 | 2,274,430 | C→G | G565G (GGG→GGC) | h16_A2092 ← | Lysophospholipase, contains weak SAM‑dependent methyltransferase domain |
| RA | AM260479 | 2,303,559 | A→C | S217R (AGT→AGG) | h16_A2116 ← | Putative DNA polymerase bacteriophage‑type,uracil‑DNA glycosylase superfamily |
| RA | AM260479 | 2,517,378 | T→G | P77A (CCA→GCC) | zntA ← | putative heavy metal transporting P‑type ATPase |
| RA | AM260479 | 2,517,380 | G→C | P77A (CCA→GCC) | zntA ← | putative heavy metal transporting P‑type ATPase |
| RA | AM260479 | 2,517,386 | A→G | Y75H (TAT→CAT) | zntA ← | putative heavy metal transporting P‑type ATPase |
| RA | AM260479 | 2,579,212 | G→C | A121A (GCC→GCG) | h16_A2374 ← | Metallopeptidase, M23B subfamily |
| RA | AM260479 | 2,579,243 | A→G | I111T (ATT→ACT) | h16_A2374 ← | Metallopeptidase, M23B subfamily |
| RA | AM260479 | 2,580,039 | A→G | R155R (CGT→CGC) | h16_A2375 ← | Protein‑L‑isoaspartate carboxylmethyltransferase |
| RA | AM260479 | 2,594,082 | T→C | Q124Q (CAA→CAG) | cR ← | Recombinational DNA repair protein (RecF pathway) |
| RA | AM260479 | 2,594,128 | Δ1 bp | coding (326/957 nt) | cR ← | Recombinational DNA repair protein (RecF pathway) |
| RA | AM260479 | 2,608,803 | T→C | W365R (TGG→CGG) | rho → | transcription termination factor Rho |
| RA | AM260479 | 2,616,505 | C→G | A45G (GCC→GGC) | h16_A2404 → | predicted esterase of the alpha‑beta hydrolase superfamily |
| RA | AM260479 | 2,787,923 | +C | intergenic (+165/‑55) | cafA2 → / → moaA1 | Ribonuclease G and E/molybdopterin biosynthesis protein |
| RA | AM260479 | 2,907,305 | 2 bp→AT | coding (181‑182/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,907,313 | Δ1 bp | coding (189/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,907,329 | Δ1 bp | coding (205/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,907,333 | Δ1 bp | coding (209/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,955,197 | Δ1 bp | coding (1034/1071 nt) | h16_A2735 → | phenylpropionate dioxygenase or related ring‑hydroxylating dioxygenase, large terminal subunit |
| RA | AM260479 | 3,247,959 | 2 bp→CA | coding (723‑724/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,247,987 | Δ1 bp | coding (751/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,247,992 | Δ1 bp | coding (756/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,247,999 | Δ1 bp | coding (763/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,007 | Δ1 bp | coding (771/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,010 | C→G | A258A (GCC→GCG) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,045 | Δ1 bp | coding (809/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,064 | +A | intergenic (+15/‑203) | h16_A3001 → / → hemK1 | transcriptional regulator, LysR‑family/methylase of polypeptide chain release factors |
| RA | AM260479 | 3,248,092 | G→C | intergenic (+43/‑175) | h16_A3001 → / → hemK1 | transcriptional regulator, LysR‑family/methylase of polypeptide chain release factors |
| RA | AM260479 | 3,285,635 | G→C | G181R (GGC→CGC) | nadB → | L‑Aspartate oxidase |
| RA | AM260479 | 3,301,576 | +G | intergenic (+45/‑146) | lspA → / → dfp | lipoprotein signal peptidase II/phosphopantothenoylcysteine synthetase/decarboxylase |
| RA | AM260479 | 3,302,920 | +C | coding (1199/1251 nt) | dfp → | phosphopantothenoylcysteine synthetase/decarboxylase |
| RA | AM260479 | 3,333,763 | +G | coding (5/615 nt) | serB2 → | phosphoserine phosphatase |
| MC JC | AM260479 | 3,399,144 | Δ1,321 bp | [leuS]–h16_A3140 | [leuS], h16_A3140 | |
| RA | AM260479 | 3,403,016 | Δ1 bp | coding (802/996 nt) | phcA ← | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,461,712 | +G | coding (823/969 nt) | h16_A3204 ← | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,515,018 | C→G | noncoding (32/75 nt) | tRNA‑Pro (CGG) → | tRNA‑Pro |
