breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
RA | 10,865 | A→C | G164G (GGT→GGG) | msyB ← | acidic protein MsyB |
RA | 37,396 | T→C | A143A (GCA→GCG) | caiC ← | crotonobetaine/carnitine‑CoA ligase |
RA | 37,524 | T→G | S101R (AGC→CGC) | caiC ← | crotonobetaine/carnitine‑CoA ligase |
RA | 49,765 | C→T | intergenic (+134/‑58) | kefC → / → folA | glutathione‑regulated potassium‑efflux system protein KefC/type 3 dihydrofolate reductase |
RA | 49,898 | G→A | A26T (GCC→ACC) | folA → | type 3 dihydrofolate reductase |
RA | 49,910 | T→G | W30G (TGG→GGG) | folA → | type 3 dihydrofolate reductase |
RA | 59,627 | C→A | intergenic (‑153/+60) | BW25113_RS25400 ← / ← rluA | transposase/bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA |
RA | 63,109 | G→T | R52R (CGC→CGA) | rapA ← | RNA polymerase‑associated protein RapA |
RA | 75,122 | G→A | A339T (GCA→ACA) | setA → | sugar efflux transporter SetA |
RA | 77,241 | T→G | S37S (TCA→TCC) | leuC ← | 3‑isopropylmalate dehydratase large subunit |
RA | 97,990 | A→C | T247P (ACC→CCC) | murC → | UDP‑N‑acetylmuramate‑‑L‑alanine ligase |
RA | 115,634 | Δ1 bp | coding (415/552 nt) | ampD → | 1,6‑anhydro‑N‑acetylmuramyl‑L‑alanine amidase AmpD |
RA | 176,910 | T→C | V396A (GTC→GCC) | dgt → | dGTPase |
RA | 232,843 | T→C | I97T (ATC→ACC) | dnaQ → | DNA polymerase III subunit epsilon |
RA | 297,613 | (C)5→6 | coding (672/690 nt) | paoA ← | aldehyde dehydrogenase iron‑sulfur subunit |
RA | 303,602 | T→G | N481T (AAC→ACC) | ecpC ← | fimbrial usher EcpC |
RA | 338,646 | A→T | M18L (ATG→TTG) | yahK → | NADPH‑dependent aldehyde reductase YahK |
RA | 351,491 | T→G | S287A (TCG→GCG) | codB → | cytosine permease |
RA | 384,326 | A→C | G286G (GGT→GGG) | hemB ← | porphobilinogen synthase |
RA | 393,907 | A→G | K194E (AAA→GAA) | yaiW → | surface‑exposed outer membrane lipoprotein YaiW |
RA | 415,362 | T→C | S106P (TCC→CCC) | brnQ → | branched‑chain amino acid transporter carrier protein BrnQ |
RA | 438,112 | A→G | S370G (AGC→GGC) | thiI → | tRNA 4‑thiouridine(8) synthase ThiI |
RA | 441,095 | T→C | Y343C (TAC→TGC) | yajR ← | MFS transporter |
RA | 446,387 | T→C | D227G (GAT→GGT) | cyoA ← | cytochrome o ubiquinol oxidase subunit II |
RA | 467,406 | Δ1 bp | coding (1315/1782 nt) | mdlB → | SmdB family multidrug efflux ABC transporter permease/ATP‑binding protein |
RA | 478,146 | A→C | F572V (TTT→GTT) | acrB ← | efflux RND transporter permease AcrB |
RA | 525,225 | A→G | pseudogene (248/366 nt) | ylbG ← | helix‑turn‑helix domain‑containing protein |
RA | 535,507 | A→G | E302G (GAA→GGA) | allB → | allantoinase AllB |
RA | 557,194 | A→G | Q681R (CAG→CGG) | sfmD → | fimbrial biogenesis usher protein |
RA | 583,595 | A→G | V939A (GTC→GCC) | nfrA ← | bacteriophage adsorption protein NfrA |
RA | 609,496 | A→C | L33F (TTA→TTC) | ybdZ → | enterobactin biosynthesis protein YbdZ |
RA | 625,777 | A→G | D143G (GAC→GGC) | cstA → | pyruvate/proton symporter CstA |
RA | 634,370 | A→C | intergenic (‑341/‑31) | dsbG ← / → ahpC | thiol:disulfide interchange protein DsbG/alkyl hydroperoxide reductase subunit C |