| RA | AM260479 | 3,515,314 | Δ1 bp | intergenic (+253/‑570) | tRNA‑Pro (CGG) → / → pilB | tRNA‑Pro/Type IV pilus assembly protein PilB |
| RA | AM260479 | 3,515,428 | +C | intergenic (+367/‑456) | tRNA‑Pro (CGG) → / → pilB | tRNA‑Pro/Type IV pilus assembly protein PilB |
| RA | AM260479 | 3,529,526 | +G | intergenic (‑40/‑264) | secA ← / → h16_A3265 | preprotein translocase subunit SecA/Hypothetical protein |
| RA | AM260479 | 3,529,607 | +C | intergenic (‑121/‑183) | secA ← / → h16_A3265 | preprotein translocase subunit SecA/Hypothetical protein |
| RA | AM260479 | 3,602,642 | +A | intergenic (‑39/+87) | h16_A3328 ← / ← h16_A3329 | conserved hypothetical membrane protein/unassigned peptidase, M61 subfamily (glycyl aminopeptidase) |
| RA | AM260479 | 3,602,688 | (G)6→5 | intergenic (‑85/+41) | h16_A3328 ← / ← h16_A3329 | conserved hypothetical membrane protein/unassigned peptidase, M61 subfamily (glycyl aminopeptidase) |
| RA | AM260479 | 3,615,716 | +C | intergenic (+42/‑147) | prfA → / → h16_A3341 | protein chain release factor A (RF‑1)/Hypothetical protein |
| RA | AM260479 | 3,615,722 | +A | intergenic (+48/‑141) | prfA → / → h16_A3341 | protein chain release factor A (RF‑1)/Hypothetical protein |
| RA | AM260479 | 3,720,402 | G→T | D170Y (GAC→TAC) | h16_A3441 → | periplasmic multimodular transpeptidase/transglycosylase |
| RA | AM260479 | 3,905,524 | G→C | A1285G (GCC→GGC) | putA ← | bifunctional proline dehydrogenase and proline oxidase |
| RA | AM260479 | 3,972,184 | +C | intergenic (‑136/‑395) | h16_A3682 ← / → h16_A3683 | putative methyltransferase/Hypothetical protein |
| RA | AM260479 | 3,983,831 | C→T | D23N (GAC→AAC) | ntrX ← | response regulator containing a Fis‑type DNA‑binding domain, NtrX |
| RA | AM260479 | 3,998,635 | +C | intergenic (‑221/+527) | h16_A3705 ← / ← h16_A3706 | transcriptional regulator, LysR‑family/conserved hypothetical protein |
| RA | AM260480 | 69,908 | +G | intergenic (+89/‑184) | h16_B0060 → / → h16_B0061 | conserved hypothetical membrane protein/ABC‑type transporter, periplasmic component |
| RA | AM260480 | 153,689 | +G | intergenic (‑67/+93) | h16_B0133 ← / ← h16_B0134 | conserved hypothetical protein/outer membrane protein (porin) |
| RA | AM260480 | 157,096 | +G | intergenic (‑26/+41) | h16_B0136 ← / ← h16_B0137 | cysteine desulfurase/conserved hypothetical membrane protein |
| RA | AM260480 | 159,381 | +G | intergenic (‑13/‑342) | h16_B0138 ← / → h16_B0139 | transcriptional regulator, IclR‑family/conserved hypothetical transmembrane protein |
| RA | AM260480 | 159,389 | +G | intergenic (‑21/‑334) | h16_B0138 ← / → h16_B0139 | transcriptional regulator, IclR‑family/conserved hypothetical transmembrane protein |
| RA | AM260480 | 164,760 | C→T | A15V (GCC→GTC) | acoR → | transcriptional regulator of acetoin catabolism,PspF‑family |
| RA | AM260480 | 274,470 | (G)10→9 | intergenic (+18/‑626) | h16_B0246 → / → fhaB | Hypothetical protein/filamentous hemagglutinin / adhesin |
| RA | AM260480 | 293,407 | T→A | Y759N (TAC→AAC) | flhF → | Flagellar GTP‑binding protein |
| RA | AM260480 | 433,189 | A→C | R133R (CGA→CGC) | h16_B0381 → | Acetyl‑CoA acetyltransferase |
| RA | AM260480 | 507,425 | +A | coding (27/564 nt) | h16_B0448 → | fragment of ABC‑type transport system,periplasmic component: APC family |
| RA | AM260480 | 635,877 | T→C | E259E (GAA→GAG) | fliM ← | flagellar motor switch protein |
| RA | AM260480 | 753,133 | T→C | K37E (AAG→GAG) | h16_B0675 ← | Acyl‑CoA dehydrogenase,short‑chain specific |
| RA | AM260480 | 919,006 | T→G | C159G (TGC→GGC) | h16_B0812 → | hydrolase or acyltransferase (alpha/beta hydrolase superfamily) |