RA | 645,191 | A→G | D252D (GAT→GAC) | citE ← | citrate (pro‑3S)‑lyase subunit beta |
RA | 659,797 | A→C | S284A (TCG→GCG) | rlpA ← | endolytic peptidoglycan transglycosylase RlpA |
RA | 724,034 | A→C | V52G (GTC→GGC) | kdpA ← | potassium‑transporting ATPase subunit KdpA |
RA | 771,407 | A→G | T35A (ACA→GCA) | tolR → | colicin uptake protein TolR |
RA | 788,865 | +G | coding (380/1473 nt) | modF ← | molybdate ABC transporter ATP‑binding protein ModF |
RA | 792,028 | (T)5→4 | coding (19/1059 nt) | modC → | molybdenum ABC transporter ATP‑binding protein ModC |
RA | 859,589 | A→G | A164A (GCA→GCG) | fsa → | fructose‑6‑phosphate aldolase |
RA | 923,620 | A→G | V344V (GTT→GTC) | cydC ← | cysteine/glutathione ABC transporter ATP‑binding protein/permease CydC |
RA | 945,384 | (T)5→4 | coding (261/591 nt) | ycaK → | NAD(P)H oxidoreductase |
RA | 945,548 | A→G | E142G (GAA→GGA) | ycaK → | NAD(P)H oxidoreductase |
RA | 966,040 | A→G | D399G (GAT→GGT) | ycaQ → | winged helix DNA‑binding protein YcaQ |
RA | 1,015,913 | T→G | T155P (ACG→CCG) | sulA ← | cell division inhibitor SulA |
RA | 1,032,221 | T→C | F6S (TTC→TCC) | hyaF → | hydrogenase expression/formation protein |
RA | 1,035,547 | A→G | I266V (ATC→GTC) | appB → | cytochrome d ubiquinol oxidase subunit II |
RA | 1,036,585 | A→G | G171G (GGA→GGG) | appA → | bifunctional acid phosphatase/4‑phytase |
RA | 1,060,660 | T→C | L390P (CTC→CCC) | yccE → | YccE family protein |
RA | 1,103,672 | C→T | T242T (ACG→ACA) | mdoC ← | glucans biosynthesis protein MdoC |
RA | 1,143,854 | A→G | K260E (AAA→GAA) | plsX → | phosphate acyltransferase PlsX |
RA | 1,188,709 | (T)5→4 | coding (521/1107 nt) | mnmA ← | tRNA 2‑thiouridine(34) synthase MnmA |
RA | 1,199,449 | A→C | intergenic (+168/‑8) | ymfL → / → BW25113_RS23635 | protein YmfL/DUF4222 domain‑containing protein |
RA | 1,276,082 | T→G | S255A (TCA→GCA) | narG → | nitrate reductase subunit alpha |
RA | 1,312,468 | T→C | T69A (ACG→GCG) | trpB ← | tryptophan synthase subunit beta |
RA | 1,314,400 | C→T | A414A (GCG→GCA) | trpD ← | bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD |
RA | 1,322,413 | T→G | T68P (ACC→CCC) | cobO ← | cob(I)yrinic acid a,c‑diamide adenosyltransferase |
RA | 1,433,342 | A→G | F567S (TTC→TCC) | nifJ ← | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
RA | 1,444,183 | T→G | Q475P (CAG→CCG) | tynA ← | primary‑amine oxidase |
RA | 1,517,271 | A→G | S18P (TCC→CCC) | yncD ← | TonB‑dependent receptor |
RA | 1,551,828 | T→G | A156A (GCA→GCC) | ddpF ← | ABC transporter ATP‑binding protein |
RA | 1,575,074 | A→G | intergenic (‑27/+25) | ydeM ← / ← ydeN | anaerobic sulfatase maturase/sulfatase |
RA | 1,616,325 | T→C | V246A (GTC→GCC) | ydeE → | efflux MFS transporter YdeE |
RA | 1,623,234 | A→G | E209G (GAA→GGA) | ydfH → | DNA‑binding transcriptional regulator rspR |
RA | 1,624,590 | T→C | D194G (GAC→GGC) | ydfI ← | mannitol dehydrogenase family protein |