| RA | AM260480 | 951,073 | +G | intergenic (‑29/+230) | h16_B0838 ← / ← h16_B0839 | conserved hypothetical protein/transcriptional regulator, CRP‑family |
| RA | AM260480 | 963,917 | Δ1 bp | intergenic (+84/‑3) | h16_B0849 → / → h16_B0850 | Acyl‑CoA dehydrogenase/Acyl‑CoA dehydrogenase, short‑chain specific |
| RA | AM260480 | 978,518 | A→G | S117G (AGC→GGC) | h16_B0862 → | cytosine deaminase or related metal‑dependent hydrolase |
| RA | AM260480 | 1,166,676 | +G | intergenic (+150/‑109) | h16_B1032 → / → h16_B1033 | conserved hypothetical protein/probable extra‑cytoplasmic solute receptor |
| RA | AM260480 | 1,192,562 | +C | coding (163/594 nt) | cccA → | cytochrome c, mono‑or diheme variant |
| RA | AM260480 | 1,326,746 | +G | intergenic (+47/‑123) | h16_B1172 → / → h16_B1173 | Amidase/MFS transporter |
| RA | AM260480 | 1,326,751 | +G | intergenic (+52/‑118) | h16_B1172 → / → h16_B1173 | Amidase/MFS transporter |
| RA | AM260480 | 1,326,761 | +G | intergenic (+62/‑108) | h16_B1172 → / → h16_B1173 | Amidase/MFS transporter |
| RA | AM260480 | 2,018,102 | +C | intergenic (+111/+98) | h16_B1778 → / ← h16_B1779 | putative peptidase/putative peptidase, S33 family |
| RA | AM260480 | 2,135,859 | +C | intergenic (‑237/‑97) | h16_B1889 ← / → h16_B1890 | transcriptional regulator, IclR‑family/APC transporter, AAT family |
| RA | AM260480 | 2,295,879 | T→A | Q603L (CAG→CTG) | h16_B2042 ← | Hypothetical protein |
| RA | AM260480 | 2,308,233 | (C)5→4 | intergenic (+176/‑161) | h16_B2050 → / → h16_B2051 | response regulator containing a GGDEF effector domain/conserved hypothetical protein |
| RA | AM260480 | 2,431,093 | Δ1 bp | coding (2380/2469 nt) | h16_B2148 → | membrane carboxypeptidase |
| RA | AM260480 | 2,737,499 | A→G | intergenic (‑216/+28) | h16_B2423 ← / ← h16_B2424 | periplasmic solute binding protein/Hypothetical protein |
| RA | AM260480 | 2,737,505 | Δ1 bp | intergenic (‑222/+22) | h16_B2423 ← / ← h16_B2424 | periplasmic solute binding protein/Hypothetical protein |
| RA | AM260480 | 2,737,510 | T→G | intergenic (‑227/+17) | h16_B2423 ← / ← h16_B2424 | periplasmic solute binding protein/Hypothetical protein |
| RA | AM260480 | 2,843,580 | +G | intergenic (‑1/+68) | pip ← / ← h16_B2516 | prolyl aminopeptidase/transcriptional regulator, LysR‑family |
| MC JC | AM260480 | 2,912,452 | Δ39 bp | intergenic (+243/–) | h16_B2579 → / – | cold shock protein, DNA‑binding/– |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AM260479 | 55295 | 55349 | 55 | 4 [2] | [2] 7 | h16_A0040 | predicted membrane protein |
| * | * | ÷ | AM260479 | 89738 | 89777 | 40 | 4 [0] | [2] 4 | h16_A0074 | transcriptional regulator, AraC‑family |
| * | * | ÷ | AM260479 | 156388 | 156440 | 53 | 4 [2] | [2] 5 | [h16_A0142] | [h16_A0142] |
| * | * | ÷ | AM260479 | 159899 | 159977 | 79 | 3 [1] | [2] 4 | h16_A0146 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 254004 | 254058 | 55 | 7 [2] | [2] 3 | h16_A0240 | Acetyltransferase (GNAT) family |
| * | * | ÷ | AM260479 | 381509 | 381654 | 146 | 4 [0] | [2] 4 | ftsY | signal recognition particle receptor FtsY |
| * | * | ÷ | AM260479 | 388498 | 388522 | 25 | 4 [2] | [2] 5 | rfbB1 | dTDP‑D‑glucose 4,6‑dehydratase |
| * | * | ÷ | AM260479 | 442924 | 443007 | 84 | 4 [2] | [1] 3 | h16_A0423 | multidrug resistance efflux pump |
| * | * | ÷ | AM260479 | 522622 | 522702 | 81 | 3 [2] | [1] 3 | ruvB | holliday junction resolvasome, helicase subunit RuvB |
| * | * | ÷ | AM260479 | 570420 | 570486 | 67 | 4 [2] | [1] 3 | h16_A0542/h16_A0543 | signal transduction histidine kinase/response regulator, OmpR‑family |
| * | * | ÷ | AM260479 | 602896 | 602957 | 62 | 3 [1] | [2] 4 | [sua] | [sua] |
| * | * | ÷ | AM260479 | 663334 | 663403 | 70 | 4 [0] | [1] 3 | [h16_A0625] | [h16_A0625] |
| * | * | ÷ | AM260479 | 718124 | 718172 | 49 | 4 [2] | [0] 4 | h16_A0667 | Sodium:sulfate symporter transmembrane region |