RA | 1,632,424 | (A)7→6 | intergenic (‑58/+21) | BW25113_RS08135 ← / ← BW25113_RS25620 | hypothetical protein/hypothetical protein |
RA | 1,678,263 | C→T | R375R (CGC→CGT) | rstB → | two‑component system sensor histidine kinase RstB |
RA | 1,679,189 | A→G | N225S (AAC→AGC) | tus → | DNA replication terminus site‑binding protein |
RA | 1,690,676 | A→C | intergenic (‑348/+43) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
RA | 1,695,442 | T→G | F77V (TTT→GTT) | malY → | bifunctional maltose regulon transcriptional repressor/cystathionine beta‑lyase MalY |
RA | 1,703,908 | T→G | G170G (GGT→GGG) | rsxD → | electron transport complex subunit RsxD |
RA | 1,734,422 | T→C | S85S (AGT→AGC) | punC → | purine nucleoside transporter PunC |
RA | 1,747,881 | A→C | G97G (GGT→GGG) | ydhV ← | aldehyde ferredoxin oxidoreductase |
RA | 1,776,120 | A→G | I157V (ATT→GTT) | ydiS → | FAD‑dependent oxidoreductase |
RA | 1,806,054 | T→C | S288S (AGT→AGC) | tcyP → | cystine/sulfocysteine:cation symporter |
RA | 1,809,486 | A→C | T455P (ACT→CCT) | katE → | catalase HPII |
RA | 1,819,028 | T→C | E56G (GAA→GGA) | ves ← | environmental stress‑induced protein Ves |
RA | 1,826,720 | C→A | R12R (CGC→CGA) | xthA → | exodeoxyribonuclease III |
RA | 1,848,241 | T→G | intergenic (‑5/+112) | ydjE ← / ← ydjF | MFS transporter/DeoR/GlpR family DNA‑binding transcription regulator |
RA | 1,865,194 | A→C | N185H (AAC→CAC) | cdgI → | GGDEF domain‑containing protein |
RA | 1,882,935 | A→C | Y357D (TAT→GAT) | fadD ← | long‑chain‑fatty‑acid‑‑CoA ligase FadD |
RA | 1,913,668 | C→A | G634G (GGC→GGA) | yebT → | lipid‑binding membrane homeostasis protein YebT |
RA | 1,919,822 | T→C | F42F (TTT→TTC) | yobB → | carbon‑nitrogen hydrolase family protein |
RA | 1,948,189 | T→G | V164G (GTG→GGG) | cmoB → | tRNA 5‑methoxyuridine(34)/uridine 5‑oxyacetic acid(34) synthase CmoB |
RA | 1,976,083 | T→G | A313A (GCA→GCC) | araH ← | arabinose ABC transporter permease AraH |
RA | 1,976,582 | T→G | Y147S (TAC→TCC) | araH ← | arabinose ABC transporter permease AraH |
RA | 1,980,983 | T→G | intergenic (+74/+5) | ftnB → / ← yecJ | non‑heme ferritin‑like protein/DUF2766 domain‑containing protein |
RA | 1,982,130 | G→A | intergenic (+104/‑67) | yecR → / → ftnA | YecR‑like lipofamily protein/non‑heme ferritin |
RA | 1,994,358 | A→G | S50P (TCC→CCC) | fliZ ← | flagella biosynthesis regulatory protein FliZ |
RA | 2,000,655 | A→G | E340G (GAA→GGA) | amyA → | alpha‑amylase |
RA | 2,009,052 | A→G | D231G (GAC→GGC) | fliG → | flagellar motor switch protein FliG |
RA | 2,052,030 | T→C | D433G (GAT→GGT) | yeeO ← | toxic metabolite efflux MATE transporter YeeO |
RA | 2,065,124 | T→G | G35G (GGT→GGG) | agn43 → | autotransporter adhesin Ag43 |
RA | 2,069,352 | A→C | T365P (ACA→CCA) | BW25113_RS10450 → | hypothetical protein |
RA | 2,071,153 | G→C | G35A (GGC→GCC) | cbtA → | type IV toxin‑antitoxin system cytoskeleton‑binding toxin CbtA |
RA | 2,076,301 | A→C | H22P (CAC→CCC) | sbcB → | exodeoxyribonuclease I |
RA | 2,121,860 | A→G | N170N (AAT→AAC) | wcaF ← | colanic acid biosynthesis acetyltransferase WcaF |
RA | 2,141,824 | T→C | S224P (TCA→CCA) | yegD → | molecular chaperone |
RA | 2,154,426 | A→G | I854V (ATC→GTC) | mdtC → | multidrug efflux RND transporter permease subunit MdtC |
RA | 2,209,063 | +C | coding (719/732 nt) | mlrA → | HTH‑type transcriptional regulator MlrA |
RA | 2,211,818 | A→C | C73W (TGT→TGG) | yehY ← | glycine betaine ABC transporter permease YehY |
RA | 2,221,311 | A→G | pseudogene (927/1436 nt) | mdtQ ← | multidrug resistance outer membrane protein MdtQ |
RA | 2,237,080 | G→C | R18G (CGA→GGA) | folE ← | GTP cyclohydrolase I FolE |
RA | 2,243,084 | A→G | L5P (CTC→CCC) | yeiE ← | DNA‑binding transcriptional regulator YeiE |
RA | 2,247,045 | C→T | A194T (GCA→ACA) | nupX ← | NupC/NupG family nucleoside CNT transporter |
RA | 2,253,834 | A→G | I352I (ATT→ATC) | fruA ← | PTS fructose transporter subunit IIBC |
RA | 2,322,128 | (C)5→4 | coding (1149/1650 nt) | yfaQ ← | YfaQ family protein |
RA | 2,351,416 | A→G | pseudogene (134/198 nt) | BW25113_RS11725 → | hypothetical protein |
RA | 2,378,215 | A→G | D329D (GAT→GAC) | yfbK ← | VWA domain‑containing protein |
MC JC | 2,399,465 | Δ7 bp | coding (650‑656/939 nt) | lrhA ← | transcriptional regulator LrhA |
RA | 2,418,201 | A→G | L171P (CTG→CCG) | hisM ← | ABC transporter permease |
RA | 2,424,458 | A→G | intergenic (‑216/+43) | cvpA ← / ← dedD | colicin V production protein/cell division protein DedD |
RA | 2,434,438 | T→C | E216G (GAA→GGA) | fabB ← | beta‑ketoacyl‑ACP synthase I |
RA | 2,435,986 | A→C | L248F (TTA→TTC) | mnmC → | bifunctional tRNA (5‑methylaminomethyl‑2‑thiouridine)(34)‑methyltransferase MnmD/FAD‑dependent 5‑carboxymethylaminomethyl‑2‑thiouridine(34) oxidoreductase MnmC |
RA | 2,483,956 | A→G | S492P (TCA→CCA) | oxc ← | oxalyl‑CoA decarboxylase |
RA | 2,544,265 | A→T | I104N (ATC→AAC) | yfeY ← | RpoE‑regulated lipoprotein |
RA | 2,547,539 | A→G | S335P (TCC→CCC) | eutR ← | HTH‑type transcriptional regulator EutR |
RA | 2,557,839 | T→G | intergenic (+108/‑43) | BW25113_RS12770 → / → BW25113_RS12775 | hypothetical protein/hypothetical protein |
RA | 2,561,055 | A→G | S138P (TCC→CCC) | eutH ← | ethanolamine utilization protein EutH |
RA | 2,664,330 | A→T | T22S (ACC→TCC) | hcaC → | bifunctional 3‑phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit |
RA | 2,676,053 | T→G | T18P (ACC→CCC) | yphG ← | DUF5107 domain‑containing protein |
RA | 2,724,312 | T→G | noncoding (205/1542 nt) | BW25113_RS13535 ← | 16S ribosomal RNA |
RA | 2,755,250 | T→C | R550R (AGA→AGG) | abpB ← | DEAD/DEAH box helicase |
RA | 2,756,916 | T→C | K533E (AAG→GAG) | abpA ← | anti‑bacteriophage protein AbpA |
RA | 2,777,187 | T→C | pseudogene (1184/1374 nt) | BW25113_RS25705 ← | DUF5507 domain‑containing protein |
RA | 2,778,563 | (A)8→7 | intergenic (‑193/+558) | BW25113_RS25705 ← / ← BW25113_RS13825 | DUF5507 domain‑containing protein/tRNA‑Ile |
RA | 2,786,008 | T→G | G459G (GGT→GGG) | gabD → | NADP‑dependent succinate‑semialdehyde dehydrogenase |