| * | * | ÷ | AM260479 | 791412 | 791495 | 84 | 3 [1] | [1] 3 | h16_A0732 | Beta‑propeller domains of methanol dehydrogenase‑type (homolog) |
| * | * | ÷ | AM260479 | 922818 | 922831 | 14 | 4 [2] | [0] 6 | paaJ | 3‑Ketoacyl‑CoA‑thiolase P‑44/SCP2 |
| * | * | ÷ | AM260479 | 1017297 | 1017329 | 33 | 5 [2] | [1] 3 | h16_A0921 | Aerobic‑type carbon monoxide dehydrogenase homolog, small subunit |
| * | * | ÷ | AM260479 | 1085608 | 1085658 | 51 | 4 [2] | [2] 6 | h16_A0994 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 1129272 | 1129358 | 87 | 8 [2] | [2] 4 | h16_A1031 | membrane spanning protein, RDD family |
| * | * | ÷ | AM260479 | 1206095 | 1206155 | 61 | 4 [2] | [1] 3 | h16_A1108 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 1228030 | 1228136 | 107 | 3 [2] | [2] 3 | [h16_A1126] | [h16_A1126] |
| * | * | ÷ | AM260479 | 1234776 | 1234807 | 32 | 4 [2] | [0] 5 | h16_A1131 | ATPase DNA repair |
| * | * | ÷ | AM260479 | 1319163 | 1319214 | 52 | 4 [2] | [2] 3 | h16_A1213/suhB | conserved hypothetical protein/inositol monophosphatase |
| * | * | ÷ | AM260479 | 1349988 | 1350008 | 21 | 4 [1] | [2] 7 | h16_A1245 | ABC‑type transporter, ATPase component: HAAT family |
| * | * | ÷ | AM260479 | 1380848 | 1380906 | 59 | 3 [0] | [2] 4 | h16_A1272 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 1381134 | 1381239 | 106 | 3 [0] | [1] 3 | h16_A1272 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 1402333 | 1402361 | 29 | 3 [0] | [1] 3 | h16_A1291/h16_A1292 | Isovaleryl‑CoA dehydrogenase/ATP‑dependent transcriptional regulator,MalT‑family |
| * | * | ÷ | AM260479 | 1516141 | 1516209 | 69 | 4 [2] | [0] 4 | h16_A1398/h16_A1399 | ABC‑type transporter, permease component/ABC‑type transporter, periplasmic component |
| * | * | ÷ | AM260479 | 1646987 | 1647034 | 48 | 3 [2] | [2] 4 | [h16_A1515] | [h16_A1515] |
| * | * | ÷ | AM260479 | 1723462 | 1723522 | 61 | 10 [2] | [2] 4 | [h16_A1589] | [h16_A1589] |
| * | * | ÷ | AM260479 | 1829135 | 1829160 | 26 | 3 [2] | [2] 3 | h16_A1678 | phage integrase family protein |
| * | * | ÷ | AM260479 | 1953090 | 1953180 | 91 | 3 [2] | [2] 4 | h16_A1789/h16_A1791 | glycerol trinitrate reductase/predicted redox protein, regulator of disulfide bond formation |
| * | * | ÷ | AM260479 | 1993338 | 1993368 | 31 | 3 [2] | [2] 4 | h16_A1831 | Hypothetical protein |
| * | * | ÷ | AM260479 | 2081628 | 2081661 | 34 | 3 [2] | [0] 8 | [h16_A1915] | [h16_A1915] |
| * | * | ÷ | AM260479 | 2154156 | 2154196 | 41 | 3 [2] | [1] 3 | h16_A1978/h16_A1979 | conserved hypothetical protein/conserved hypothetical protein |
| * | * | ÷ | AM260479 | 2208781 | 2208878 | 98 | 3 [2] | [1] 5 | h16_A2032 | hypothetical membrane associated protein |
| * | * | ÷ | AM260479 | 2253282 | 2253328 | 47 | 3 [0] | [2] 3 | h16_A2072 | predicted permease |
| * | * | ÷ | AM260479 | 2318297 | 2318365 | 69 | 3 [1] | [1] 3 | [ttuD2]–[leuB2] | [ttuD2],[leuB2] |
| * | * | ÷ | AM260479 | 2320591 | 2320621 | 31 | 4 [2] | [2] 4 | h16_A2134/h16_A2135 | transcriptional regulator, LysR‑family/response regulator, NarL‑family |
| * | * | ÷ | AM260479 | 2426127 | 2426148 | 22 | 4 [0] | [1] 3 | [lytT] | [lytT] |
| * | * | ÷ | AM260479 | 2463500 | 2463543 | 44 | 4 [2] | [2] 4 | h16_A2268/h16_A2269 | uncharacterized conserved protein/bacterioferritin comigratory protein |
| * | * | ÷ | AM260479 | 2546093 | 2546144 | 52 | 4 [2] | [1] 3 | argAB | acetylglutamate kinase and acetyltransferase |
| * | * | ÷ | AM260479 | 3032747 | 3032773 | 27 | 3 [1] | [2] 3 | h16_A2804 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 3041920 | 3041957 | 38 | 4 [2] | [1] 3 | h16_A2814 | predicted metal‑dependent hydrolase/Putative cyclase |