RA | 2,831,745 | A→G | I293I (ATT→ATC) | ascG ← | DNA‑binding transcriptional regulator AscG |
RA | 2,884,026 | T→C | D411G (GAC→GGC) | cysJ ← | NADPH‑dependent assimilatory sulfite reductase flavoprotein subunit |
RA | 2,926,085 | A→C | G96G (GGT→GGG) | fucO ← | lactaldehyde reductase |
RA | 2,960,176 | G→A | R540W (CGG→TGG) | ptsP ← | phosphoenolpyruvate‑‑protein phosphotransferase |
RA | 2,974,914 | Δ1 bp | coding (628/1419 nt) | araE ← | arabinose‑proton symporter AraE |
RA | 2,984,282 | (C)6→7 | pseudogene (370/490 nt) | BW25113_RS14825 → | hypothetical protein |
RA | 3,000,345 | (A)5→4 | coding (722/1188 nt) | ygeW → | knotted carbamoyltransferase YgeW |
RA | 3,027,998 | T→C | E179G (GAA→GGA) | lysS ← | lysine‑‑tRNA ligase |
RA | 3,104,251 | T→G | T79P (ACC→CCC) | yghD ← | GspM family type II secretion system protein YghD |
RA | 3,111,922 | T→C | N184D (AAT→GAT) | sslE ← | lipoprotein metalloprotease SslE |
RA | 3,143,589 | A→C | Y190S (TAC→TCC) | yghA → | NADP(+)‑dependent aldehyde reductase |
RA | 3,246,701 | A→G | I291I (ATT→ATC) | yhaJ ← | DNA‑binding transcriptional regulator YhaJ |
RA | 3,263,514 | T→C | intergenic (+553/+61) | yhaC → / ← rnpB | YhaC family protein/RNase P RNA component class A |
RA | 3,303,978 | C→T | A184T (GCC→ACC) | pnp ← | polyribonucleotide nucleotidyltransferase |
RA | 3,332,009 | A→G | V200A (GTC→GCC) | mlaE ← | lipid asymmetry maintenance ABC transporter permease subunit MlaE |
RA | 3,351,627 | C→T | L1182L (CTG→TTG) | gltB → | glutamate synthase large subunit |
RA | 3,381,255 | A→C | V98G (GTG→GGG) | aaeB ← | p‑hydroxybenzoic acid efflux pump subunit AaeB |
RA | 3,473,413 | A→G | M185T (ATG→ACG) | kefB ← | glutathione‑regulated potassium‑efflux system protein KefB |
RA | 3,572,235 | A→G | intergenic (‑149/+75) | gntR ← / ← yhhW | gluconate operon transcriptional repressor GntR/quercetin 2,3‑dioxygenase |
RA | 3,633,239 | (T)8→7 | intergenic (‑159/‑232) | uspB ← / → uspA | universal stress protein UspB/universal stress protein UspA |
RA | 3,639,274 | T→C | V177A (GTC→GCC) | rlmJ → | 23S rRNA (adenine(2030)‑N(6))‑methyltransferase |
RA | 3,747,593 | C→G | A66P (GCC→CCC) | yiaW ← | DUF3302 domain‑containing protein |
RA | 3,829,452 | T→G | intergenic (‑163/‑130) | yicJ ← / → BW25113_RS18990 | glycoside‑pentoside‑hexuronide family transporter/tRNA‑Sec |
RA | 3,876,284 | T→C | D269G (GAT→GGT) | dnaA ← | chromosomal replication initiator protein DnaA |
RA | 3,937,289 | A→G | noncoding (226/2904 nt) | BW25113_RS19530 → | 23S ribosomal RNA |
RA | 3,969,741 | C→T | A35V (GCG→GTG) | wzxE → | lipid III flippase WzxE |
RA | 4,009,285 | T→C | E82G (GAG→GGG) | ysgA ← | dienelactone hydrolase family protein |
RA | 4,058,644 | Δ1 bp | coding (483/1404 nt) | yihO ← | MFS transporter |
RA | 4,062,410 | G→T | P76Q (CCG→CAG) | yihQ ← | sulfoquinovosidase |
RA | 4,077,206 | G→A | R659R (CGC→CGT) | fdnG ← | formate dehydrogenase‑N subunit alpha |
RA | 4,091,145 | C→T | G136G (GGC→GGT) | sodA → | superoxide dismutase [Mn] |