| * | * | ÷ | AM260479 | 3207534 | 3207585 | 52 | 4 [0] | [1] 3 | cobU | Adenosylcobinamide‑phosphate guanylyltransferase(CobU) |
| * | * | ÷ | AM260479 | 3254089 | 3254114 | 26 | 4 [1] | [2] 4 | h16_A3007/h16_A3008 | Zn‑dependent protease with chaperone function/predicted permease |
| * | * | ÷ | AM260479 | 3301615 | 3301660 | 46 | 3 [2] | [2] 6 | lspA/dfp | lipoprotein signal peptidase II/phosphopantothenoylcysteine synthetase/decarboxylase |
| * | * | ÷ | AM260479 | 3341369 | 3341439 | 71 | 3 [2] | [2] 5 | [h16_A3087] | [h16_A3087] |
| * | * | ÷ | AM260479 | 3365788 | 3365845 | 58 | 3 [2] | [1] 3 | cG | ATP‑dependent DNA helicase |
| * | * | ÷ | AM260479 | 3434032 | 3434167 | 136 | 3 [1] | [2] 4 | h16_A3174 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 3462448 | 3462557 | 110 | 5 [2] | [2] 4 | [h16_A3204] | [h16_A3204] |
| * | * | ÷ | AM260479 | 3472986 | 3473025 | 40 | 5 [1] | [2] 4 | h16_A3218/h16_A3219 | transcriptional regulator, TetR/AcrR‑family/Hypothetical protein |
| * | * | ÷ | AM260479 | 3482460 | 3482521 | 62 | 4 [2] | [2] 4 | h16_A3225/h16_A3226 | ABC‑type transporter, ATPase and permease components/Hypothetical protein |
| * | * | ÷ | AM260479 | 3554454 | 3554526 | 73 | 3 [2] | [2] 4 | h16_A3287 | Hypothetical protein |
| * | * | ÷ | AM260479 | 3623523 | 3623582 | 60 | 3 [1] | [2] 3 | h16_A3349 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 3722896 | 3722994 | 99 | 4 [2] | [2] 3 | h16_A3442/lysA2 | protein implicated in iron transport, frataxin homolog/diaminopimelate decarboxylase |
| * | * | ÷ | AM260479 | 3857083 | 3857130 | 48 | 4 [2] | [2] 4 | h16_A3590 | C4‑dicarboxylate transport protein |
| * | * | ÷ | AM260479 | 3871564 | 3871596 | 33 | 3 [0] | [0] 3 | pyk2/h16_A3603 | pyruvate kinase/putative neutral zinc metallopeptidase |
| * | * | ÷ | AM260479 | 3909958 | 3910047 | 90 | 5 [2] | [1] 3 | priA | Primosomal protein N' |
| * | * | ÷ | AM260479 | 4037839 | 4037940 | 102 | 5 [1] | [1] 3 | h16_A3734 | conserved hypothetical protein |
| * | * | ÷ | AM260480 | 145089 | 145109 | 21 | 7 [1] | [0] 8 | h16_B0127 | glucarate dehydratase |
| * | * | ÷ | AM260480 | 174655–175127 | 179995–175130 | 4–5341 | 4 [1] | [2] 4 | rrsD–[rrfD] | rrsD,tRNA‑Ile (GAT),tRNA‑Ala (TGC),rrlD,[rrfD] |
| * | * | ÷ | AM260480 | 186154 | 186183 | 30 | 4 [2] | [2] 4 | h16_B0163 | Transglutaminase‑like enzyme, putative cysteine protease |
| * | * | ÷ | AM260480 | 193569 | 193619 | 51 | 4 [1] | [2] 4 | h16_B0168 | putative multidrug resistance protein |
| * | * | ÷ | AM260480 | 334549 | 334567 | 19 | 4 [2] | [0] 3 | h16_B0298/h16_B0299 | transcriptional regulator, LysR‑family/putative glucose/sorbosone dehydrogenase |
| * | * | ÷ | AM260480 | 496915 | 496943 | 29 | 4 [2] | [1] 3 | nhaA | Na+/H+ antiporter 1 |
| * | * | ÷ | AM260480 | 633601 | 633683 | 83 | 7 [2] | [2] 3 | [fliQ] | [fliQ] |
| * | * | ÷ | AM260480 | 686587 | 686628 | 42 | 3 [2] | [0] 8 | h16_B0616 | predicted acyl‑CoA transferase/carnitine dehydratase |
| * | * | ÷ | AM260480 | 752007 | 752046 | 40 | 3 [2] | [2] 4 | h16_B0674/h16_B0675 | conserved hypothetical protein/Acyl‑CoA dehydrogenase,short‑chain specific |
| * | * | ÷ | AM260480 | 757291 | 757355 | 65 | 4 [2] | [1] 3 | [h16_B0678] | [h16_B0678] |
| * | * | ÷ | AM260480 | 867733–869613 | 872729–869620 | 8–4997 | 4 [1] | [2] 3 | [rrsE]–[rrfE] | [rrsE],tRNA‑Ile (GAT),tRNA‑Ala (TGC),rrlE,[rrfE] |
| * | * | ÷ | AM260480 | 1208393 | 1208494 | 102 | 3 [2] | [1] 3 | h16_B1068 | conserved hypothetical protein |
| * | * | ÷ | AM260480 | 1222279 | 1222299 | 21 | 3 [2] | [0] 6 | h16_B1080/tyrB2 | Hypothetical protein/tyrosine aminotransferase |
| * | * | ÷ | AM260480 | 1319227 | 1319264 | 38 | 4 [2] | [2] 6 | h16_B1167/h16_B1168 | Hypothetical protein/conserved hypothetical protein |
| * | * | ÷ | AM260480 | 1416930 | 1416983 | 54 | 4 [0] | [2] 8 | h16_B1257 | Hypothetical protein |
| * | * | ÷ | AM260480 | 1465497 | 1465536 | 40 | 4 [2] | [2] 4 | h16_B1311 | Hypothetical protein |
| * | * | ÷ | AM260480 | 1482245 | 1482330 | 86 | 6 [2] | [2] 3 | [h16_B1335] | [h16_B1335] |
| * | * | ÷ | AM260480 | 1564009 | 1564060 | 52 | 3 [2] | [2] 3 | [cbbR] | [cbbR] |
| * | * | ÷ | AM260480 | 1632945 | 1633011 | 67 | 3 [2] | [1] 5 | [h16_B1458] | [h16_B1458] |
| * | * | ÷ | AM260480 | 1748458 | 1748530 | 73 | 3 [0] | [1] 3 | h16_B1557 | Glycosidase‑like protein |
| * | * | ÷ | AM260480 | 1808126 | 1808175 | 50 | 3 [2] | [2] 4 | h16_B1604 | predicted phosphohydrolase |
| * | * | ÷ | AM260480 | 2139674 | 2139695 | 22 | 4 [2] | [2] 4 | dadA7 | D‑amino‑acid dehydrogenase |
| * | * | ÷ | AM260480 | 2193428 | 2193446 | 19 | 4 [2] | [1] 3 | h16_B1944/gdhA2 | putative hydrolase/glutamate dehydrogenase [NAD(P)+] |
| * | * | ÷ | AM260480 | 2459872 | 2459902 | 31 | 4 [2] | [1] 4 | h16_B2171 | Glycosyltransferase, probably involved in cell wall biogenesis |
| * | * | ÷ | AM260480 | 2532182 | 2532220 | 39 | 3 [2] | [2] 3 | bkdA1 | 2‑Oxoisovalerate dehydrogenase E1 component,alpha subunit |
| * | * | ÷ | AM260480 | 2608843 | 2608896 | 54 | 3 [2] | [2] 4 | [h16_B2307] | [h16_B2307] |
| * | * | ÷ | AM260480 | 2866434 | 2866463 | 30 | 4 [2] | [0] 4 | h16_B2539 | conserved hypothetical protein |
| * | * | ÷ | AY305378 | 1 | 40564–39353 | 39353–40564 | NA [0] | [3] 4 | hoxK–[PHG043] | hoxK,hoxG,hoxZ,PHG004,hoxM,hoxL,hoxO,hoxQ,hoxR,hoxT,hoxV,hypA1,hypB1,hypF1,hypC1,hypD1,hypE1,hypX,hoxA,hoxB,hoxC,hoxJ,hoxN1,PHG027,PHG028,PHG029,PHG030,PHG031,PHG032,PHG033,PHG034,PHG035,PHG036,PHG037,PHG038,PHG039,PHG040,PHG041,[PHG042],[PHG043] |
| * | * | ÷ | AY305378 | 85312 | 85346 | 35 | 5 [0] | [3] 5 | [hoxI] | [hoxI] |
| * | * | ÷ | AY305378 | 99908 | 99967 | 60 | 5 [3] | [2] 4 | kfrA1 | putative KfrA protein |
| * | * | ÷ | AY305378 | 156301 | 156329 | 29 | 5 [2] | [2] 4 | kfrA2 | putative KfrA‑like protein |
| * | * | ÷ | AY305378 | 156555 | 156889 | 335 | 4 [2] | [3] 5 | [kfrA2]–[PHG157] | [kfrA2],[PHG157] |
| * | * | ÷ | AY305378 | 445951 | 452156 | 6206 | 29 [0] | [0] NA | cbbEp–cbbLp | cbbEp,cbbYp,cbbXp,cbbSp,cbbLp |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 192881 | 12 (0.440) | 4 (0.160) | 4/192 | 2.0 | 25.1% | coding (150/1503 nt) | bioA | Adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| ? | AM260479 | = 192904 | 13 (0.530) | coding (173/1503 nt) | bioA | Adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase | |||||
| * | ? | AM260479 | = 286484 | 16 (0.590) | 4 (0.160) | 3/198 | 2.3 | 20.5% | intergenic (+6/+1) | h16_A0274/h16_A0275 | lactoylglutathione lyase/transcriptional regulator, AraC‑family |
| ? | AM260479 | = 286489 | 16 (0.630) | coding (974/978 nt) | h16_A0275 | transcriptional regulator, AraC‑family | |||||
| * | ? | AM260479 | 370871 = | 8 (0.290) | 3 (0.120) | 3/196 | 2.3 | 26.8% | coding (41/621 nt) | sco2 | cytochrome oxidase assembly protein, Sco1/SenC family |
| ? | AM260479 | 370971 = | 9 (0.360) | coding (141/621 nt) | sco2 | cytochrome oxidase assembly protein, Sco1/SenC family | |||||
| * | ? | AM260479 | = 560221 | 12 (0.440) | 4 (0.160) | 3/198 | 2.3 | 27.4% | coding (271/1047 nt) | h16_A0532 | conserved hypothetical protein |
| ? | AM260479 | = 560248 | 10 (0.390) | coding (298/1047 nt) | h16_A0532 | conserved hypothetical protein | |||||
| * | ? | AM260479 | = 675911 | 24 (0.880) | 7 (0.300) | 7/184 | 1.3 | 26.0% | coding (186/705 nt) | h16_A0635 | Uracil‑DNA glycosylase |
| ? | AM260479 | = 675897 | 19 (0.810) | coding (200/705 nt) | h16_A0635 | Uracil‑DNA glycosylase | |||||
| * | ? | AM260479 | = 741813 | 16 (0.590) | 4 (0.190) | 4/168 | 1.8 | 23.1% | coding (231/1320 nt) | gltR2 | response regulator of C4‑dicarboxylate transportsystem |
| ? | AM260479 | = 741791 | 14 (0.650) | coding (253/1320 nt) | gltR2 | response regulator of C4‑dicarboxylate transportsystem | |||||
| * | ? | AM260479 | = 1088373 | 15 (0.550) | 4 (0.160) | 4/198 | 2.0 | 24.2% | coding (437/1389 nt) | h16_A0996 | FAD/FMN‑containing dehydrogenase |
| ? | AM260479 | = 1088441 | 11 (0.430) | coding (505/1389 nt) | h16_A0996 | FAD/FMN‑containing dehydrogenase | |||||
| * | ? | AM260479 | 1095348 = | 18 (0.660) | 4 (0.160) | 4/192 | 2.0 | 20.9% | coding (312/624 nt) | h16_A1001 | conserved hypothetical protein |
| ? | AM260479 | 1095391 = | 14 (0.570) | coding (355/624 nt) | h16_A1001 | conserved hypothetical protein | |||||
| * | ? | AM260479 | = 1813058 | 25 (0.920) | 5 (0.260) +32 bp |
3/148 | 1.8 | 22.3% | coding (333/453 nt) | h16_A1665 | predicted redox protein, regulator of disulfide‑bond formation |
| ? | AM260479 | 1813091 = | 25 (0.920) | coding (300/453 nt) | h16_A1665 | predicted redox protein, regulator of disulfide‑bond formation | |||||
| * | ? | AM260479 | 1871750 = | NA (NA) | 6 (0.240) | 6/198 | 1.6 | NA | coding (264/939 nt) | apbA1 | ketopantoate reductase |
| ? | AM260479 | 1871767 = | NA (NA) | coding (281/939 nt) | apbA1 | ketopantoate reductase | |||||
| * | ? | AM260479 | 2105186 = | 17 (0.630) | 4 (0.170) | 4/186 | 1.9 | 25.1% | coding (1459/1497 nt) | mtlD | mannitol dehydrogenase |
| ? | AM260479 | 2105220 = | 9 (0.380) | coding (1493/1497 nt) | mtlD | mannitol dehydrogenase | |||||
| * | ? | AM260479 | = 2193765 | 14 (0.520) | 6 (0.240) | 3/196 | 2.3 | 26.1% | coding (502/831 nt) | h16_A2021 | universal stress protein, UspA family |
| ? | AM260479 | = 2193810 | 21 (0.840) | coding (457/831 nt) | h16_A2021 | universal stress protein, UspA family | |||||
| * | ? | AM260479 | 2217992 = | 16 (0.590) | 4 (0.170) | 4/184 | 1.9 | 22.3% | coding (598/1209 nt) | lpxB | Lipid‑A‑disaccharide synthase |
| ? | AM260479 | 2218006 = | 14 (0.590) | coding (584/1209 nt) | lpxB | Lipid‑A‑disaccharide synthase | |||||
| * | ? | AM260479 | = 2362250 | 16 (0.590) | 4 (0.160) | 3/194 | 2.3 | 22.4% | coding (468/918 nt) | h16_A2169 | transcriptional regulator, LysR‑family |
| ? | AM260479 | = 2362272 | 13 (0.520) | coding (446/918 nt) | h16_A2169 | transcriptional regulator, LysR‑family | |||||
| * | ? | AM260479 | 2455228 = | 15 (0.550) | 3 (0.120) | 3/196 | 2.3 | 20.1% | coding (48/909 nt) | h16_A2260 | predicted hydrolase or acyltransferase |
| ? | AM260479 | 2455267 = | 10 (0.400) | coding (87/909 nt) | h16_A2260 | predicted hydrolase or acyltransferase | |||||
| * | ? | AM260479 | 2605709 = | 12 (0.440) | 3 (0.130) | 3/180 | 2.2 | 22.9% | coding (594/2868 nt) | addB | two domain protein: Inactivated superfamily I helicase and RecB family exonuclease |
| ? | AM260479 | 2605725 = | 10 (0.430) | coding (578/2868 nt) | addB | two domain protein: Inactivated superfamily I helicase and RecB family exonuclease | |||||
| * | ? | AM260479 | 3548678 = | 13 (0.480) | 8 (0.310) | 6/204 | 1.6 | 35.2% | coding (843/1002 nt) | h16_A3281 | conserved hypothetical protein |
| ? | AM260479 | 3548702 = | 17 (0.650) | coding (819/1002 nt) | h16_A3281 | conserved hypothetical protein | |||||
| * | ? | AM260479 | 3703449 = | 19 (0.700) | 7 (0.280) | 7/196 | 1.4 | 27.2% | coding (417/540 nt) | h16_A3429 | Hypothetical protein |
| ? | AM260479 | 3703537 = | 20 (0.800) | coding (505/540 nt) | h16_A3429 | Hypothetical protein | |||||
| * | ? | AM260479 | 3756841 = | 17 (0.630) | 4 (0.160) | 4/198 | 2.0 | 20.6% | coding (277/1230 nt) | h16_A3488 | dienelactone hydrolase or related enzyme |
| ? | AM260479 | 3756900 = | 15 (0.590) | coding (218/1230 nt) | h16_A3488 | dienelactone hydrolase or related enzyme | |||||
| * | ? | AM260479 | = 3801778 | 17 (0.630) | 6 (0.240) | 6/192 | 1.5 | 21.7% | coding (163/699 nt) | h16_A3529 | Acetyltransferase |
| ? | AM260479 | = 3801935 | 28 (1.140) | coding (320/699 nt) | h16_A3529 | Acetyltransferase | |||||
| * | ? | AM260480 | 202081 = | 24 (0.840) | 5 (0.220) | 5/172 | 1.6 | 23.0% | coding (583/1668 nt) | h16_B0178 | hemolysin activation/secretion protein |
| ? | AM260480 | 202101 = | 14 (0.610) | coding (563/1668 nt) | h16_B0178 | hemolysin activation/secretion protein | |||||
| * | ? | AM260480 | 588488 = | 17 (0.600) | 4 (0.150) | 4/198 | 2.1 | 25.9% | coding (238/741 nt) | h16_B0521 | conserved hypothetical protein |
| ? | AM260480 | 588510 = | 7 (0.260) | coding (216/741 nt) | h16_B0521 | conserved hypothetical protein | |||||
| * | ? | AM260480 | = 668127 | 16 (0.560) | 4 (0.160) | 4/188 | 2.1 | 20.9% | coding (662/1026 nt) | bpHI | 4‑Hydroxy‑2‑oxovalerate aldolase |
| ? | AM260480 | = 668115 | 16 (0.640) | coding (674/1026 nt) | bpHI | 4‑Hydroxy‑2‑oxovalerate aldolase | |||||
| * | ? | AM260480 | 709929 = | 15 (0.530) | 5 (0.190) | 5/192 | 1.8 | 24.6% | coding (978/1185 nt) | h16_B0635 | transcriptional regulator, LuxR‑family |
| ? | AM260480 | 709973 = | 17 (0.660) | coding (1022/1185 nt) | h16_B0635 | transcriptional regulator, LuxR‑family | |||||
| * | ? | AM260480 | 891285 = | 15 (0.530) | 5 (0.190) | 3/194 | 2.4 | 25.8% | coding (871/1824 nt) | h16_B0787 | outer membrane efflux protein |
| ? | AM260480 | 891325 = | 15 (0.580) | coding (831/1824 nt) | h16_B0787 | outer membrane efflux protein | |||||
| * | ? | AM260480 | 1047080 = | 11 (0.390) | 4 (0.150) | 4/194 | 2.1 | 27.5% | coding (714/1317 nt) | h16_B0926 | conserved hypothetical protein |
| ? | AM260480 | 1047247 = | 11 (0.420) | coding (547/1317 nt) | h16_B0926 | conserved hypothetical protein | |||||
| * | ? | AM260480 | = 1643113 | 8 (0.280) | 3 (0.120) | 3/190 | 2.4 | 22.9% | coding (1782/2094 nt) | h16_B1463 | fusaric acid resistance efflux transporter,permease protein |
| ? | AM260480 | = 1643176 | 13 (0.510) | coding (1845/2094 nt) | h16_B1463 | fusaric acid resistance efflux transporter,permease protein | |||||
| * | ? | AM260480 | = 1755368 | 9 (0.320) | 3 (0.110) | 3/196 | 2.4 | 25.7% | coding (1181/2235 nt) | pulA | Type II secretory pathway, pullulanase PulA |
| ? | AM260480 | = 1755387 | 9 (0.340) | coding (1200/2235 nt) | pulA | Type II secretory pathway, pullulanase PulA | |||||
| * | ? | AM260480 | = 2106126 | 9 (0.320) | 4 (0.150) | 4/196 | 2.1 | 28.2% | coding (1385/1623 nt) | h16_B1862 | Rhodanese‑related sulfurtransferase |
| ? | AM260480 | = 2106180 | 12 (0.460) | coding (1331/1623 nt) | h16_B1862 | Rhodanese‑related sulfurtransferase | |||||
| * | ? | AM260480 | 2434179 = | 14 (0.490) | 4 (0.150) | 4/204 | 2.2 | 21.9% | coding (68/1587 nt) | h16_B2150 | conserved hypothetical protein |
| ? | AM260480 | 2434216 = | 15 (0.550) | coding (31/1587 nt) | h16_B2150 | conserved hypothetical protein | |||||
| * | ? | AM260480 | = 2512516 | 15 (0.530) | 4 (0.150) | 4/196 | 2.1 | 21.7% | coding (171/1254 nt) | h16_B2212 | conserved hypothetical protein |
| ? | AM260480 | = 2512524 | 15 (0.570) | coding (163/1254 nt) | h16_B2212 | conserved hypothetical protein | |||||
| * | ? | AM260480 | = 2876814 | 10 (0.350) | 4 (0.150) +GACCGGCTA |
4/194 | 2.1 | 28.4% | coding (455/501 nt) | ogt | Methylated‑DNA‑[protein]‑cysteine S‑methyltransferase |
| ? | AM260480 | 2876848 = | 12 (0.420) | coding (421/501 nt) | ogt | Methylated‑DNA‑[protein]‑cysteine S‑methyltransferase | |||||
| * | ? | AY305378 | = 94337 | NA (NA) | 29 (1.070) | 23/208 | 0.1 | 100% | noncoding (1313/1313 nt) | ISAE1 | repeat region |
| ? | AY305378 | = 445950 | 0 (0.000) | intergenic (‑20/+31) | cbbFp/cbbEp | fructose‑1,6‑bisphosphate/ribulose‑5‑phosphate 3‑epimerase | |||||