RA | 4,113,018 | G→A | R84C (CGC→TGC) | ftsN ← | cell division protein FtsN |
RA | 4,130,531 | A→G | I540T (ATC→ACC) | ptsP ← | phosphoenolpyruvate‑‑protein phosphotransferase |
RA | 4,171,129 | T→C | intergenic (+276/‑44) | rplL → / → rpoB | 50S ribosomal protein L7/L12/DNA‑directed RNA polymerase subunit beta |
RA | 4,192,005 | A→G | E51G (GAA→GGA) | zraS → | two‑component system sensor histidine kinase ZraS |
RA | 4,320,763 | T→C | S149P (TCG→CCG) | proP → | glycine betaine/L‑proline transporter ProP |
RA | 4,355,460 | A→C | G377G (GGT→GGG) | dcuA ← | anaerobic C4‑dicarboxylate transporter DcuA |
RA | 4,389,340 | A→G | E91G (GAA→GGA) | miaA → | tRNA (adenosine(37)‑N6)‑dimethylallyltransferase MiaA |
RA | 4,401,268 | T→G | G50G (GGT→GGG) | yjfK → | YjfK family protein |
RA | 4,423,077 | A→C | G255G (GGT→GGG) | qorB ← | NAD(P)H:quinone oxidoreductase |
RA | 4,464,092 | (C)6→5 | coding (152/594 nt) | bdcR → | TetR/AcrR family transcriptional regulator |
RA | 4,498,429 | T→G | R2S (AGA→AGC) | BW25113_RS22240 ← | IS30‑like element IS30 family transposase |
RA | 4,507,805 | T→C | E83G (GAA→GGA) | fecI ← | RNA polymerase sigma factor FecI |
RA | 4,524,810 | A→G | pseudogene (203/1241 nt) | yjhR → | helicase YjhR |
RA | 4,540,434 | A→C | V227G (GTT→GGT) | gntP ← | gluconate permease GntP |
RA | 4,565,565 | G→A | pseudogene (1830/2937 nt) | BW25113_RS22615 → | hypothetical protein |
RA | 4,589,054 | T→G | T69P (ACC→CCC) | opgB ← | phosphatidylglycerol‑‑membrane‑oligosaccharide glycerophosphotransferase |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NZ_CP009273 | 356975 | 357575 | 601 | 6 [4] | [3] 5 | [lacA] | [lacA] |
* | * | ÷ | NZ_CP009273 | 982947 | 983007 | 61 | 5 [2] | [4] 5 | ompF/asnS | porin OmpF/asparagine‑‑tRNA ligase |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 360104 = | 33 (0.860) | 43 (1.130) | 27/238 | 0.3 | 56.6% | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
* | ? | NZ_CP009273 | 1203246 = | 12 (0.310) | 16 (0.480) | 15/206 | 0.7 | 72.1% | coding (290/630 nt) | BW25113_RS05990 | hypothetical protein |
? | NZ_CP009273 | 1205075 = | 2 (0.060) | coding (40/540 nt) | BW25113_RS06005 | phage tail protein | |||||
* | ? | NZ_CP009273 | = 1203261 | 12 (0.310) | 8 (0.240) | 7/206 | 1.8 | 56.4% | coding (305/630 nt) | BW25113_RS05990 | hypothetical protein |
? | NZ_CP009273 | = 1205058 | 2 (0.060) | coding (57/540 nt) | BW25113_RS06005 | phage tail protein | |||||
* | ? | NZ_CP009273 | 4532499 = | 7 (0.180) | 8 (0.230) | 6/220 | 2.1 | 41.6% | intergenic (+49/‑433) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
? | NZ_CP009273 | 4532813 = | 16 (0.450) | intergenic (+363/‑119) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA | |||||
* | ? | NZ_CP009273 | = 4532507 | 7 (0.180) | 6 (0.170) | 6/220 | 2.1 | 34.8% | intergenic (+57/‑425) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
? | NZ_CP009273 | = 4532803 | 16 (0.450) | intergenic (+353/‑129) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |