breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	6,339	T→A	5.4%	Q15L (CAG→CTG)	trmE ←	GTPase
RA	6,346	T→G	5.5%	T13P (ACG→CCG)	trmE ←	GTPase
RA	6,429	Δ1 bp	6.4%	intergenic (‑47/+42)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	6,433:1	+T	7.0%	intergenic (‑51/+38)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	43,457	Δ1 bp	9.5%	intergenic (+23/+70)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	43,461:1	+A	9.3%	intergenic (+27/+66)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	45,680	C→G	5.0%	intergenic (‑156/+47)	cadA‑I ← / ← PP_0042	cadmium translocating P‑type ATPase/hypothetical protein
RA	58,747	T→A	6.1%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	6.1%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	88,649	T→A	5.4%	A223A (GCA→GCT)	betC ←	choline‑sulfatase
RA	88,653	T→A	5.1%	Q222L (CAG→CTG)	betC ←	choline‑sulfatase
RA	88,657	T→A	5.6%	S221C (AGC→TGC)	betC ←	choline‑sulfatase
RA	118,131	A→T	5.9%	intergenic (‑47/+18)	metQ ← / ← metI	methionine ABC transporter substrate‑binding protein/ABC transporter permease
RA	122,647	G→T	7.6%	A104A (GCC→GCA)	PP_0116 ←	putative lipoprotein
RA	122,650	A→C	7.7%	R103R (CGT→CGG)	PP_0116 ←	putative lipoprotein
RA	130,495	T→C	6.1%	noncoding (55/116 nt)	PP_mr02 →	Pseudomon‑1 ncRNA
RA	138,700	G→A	6.0%	R534Q (CGG→CAG)	PP_0131 →	membrane‑anchored phosphodiesterase
RA	146,127	T→A	8.1%	intergenic (+32/‑116)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	146,128	T→A	7.4%	intergenic (+33/‑115)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	155,543	G→T	5.0%	intergenic (‑248/+35)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	155,546	A→C	5.6%	intergenic (‑251/+32)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	162,281	A→T	9.0%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	8.8%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	181,943	C→T	14.9%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	Δ1 bp	5.1%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	5.2%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	26.4%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	5.0%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	44.9%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	5.6%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	20.1%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	24.8%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	26.5%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	27.9%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	8.2%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	15.0%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	8.9%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	16.2%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	16.4%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	23.4%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	26.0%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	15.0%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,707	C→A	5.2%	T1071T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	198,777	T→A	6.3%	L1428Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	211,621	G→C	6.6%	V5709V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	233,832	A→T	5.4%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	5.4%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	284,587	T→A	10.2%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	10.2%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	310,002	A→T	5.7%	intergenic (‑167/+30)	PP_0255 ← / ← PP_0256	hypothetical protein/putative oxidoreductase
RA	321,742	T→C	8.9%	intergenic (+27/+431)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	321,743	G→A	9.0%	intergenic (+28/+430)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,135	G→A	15.4%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	11.6%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	325,161	C→G	5.1%	P149A (CCA→GCA)	oprQ →	outer‑membrane porin D
RA	326,067	C→A	11.9%	*556Y (TAG→TAT)	PP_0269 ←	glutamate synthase large subunit
RA	326,070	T→G	11.6%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	337,812	A→G	14.5%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	18.6%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	17.5%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	17.0%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	17.3%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	16.9%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	17.7%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	351,752	C→T	6.1%	Q79* (CAG→TAG) ‡	hisA →	phosphoribosylformimino‑5‑aminoimidazole carboxamide ribonucleotide isomerase
RA	351,753	A→G	6.2%	Q79R (CAG→CGG) ‡	hisA →	phosphoribosylformimino‑5‑aminoimidazole carboxamide ribonucleotide isomerase
RA	367,023	G→T	6.8%	R99S (CGC→AGC)	PP_5442 ←	hypothetical protein
RA	368,754	G→A	5.6%	intergenic (‑101/‑170)	PP_0307 ← / → PP_0308	hypothetical protein/dipeptidase
RA	418,288	T→C	6.9%	V23A (GTG→GCG)	PP_0345 →	heptose kinase WapP
RA	418,298	C→G	10.0%	L26L (CTC→CTG)	PP_0345 →	heptose kinase WapP
RA	418,299	C→G	9.7%	Q27E (CAG→GAG)	PP_0345 →	heptose kinase WapP
RA	430,715	G→C	5.2%	L534L (CTC→CTG)	PP_0354 ←	CBS domain‑containing protein
RA	432,015	A→G	5.2%	F101S (TTC→TCC)	PP_0354 ←	CBS domain‑containing protein
RA	432,996	A→T	7.8%	intergenic (+18/+29)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,997	A→T	7.6%	intergenic (+19/+28)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,998	A→T	7.6%	intergenic (+20/+27)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	445,106	Δ1 bp	5.7%	intergenic (+76/‑212)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,110:1	+G	5.5%	intergenic (+80/‑208)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,118	G→A	6.4%	intergenic (+88/‑200)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	461,033	C→G	5.4%	V479L (GTG→CTG)	pqqF ←	coenzyme PQQ synthesis protein F
RA	461,040	T→G	5.4%	P476P (CCA→CCC)	pqqF ←	coenzyme PQQ synthesis protein F
RA	469,777	C→G	6.5%	G395R (GGT→CGT)	PP_0386 ←	sensory box protein
RA	471,069	T→C	8.9%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	8.9%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	476,700	A→C	9.2%	Q330P (CAG→CCG) ‡	tsaD →	tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA	476,701	G→T	9.6%	Q330H (CAG→CAT) ‡	tsaD →	tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA	484,203	C→G	5.4%	G80A (GGC→GCC)	yeaG ←	protein kinase
RA	503,828	Δ1 bp	9.9%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,834	A→T	8.9%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,835	A→T	8.7%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,840:1	+C	8.8%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	524,339	A→G	5.5%	intergenic (+203/‑613)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	11.9%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	11.8%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,368	C→T	9.3%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	543,070	C→A	39.9%	A436E (GCG→GAG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	547,215	C→T	5.8%	A21V (GCG→GTG)	fusA →	elongation factor G 1
RA	550,552	C→G	7.3%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	556,989	A→C	6.7%	K12T (AAG→ACG)	rpsN →	30S ribosomal protein S14
RA	556,992	G→T	6.6%	R13L (CGT→CTT)	rpsN →	30S ribosomal protein S14
RA	557,000	A→G	5.6%	T16A (ACG→GCG)	rpsN →	30S ribosomal protein S14
RA	557,335	Δ1 bp	7.8%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	8.3%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	563,051	G→A	11.0%	R44H (CGC→CAC)	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	564,380:1	+A	6.7%	intergenic (+29/‑144)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,385	Δ1 bp	7.1%	intergenic (+34/‑139)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	570,272	G→T	5.3%	P215P (CCG→CCT)	yajR →	transporter
RA	571,620	G→A	6.6%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,621	T→C	7.4%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	572,521	A→G	6.3%	I191T (ATC→ACC)	PP_0486 ←	GntR family transcriptional regulator
RA	572,528	C→T	6.0%	V189M (GTG→ATG)	PP_0486 ←	GntR family transcriptional regulator
RA	591,082	G→A	5.4%	R109H (CGC→CAC)	PP_0501 →	NAD‑dependent epimerase/dehydratase family protein
RA	591,085	T→C	5.4%	V110A (GTG→GCG)	PP_0501 →	NAD‑dependent epimerase/dehydratase family protein
RA	612,755	G→C	5.3%	P477R (CCG→CGG)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	612,761	T→C	5.4%	N475S (AAC→AGC)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	638,745	A→T	6.6%	L16Q (CTG→CAG)	PP_0550 ←	hypothetical protein
RA	648,250	A→T	5.5%	intergenic (+16/+75)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,290	A→C	8.2%	intergenic (+56/+35)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,292	A→T	8.2%	intergenic (+58/+33)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,294	G→T	8.0%	intergenic (+60/+31)	acoR → / ← accC	acetoin catabolism regulatory protein/acetyl‑CoA carboxylase biotin carboxylase subunit
RA	697,217	T→C	7.4%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	9.7%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	9.8%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	44.8%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	726,945	A→C	8.4%	intergenic (‑189/+78)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	726,953	G→T	6.3%	intergenic (‑197/+70)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	726,954	T→C	6.6%	intergenic (‑198/+69)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	726,960	C→A	5.5%	intergenic (‑204/+63)	PP_0620 ← / ← PP_0621	GntR family transcriptional regulator/hypothetical protein
RA	727,318	C→T	8.2%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	8.0%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,320	A→G	8.0%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	730,238	A→G	5.5%	intergenic (+24/‑226)	yfiH → / → clpB	protein YfiH/chaperone protein ClpB
RA	730,239	C→T	5.6%	intergenic (+25/‑225)	yfiH → / → clpB	protein YfiH/chaperone protein ClpB
RA	733,648	A→T	7.0%	intergenic (+19/‑28)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,649	A→T	8.1%	intergenic (+20/‑27)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,650	A→T	7.3%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	780,559	A→C	10.7%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	10.9%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	11.8%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	788,584	C→A	7.7%	intergenic (+31/‑182)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,586	A→T	7.5%	intergenic (+33/‑180)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,587	A→T	7.4%	intergenic (+34/‑179)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,589	T→G	7.5%	intergenic (+36/‑177)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,599	T→C	6.9%	intergenic (+46/‑167)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	798,632	T→A	6.2%	L201Q (CTG→CAG)	fklB‑I →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	798,665	C→A	6.7%	intergenic (+17/+10)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,666	C→G	6.8%	intergenic (+18/+9)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	798,667	T→G	6.7%	intergenic (+19/+8)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	835,745	T→G	5.5%	M113L (ATG→CTG)	PP_0718 ←	sulfate transporter
RA	835,750	C→A	5.2%	S111I (AGC→ATC)	PP_0718 ←	sulfate transporter
RA	836,219	G→T	5.1%	intergenic (‑138/+39)	PP_0718 ← / ← ychF	sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase
RA	850,445	C→G	9.4%	intergenic (‑25/‑780)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,449	Δ1 bp	9.1%	intergenic (‑29/‑776)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,452:1	+G	8.9%	intergenic (‑32/‑773)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,455	C→G	9.5%	intergenic (‑35/‑770)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	868,054	G→T	6.2%	intergenic (+149/+28)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,055	A→C	7.0%	intergenic (+150/+27)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	870,233	G→T	7.5%	R65S (CGC→AGC)	PP_5456 ←	hypothetical protein
RA	870,234	A→C	7.5%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	883,809	T→G	7.4%	intergenic (+44/‑284)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	900,537	C→A	5.9%	intergenic (+26/+19)	PP_0784 → / ← cysZ	hypothetical protein/sulfate transport protein CysZ
RA	900,539	T→G	6.7%	intergenic (+28/+17)	PP_0784 → / ← cysZ	hypothetical protein/sulfate transport protein CysZ
RA	919,675	G→C	8.6%	intergenic (‑143/+48)	PP_5458 ← / ← PP_0800	hypothetical protein/hypothetical protein
RA	955,079	Δ1 bp	6.9%	intergenic (+30/‑283)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,083	T→A	7.0%	intergenic (+34/‑279)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,085:1	+G	6.9%	intergenic (+36/‑277)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,151	Δ1 bp	8.7%	intergenic (+102/‑211)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,152	A→G	12.1%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,154	G→A	12.7%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	T→A	20.9%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,156	T→C	16.0%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158	C→T	12.4%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158:1	+T	8.5%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	968,878	G→T	8.3%	intergenic (‑308/+23)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	968,881	A→C	7.9%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	970,240	T→G	8.6%	F29C (TTC→TGC) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	970,241	C→A	8.4%	F29L (TTC→TTA) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	972,118	T→A	7.3%	L136Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	972,121	T→A	7.3%	L137Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	994,950	T→A	7.9%	intergenic (+26/+99)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	994,951	T→A	8.0%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	997,736	A→G	5.3%	intergenic (‑138/+94)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	999,628	C→G	5.9%	G165A (GGC→GCC)	PP_0861 ←	outer membrane ferric siderophore receptor
RA	1,010,419	A→C	5.3%	L216R (CTG→CGG)	PP_0871 ←	glycine betaine/carnitine/choline ABC transporter permease
RA	1,045,251	G→A	6.0%	intergenic (+21/+85)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,255	G→A	6.2%	intergenic (+25/+81)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,049,182	T→G	6.7%	K141Q (AAG→CAG)	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,049,187	A→T	5.9%	L139Q (CTG→CAG)	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,049,192	C→A	6.1%	L137L (CTG→CTT)	PP_0907 ←	RND transporter membrane fusion protein‑like protein
RA	1,058,260	Δ1 bp	9.0%	intergenic (‑186/+34)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,058,264:1	+T	8.8%	intergenic (‑190/+30)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,060,099	Δ1 bp	5.4%	coding (242/891 nt)	iciA →	chromosome initiation inhibitor
RA	1,068,111	T→G	5.3%	W92G (TGG→GGG)	PP_0926 →	membrane protein
RA	1,068,121	C→A	6.4%	P95Q (CCG→CAG)	PP_0926 →	membrane protein
RA	1,070,265	G→C	35.3%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	33.7%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,121,449	C→T	8.0%	V295V (GTC→GTT)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,450	A→G	8.0%	N296D (AAC→GAC)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,458	C→A	7.0%	R298R (CGC→CGA)	PP_0982 →	YjgP/YjgQ family permease
RA	1,145,439	C→T	12.0%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	12.6%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	12.9%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	15.8%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,178,755:1	+A	5.7%	intergenic (+54/+40)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,758	G→C	5.5%	intergenic (+57/+37)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,760	Δ1 bp	5.6%	intergenic (+59/+35)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,184,567	A→T	8.2%	intergenic (‑177/‑235)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,574	A→G	8.3%	intergenic (‑184/‑228)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,591	G→C	11.1%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	11.1%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,618	A→T	6.6%	intergenic (‑228/‑184)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,189,041	A→G	7.3%	intergenic (+25/+17)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,189,042	C→T	7.3%	intergenic (+26/+16)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,199,349	C→G	5.6%	T66T (ACC→ACG)	gspF →	protein secretion protein
RA	1,199,350	C→G	5.7%	R67G (CGT→GGT)	gspF →	protein secretion protein
RA	1,229,085	G→C	6.1%	E753D (GAG→GAC)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,237,663	A→G	7.3%	L151P (CTG→CCG)	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,241,968:1	+T	9.8%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,973	Δ1 bp	9.9%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,256,887	A→T	6.9%	noncoding (434/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,888	G→T	6.7%	noncoding (433/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,889	A→C	6.9%	noncoding (432/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,256,890	A→T	6.9%	noncoding (431/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,286,864	A→T	8.9%	K81* (AAG→TAG) ‡	PP_1125 →	putative Helicase
RA	1,286,865	A→T	8.9%	K81M (AAG→ATG) ‡	PP_1125 →	putative Helicase
RA	1,294,120	C→T	6.7%	intergenic (+15/+25)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,121	A→T	7.5%	intergenic (+16/+24)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,122	A→G	7.4%	intergenic (+17/+23)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,307,446	C→G	9.1%	G60R (GGC→CGC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,307,447	C→G	9.1%	A59A (GCG→GCC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,327,127	C→T	53.0%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,356,411	G→C	7.1%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,364,664	A→T	7.0%	intergenic (+28/+121)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,665	A→T	7.8%	intergenic (+29/+120)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,666	A→T	7.1%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,376,327	A→T	6.0%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	6.0%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	6.0%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,382,332	A→T	6.2%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
RA	1,383,260	A→T	6.0%	L16Q (CTG→CAG)	PP_1204 ←	lipoprotein
RA	1,392,036	T→C	6.1%	intergenic (+61/‑54)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,045	G→A	10.0%	intergenic (+70/‑45)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,047	C→G	10.1%	intergenic (+72/‑43)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,049	T→C	9.8%	intergenic (+74/‑41)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,400,878	C→A	8.6%	intergenic (+35/‑134)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,880	A→T	7.7%	intergenic (+37/‑132)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,882	T→G	7.7%	intergenic (+39/‑130)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,403,596	G→A	14.1%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	13.6%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,413,400	T→A	6.9%	intergenic (+7/+29)	PP_1234 → / ← PP_1235	permease/AhpC/TSA family protein
RA	1,413,410	A→C	7.2%	intergenic (+17/+19)	PP_1234 → / ← PP_1235	permease/AhpC/TSA family protein
RA	1,413,411	A→T	7.6%	intergenic (+18/+18)	PP_1234 → / ← PP_1235	permease/AhpC/TSA family protein
RA	1,413,412	G→T	8.3%	intergenic (+19/+17)	PP_1234 → / ← PP_1235	permease/AhpC/TSA family protein
RA	1,414,216:1	+A	5.6%	coding (259/561 nt)	PP_1236 ←	glycine cleavage system transcriptional repressor
RA	1,414,219	Δ1 bp	5.6%	coding (256/561 nt)	PP_1236 ←	glycine cleavage system transcriptional repressor
RA	1,430,112	C→T	6.4%	T48M (ACG→ATG)	PP_1252 →	group II intron‑encoding maturase
RA	1,443,881	C→A	5.3%	Q104H (CAG→CAT)	PP_1262 ←	LysR family transcriptional regulator
RA	1,458,124	T→G	7.3%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,126	A→T	5.7%	intergenic (+19/+21)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,463,031	A→T	9.4%	intergenic (‑100/+42)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,463,032	A→T	9.4%	intergenic (‑101/+41)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,464,203	G→A	6.7%	T474T (ACC→ACT) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,205	T→A	6.4%	T474S (ACC→TCC) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,207	T→C	6.5%	Q473R (CAG→CGG)	algX ←	alginate biosynthesis protein AlgX
RA	1,469,815	A→G	5.7%	V112A (GTG→GCG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,818	A→T	5.9%	L111Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,821	A→T	5.7%	L110Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,469,824	C→T	6.3%	R109H (CGC→CAC)	algK ←	alginate biosynthesis protein AlgK
RA	1,474,229	G→A	5.2%	intergenic (‑2/+799)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,504,076	T→A	15.8%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,077	T→A	15.8%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,932	A→G	23.4%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,936	G→A	21.6%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	23.4%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	22.2%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	6.8%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,088	G→T	6.2%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	5.8%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	6.5%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,509,433	T→G	6.3%	H110P (CAT→CCT)	PP_1324 ←	endonuclease
RA	1,509,437	G→A	6.2%	H109Y (CAC→TAC)	PP_1324 ←	endonuclease
RA	1,509,440	T→C	5.7%	S108G (AGC→GGC)	PP_1324 ←	endonuclease
RA	1,509,444	C→A	5.9%	Q106H (CAG→CAT)	PP_1324 ←	endonuclease
RA	1,526,622	T→A	5.1%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,544,531	C→A	17.8%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	17.1%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	16.5%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	16.3%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	16.5%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	17.6%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,551,324	G→T	5.7%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	5.5%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,364	G→A	5.3%	intergenic (+81/+45)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,555,429:1	+C	7.1%	intergenic (+25/+49)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,432	Δ1 bp	7.2%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,563,870	A→C	5.1%	intergenic (+94/+28)	PP_1372 → / ← pitB	hypothetical protein/phosphate transporter
RA	1,564,973	A→T	8.5%	L133Q (CTG→CAG)	pitB ←	phosphate transporter
RA	1,564,981	A→G	7.4%	G130G (GGT→GGC)	pitB ←	phosphate transporter
RA	1,592,024	C→A	13.9%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	14.5%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,596,415	A→T	5.4%	L213Q (CTG→CAG)	dctD‑III ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,625,249	G→T	5.2%	intergenic (+30/+27)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,625,250	A→C	6.0%	intergenic (+31/+26)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,628,404	G→A	5.9%	A159T (GCC→ACC)	mucA →	sigma factor AlgU negative regulator
RA	1,629,495	G→T	9.1%	Q321H (CAG→CAT)	mucB →	sigma factor AlgU regulator MucB
RA	1,629,498	A→C	8.7%	*322Y (TAA→TAC)	mucB →	sigma factor AlgU regulator MucB
RA	1,637,367	A→T	12.7%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	12.7%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,638	C→T	6.0%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	8.1%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	7.5%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,321:1	+C	5.1%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,648,917	Δ1 bp	100%	intergenic (‑154/+142)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,652,585	A→G	5.3%	I1409T (ATC→ACC)	PP_1449 ←	hypothetical protein
RA	1,661,525	T→G	5.2%	V52G (GTC→GGC)	PP_1456 →	membrane protein
RA	1,667,955	G→T	5.6%	E305D (GAG→GAT)	ffh →	signal recognition particle GTPase subunit
RA	1,667,961	C→T	5.5%	A307A (GCC→GCT)	ffh →	signal recognition particle GTPase subunit
RA	1,681,709	A→T	6.0%	E62D (GAA→GAT)	recJ →	ssDNA‑specific exonuclease RecJ
RA	1,681,711	C→G	6.1%	A63G (GCC→GGC)	recJ →	ssDNA‑specific exonuclease RecJ
RA	1,681,713	A→T	7.0%	I64F (ATC→TTC)	recJ →	ssDNA‑specific exonuclease RecJ
RA	1,683,290	C→G	10.8%	intergenic (+57/‑174)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,683,293	C→G	8.4%	intergenic (+60/‑171)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,691,814	T→C	16.1%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,815	C→G	16.2%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	20.4%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	19.9%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,838	C→G	8.3%	intergenic (+63/‑108)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,839	G→A	8.3%	intergenic (+64/‑107)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,693,834	C→G	7.6%	R87R (CGC→CGG)	PP_1489 →	CheW domain‑containing protein
RA	1,698,852	Δ1 bp	7.1%	coding (558/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,698,856:1	+C	7.2%	coding (562/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,703,263	T→C	7.3%	intergenic (+70/‑97)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	16.0%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,707,269	G→C	10.2%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,272	G→C	10.3%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,288	A→G	8.4%	intergenic (+64/+78)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,712,993	T→A	5.4%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	5.5%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,723,025	T→C	5.6%	I539T (ATC→ACC)	PP_1517 →	RND family transporter
RA	1,748,740	T→G	5.1%	intergenic (‑31/‑301)	PP_1548 ← / → PP_5744	hypothetical protein/hypothetical protein
RA	1,786,064	T→A	5.6%	intergenic (+38/‑148)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,065	T→A	5.6%	intergenic (+39/‑147)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,066	T→A	5.6%	intergenic (+40/‑146)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,788,662	G→T	7.6%	L31L (CTG→CTT)	uppS →	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
RA	1,788,663	C→G	7.6%	L32V (CTG→GTG)	uppS →	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
RA	1,799,892	G→A	5.4%	intergenic (+20/‑167)	rnhB → / → dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
RA	1,810,377	T→G	7.1%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	6.7%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,819,831	Δ1 bp	5.3%	intergenic (+26/‑449)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,833	T→A	5.2%	intergenic (+28/‑447)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,861	G→T	5.0%	intergenic (+56/‑419)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,822,230	G→T	6.7%	intergenic (+30/+28)	PP_mr22 → / ← fdxA	PrrB_RsmZ ncRNA/ferredoxin 1
RA	1,822,231	A→T	6.4%	intergenic (+31/+27)	PP_mr22 → / ← fdxA	PrrB_RsmZ ncRNA/ferredoxin 1
RA	1,822,232	A→C	6.6%	intergenic (+32/+26)	PP_mr22 → / ← fdxA	PrrB_RsmZ ncRNA/ferredoxin 1
RA	1,831,819	G→A	5.6%	R219Q (CGG→CAG)	yfiP →	hypothetical protein
RA	1,831,822	T→C	7.5%	L220P (CTG→CCG)	yfiP →	hypothetical protein
RA	1,841,822	G→A	5.9%	Q75* (CAG→TAG)	ldhA ←	D‑lactate dehydrogenase
RA	1,846,339	Δ1 bp	9.5%	coding (588/1377 nt)	pfeS‑II →	histidine kinase
RA	1,846,345:1	+A	9.5%	coding (594/1377 nt)	pfeS‑II →	histidine kinase
JC	1,852,158	Δ33 bp	100%	coding (1202‑1234/2241 nt)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,859,150	C→G	6.8%	intergenic (+28/+73)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,156	A→T	7.8%	intergenic (+34/+67)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,162	C→G	7.3%	intergenic (+40/+61)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,897,245	G→T	11.5%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,249	T→A	11.6%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,253	A→C	9.3%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,899,025	T→C	6.0%	intergenic (+53/‑467)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,921,591	T→A	16.8%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	16.7%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,933,707	G→T	7.4%	R30R (CGC→CGA)	minD ←	MinC‑MinD‑MinE system ATPase
RA	1,933,712	G→C	8.2%	L29V (CTG→GTG)	minD ←	MinC‑MinD‑MinE system ATPase
RA	1,933,717	A→C	7.3%	L27R (CTC→CGC)	minD ←	MinC‑MinD‑MinE system ATPase
RA	1,940,454	G→C	5.8%	A289G (GCC→GGC)	PP_1740 ←	beta (1‑6) glucans synthase
RA	1,947,418	A→G	5.6%	V122A (GTG→GCG)	PP_1748 ←	hypothetical protein
RA	1,955,252	T→A	10.0%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	10.1%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,263	A→G	8.1%	intergenic (+50/‑143)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,271	C→A	5.3%	intergenic (+58/‑135)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,967,187	C→T	5.5%	intergenic (+14/+105)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,974,807	G→T	5.5%	Q258H (CAG→CAT)	serC →	3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	1,981,135	T→G	7.1%	intergenic (+31/‑269)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,981,136	C→A	7.2%	intergenic (+32/‑268)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,993,644:1	+T	8.1%	intergenic (+39/+59)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,993,647	Δ1 bp	7.8%	intergenic (+42/+56)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,996,057	C→G	5.3%	intergenic (‑260/+25)	PP_mr26 ← / ← rfbC	C4 ncRNA/dTDP‑4‑dehydrorhamnose 3,5‑epimerase
RA	2,019,126	C→A	6.1%	L120M (CTG→ATG)	PP_1797 →	HlyD family secretion protein
RA	2,062,881	G→C	5.5%	A585P (GCT→CCT)	PP_1838 →	membrane protein
RA	2,068,194	A→T	6.1%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,195	A→T	6.1%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,078,282	T→C	5.2%	intergenic (+24/+91)	PP_1853 → / ← PP_1854	LysR family transcriptional regulator/hypothetical protein
RA	2,087,366	Δ1 bp	5.3%	intergenic (+136/+782)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,376	C→G	7.4%	intergenic (+146/+772)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,377	C→G	7.4%	intergenic (+147/+771)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,404	C→G	7.1%	intergenic (+174/+744)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,405	C→G	7.1%	intergenic (+175/+743)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,095,232	G→C	14.3%	intergenic (‑240/+77)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,095,235	G→C	13.7%	intergenic (‑243/+74)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,097,506	G→C	6.0%	S137T (AGT→ACT)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,097,512	A→G	5.4%	Q139R (CAG→CGG)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,107,226	G→T	5.3%	intergenic (‑67/+122)	PP_1880 ← / ← PP_1881	outer membrane autotransporter/hypothetical protein
RA	2,109,062	A→T	5.2%	I104N (ATT→AAT)	PP_1881 ←	hypothetical protein
RA	2,134,321	G→T	6.0%	intergenic (‑44/+25)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,138,457	C→A	6.0%	R173S (CGC→AGC)	yadG →	ABC transporter ATP‑binding protein
RA	2,139,665	T→G	5.1%	Q167H (CAA→CAC)	PP_5481 ←	hypothetical protein
RA	2,139,671	A→T	6.2%	R165R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,139,674	A→T	5.5%	R164R (CGT→CGA)	PP_5481 ←	hypothetical protein
RA	2,139,680	C→A	5.8%	Q162H (CAG→CAT)	PP_5481 ←	hypothetical protein
RA	2,143,680:1	+T	5.4%	coding (417/435 nt)	PP_1899 →	ExbD/TolR family protein
RA	2,143,685	A→T	5.3%	Q141L (CAG→CTG)	PP_1899 →	ExbD/TolR family protein
RA	2,150,651	G→C	5.1%	noncoding (291/373 nt)	PP_mr28 ←	rne‑II regulatory region
RA	2,154,429	T→G	6.7%	Q129P (CAG→CCG)	PP_1909 ←	septum formation protein
RA	2,154,434	T→A	6.7%	Q127H (CAA→CAT)	PP_1909 ←	septum formation protein
RA	2,154,439	C→A	7.3%	G126W (GGG→TGG)	PP_1909 ←	septum formation protein
RA	2,273,095	A→G	5.0%	intergenic (+17/+274)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,105	C→G	9.6%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,109	A→T	8.4%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,113	C→G	8.5%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,282,780	T→G	9.5%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,813	T→G	37.2%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	31.0%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	31.1%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	33.0%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,855	C→A	8.0%	intergenic (‑204/+25)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,298,647	G→A	9.1%	D506D (GAC→GAT)	sbcC ←	exonuclease subunit SbcC
RA	2,298,652	T→C	7.4%	I505V (ATC→GTC)	sbcC ←	exonuclease subunit SbcC
RA	2,312,886	T→G	5.4%	R5R (AGG→CGG)	PP_2034 ←	membrane protein
RA	2,326,711	T→A	6.4%	G212G (GGA→GGT)	PP_2045 ←	metallo‑beta‑lactamase family protein
RA	2,351,632	A→C	6.4%	L36R (CTG→CGG) ‡	PP_2066 ←	GntR family transcriptional regulator
RA	2,351,633	G→T	6.3%	L36M (CTG→ATG) ‡	PP_2066 ←	GntR family transcriptional regulator
RA	2,351,640	C→G	6.3%	V33V (GTG→GTC)	PP_2066 ←	GntR family transcriptional regulator
RA	2,381,445	T→G	8.6%	intergenic (+31/+56)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,381,446	C→A	7.4%	intergenic (+32/+55)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,392,660	C→G	7.0%	I382M (ATC→ATG)	PP_2097 →	sensory box protein
RA	2,395,626	G→C	5.6%	intergenic (‑191/+52)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,628	A→T	5.9%	intergenic (‑193/+50)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,630	G→C	6.0%	intergenic (‑195/+48)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,412,947	G→C	8.7%	intergenic (+168/‑253)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,948	G→C	10.3%	intergenic (+169/‑252)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,958	Δ1 bp	5.6%	intergenic (+179/‑242)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,416,597	A→T	7.3%	intergenic (+87/+28)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,416,598	A→T	6.7%	intergenic (+88/+27)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,420,641	Δ1 bp	7.6%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	7.2%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,431,892	T→A	5.1%	A36A (GCA→GCT)	PP_2130 ←	lytic transglycosylase
RA	2,456,825	T→C	6.4%	intergenic (+33/‑148)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,826	T→G	6.7%	intergenic (+34/‑147)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,827	C→A	6.8%	intergenic (+35/‑146)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,456,828	G→A	7.1%	intergenic (+36/‑145)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,457,034	T→A	5.4%	L21Q (CTG→CAG)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,457,037	A→C	5.1%	E22A (GAG→GCG)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,457,043	T→A	5.1%	L24Q (CTG→CAG)	PP_2150 →	thiamine biosynthesis lipoprotein
RA	2,460,774	G→C	6.9%	L25V (CTG→GTG)	PP_2153 ←	hypothetical protein
RA	2,460,775	G→C	7.1%	H24Q (CAC→CAG)	PP_2153 ←	hypothetical protein
RA	2,462,973	T→A	8.7%	L229Q (CTG→CAG)	lolD →	lipoprotein‑releasing system ATP‑binding protein LolD
RA	2,468,743	C→T	7.7%	G75S (GGC→AGC)	PP_2162 ←	phosphonoacetaldehyde phosphonohydrolase‑like protein
RA	2,474,192	C→T	5.8%	intergenic (‑54/+126)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,197	A→G	5.6%	intergenic (‑59/+121)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,198	G→A	5.5%	intergenic (‑60/+120)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,203	G→A	5.4%	intergenic (‑65/+115)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,474,205	A→G	5.3%	intergenic (‑67/+113)	PP_2167 ← / ← tal	PhoD‑like phosphatase/transaldolase
RA	2,493,952	C→A	5.1%	T243T (ACG→ACT)	PP_2187 ←	universal stress protein family protein
RA	2,500,681	Δ1 bp	7.2%	coding (831/891 nt)	PP_2194 ←	LysR family transcriptional regulator
RA	2,500,688	T→C	7.2%	H275R (CAC→CGC) ‡	PP_2194 ←	LysR family transcriptional regulator
RA	2,500,689	G→A	7.7%	H275Y (CAC→TAC) ‡	PP_2194 ←	LysR family transcriptional regulator
RA	2,500,695:1	+A	5.7%	coding (817/891 nt)	PP_2194 ←	LysR family transcriptional regulator
RA	2,523,298	A→C	5.3%	intergenic (+60/‑24)	PP_2212 → / → PP_2213	leucine‑rich repeat‑containing protein/acyl‑CoA synthetase
RA	2,540,852	T→A	6.4%	intergenic (+22/+27)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,853	G→C	6.4%	intergenic (+23/+26)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,854	T→A	5.9%	intergenic (+24/+25)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,560,505	T→A	9.6%	W142R (TGG→AGG) ‡	PP_2243 →	hypothetical protein
RA	2,560,507	G→C	9.3%	W142C (TGG→TGC) ‡	PP_2243 →	hypothetical protein
RA	2,560,509	T→A	9.6%	L143Q (CTG→CAG)	PP_2243 →	hypothetical protein
RA	2,628,429	A→C	7.8%	A16A (GCA→GCC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,628,430	G→T	8.0%	G17C (GGC→TGC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,633,500	T→G	5.9%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,633,501	C→A	6.5%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,641,850	T→G	5.8%	S24A (TCG→GCG)	PP_2312 →	lytic transglycosylase family protein
RA	2,651,319	G→C	8.8%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,669,714	T→G	8.0%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,717	C→A	7.4%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,710,418	G→C	6.2%	K318N (AAG→AAC)	PP_2372 →	sugar‑binding protein
RA	2,710,422	A→T	6.2%	R320W (AGG→TGG)	PP_2372 →	sugar‑binding protein
RA	2,710,426	G→C	6.1%	R321P (CGT→CCT)	PP_2372 →	sugar‑binding protein
RA	2,741,794	T→G	5.9%	L1377W (TTG→TGG)	PP_2395 →	leucine‑rich repeat‑containing protein
RA	2,742,960	C→T	6.1%	H5Y (CAC→TAC) ‡	PP_2397 →	EF hand domain‑containing protein
RA	2,742,961	A→G	6.2%	H5R (CAC→CGC) ‡	PP_2397 →	EF hand domain‑containing protein
RA	2,754,917	G→A	5.4%	A400A (GCG→GCA)	czcA‑II →	cation efflux system protein
RA	2,755,062	C→T	6.7%	R449C (CGC→TGC)	czcA‑II →	cation efflux system protein
RA	2,756,879	A→C	8.1%	intergenic (+15/+18)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,756,880	A→T	8.1%	intergenic (+16/+17)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,756,881	G→T	8.2%	intergenic (+17/+16)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,766,399	G→A	6.5%	A20A (GCC→GCT)	PP_2419 ←	membrane protein
RA	2,766,410	T→C	6.6%	S17G (AGC→GGC)	PP_2419 ←	membrane protein
RA	2,787,666	G→A	6.8%	intergenic (+70/‑55)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,787,672	C→G	5.7%	intergenic (+76/‑49)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,787,673	C→G	5.9%	intergenic (+77/‑48)	ahpC → / → ahpF	peroxiredoxin/alkylhydroperoxide reductase small subunit/alkyl hydroperoxide reductase subunit F
RA	2,788,444:1	+A	7.8%	coding (724/1563 nt)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,796,569	A→T	5.1%	noncoding (36/77 nt)	PP_t42 →	tRNA‑Val
RA	2,799,214	A→G	8.1%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,220	C→T	8.9%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,223	A→G	8.0%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,229	C→T	7.1%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,816,637	T→A	10.1%	I21N (ATT→AAT)	PP_2472 →	MerR family transcriptional regulator
RA	2,841,979	T→A	5.8%	intergenic (‑115/+137)	yqhD ← / ← PP_2493	NAD(P)‑dependent alcohol dehydrogenase/RadC family protein
RA	2,852,440	T→A	7.0%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,873,690	G→A	6.1%	V143M (GTG→ATG) ‡	cigR →	membrane protein
RA	2,873,691	T→C	6.1%	V143A (GTG→GCG) ‡	cigR →	membrane protein
RA	2,880,359	T→C	10.2%	V53A (GTG→GCG)	PP_2535 →	transport protein
RA	2,880,362	T→C	9.8%	L54P (CTG→CCG)	PP_2535 →	transport protein
RA	2,880,367	G→A	7.1%	G56S (GGC→AGC)	PP_2535 →	transport protein
RA	2,880,370	G→A	6.9%	A57T (GCG→ACG)	PP_2535 →	transport protein
RA	2,917,647	G→T	5.4%	W2208C (TGG→TGT)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,951,377	G→C	7.8%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	7.5%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	7.5%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,958,833	T→C	5.2%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,842	G→C	5.2%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,843	T→C	5.1%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,846	G→C	5.1%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,850	G→C	5.3%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,982,740	C→G	6.2%	R161P (CGC→CCC)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,982,931	C→A	7.2%	E97D (GAG→GAT) ‡	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,982,932	T→G	7.7%	E97A (GAG→GCG) ‡	PP_2608 ←	shikimate dehydrogenase family protein
RA	3,001,858	C→G	7.8%	A180G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,001,864	G→A	8.8%	R182Q (CGG→CAG)	PP_2625 →	hypothetical protein
RA	3,001,867	G→C	7.9%	G183A (GGC→GCC)	PP_2625 →	hypothetical protein
RA	3,001,870	T→C	7.6%	L184P (CTG→CCG)	PP_2625 →	hypothetical protein
RA	3,001,876	C→G	8.8%	A186G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,006,511	T→G	7.1%	F1017V (TTC→GTC)	PP_2627 →	membrane protein
RA	3,006,516	G→T	7.0%	L1018L (CTG→CTT)	PP_2627 →	membrane protein
RA	3,006,517	A→C	6.9%	K1019Q (AAG→CAG)	PP_2627 →	membrane protein
RA	3,006,522	C→A	7.1%	D1020E (GAC→GAA)	PP_2627 →	membrane protein
RA	3,008,356	A→G	12.6%	M261T (ATG→ACG)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,008,361	C→T	12.2%	S259S (TCG→TCA)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,019,860	G→A	6.6%	A119T (GCG→ACG)	PP_2638 →	cellulose synthase operon protein C
RA	3,019,865	T→C	6.3%	R120R (CGT→CGC)	PP_2638 →	cellulose synthase operon protein C
RA	3,030,456	C→G	9.7%	intergenic (+413/‑281)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,460	G→C	9.5%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,463	G→C	9.1%	intergenic (+420/‑274)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,033,588	A→T	6.7%	D29V (GAC→GTC)	PP_2646 →	hypothetical protein
RA	3,047,779	G→T	5.3%	L163L (CTG→CTT)	PP_2660 →	hypothetical protein
RA	3,048,586	T→G	5.0%	*200G (TGA→GGA)	PP_2661 →	hypothetical protein
RA	3,048,633	A→G	7.9%	intergenic (+45/‑251)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,647	G→T	18.5%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,648	A→C	18.9%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,079,678	C→T	6.2%	intergenic (‑370/+64)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,079,684	G→C	6.3%	intergenic (‑376/+58)	PP_2688 ← / ← PP_2689	hypothetical protein/endoribonuclease
RA	3,146,654	T→C	8.6%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,657	G→A	8.8%	intergenic (+50/+16)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,159,523	T→C	6.8%	F500S (TTC→TCC)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,166,099	G→C	5.9%	G163A (GGC→GCC)	PP_2780 →	3‑oxoacyl‑ACP synthase
RA	3,189,321	G→C	9.5%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,189,322	G→C	9.1%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,198,945	A→T	5.1%	intergenic (‑246/+31)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,198,949	A→T	5.7%	intergenic (‑250/+27)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,213,020	T→A	6.7%	M15K (ATG→AAG)	mexC →	multidrug RND transporter membrane fusion protein MexC
RA	3,213,031	T→A	7.1%	L19M (TTG→ATG)	mexC →	multidrug RND transporter membrane fusion protein MexC
RA	3,218,704:1	+C	5.8%	intergenic (+44/+39)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,218,711	Δ1 bp	5.9%	intergenic (+51/+32)	oprJ → / ← nfxB	outer membrane protein OprJ/HTH‑type transcriptional regulator NfxB
RA	3,218,828	T→A	9.9%	E158V (GAA→GTA)	nfxB ←	HTH‑type transcriptional regulator NfxB
RA	3,218,837	A→T	8.8%	V155D (GTC→GAC)	nfxB ←	HTH‑type transcriptional regulator NfxB
RA	3,236,191	G→T	5.7%	G415C (GGT→TGT) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,236,193	T→A	5.8%	G415G (GGT→GGA) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,238,188	T→G	6.3%	L195R (CTG→CGG)	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,190	T→A	6.3%	S196T (TCC→ACC) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,192	C→A	6.9%	S196S (TCC→TCA) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,252,535	G→A	8.0%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,540	T→C	7.5%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,253,091	C→G	6.2%	G132R (GGC→CGC)	PP_2851 ←	hypothetical protein
RA	3,253,096	C→G	6.7%	R130P (CGC→CCC)	PP_2851 ←	hypothetical protein
RA	3,277,853	T→G	7.0%	D104A (GAC→GCC)	ampC ←	beta‑lactamase
RA	3,287,319	T→C	12.8%	intergenic (+17/+24)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,287,320	G→A	12.2%	intergenic (+18/+23)	PP_2889 → / ← xthA	transmembrane regulator PrtR/exodeoxyribonuclease III/apurinic/apyrimidinic endodeoxyribonuclease VI
RA	3,296,544	T→C	7.8%	Q125R (CAG→CGG) ‡	PP_2898 ←	hypothetical protein
RA	3,296,545	G→A	9.9%	Q125* (CAG→TAG) ‡	PP_2898 ←	hypothetical protein
RA	3,308,076	T→C	5.5%	R80R (CGT→CGC)	csiD →	carbon starvation induced protein
RA	3,312,344	A→C	6.1%	D179A (GAC→GCC)	PP_2912 →	hypothetical protein
RA	3,312,732	T→A	6.1%	intergenic (+30/‑132)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,313,139	C→T	5.2%	S92S (AGC→AGT)	hemB →	5‑aminolevulinate dehydratase
RA	3,313,868	C→A	16.0%	intergenic (+30/‑129)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,313,871	T→G	15.1%	intergenic (+33/‑126)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,319,175	T→A	9.1%	intergenic (‑96/+96)	treSA ← / ← PP_2919	trehalose synthase A/LysR family transcriptional regulator
RA	3,319,176	T→A	9.1%	intergenic (‑97/+95)	treSA ← / ← PP_2919	trehalose synthase A/LysR family transcriptional regulator
RA	3,344,389	C→G	7.8%	Q261H (CAG→CAC)	PP_2941 ←	hypothetical protein
RA	3,368,464	G→A	5.8%	R576H (CGC→CAC)	PP_2964 →	transposase
RA	3,380,748	T→C	6.7%	L126P (CTT→CCT)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,750	C→G	6.0%	Q127E (CAG→GAG) ‡	tnpT‑I →	cointegrate resolution protein T
RA	3,380,752	G→A	6.1%	Q127Q (CAG→CAA) ‡	tnpT‑I →	cointegrate resolution protein T
RA	3,422,853	Δ1 bp	7.3%	coding (968/2211 nt)	PP_3038 →	TraC domain‑containing protein
RA	3,422,855:1	+G	7.5%	coding (970/2211 nt)	PP_3038 →	TraC domain‑containing protein
RA	3,466,098	G→C	5.3%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,099	A→T	5.3%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,100	A→T	5.3%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,101	G→C	5.3%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,506,083	T→A	6.1%	intergenic (‑399/+82)	PP_3103 ← / ← PP_5574	hypothetical protein/hypothetical protein
RA	3,506,084	T→A	6.1%	intergenic (‑400/+81)	PP_3103 ← / ← PP_5574	hypothetical protein/hypothetical protein
RA	3,528,036	A→G	5.4%	S402G (AGC→GGC)	imuB →	DNA repair DNA linked protein
RA	3,528,039	C→T	8.1%	R403C (CGC→TGC)	imuB →	DNA repair DNA linked protein
RA	3,534,805	T→G	5.6%	intergenic (+49/‑106)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,534,820	C→A	5.7%	intergenic (+64/‑91)	atoB → / → PP_3124	3‑oxoacid CoA‑transferase subunit B/short chain fatty acid transporter
RA	3,541,345:1	+T	5.7%	coding (415/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,541,352	Δ1 bp	5.7%	coding (422/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,551,261	G→C	5.2%	D124H (GAT→CAT)	PP_3135 →	glycosyl transferase
RA	3,551,264	G→C	5.8%	G125R (GGC→CGC)	PP_3135 →	glycosyl transferase
RA	3,584,942	A→C	5.5%	intergenic (+46/‑89)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,620,134	G→A	5.3%	L88F (CTT→TTT)	PP_3190 ←	ornithine cyclodeaminase/mu‑crystallin family protein
RA	3,624,187	G→C	6.6%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,628,125	C→G	10.3%	intergenic (+11/‑129)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,644,991	C→T	6.6%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,644,994	A→G	6.3%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,688,218	Δ1 bp	6.8%	coding (292/1107 nt)	PP_3253 →	carboxylate‑amine ligase
RA	3,688,223	G→T	7.3%	L99L (CTG→CTT)	PP_3253 →	carboxylate‑amine ligase
RA	3,688,230	A→C	6.7%	K102Q (AAG→CAG)	PP_3253 →	carboxylate‑amine ligase
RA	3,688,234:1	+A	6.9%	coding (308/1107 nt)	PP_3253 →	carboxylate‑amine ligase
RA	3,700,284	G→T	5.2%	H68N (CAC→AAC)	ybhP‑I ←	phosphohydrolase
RA	3,711,881	A→G	6.4%	V48A (GTG→GCG)	paaB ←	ring 1,2‑phenylacetyl‑CoA epoxidase regulatory subunit
RA	3,762,985	A→T	5.4%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,763,545	A→G	6.3%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,547	G→C	6.1%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,549	C→T	6.1%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,793,935	A→T	8.0%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,940	A→T	8.1%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,798,742:1	+A	5.4%	coding (201/831 nt)	PP_3358 ←	hydroxycinnamoyl‑CoA hydratase‑lyase
RA	3,798,747	A→T	5.6%	W66R (TGG→AGG)	PP_3358 ←	hydroxycinnamoyl‑CoA hydratase‑lyase
RA	3,851,001	A→C	5.9%	N147H (AAT→CAT)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,851,004	G→T	5.7%	G148C (GGC→TGC)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,853,822	A→G	5.9%	intergenic (+61/+21)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,861,202	C→A	5.2%	R27R (CGC→CGA)	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,863,883	C→T	8.0%	P921L (CCA→CTA) ‡	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,863,884	A→G	7.5%	P921P (CCA→CCG) ‡	PP_3413 →	two‑component system sensor histidine kinase/response regulator
JC	3,866,497	Δ14 bp	18.4%	coding (412‑425/1020 nt)	PP_3415 ←	LacI family transcriptional regulator
RA	3,882,857	A→G	8.7%	intergenic (+56/‑169)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,882,868	C→T	7.4%	intergenic (+67/‑158)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,892,965	T→G	5.5%	H95Q (CAT→CAG)	rarD →	chloramphenicol‑sensitive protein
RA	3,920,314	A→G	7.1%	L499P (CTG→CCG)	acs ←	acyl‑CoA synthetase
RA	3,920,317	C→T	7.3%	R498Q (CGG→CAG)	acs ←	acyl‑CoA synthetase
RA	3,941,121:1	+A	5.0%	coding (123/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,968,923	C→T	10.4%	S336F (TCC→TTC)	PP_3498 →	transposase
RA	3,982,021	A→T	6.6%	noncoding (28/207 nt)	PP_mr43 ←	Cobalamin regulatory region
RA	3,982,879	G→T	5.9%	G118G (GGG→GGT)	PP_3510 →	hypothetical protein
RA	3,984,085	C→T	5.7%	intergenic (+35/+155)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,086	A→G	5.8%	intergenic (+36/+154)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,087	A→C	6.7%	intergenic (+37/+153)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,995,396	A→T	7.1%	intergenic (‑117/+33)	PP_3521 ← / ← PP_3522	membrane protein/hypothetical protein
RA	3,995,397	A→T	6.9%	intergenic (‑118/+32)	PP_3521 ← / ← PP_3522	membrane protein/hypothetical protein
RA	3,996,941	G→T	5.2%	P89H (CCT→CAT)	PP_3525 ←	hypothetical protein
RA	3,996,944	A→C	5.4%	M88R (ATG→AGG)	PP_3525 ←	hypothetical protein
RA	4,002,726	A→G	6.1%	intergenic (+29/‑61)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,002,727	C→G	6.1%	intergenic (+30/‑60)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,002,728	C→T	6.5%	intergenic (+31/‑59)	allE → / → PP_3531	S‑ureidoglycine aminohydrolase/hypothetical protein
RA	4,043,929	G→A	5.9%	S13N (AGC→AAC)	PP_3565 →	LysE family transporter
RA	4,049,951	A→G	32.0%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	32.1%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	32.1%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,050,054	C→A	5.8%	L15M (CTG→ATG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,050,055	T→G	6.2%	L15R (CTG→CGG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,051,296	C→G	5.7%	intergenic (+16/+27)	oprB‑III → / ← PP_3571	carbohydrate‑selective porin/acetylornithine deacetylase
RA	4,053,520	A→T	6.2%	Q17L (CAG→CTG)	PP_3573 →	monooxygenase
RA	4,063,045	C→G	5.3%	E446D (GAG→GAC) ‡	PP_3581 ←	membrane protein
RA	4,063,046	T→A	6.2%	E446V (GAG→GTG) ‡	PP_3581 ←	membrane protein
RA	4,063,047	C→G	5.3%	E446Q (GAG→CAG) ‡	PP_3581 ←	membrane protein
RA	4,128,148	A→T	6.1%	Q158L (CAG→CTG)	htrG →	signal transduction protein
RA	4,128,188	C→G	5.7%	A171A (GCC→GCG)	htrG →	signal transduction protein
RA	4,143,926	T→A	11.1%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,143,927	T→A	11.1%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,165,671	C→T	5.3%	G159R (GGG→AGG)	PP_3666 ←	MHS family metabolite MFS transporter
RA	4,165,672	A→G	5.0%	P158P (CCT→CCC)	PP_3666 ←	MHS family metabolite MFS transporter
RA	4,166,929:1	+C	5.7%	coding (591/1212 nt)	creA ←	creatinase
RA	4,166,934	Δ1 bp	5.9%	coding (586/1212 nt)	creA ←	creatinase
RA	4,196,346	T→G	6.8%	intergenic (+144/+225)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,233,497	G→A	5.1%	intergenic (+130/+100)	PP_5626 → / ← PP_3711	repressor‑like DNA‑binding domain‑containing protein/diguanylate cyclase
RA	4,248,553	A→G	5.3%	S506S (AGT→AGC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,559	C→T	5.0%	V504V (GTG→GTA)	PP_3724 ←	acyl‑CoA synthetase
RA	4,252,234	A→G	5.8%	intergenic (‑158/+82)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,252,238	C→A	7.4%	intergenic (‑162/+78)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,252,241	A→G	6.7%	intergenic (‑165/+75)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,252,246	G→C	6.6%	intergenic (‑170/+70)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,264,956	T→A	7.7%	L42Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,962	A→T	8.2%	D44V (GAC→GTC)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,264,968	T→A	9.2%	L46Q (CTG→CAG)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,267,990	A→T	5.7%	intergenic (‑89/+14)	galP‑IV ← / ← PP_3740	porin‑like protein/MFS transporter
RA	4,298,936	T→A	6.3%	intergenic (+47/+44)	PP_3770 → / ← PP_3771	hypothetical protein/hypothetical protein
RA	4,301,115	C→T	5.1%	A79V (GCC→GTC)	PP_3774 →	hypothetical protein
RA	4,314,775	Δ1 bp	9.4%	coding (933/1209 nt)	aspC →	aminotransferase
RA	4,314,779:1	+T	9.1%	coding (937/1209 nt)	aspC →	aminotransferase
RA	4,338,437	T→A	6.4%	intergenic (+13/+129)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,447	T→C	7.3%	intergenic (+23/+119)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,448	G→A	7.3%	intergenic (+24/+118)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,458	T→A	8.8%	intergenic (+34/+108)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,537	A→T	10.2%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,538	A→T	10.4%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,348,749	A→G	47.9%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,353,340	C→G	11.0%	P141R (CCG→CGG)	yrpB →	2‑nitropropane dioxygenase
RA	4,360,328	Δ1 bp	5.7%	coding (838/1161 nt)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,333	G→C	6.0%	A278G (GCC→GGC)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,363,476	T→A	5.3%	L173Q (CTG→CAG)	adhP →	alcohol dehydrogenase
RA	4,382,865	G→A	6.6%	intergenic (‑32/+230)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,382,866	T→C	6.1%	intergenic (‑33/+229)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,399,267	G→A	5.1%	P223S (CCG→TCG)	PP_3878 ←	minor capsid protein C
RA	4,415,076	T→C	6.9%	intergenic (+141/+27)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,415,081	G→A	7.8%	intergenic (+146/+22)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,425,183	G→C	5.1%	intergenic (‑197/‑603)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,185	G→C	6.5%	intergenic (‑199/‑601)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,442,672	C→G	6.2%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,673	C→G	6.2%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,458,791	A→T	5.8%	intergenic (+39/‑229)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,794	C→T	5.7%	intergenic (+42/‑226)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,795	A→G	5.9%	intergenic (+43/‑225)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,798	A→T	5.6%	intergenic (+46/‑222)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,463,997	A→T	6.1%	*139C (TGA→TGT)	PP_3956 →	hypothetical protein
RA	4,464,000	G→C	6.3%	intergenic (+3/+25)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,464,003	A→T	6.4%	intergenic (+6/+22)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,469,023	G→C	5.8%	A408A (GCG→GCC)	PP_3959 →	voltage‑gated chloride channel family protein
RA	4,469,026	G→C	5.8%	A409A (GCG→GCC)	PP_3959 →	voltage‑gated chloride channel family protein
RA	4,475,342	C→A	5.4%	D80Y (GAC→TAC)	PP_3964 ←	transposase
RA	4,484,946	G→A	7.6%	L26L (CTG→CTA)	PP_3977 →	hypothetical protein
RA	4,503,833	C→T	15.0%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,834	A→G	14.7%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,524,569	G→A	5.4%	intergenic (+148/‑45)	idh → / → PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
RA	4,530,069	T→A	13.2%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,070	T→A	13.7%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,584,198	G→A	5.5%	P477L (CCG→CTG)	glgE ←	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
RA	4,705,459	T→A	8.2%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	8.2%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,470	A→G	6.4%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,471	G→A	6.7%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,724,029	A→G	5.2%	F45L (TTC→CTC)	yigI ←	hypothetical protein
RA	4,740,884	C→G	10.1%	intergenic (+75/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,886	T→A	11.1%	intergenic (+77/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,887	T→A	11.0%	intergenic (+78/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,889	C→G	10.8%	intergenic (+80/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,273:1	+C	80.4%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	19.5%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	80.5%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	C→G	11.5%	intergenic (+467/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	88.8%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	88.7%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,284	A→G	11.0%	intergenic (+475/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	A→C	90.3%	intergenic (+476/+276)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,286	C→T	90.7%	intergenic (+477/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,286:1	+T	9.8%	intergenic (+477/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	62.3%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	37.5%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	37.4%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	61.8%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	37.5%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	Δ1 bp	62.3%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,758,181	G→C	8.9%	R470P (CGC→CCC)	ompQ →	outer membrane pyoverdine efflux protein
RA	4,758,186	G→C	8.3%	intergenic (+1/+20)	ompQ → / ← pvdP	outer membrane pyoverdine efflux protein/pyoverdine biosynthesis‑like protein
RA	4,758,192	A→G	8.2%	intergenic (+7/+14)	ompQ → / ← pvdP	outer membrane pyoverdine efflux protein/pyoverdine biosynthesis‑like protein
RA	4,777,693	T→C	5.2%	Q540R (CAG→CGG)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,796,649	A→G	12.5%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,657	C→T	15.9%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,659	G→C	17.4%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,662	G→C	13.7%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,664	A→G	14.9%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,672	C→T	12.9%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,808,234	G→C	8.4%	intergenic (‑298/‑257)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,808,237	G→C	8.2%	intergenic (‑301/‑254)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,812,228	C→T	6.3%	intergenic (+103/‑290)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,229	A→T	6.6%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,230	A→G	6.5%	intergenic (+105/‑288)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,826,672	G→A	6.2%	L1521L (CTC→CTT)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,842,941	Δ1 bp	23.3%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	20.7%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,896,422	C→T	7.1%	intergenic (+10/‑198)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,900,110	A→G	10.2%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	10.0%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	9.6%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	9.6%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,906,508	A→T	8.2%	L112Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,906,511	A→T	8.2%	L111Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,909,966	C→G	8.3%	intergenic (+314/+165)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,909,967	C→G	8.3%	intergenic (+315/+164)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,918,010	G→A	5.2%	V122I (GTC→ATC) ‡	PP_4328 →	hypothetical protein
RA	4,918,011	T→C	5.2%	V122A (GTC→GCC) ‡	PP_4328 →	hypothetical protein
RA	4,941,055	C→T	21.1%	H154H (CAC→CAT)	PP_4348 →	cystathionine beta‑lyase
RA	4,945,292	G→A	5.1%	intergenic (+607/+191)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,310	A→G	6.3%	intergenic (+625/+173)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,325	C→G	5.7%	intergenic (+640/+158)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,327	C→G	5.6%	intergenic (+642/+156)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,329	T→C	5.7%	intergenic (+644/+154)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,331	C→T	6.0%	intergenic (+646/+152)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,332	A→G	7.3%	intergenic (+647/+151)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,333	C→T	6.0%	intergenic (+648/+150)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,342	T→C	5.3%	intergenic (+657/+141)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,372	C→A	5.1%	intergenic (+687/+111)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,374	G→T	5.1%	intergenic (+689/+109)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,377	C→T	5.0%	intergenic (+692/+106)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,951,017	T→G	14.3%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,951,018	C→A	13.2%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	5,041,297	T→A	6.0%	intergenic (+227/‑435)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,041,300	T→A	6.1%	intergenic (+230/‑432)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,077,282	G→T	9.7%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,285	A→C	10.6%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,103,577	C→A	5.4%	intergenic (+143/‑246)	PP_5694 → / → yhhS	hypothetical protein/carbohydrate efflux transporter
RA	5,162,617	C→T	5.1%	intergenic (+92/+109)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,172,353	T→C	8.3%	T219A (ACC→GCC)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,360	G→A	7.9%	G216G (GGC→GGT)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,292	T→C	9.6%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,295	G→C	10.2%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,296	G→C	10.2%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,299	G→A	9.8%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,182,107	G→T	10.3%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,113	T→G	11.8%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,114	C→A	11.9%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,120	A→C	12.9%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,192,797	C→G	5.5%	intergenic (+130/‑72)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,192,806	C→G	5.3%	intergenic (+139/‑63)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,192,810	T→G	5.5%	intergenic (+143/‑59)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,194,935	T→G	13.8%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,936	C→A	13.0%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,229,227	G→A	7.1%	intergenic (‑121/+55)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,239	Δ1 bp	10.6%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,243	C→G	10.6%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,246	C→G	10.2%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,249:1	+C	10.9%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,261	T→C	5.0%	intergenic (‑155/+21)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,313,324	C→G	6.9%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,313,327	C→G	7.0%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,336,791	Δ1 bp	6.9%	coding (193/1443 nt)	PP_4696 →	nitrogen regulation protein NR(I)
RA	5,338,086	A→G	7.9%	intergenic (+45/‑239)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,098	C→G	13.6%	intergenic (+57/‑227)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,101	C→G	13.6%	intergenic (+60/‑224)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,344,515	C→G	5.9%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	6.1%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	7.7%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	7.7%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,537	Δ1 bp	8.1%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,538	Δ1 bp	8.1%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,350,524	G→C	5.6%	intergenic (+13/+69)	PP_4704 → / ← PP_4705	hypothetical protein/glyoxalase
RA	5,351,422	C→G	6.9%	intergenic (+53/+23)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,351,423	C→G	6.2%	intergenic (+54/+22)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,354,719	G→A	5.3%	T7I (ACC→ATC)  noncoding (4/97 nt)	rpsO ← PP_mr54 ←	30S ribosomal protein S15 S15 regulatory region
RA	5,361,119	A→T	8.8%	intergenic (‑78/+23)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,361,120	A→T	8.8%	intergenic (‑79/+22)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,368,718	G→T	8.1%	R14S (CGC→AGC)	greA ←	transcription elongation factor GreA
RA	5,368,719	A→C	8.4%	A13A (GCT→GCG)	greA ←	transcription elongation factor GreA
RA	5,370,215	C→A	5.7%	A590A (GCG→GCT)	carB ←	carbamoyl‑phosphate synthase large subunit
RA	5,381,315	T→C	6.3%	intergenic (+32/+33)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,316	T→A	6.3%	intergenic (+33/+32)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,317	G→A	6.7%	intergenic (+34/+31)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,432,059	G→A	8.8%	V203M (GTG→ATG) ‡	PP_4771 →	membrane protein
RA	5,432,060	T→C	7.9%	V203A (GTG→GCG) ‡	PP_4771 →	membrane protein
RA	5,432,805	C→G	6.0%	R836T (AGG→ACG) ‡	hrpB ←	ATP‑dependent helicase HrpB
RA	5,432,806	T→A	6.8%	R836W (AGG→TGG) ‡	hrpB ←	ATP‑dependent helicase HrpB
RA	5,432,812	T→C	5.8%	T834A (ACC→GCC)	hrpB ←	ATP‑dependent helicase HrpB
RA	5,432,813	A→C	6.6%	A833A (GCT→GCG)	hrpB ←	ATP‑dependent helicase HrpB
RA	5,432,817	T→A	5.4%	E832V (GAG→GTG) ‡	hrpB ←	ATP‑dependent helicase HrpB
RA	5,432,818	C→G	5.6%	E832Q (GAG→CAG) ‡	hrpB ←	ATP‑dependent helicase HrpB
RA	5,448,382	C→T	6.3%	A104V (GCC→GTC)	PP_4785 →	hypothetical protein
RA	5,451,660	A→G	7.2%	E48G (GAG→GGG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,664	C→G	7.2%	L49L (CTC→CTG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,668	C→T	7.1%	P51S (CCG→TCG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,458,940:1	+A	6.1%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,946	Δ1 bp	6.7%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,459,609	C→A	5.5%	intergenic (+19/‑21)	PP_4795 → / → holA	lipoprotein/DNA polymerase III subunit delta
RA	5,460,988	C→T	5.9%	S35S (AGC→AGT)	PP_4797 →	hypothetical protein
RA	5,472,204	T→A	7.9%	K95M (AAG→ATG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,472,205	T→A	7.8%	K95* (AAG→TAG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,478,431	C→T	100%	V45I (GTA→ATA)	PP_4815 ←	membrane protein
RA	5,512,951	C→G	5.3%	A180G (GCC→GGC)	urtD →	ABC transporter ATP‑binding protein
RA	5,537,123	G→C	5.1%	intergenic (+52/+51)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,545,683	T→C	14.8%	intergenic (‑775/+102)	rpsF ← / ← rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,549,653	T→A	12.7%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,654	T→A	12.8%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,552,962	T→A	5.1%	intergenic (+577/+84)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,963	C→A	5.4%	intergenic (+578/+83)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,558,426	T→G	5.1%	K293T (AAG→ACG)	purA ←	adenylosuccinate synthetase
RA	5,584,299	G→T	5.6%	A495E (GCG→GAG)	parC ←	DNA topoisomerase IV subunit A
RA	5,592,486	C→G	6.5%	S127R (AGC→AGG)	PP_4920 →	lipoprotein
RA	5,592,489	C→G	6.5%	Y128* (TAC→TAG)	PP_4920 →	lipoprotein
RA	5,634,508	T→G	8.7%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,509	C→A	8.1%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,644,635:1	+G	7.7%	intergenic (+65/‑64)	yhiN → / → PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
RA	5,644,639	T→A	7.7%	intergenic (+69/‑60)	yhiN → / → PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
RA	5,644,643	Δ1 bp	7.7%	intergenic (+73/‑56)	yhiN → / → PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
RA	5,652,980	A→G	5.2%	intergenic (‑30/+131)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,652,988	T→G	5.9%	intergenic (‑38/+123)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,653,016	T→C	5.1%	intergenic (‑66/+95)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,653,023	T→C	5.7%	intergenic (‑73/+88)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,655,677:1	+A	27.9%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,682	T→G	32.3%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	29.6%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	21.9%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,667,309	G→T	9.7%	intergenic (+36/+35)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,667,310	A→C	8.7%	intergenic (+37/+34)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,668,099	T→C	6.1%	L15P (CTG→CCG)	ahcY →	adenosylhomocysteinase
RA	5,670,015	C→G	5.1%	H147Q (CAC→CAG)	metF →	5,10‑methylenetetrahydrofolate reductase
RA	5,670,016	C→G	5.1%	L148V (CTG→GTG)	metF →	5,10‑methylenetetrahydrofolate reductase
RA	5,684,860	G→C	5.2%	R697G (CGC→GGC)	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,740,513	G→A	8.7%	intergenic (+22/+49)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,523	T→G	19.1%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	18.9%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	18.9%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	18.8%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,540	T→C	11.3%	intergenic (+49/+22)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,746,541	G→C	10.0%	intergenic (+32/+67)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,746,544	G→C	10.0%	intergenic (+35/+64)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,772,208	G→T	5.3%	L271M (CTG→ATG)	betT‑I ←	choline transporter
RA	5,772,213	A→C	5.8%	I269S (ATC→AGC)	betT‑I ←	choline transporter
RA	5,790,676	A→T	8.2%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,790,681	A→T	7.8%	intergenic (‑29/+28)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,815,587	C→T	6.7%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,592	G→T	6.9%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,595	A→C	6.9%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,600	A→G	6.9%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,816,909	A→G	5.2%	intergenic (+39/+90)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,824,769	T→A	5.4%	intergenic (+137/+37)	PP_5102 → / ← trmB	hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB
RA	5,824,771	C→A	5.6%	intergenic (+139/+35)	PP_5102 → / ← trmB	hypothetical protein/tRNA (guanosine(46)‑N7)‑methyltransferase TrmB
RA	5,845,651:1	+A	9.7%	intergenic (+20/‑82)	coaD → / → yfhL	phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein
RA	5,845,658	Δ1 bp	6.1%	intergenic (+27/‑75)	coaD → / → yfhL	phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein
RA	5,846,014	A→G	5.0%	intergenic (+30/+61)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,883,651	C→G	5.3%	A60G (GCC→GGC)	PP_5157 →	hypothetical protein
RA	5,890,847	A→C	11.8%	intergenic (+79/+41)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,848	A→T	10.7%	intergenic (+80/+40)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,849	G→T	11.1%	intergenic (+81/+39)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,898,657	G→A	5.6%	P763S (CCT→TCT)	PP_5173 ←	RND family transporter
RA	5,900,364	A→G	6.7%	S194P (TCC→CCC)	PP_5173 ←	RND family transporter
RA	5,903,220	G→T	14.8%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,221	A→C	16.3%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,914,212	T→C	5.7%	intergenic (+48/+105)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,948,729:1	+G	8.0%	intergenic (‑54/+28)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,948,738	T→A	16.7%	intergenic (‑63/+19)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,948,739	T→A	16.7%	intergenic (‑64/+18)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,984,492	T→C	11.1%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,498	G→A	10.2%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,500	T→C	10.5%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,503	G→A	9.6%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,505	T→C	12.5%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,511	G→A	9.4%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,535	A→G	5.5%	intergenic (+75/+14)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,988,865	G→A	16.5%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	15.6%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	16.3%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	16.1%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	16.9%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	15.2%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	15.2%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	15.7%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	15.7%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	15.5%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	15.5%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	15.4%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	24.5%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	23.6%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	23.7%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	26.6%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	26.9%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,994,811	Δ1 bp	5.7%	coding (1482/1599 nt)	PP_5251 →	transporter
RA	5,994,817	G→C	5.1%	V496V (GTG→GTC)	PP_5251 →	transporter
RA	5,997,245:1	+G	18.8%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,250	Δ1 bp	18.9%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,005,043	T→G	8.8%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,050	G→C	10.1%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,053	A→T	10.8%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,056	G→C	10.6%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,063	C→A	10.9%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,023,215	G→A	5.7%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,216	T→C	5.8%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,040,850	T→A	10.4%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,043,722	T→A	5.8%	intergenic (+18/+16)	gmk → / ← PP_5297	deoxyguanylate kinase/guanylate kinase/amino acid transporter
RA	6,066,725	C→T	6.0%	L265L (CTG→TTG)	phoR →	two‑component system sensor histidine kinase
JC	6,098,315	Δ9 bp	100%	coding (822‑830/867 nt)	PP_5350 ←	RpiR family transcriptional regulator
RA	6,130,169	G→C	6.9%	A107G (GCC→GGC)	PP_5378 ←	metal‑binding protein
RA	6,165,226	T→A	5.9%	E38V (GAA→GTA)	PP_5405 ←	transposase
RA	6,174,764	G→T	9.1%	intergenic (‑70/+49)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,174,765	A→C	8.1%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	171330–172965	176343–172967	3–5014	41 [39]	[40] 42	PP_16SA–[PP_5SA]	PP_16SA,PP_23SA,[PP_5SA]
*	*	÷	NC_002947	176607–178395	181731–178397	3–5125	41 [40]	[36] 42	PP_16SB–[PP_r01]	PP_16SB,PP_23SB,[PP_r01]
*	*	÷	NC_002947	4808205	4808218	14	60 [0]	[0] 76	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 42650	66 (0.750)	4 (0.050)	4/234	NT	6.2%	coding (594/1026 nt)	PP_0039	hypothetical protein
	?	NC_002947	= 42663	59 (0.710)					coding (607/1026 nt)	PP_0039	hypothetical protein
*	?	NC_002947	= 65528	81 (0.920)	6 (0.070)	6/232	NT	7.3%	coding (586/1653 nt)	betA‑I	choline dehydrogenase
	?	NC_002947	= 65534	77 (0.930)					coding (592/1653 nt)	betA‑I	choline dehydrogenase
*	?	NC_002947	= 74499	120 (1.360)	5 (0.070)	3/200	NT	6.3%	intergenic (+87/+11)	PP_0063/PP_0064	lipid A biosynthesis lauroyl acyltransferase/hypothetical protein
	?	NC_002947	5897872 =	51 (0.720)					intergenic (‑216/+18)	PP_5172/PP_5173	hypothetical protein/RND family transporter
*	?	NC_002947	85049 =	97 (1.100)	12 (0.160)	11/214	NT	11.7%	intergenic (+27/+103)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
	?	NC_002947	85122 =	97 (1.280)					intergenic (+100/+30)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
*	?	NC_002947	= 85065	101 (1.140)	6 (0.080)	6/214	NT	6.1%	intergenic (+43/+87)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
	?	NC_002947	= 85104	97 (1.280)					intergenic (+82/+48)	aroE/PP_0075	shikimate 5‑dehydrogenase/choline sulfate transporter
*	?	NC_002947	86750 =	108 (1.220)	11 (0.140)	11/216	NT	11.3%	intergenic (‑33/+112)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	86841 =	79 (1.030)					intergenic (‑124/+21)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	95622 =	74 (0.840)	7 (0.090)	7/230	NT	9.4%	intergenic (+14/+58)	PP_0087/PP_0088	hypothetical protein/alkanal monooxygenase
	?	NC_002947	95674 =	67 (0.820)					intergenic (+66/+6)	PP_0087/PP_0088	hypothetical protein/alkanal monooxygenase
*	?	NC_002947	123578 =	110 (1.250)	7 (0.080)	6/236	NT	6.6%	coding (290/783 nt)	znuB	zinc ABC transporter permease
	?	NC_002947	123598 =	93 (1.110)					coding (270/783 nt)	znuB	zinc ABC transporter permease
*	?	NC_002947	170824 =	81 (0.920)	5 (0.060)	7/220	NT	6.8%	intergenic (+5/‑565)	PP_0159/PP_16SA	family III CoA‑transferase/16S ribosomal RNA
	?	NC_002947	170856 =	65 (0.830)					intergenic (+37/‑533)	PP_0159/PP_16SA	family III CoA‑transferase/16S ribosomal RNA
*	?	NC_002947	= 174142	NA (NA)	7 (0.080)	6/240	NT	NA	noncoding (940/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	= 174160	NA (NA)					noncoding (958/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 174474	NA (NA)	17 (0.200)	14/234	NT	NA	noncoding (1272/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	= 174479	NA (NA)					noncoding (1277/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	36 (0.430) +CGAAA	19/238	NT	30.1%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	87 (0.990)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	= 182052	98 (1.110)	5 (0.060) +GGTT	4/240	NT	6.9%	intergenic (+41/+24)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
	?	NC_002947	5307483 =	41 (0.460)					intergenic (‑184/+2)	recC/PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
*	?	NC_002947	195222 =	95 (1.080)	5 (0.060)	5/230	NT	5.8%	coding (728/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	195247 =	74 (0.900)					coding (753/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	202783 =	95 (1.080)	8 (0.090)	7/238	NT	11.4%	coding (8289/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	206823 =	33 (0.390)					coding (12329/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	221190 =	58 (0.660)	7 (0.080)	7/236	NT	10.9%	intergenic (+160/‑39)	PP_5431/PP_0169	hypothetical protein/TauD/TfdA family dioxygenase
	?	NC_002947	221212 =	59 (0.700)					intergenic (+182/‑17)	PP_5431/PP_0169	hypothetical protein/TauD/TfdA family dioxygenase
*	?	NC_002947	= 226123	112 (1.270)	6 (0.070)	6/232	NT	5.6%	coding (349/819 nt)	PP_0174	hypothetical protein
	?	NC_002947	= 226140	97 (1.180)					coding (366/819 nt)	PP_0174	hypothetical protein
*	?	NC_002947	227282 =	93 (1.050)	6 (0.070)	6/242	NT	5.6%	coding (108/2088 nt)	PP_0176	putative efflux transporter
	?	NC_002947	227306 =	110 (1.280)					coding (132/2088 nt)	PP_0176	putative efflux transporter
*	?	NC_002947	235331 =	101 (1.140)	13 (0.170)	8/216	NT	13.7%	intergenic (+28/+97)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235390 =	76 (0.990)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	274134 =	84 (0.950)	11 (0.130)	11/238	NT	11.7%	coding (436/801 nt)	PP_0221	methionine ABC transporter substrate‑binding protein
	?	NC_002947	274166 =	85 (1.000)					coding (404/801 nt)	PP_0221	methionine ABC transporter substrate‑binding protein
*	?	NC_002947	= 295713	131 (1.480)	8 (0.100)	8/220	NT	5.8%	intergenic (+60/+82)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	= 295744	144 (1.840)					intergenic (+91/+51)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 310001	69 (0.780)	8 (0.100)	8/230	NT	10.8%	intergenic (‑166/+31)	PP_0255/PP_0256	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 310014	68 (0.830)					intergenic (‑179/+18)	PP_0255/PP_0256	hypothetical protein/putative oxidoreductase
*	?	NC_002947	359670 =	125 (1.420)	10 (0.120)	9/236	NT	7.8%	intergenic (+27/+93)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
	?	NC_002947	359728 =	116 (1.380)					intergenic (+85/+35)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 371748	89 (1.010)	5 (0.060)	5/236	NT	5.3%	coding (1226/2061 nt)	dgcA	dimethylglycine dehydrogenase subunit
	?	NC_002947	= 371759	93 (1.110)					coding (1237/2061 nt)	dgcA	dimethylglycine dehydrogenase subunit
*	?	NC_002947	= 392757	109 (1.240)	6 (0.070)	6/242	NT	5.4%	intergenic (+13/‑62)	soxA/soxG	sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma
	?	NC_002947	= 392784	103 (1.200)					intergenic (+40/‑35)	soxA/soxG	sarcosine oxidase subunit alpha/sarcosine oxidase subunit gamma
*	?	NC_002947	= 394356	61 (0.690)	4 (0.060)	4/198	NT	6.3%	intergenic (+36/‑266)	purU‑I/fdhA	formyltetrahydrofolate deformylase/formaldehyde dehydrogenase
	?	NC_002947	= 394400	70 (1.000)					intergenic (+80/‑222)	purU‑I/fdhA	formyltetrahydrofolate deformylase/formaldehyde dehydrogenase
*	?	NC_002947	= 403269	90 (1.020)	9 (0.120)	8/218	NT	9.5%	intergenic (‑69/+100)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
	?	NC_002947	= 403299	92 (1.190)					intergenic (‑99/+70)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
*	?	NC_002947	413997 =	73 (0.830)	11 (0.160)	10/192	NT	20.7%	intergenic (+14/‑189)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	414083 =	28 (0.410)					intergenic (+100/‑103)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	429963 =	102 (1.160)	11 (0.130)	8/234	NT	10.3%	coding (420/711 nt)	PP_0353	exonuclease
	?	NC_002947	429987 =	96 (1.150)					coding (396/711 nt)	PP_0353	exonuclease
*	?	NC_002947	436353 =	62 (0.700)	4 (0.050)	4/230	NT	7.2%	intergenic (+183/+50)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	436386 =	45 (0.550)					intergenic (+216/+17)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
*	?	NC_002947	456680 =	67 (0.760)	4 (0.050)	4/236	NT	6.0%	coding (1074/1131 nt)	pqqE	coenzyme PQQ synthesis protein E
	?	NC_002947	456710 =	62 (0.740)					coding (1044/1131 nt)	pqqE	coenzyme PQQ synthesis protein E
*	?	NC_002947	519639 =	85 (0.960)	7 (0.080)	6/238	NT	8.1%	coding (1025/1035 nt)	argC	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
	?	NC_002947	519661 =	78 (0.920)					intergenic (+12/‑88)	argC/erpA	N‑acetyl‑gamma‑glutamyl‑phosphate reductase/iron‑sulfur cluster insertion protein ErpA
*	?	NC_002947	535037 =	101 (1.140)	5 (0.060)	7/228	NT	5.0%	intergenic (+19/‑101)	nusG/rplK	transcription antipausing factor NusG/50S ribosomal protein L11
	?	NC_002947	535064 =	96 (1.180)					intergenic (+46/‑74)	nusG/rplK	transcription antipausing factor NusG/50S ribosomal protein L11
*	?	NC_002947	603652 =	88 (1.000)	6 (0.070)	6/230	NT	7.1%	intergenic (+45/‑47)	ribAB‑I/ribH	bifunctional 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/GTP cyclohydrolase II/6,7‑dimethyl‑8‑ribityllumazine synthase
	?	NC_002947	603676 =	75 (0.920)					intergenic (+69/‑23)	ribAB‑I/ribH	bifunctional 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/GTP cyclohydrolase II/6,7‑dimethyl‑8‑ribityllumazine synthase
*	?	NC_002947	= 608667	78 (0.880)	5 (0.060)	5/238	NT	6.1%	coding (535/813 nt)	PP_0524	cobalamin‑binding protein HutB
	?	NC_002947	= 608679	79 (0.930)					coding (547/813 nt)	PP_0524	cobalamin‑binding protein HutB
*	?	NC_002947	= 650233	74 (0.840)	4 (0.050)	4/238	NT	5.6%	intergenic (‑74/+26)	accB/aroQ‑I	acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase
	?	NC_002947	= 650249	65 (0.770)					intergenic (‑90/+10)	accB/aroQ‑I	acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase
*	?	NC_002947	= 652785	92 (1.040)	44 (0.600)	32/208	NT	53.3%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	726915 =	79 (0.900)	8 (0.090) +G	4/246	NT	8.4%	intergenic (‑159/+108)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	2957187 =	96 (1.090)					intergenic (+99/‑97)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	745456 =	NA (NA)	3 (0.040)	3/240	NT	NA	coding (1046/1533 nt)	PP_0637	transposase
	?	NC_002947	745481 =	NA (NA)					coding (1021/1533 nt)	PP_0637	transposase
*	?	NC_002947	771606 =	96 (1.090)	5 (0.060)	5/236	NT	5.1%	coding (1287/1389 nt)	PP_0662	threonine synthase
	?	NC_002947	771634 =	93 (1.110)					coding (1315/1389 nt)	PP_0662	threonine synthase
*	?	NC_002947	= 799850	98 (1.110)	6 (0.070)	6/236	NT	5.4%	coding (626/969 nt)	ispB	octaprenyl diphosphate synthase
	?	NC_002947	= 799870	115 (1.370)					coding (606/969 nt)	ispB	octaprenyl diphosphate synthase
*	?	NC_002947	836205 =	92 (1.040)	9 (0.110)	8/226	NT	10.3%	intergenic (‑124/+53)	PP_0718/ychF	sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase
	?	NC_002947	836237 =	73 (0.910)					intergenic (‑156/+21)	PP_0718/ychF	sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase
*	?	NC_002947	= 837839	73 (0.830)	6 (0.070)	6/242	NT	7.2%	coding (129/585 nt)	pth	peptidyl‑tRNA hydrolase
	?	NC_002947	= 837870	84 (0.980)					coding (98/585 nt)	pth	peptidyl‑tRNA hydrolase
*	?	NC_002947	850440 =	43 (0.490)	4 (0.050)	5/238	NT	8.6%	intergenic (‑20/‑785)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
	?	NC_002947	850461 =	44 (0.520)					intergenic (‑41/‑764)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
*	?	NC_002947	850934 =	111 (1.260)	5 (0.060)	5/238	NT	5.1%	intergenic (‑514/‑291)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
	?	NC_002947	851020 =	80 (0.950)					intergenic (‑600/‑205)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
*	?	NC_002947	875925 =	81 (0.920)	4 (0.050)	4/228	NT	5.4%	intergenic (‑31/+56)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY
	?	NC_002947	875974 =	65 (0.800)					intergenic (‑80/+7)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY
*	?	NC_002947	= 917715	83 (0.940)	8 (0.100)	7/226	NT	9.3%	intergenic (‑146/+53)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
	?	NC_002947	= 917731	80 (1.000)					intergenic (‑162/+37)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
*	?	NC_002947	1016395 =	86 (0.970)	5 (0.060)	5/234	NT	5.4%	coding (714/825 nt)	PP_0876	AraC family transcriptional regulator
	?	NC_002947	1016444 =	95 (1.140)					coding (665/825 nt)	PP_0876	AraC family transcriptional regulator
*	?	NC_002947	1022665 =	85 (0.960)	4 (0.050)	4/230	NT	5.1%	coding (1051/1635 nt)	dppA‑I	dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1022695 =	71 (0.870)					coding (1021/1635 nt)	dppA‑I	dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1025270 =	72 (0.820)	3 (0.040)	3/194	NT	6.2%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	34 (0.490)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1037774 =	107 (1.210)	5 (0.070)	5/202	NT	6.5%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	56 (0.780)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1068110	105 (1.190)	9 (0.110)	10/234	NT	8.0%	coding (273/948 nt)	PP_0926	membrane protein
	?	NC_002947	= 1068121	107 (1.290)					coding (284/948 nt)	PP_0926	membrane protein
*	?	NC_002947	= 1076838	66 (0.750)	14 (0.170)	12/238	NT	17.4%	coding (212/999 nt)	mreC	cell shape‑determining protein MreC
	?	NC_002947	= 1076858	70 (0.830)					coding (232/999 nt)	mreC	cell shape‑determining protein MreC
*	?	NC_002947	1083140 =	90 (1.020)	6 (0.070)	5/232	NT	7.0%	coding (2790/3822 nt)	PP_0938	hypothetical protein
	?	NC_002947	1083180 =	75 (0.910)					coding (2830/3822 nt)	PP_0938	hypothetical protein
*	?	NC_002947	= 1094112	75 (0.850)	7 (0.080)	7/242	NT	7.8%	coding (60/465 nt)	ptsN	phosphotransferase system subunit IIA
	?	NC_002947	= 1094147	92 (1.070)					coding (25/465 nt)	ptsN	phosphotransferase system subunit IIA
*	?	NC_002947	1098124 =	115 (1.300)	9 (0.110)	7/240	NT	7.4%	coding (460/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
	?	NC_002947	1098151 =	115 (1.350)					coding (433/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
*	?	NC_002947	1114875 =	31 (0.350)	16 (0.230)	14/198	NT	32.4%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114951 =	42 (0.600)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	= 1114899	34 (0.390)	9 (0.130)	9/198	NT	20.7%	intergenic (‑88/+91)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	= 1114925	42 (0.600)					intergenic (‑114/+65)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	= 1149945	66 (0.750)	4 (0.050) +GCCAACACCGT	4/226	NT	5.8%	intergenic (‑186/+71)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	4333121 =	76 (0.860)					intergenic (+17/+67)	PP_3804/yaiW	hypothetical protein/lipoprotein
*	?	NC_002947	1170746 =	87 (0.990)	6 (0.070)	6/240	NT	5.4%	intergenic (‑331/+102)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
	?	NC_002947	1170839 =	125 (1.460)					intergenic (‑424/+9)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
*	?	NC_002947	1213409 =	88 (1.000)	6 (0.070)	5/244	NT	6.7%	coding (3556/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1213434 =	81 (0.930)					coding (3531/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	= 1251046	89 (1.010)	5 (0.060)	5/240	NT	5.2%	coding (231/549 nt)	PP_1093	electron transport complex protein
	?	NC_002947	= 1251068	98 (1.150)					coding (209/549 nt)	PP_1093	electron transport complex protein
*	?	NC_002947	1298192 =	NA (NA)	9 (0.100)	6/246	NT	NA	intergenic (+45/+384)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	1298212 =	NA (NA)					intergenic (+65/+364)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	= 1362413	95 (1.080)	5 (0.060)	4/232	NT	5.1%	coding (797/1347 nt)	phoQ	sensor protein
	?	NC_002947	= 1362442	97 (1.180)					coding (826/1347 nt)	phoQ	sensor protein
*	?	NC_002947	1419553 =	31 (0.350)	7 (0.110)	6/184	NT	26.0%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	17 (0.260)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	25 (0.280)	8 (0.120)	7/184	NT	31.1%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	17 (0.260)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	1427331 =	NA (NA)	9 (0.110)	4/234	NT	NA	coding (1222/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	1427349 =	NA (NA)					coding (1240/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	1436018 =	100 (1.130)	8 (0.100)	7/236	NT	8.3%	intergenic (‑48/+105)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	1436109 =	81 (0.970)					intergenic (‑139/+14)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	1450592 =	107 (1.210)	6 (0.070)	6/240	NT	5.4%	intergenic (‑42/‑232)	PP_1269/PP_1270	universal stress protein family protein/LysR family transcriptional regulator
	?	NC_002947	1450689 =	105 (1.230)					intergenic (‑139/‑135)	PP_1269/PP_1270	universal stress protein family protein/LysR family transcriptional regulator
*	?	NC_002947	= 1452353	97 (1.100)	7 (0.080)	7/238	NT	6.6%	coding (508/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter
	?	NC_002947	= 1452371	104 (1.230)					coding (526/1542 nt)	PP_1271	putative Multidrug efflux MFS transporter
*	?	NC_002947	1465319 =	83 (0.940)	6 (0.070)	6/240	NT	6.8%	coding (306/1440 nt)	algX	alginate biosynthesis protein AlgX
	?	NC_002947	1465346 =	84 (0.980)					coding (279/1440 nt)	algX	alginate biosynthesis protein AlgX
*	?	NC_002947	1480639 =	86 (0.970)	4 (0.050)	4/236	NT	5.2%	coding (1106/1443 nt)	rhlB	ATP‑dependent RNA helicase RhlB
	?	NC_002947	1480673 =	65 (0.770)					coding (1072/1443 nt)	rhlB	ATP‑dependent RNA helicase RhlB
*	?	NC_002947	1487013 =	22 (0.250)	16 (0.240)	14/188	NT	48.8%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	17 (0.250)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	19 (0.220)	10 (0.150)	8/188	NT	38.9%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	17 (0.250)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	1499443 =	36 (0.410)	10 (0.140)	6/202	NT	22.9%	intergenic (+13/‑153)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	1499526 =	38 (0.530)					intergenic (+96/‑70)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 1499465	35 (0.400)	9 (0.130)	6/202	NT	21.3%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	38 (0.530)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 1531811	50 (0.570)	4 (0.060)	4/200	NT	7.2%	coding (107/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	= 1531859	63 (0.890)					coding (59/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	1551361 =	107 (1.210)	11 (0.130)	11/242	NT	9.8%	intergenic (+78/+48)	groL/pykA	chaperonin GroEL/pyruvate kinase II
	?	NC_002947	1551400 =	97 (1.130)					intergenic (+117/+9)	groL/pykA	chaperonin GroEL/pyruvate kinase II
*	?	NC_002947	1561044 =	91 (1.030)	6 (0.070)	6/240	NT	6.3%	coding (1089/1875 nt)	pctA	methyl‑accepting chemotaxis protein PctA
	?	NC_002947	1561078 =	89 (1.040)					coding (1055/1875 nt)	pctA	methyl‑accepting chemotaxis protein PctA
*	?	NC_002947	1570443 =	37 (0.420)	6 (0.090)	6/196	NT	15.3%	intergenic (+9/‑179)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
	?	NC_002947	1570521 =	37 (0.530)					intergenic (+87/‑101)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
*	?	NC_002947	= 1570468	38 (0.430)	4 (0.060)	4/196	NT	10.7%	intergenic (+34/‑154)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
	?	NC_002947	= 1570494	37 (0.530)					intergenic (+60/‑128)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
*	?	NC_002947	1622527 =	80 (0.910)	11 (0.150)	9/212	NT	14.5%	intergenic (+7/+59)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein
	?	NC_002947	1622577 =	61 (0.810)					intergenic (+57/+9)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein
*	?	NC_002947	1648974 =	84 (0.950)	8 (0.110)	7/214	NT	9.9%	intergenic (‑211/+85)	oprB‑II/PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
	?	NC_002947	1649030 =	73 (0.960)					intergenic (‑267/+29)	oprB‑II/PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
*	?	NC_002947	1707231 =	72 (0.820)	4 (0.050)	4/238	NT	5.5%	intergenic (+7/+135)	PP_1501/PP_1502	hypothetical protein/OmpA family protein
	?	NC_002947	1707251 =	69 (0.820)					intergenic (+27/+115)	PP_1501/PP_1502	hypothetical protein/OmpA family protein
*	?	NC_002947	1731205 =	22 (0.250)	13 (0.190)	10/192	NT	36.6%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	28 (0.410)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1731232	22 (0.250)	5 (0.070)	5/192	NT	18.2%	intergenic (‑103/+88)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731268	28 (0.410)					intergenic (‑139/+52)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	1748731 =	84 (0.950)	7 (0.080)	7/236	NT	7.9%	intergenic (‑22/‑310)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	1748774 =	83 (0.990)					intergenic (‑65/‑267)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
*	?	NC_002947	1750302 =	120 (1.360)	7 (0.090)	7/222	NT	6.2%	intergenic (‑25/‑64)	PP_1549/PP_1550	Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator
	?	NC_002947	1750339 =	104 (1.320)					intergenic (‑62/‑27)	PP_1549/PP_1550	Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator
*	?	NC_002947	1780109 =	39 (0.440)	19 (0.250)	14/210	NT	34.9%	intergenic (+26/+80)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1780171 =	38 (0.510)					intergenic (+88/+18)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	= 1780127	36 (0.410)	11 (0.150)	9/210	NT	24.3%	intergenic (+44/+62)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	= 1780151	38 (0.510)					intergenic (+68/+38)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	1788657 =	78 (0.880)	6 (0.070)	6/238	NT	7.4%	coding (88/756 nt)	uppS	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
	?	NC_002947	1788690 =	76 (0.900)					coding (121/756 nt)	uppS	(2E,6E)‑farnesyl‑diphosphate specific ditrans,polycis‑undecaprenyl‑diphosphate synthase
*	?	NC_002947	1798193 =	84 (0.950)	5 (0.060)	5/244	NT	5.8%	coding (74/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798250 =	80 (0.920)					coding (131/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	= 1799915	79 (0.900)	11 (0.150)	5/202	NT	13.6%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	76 (1.060)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	1842839 =	93 (1.050)	8 (0.100)	8/230	NT	8.6%	coding (1997/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	1842873 =	84 (1.030)					coding (1963/2754 nt)	gacS	sensor protein GacS
*	?	NC_002947	1844176 =	1 (0.010)	87 (1.030)	73/238	NT	69.3%	coding (660/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 2179419	76 (0.900)					intergenic (+175/+93)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1844179	1 (0.010)	79 (0.930)	66/240	NT	62.7%	coding (657/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	2177745 =	93 (1.090)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
*	?	NC_002947	1886437 =	94 (1.070)	7 (0.080)	7/236	NT	7.4%	coding (1062/1488 nt)	rmuC	DNA recombination limiting inversions protein
	?	NC_002947	1886464 =	86 (1.020)					coding (1089/1488 nt)	rmuC	DNA recombination limiting inversions protein
*	?	NC_002947	= 1892556	93 (1.050)	6 (0.070)	6/248	NT	6.1%	intergenic (+24/‑71)	PP_1697/PP_1698	transcriptional regulator, GntR family/MFS transporter
	?	NC_002947	= 1892582	92 (1.040)					intergenic (+50/‑45)	PP_1697/PP_1698	transcriptional regulator, GntR family/MFS transporter
*	?	NC_002947	1896710 =	94 (1.070)	6 (0.070)	6/242	NT	6.4%	coding (1902/1986 nt)	PP_1700	acyltransferase
	?	NC_002947	1896746 =	85 (0.990)					coding (1938/1986 nt)	PP_1700	acyltransferase
*	?	NC_002947	1899249 =	87 (0.990)	10 (0.120)	7/228	NT	10.1%	intergenic (+277/‑243)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899331 =	99 (1.220)					intergenic (+359/‑161)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	= 1899258	85 (0.960)	6 (0.070)	6/228	NT	6.3%	intergenic (+286/‑234)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899320	99 (1.220)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1906724 =	81 (0.920)	6 (0.090)	6/196	NT	10.2%	intergenic (+22/+106)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1906818 =	42 (0.600)					intergenic (+116/+12)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	1927911 =	72 (0.820)	4 (0.050)	4/234	NT	5.8%	coding (677/714 nt)	PP_1727	GntR family transcriptional regulator
	?	NC_002947	1927937 =	63 (0.760)					coding (703/714 nt)	PP_1727	GntR family transcriptional regulator
*	?	NC_002947	= 1947843	75 (0.850)	5 (0.070)	5/196	NT	7.1%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	= 1947910	71 (1.020)					intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	1967188 =	21 (0.240)	5 (0.080)	5/182	NT	18.7%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	28 (0.430)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	15 (0.170)	14 (0.220)	12/182	NT	41.8%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	28 (0.430)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	1970763 =	63 (0.710)	12 (0.160)	9/208	NT	16.5%	intergenic (+14/‑252)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	1970865 =	69 (0.930)					intergenic (+116/‑150)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	= 1970782	63 (0.710)	12 (0.160)	10/208	NT	16.5%	intergenic (+33/‑233)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	= 1970844	69 (0.930)					intergenic (+95/‑171)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	2033772 =	12 (0.140)	8 (0.090)	8/238	NT	34.4%	coding (1210/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
	?	NC_002947	2033794 =	19 (0.220)					coding (1232/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
*	?	NC_002947	= 2048853	77 (0.870)	6 (0.080)	6/214	NT	8.5%	intergenic (+49/+90)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	= 2048910	63 (0.830)					intergenic (+106/+33)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	2050602 =	31 (0.350)	6 (0.100)	6/174	NT	21.9%	intergenic (‑52/+123)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	2050712 =	21 (0.340)					intergenic (‑162/+13)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2050638	26 (0.290)	9 (0.150)	6/174	NT	31.5%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	21 (0.340)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2056021	74 (0.840)	6 (0.080)	6/216	NT	7.4%	intergenic (+27/‑116)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	= 2056095	86 (1.120)					intergenic (+101/‑42)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	= 2057866	85 (0.960)	5 (0.070)	5/200	NT	6.2%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2057906	84 (1.180)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2063227	63 (0.710)	12 (0.170)	10/198	NT	20.1%	intergenic (+41/‑166)	PP_1838/PP_1839	membrane protein/hypothetical protein
	?	NC_002947	= 2063271	45 (0.640)					intergenic (+85/‑122)	PP_1838/PP_1839	membrane protein/hypothetical protein
*	?	NC_002947	= 2071201	83 (0.940)	6 (0.070)	6/234	NT	7.5%	intergenic (+110/+117)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
	?	NC_002947	= 2071284	70 (0.840)					intergenic (+193/+34)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
*	?	NC_002947	2078275 =	65 (0.740)	8 (0.100)	3/234	NT	10.3%	intergenic (+17/+98)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	2078372 =	78 (0.940)					intergenic (+114/+1)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	2099990 =	98 (1.110)	7 (0.080)	6/248	NT	7.7%	intergenic (‑58/‑147)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100111 =	69 (0.780)					intergenic (‑179/‑26)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2145840	125 (1.420)	11 (0.130)	7/234	NT	8.0%	coding (151/465 nt)	etp	phosphotyrosine‑protein phosphatase
	?	NC_002947	= 2145863	134 (1.610)					coding (174/465 nt)	etp	phosphotyrosine‑protein phosphatase
*	?	NC_002947	= 2226811	41 (0.460)	5 (0.060)	5/240	NT	10.6%	coding (634/804 nt)	PP_1964	dGMP/dTMP/dhydroxyCMP kinase
	?	NC_002947	= 2226824	45 (0.530)					coding (621/804 nt)	PP_1964	dGMP/dTMP/dhydroxyCMP kinase
*	?	NC_002947	= 2236977	96 (1.090)	7 (0.080) +AT	6/244	NT	7.6%	intergenic (+29/+99)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
	?	NC_002947	= 2301608	78 (0.880)					intergenic (‑209/‑122)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	2270836 =	67 (0.760)	5 (0.060)	4/228	NT	7.7%	coding (388/774 nt)	PP_2002	oxidoreductase
	?	NC_002947	2270867 =	58 (0.720)					coding (419/774 nt)	PP_2002	oxidoreductase
*	?	NC_002947	= 2271256	51 (0.580)	6 (0.080)	5/216	NT	10.6%	intergenic (+34/‑186)	PP_2002/PP_t31	oxidoreductase/tRNA‑Val
	?	NC_002947	= 2271306	57 (0.740)					intergenic (+84/‑136)	PP_2002/PP_t31	oxidoreductase/tRNA‑Val
*	?	NC_002947	2295818 =	91 (1.030)	7 (0.100)	6/200	NT	8.6%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	76 (1.070)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2301552	65 (0.740)	4 (0.050)	3/220	NT	5.8%	intergenic (‑153/‑178)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	= 2301609	73 (0.930)					intergenic (‑210/‑121)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	2334324 =	80 (0.910)	5 (0.060)	5/242	NT	6.0%	intergenic (+28/+52)	fadA/PP_2052	3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
	?	NC_002947	2334370 =	78 (0.910)					intergenic (+74/+6)	fadA/PP_2052	3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
*	?	NC_002947	2434120 =	83 (0.940)	5 (0.060)	5/222	NT	5.8%	intergenic (+20/+88)	uup/PP_2132	ABC transporter ATP‑binding protein/universal stress protein
	?	NC_002947	2434194 =	88 (1.120)					intergenic (+94/+14)	uup/PP_2132	ABC transporter ATP‑binding protein/universal stress protein
*	?	NC_002947	= 2456087	105 (1.190)	6 (0.070)	6/240	NT	5.7%	coding (759/1464 nt)	gapB	glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 2456111	96 (1.120)					coding (783/1464 nt)	gapB	glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	= 2456902	81 (0.920)	7 (0.100)	8/196	NT	8.4%	intergenic (+110/‑71)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
	?	NC_002947	= 2456914	89 (1.280)					intergenic (+122/‑59)	gapB/PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
*	?	NC_002947	= 2464309	84 (0.950)	8 (0.100)	8/230	NT	9.2%	intergenic (+21/+19)	lolE/PP_2157	lipoprotein releasing system permease/sensor histidine kinase
	?	NC_002947	= 2464319	81 (0.990)					intergenic (+31/+9)	lolE/PP_2157	lipoprotein releasing system permease/sensor histidine kinase
*	?	NC_002947	2530824 =	32 (0.360)	5 (0.060)	3/244	NT	13.7%	coding (20/369 nt)	PP_2219	hypothetical protein
	?	NC_002947	= 4908127	NA (NA)					intergenic (‑58/‑224)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	2562704 =	81 (0.920)	4 (0.050)	4/236	NT	5.0%	coding (399/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	2562731 =	74 (0.880)					coding (426/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
*	?	NC_002947	= 2635482	72 (0.820)	4 (0.050)	6/224	NT	5.3%	intergenic (+29/+88)	PP_2304/PP_2305	peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein
	?	NC_002947	= 2635487	79 (0.990)					intergenic (+34/+83)	PP_2304/PP_2305	peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein
*	?	NC_002947	2664051 =	49 (0.560)	6 (0.080)	5/200	NT	13.9%	intergenic (+33/‑130)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	2664132 =	35 (0.490)					intergenic (+114/‑49)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
*	?	NC_002947	= 2664074	48 (0.540)	3 (0.040)	3/200	NT	7.5%	intergenic (+56/‑107)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	= 2664107	35 (0.490)					intergenic (+89/‑74)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
*	?	NC_002947	2798676 =	74 (0.840)	7 (0.080)	6/232	NT	9.3%	coding (105/693 nt)	endX	extracellular DNA endonuclease
	?	NC_002947	2798707 =	68 (0.820)					coding (74/693 nt)	endX	extracellular DNA endonuclease
*	?	NC_002947	= 2809530	101 (1.140)	6 (0.070)	6/238	NT	5.6%	intergenic (‑232/‑107)	PP_5525/thrS	hypothetical protein/threonine‑‑tRNA ligase
	?	NC_002947	= 2809537	106 (1.250)					intergenic (‑239/‑100)	PP_5525/thrS	hypothetical protein/threonine‑‑tRNA ligase
*	?	NC_002947	2864030 =	79 (0.900)	4 (0.050)	4/228	NT	5.2%	coding (1047/1194 nt)	gllR	HTH‑type transcriptional regulator GalR
	?	NC_002947	2864064 =	74 (0.910)					coding (1081/1194 nt)	gllR	HTH‑type transcriptional regulator GalR
*	?	NC_002947	2938989 =	NA (NA)	6 (0.070)	7/234	NT	NA	coding (109/1329 nt)	PP_2570	transposase
	?	NC_002947	2939018 =	NA (NA)					coding (80/1329 nt)	PP_2570	transposase
*	?	NC_002947	= 2954698	59 (0.670)	5 (0.070)	5/200	NT	9.2%	intergenic (‑158/‑123)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
	?	NC_002947	= 2954716	51 (0.720)					intergenic (‑176/‑105)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
*	?	NC_002947	= 3045915	104 (1.180)	8 (0.090)	6/244	NT	7.8%	coding (449/894 nt)	pstA	phosphate ABC transporter permease
	?	NC_002947	= 3045948	88 (1.010)					coding (482/894 nt)	pstA	phosphate ABC transporter permease
*	?	NC_002947	3078370 =	109 (1.240)	6 (0.070)	6/238	NT	5.3%	coding (939/1410 nt)	PP_2688	hypothetical protein
	?	NC_002947	3078398 =	109 (1.290)					coding (911/1410 nt)	PP_2688	hypothetical protein
*	?	NC_002947	3117766 =	89 (1.010)	6 (0.070)	6/238	NT	6.9%	coding (859/1188 nt)	cfa	cyclopropane‑fatty‑acyl‑phospholipid synthase
	?	NC_002947	3117801 =	76 (0.900)					coding (824/1188 nt)	cfa	cyclopropane‑fatty‑acyl‑phospholipid synthase
*	?	NC_002947	3359296 =	87 (0.990)	8 (0.100)	7/226	NT	9.8%	coding (430/912 nt)	PP_2955	CorA family magnesium/cobalt transporter
	?	NC_002947	3359328 =	68 (0.850)					coding (398/912 nt)	PP_2955	CorA family magnesium/cobalt transporter
*	?	NC_002947	3366596 =	92 (1.040)	25 (0.290)	23/244	NT	25.6%	intergenic (+219/‑142)	PP_2962/PP_2964	alcohol dehydrogenase/transposase
	?	NC_002947	4970500 =	55 (0.630)					intergenic (‑213/+181)	fliC/PP_4379	flagellin/3‑oxoacyl‑ACP synthase
*	?	NC_002947	= 3383608	72 (0.820)	8 (0.090)	8/248	NT	11.2%	coding (501/546 nt)	PP_2985	hypothetical protein
	?	NC_002947	= 4970504	55 (0.620)					intergenic (‑217/+177)	fliC/PP_4379	flagellin/3‑oxoacyl‑ACP synthase
*	?	NC_002947	= 3523465	NA (NA)	9 (0.110)	6/236	NT	NA	coding (135/1533 nt)	PP_3114	transposase
	?	NC_002947	= 3523493	NA (NA)					coding (163/1533 nt)	PP_3114	transposase
*	?	NC_002947	= 3523858	NA (NA)	7 (0.090)	9/224	NT	NA	coding (528/1533 nt)	PP_3114	transposase
	?	NC_002947	= 3523866	NA (NA)					coding (536/1533 nt)	PP_3114	transposase
*	?	NC_002947	3538251 =	75 (0.850)	4 (0.050)	4/232	NT	6.0%	coding (30/1116 nt)	PP_5587	hypothetical protein
	?	NC_002947	3538275 =	56 (0.680)					coding (54/1116 nt)	PP_5587	hypothetical protein
*	?	NC_002947	3588140 =	95 (1.080)	6 (0.080)	6/208	NT	8.4%	intergenic (+18/‑57)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	3588208 =	52 (0.700)					coding (12/1272 nt)	benE‑II	benzoate transport protein
*	?	NC_002947	= 3673438	97 (1.100)	6 (0.070)	6/238	NT	5.7%	coding (443/891 nt)	PP_3237	universal stress protein family protein
	?	NC_002947	= 3673474	104 (1.230)					coding (479/891 nt)	PP_3237	universal stress protein family protein
*	?	NC_002947	= 3676073	68 (0.770)	6 (0.080)	6/220	NT	8.8%	intergenic (+37/+55)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
	?	NC_002947	= 3676096	64 (0.820)					intergenic (+60/+32)	PP_3240/PP_5592	hypothetical protein/hypothetical protein
*	?	NC_002947	= 3696856	112 (1.270)	6 (0.070)	6/240	NT	5.3%	coding (58/225 nt)	PP_3262	metallothionein
	?	NC_002947	= 3696886	104 (1.220)					coding (88/225 nt)	PP_3262	metallothionein
*	?	NC_002947	= 3708303	128 (1.450)	11 (0.130)	10/232	NT	8.4%	coding (614/1563 nt)	actP‑III	acetate permease
	?	NC_002947	= 3708336	119 (1.440)					coding (581/1563 nt)	actP‑III	acetate permease
*	?	NC_002947	= 3794018	82 (0.930)	5 (0.060)	5/232	NT	6.0%	coding (548/1191 nt)	PP_3355	beta‑ketothiolase
	?	NC_002947	= 3794026	81 (0.980)					coding (540/1191 nt)	PP_3355	beta‑ketothiolase
*	?	NC_002947	= 3813252	70 (0.790)	6 (0.070)	6/234	NT	8.1%	coding (286/852 nt)	PP_3369	LysR family transcriptional regulator
	?	NC_002947	= 3813257	71 (0.850)					coding (291/852 nt)	PP_3369	LysR family transcriptional regulator
*	?	NC_002947	3917240 =	76 (0.860)	6 (0.070)	5/232	NT	8.0%	coding (978/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	3917268 =	67 (0.810)					coding (1006/3129 nt)	mexB	multidrug resistance protein MexB
*	?	NC_002947	= 3919334	69 (0.780)	7 (0.090)	6/230	NT	10.1%	coding (3072/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	= 3919346	61 (0.750)					coding (3084/3129 nt)	mexB	multidrug resistance protein MexB
*	?	NC_002947	= 3928414	95 (1.080)	11 (0.140)	8/220	NT	11.0%	intergenic (+46/‑94)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
	?	NC_002947	= 3928431	94 (1.200)					intergenic (+63/‑77)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
*	?	NC_002947	3947957 =	64 (0.730)	6 (0.090)	5/192	NT	13.6%	coding (136/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	3948042 =	27 (0.400)					coding (51/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	3968919 =	27 (0.310)	10 (0.120)	8/240	NT	14.9%	coding (1003/1179 nt)	PP_3498	transposase
	?	NC_002947	3969010 =	88 (1.030)					coding (1094/1179 nt)	PP_3498	transposase
*	?	NC_002947	4074203 =	NA (NA)	8 (0.090)	5/238	NT	58.2%	coding (1256/1329 nt)	PP_3586	transposase
	?	NC_002947	5545215 =	6 (0.070)					intergenic (‑307/+570)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	4075662 =	4 (0.050)	12 (0.220) +48 bp	10/152	NT	37.4%	intergenic (‑204/+237)	PP_3586/tpx	transposase/2‑Cys peroxiredoxin
	?	NC_002947	5545674 =	62 (0.700)					intergenic (‑766/+111)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	= 4094693	82 (0.930)	11 (0.140)	8/224	NT	12.3%	intergenic (+65/+70)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	= 4094738	83 (1.040)					intergenic (+110/+25)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
*	?	NC_002947	= 4121729	70 (0.790)	4 (0.050)	4/238	NT	5.4%	coding (102/789 nt)	PP_3624	hypothetical protein
	?	NC_002947	= 4121744	74 (0.870)					coding (87/789 nt)	PP_3624	hypothetical protein
*	?	NC_002947	4143231 =	75 (0.850)	4 (0.050)	4/236	NT	5.5%	coding (1320/1482 nt)	PP_3646	aldehyde dehydrogenase family protein
	?	NC_002947	4143269 =	67 (0.800)					coding (1358/1482 nt)	PP_3646	aldehyde dehydrogenase family protein
*	?	NC_002947	= 4150085	89 (1.010)	13 (0.170)	11/212	NT	14.2%	intergenic (+40/‑357)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4150116	81 (1.080)					intergenic (+71/‑326)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	4159113 =	93 (1.050)	13 (0.160)	10/222	NT	14.5%	intergenic (+17/‑192)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159201 =	70 (0.890)					intergenic (+105/‑104)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	4186980 =	59 (0.670)	4 (0.050)	3/234	NT	6.9%	coding (283/1242 nt)	PP_3683	hypothetical protein
	?	NC_002947	4187004 =	52 (0.620)					coding (307/1242 nt)	PP_3683	hypothetical protein
*	?	NC_002947	4233485 =	96 (1.090)	6 (0.070)	5/232	NT	6.6%	intergenic (+118/+112)	PP_5626/PP_3711	repressor‑like DNA‑binding domain‑containing protein/diguanylate cyclase
	?	NC_002947	4233506 =	80 (0.970)					intergenic (+139/+91)	PP_5626/PP_3711	repressor‑like DNA‑binding domain‑containing protein/diguanylate cyclase
*	?	NC_002947	4282145 =	106 (1.200)	7 (0.090)	7/224	NT	7.0%	intergenic (‑678/+40)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
	?	NC_002947	4282184 =	90 (1.130)					intergenic (‑717/+1)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
*	?	NC_002947	4340085 =	38 (0.430)	12 (0.190)	8/180	NT	42.5%	intergenic (+26/‑305)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	4340169 =	5 (0.080)					intergenic (+110/‑221)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
*	?	NC_002947	= 4420534	93 (1.050)	6 (0.070)	4/226	NT	7.1%	coding (240/1662 nt)	PP_3912	DNA‑cytosine methyltransferase
	?	NC_002947	= 4420552	73 (0.910)					coding (258/1662 nt)	PP_3912	DNA‑cytosine methyltransferase
*	?	NC_002947	= 4458811	59 (0.670)	4 (0.050)	4/238	NT	7.1%	intergenic (+59/‑209)	pcaJ/trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
	?	NC_002947	= 4458834	48 (0.570)					intergenic (+82/‑186)	pcaJ/trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
*	?	NC_002947	= 4491957	65 (0.740)	7 (0.080)	6/234	NT	10.3%	intergenic (‑50/‑205)	PP_3982/PP_3983	hypothetical protein/hypothetical protein
	?	NC_002947	= 4491968	61 (0.730)					intergenic (‑61/‑194)	PP_3982/PP_3983	hypothetical protein/hypothetical protein
*	?	NC_002947	4523155 =	73 (0.830)	6 (0.070)	5/238	NT	7.7%	coding (960/2226 nt)	idh	isocitrate dehydrogenase
	?	NC_002947	4523187 =	74 (0.870)					coding (992/2226 nt)	idh	isocitrate dehydrogenase
*	?	NC_002947	4524527 =	88 (1.000)	10 (0.130)	6/222	NT	11.8%	intergenic (+106/‑87)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
	?	NC_002947	4524569 =	71 (0.900)					intergenic (+148/‑45)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
*	?	NC_002947	= 4533623	115 (1.300)	9 (0.110)	7/224	NT	7.9%	intergenic (+21/‑153)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	= 4533688	107 (1.340)					intergenic (+86/‑88)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
*	?	NC_002947	4577844 =	107 (1.210)	18 (0.210)	16/238	NT	16.5%	intergenic (+9/+100)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	4577929 =	80 (0.950)					intergenic (+94/+15)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	= 4583073	93 (1.050)	8 (0.100)	8/234	NT	8.2%	coding (399/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase
	?	NC_002947	= 4583096	92 (1.110)					coding (376/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase
*	?	NC_002947	4586063 =	7 (0.080)	10 (0.160)	8/172	NT	51.5%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586167 =	14 (0.230)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4586100	7 (0.080)	10 (0.160)	10/172	NT	51.5%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	14 (0.230)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4641793	75 (0.850)	4 (0.050)	4/236	NT	5.1%	coding (56/1383 nt)	gabP‑IV	gamma‑aminobutyrate permease
	?	NC_002947	= 4641798	76 (0.910)					coding (51/1383 nt)	gabP‑IV	gamma‑aminobutyrate permease
*	?	NC_002947	4647603 =	16 (0.180)	6 (0.100)	5/170	NT	41.5%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	6 (0.100)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4647641	10 (0.110)	8 (0.130)	7/170	NT	55.5%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	6 (0.100)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4668931	92 (1.040)	7 (0.080)	6/238	NT	7.0%	coding (757/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
	?	NC_002947	= 4668953	97 (1.150)					coding (779/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
*	?	NC_002947	4700790 =	75 (0.850)	5 (0.060)	3/220	NT	6.1%	intergenic (‑57/+93)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	4700862 =	87 (1.110)					intergenic (‑129/+21)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	= 4700803	73 (0.830)	10 (0.130)	7/220	NT	11.6%	intergenic (‑70/+80)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	= 4700847	87 (1.110)					intergenic (‑114/+36)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	4755172 =	102 (1.160)	5 (0.060)	5/230	NT	5.1%	coding (368/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	4755215 =	91 (1.110)					coding (411/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	4793607 =	105 (1.190)	6 (0.070)	6/232	NT	5.8%	coding (278/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	4793634 =	95 (1.150)					coding (251/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	4808219 =	0 (0.000)	38 (0.600)	24/178	NT	57.6%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	56 (0.890)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4824647 =	116 (1.310)	6 (0.070)	6/246	NT	5.1%	coding (6588/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4824676 =	106 (1.210)					coding (6559/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4849026 =	99 (1.120)	5 (0.060)	4/238	NT	5.1%	coding (281/1383 nt)	hemN	oxygen‑independent coproporphyrinogen III dehydrogenase
	?	NC_002947	4849051 =	90 (1.060)					coding (306/1383 nt)	hemN	oxygen‑independent coproporphyrinogen III dehydrogenase
*	?	NC_002947	4860170 =	112 (1.270)	6 (0.070)	6/248	NT	5.5%	coding (925/2331 nt)	ligA	DNA ligase
	?	NC_002947	4860218 =	94 (1.070)					coding (877/2331 nt)	ligA	DNA ligase
*	?	NC_002947	= 4861197	89 (1.010)	16 (0.230)	10/198	NT	15.8%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	99 (1.410)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	4870706 =	93 (1.050)	5 (0.060)	5/240	NT	5.1%	intergenic (+11/‑109)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	4870786 =	95 (1.110)					intergenic (+91/‑29)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
*	?	NC_002947	= 4876493	125 (1.420)	9 (0.110)	6/222	NT	6.8%	intergenic (+286/+151)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
	?	NC_002947	= 4876523	136 (1.720)					intergenic (+316/+121)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
*	?	NC_002947	4886181 =	58 (0.660)	7 (0.100)	6/190	NT	17.2%	intergenic (+15/+108)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	4886268 =	23 (0.340)					intergenic (+102/+21)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 4890813	67 (0.760)	7 (0.090)	7/230	NT	10.3%	intergenic (+168/‑71)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
	?	NC_002947	= 4890835	60 (0.730)					intergenic (+190/‑49)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
*	?	NC_002947	4896423 =	51 (0.580)	3 (0.040)	3/206	NT	6.0%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4896512 =	51 (0.700)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4896443	49 (0.560)	26 (0.360)	17/206	NT	36.2%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4896490	51 (0.700)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4917840	103 (1.170)	7 (0.080)	6/240	NT	6.5%	coding (194/1557 nt)	PP_4328	hypothetical protein
	?	NC_002947	= 4917851	101 (1.180)					coding (205/1557 nt)	PP_4328	hypothetical protein
*	?	NC_002947	4925022 =	84 (0.950)	17 (0.200)	12/242	NT	17.2%	coding (73/855 nt)	PP_4334	ParA family protein
	?	NC_002947	= 5545714	NA (NA)					intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	= 4925023	84 (0.950)	12 (0.140)	11/244	NT	12.7%	coding (72/855 nt)	PP_4334	ParA family protein
	?	NC_002947	5222630 =	NA (NA)					coding (8/840 nt)	PP_4602	AraC family transcriptional regulator
*	?	NC_002947	4950395 =	69 (0.780)	34 (0.410)	31/234	NT	34.3%	intergenic (‑7/+3)	fliM/fliL	flagellar biosynthesis switching/energizing protein/flagellar protein FliL
	?	NC_002947	= 5224672	NA (NA)					intergenic (‑328/+51)	PP_4603/PP_4604	transposase/DMT superfamily permease
*	?	NC_002947	= 4950397	67 (0.760)	19 (0.220)	17/242	NT	22.5%	intergenic (‑9/+1)	fliM/fliL	flagellar biosynthesis switching/energizing protein/flagellar protein FliL
	?	NC_002947	5222979 =	NA (NA)					intergenic (‑342/+37)	PP_4602/PP_4603	AraC family transcriptional regulator/transposase
*	?	NC_002947	4957603 =	115 (1.300)	5 (0.060)	5/218	NT	5.2%	intergenic (‑41/+122)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
	?	NC_002947	4957693 =	83 (1.070)					intergenic (‑131/+32)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
*	?	NC_002947	5048151 =	81 (0.920)	6 (0.070)	6/238	NT	7.6%	intergenic (‑173/+170)	PP_5685/PP_4451	hypothetical protein/hypothetical protein
	?	NC_002947	5048180 =	68 (0.800)					intergenic (‑202/+141)	PP_5685/PP_4451	hypothetical protein/hypothetical protein
*	?	NC_002947	5077327 =	107 (1.210)	7 (0.080)	6/236	NT	6.8%	intergenic (+74/+34)	PP_4470/mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
	?	NC_002947	5077353 =	89 (1.060)					intergenic (+100/+8)	PP_4470/mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
*	?	NC_002947	5097307 =	72 (0.820)	4 (0.050)	4/236	NT	5.4%	intergenic (+250/+42)	PP_mr66/acsA‑I	P6/acetyl‑CoA synthetase
	?	NC_002947	5097321 =	73 (0.870)					intergenic (+264/+28)	PP_mr66/acsA‑I	P6/acetyl‑CoA synthetase
*	?	NC_002947	= 5159824	49 (0.560)	9 (0.140)	7/186	NT	17.4%	intergenic (+39/+67)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
	?	NC_002947	= 5159839	49 (0.740)					intergenic (+54/+52)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
*	?	NC_002947	5162618 =	27 (0.310)	12 (0.170)	10/196	NT	33.2%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	27 (0.390)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5162643	30 (0.340)	10 (0.140)	8/196	NT	28.3%	intergenic (+118/+83)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	= 5162675	27 (0.390)					intergenic (+150/+51)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5164503	102 (1.160)	5 (0.060)	5/232	NT	5.1%	coding (3425/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164514	91 (1.100)					coding (3414/3906 nt)	hrpA	ATP‑dependent helicase HrpA
*	?	NC_002947	= 5164675	112 (1.270)	6 (0.070)	6/240	NT	5.4%	coding (3253/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164699	100 (1.170)					coding (3229/3906 nt)	hrpA	ATP‑dependent helicase HrpA
*	?	NC_002947	= 5196440	113 (1.280)	10 (0.120)	7/228	NT	8.9%	coding (123/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196465	102 (1.260)					coding (98/690 nt)	ybgJ	allophanate hydrolase subunit 1
*	?	NC_002947	5201627 =	16 (0.180)	21 (0.340)	16/174	NT	62.5%	intergenic (‑65/‑115)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201722 =	14 (0.230)					intergenic (‑160/‑20)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5201663	15 (0.170)	9 (0.150)	9/174	NT	42.4%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	14 (0.230)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5235127	69 (0.780)	5 (0.060)	5/236	NT	7.3%	coding (413/2325 nt)	fecA	outer membrane ferric citrate porin
	?	NC_002947	= 5235139	62 (0.740)					coding (425/2325 nt)	fecA	outer membrane ferric citrate porin
*	?	NC_002947	= 5238691	91 (1.030)	7 (0.080)	6/242	NT	7.3%	coding (155/204 nt)	PP_5701	hypothetical protein
	?	NC_002947	= 5238792	88 (1.020)					intergenic (+52/‑229)	PP_5701/PP_4616	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5342644	69 (0.780)	5 (0.060)	5/228	NT	6.9%	intergenic (+42/‑165)	panC/pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
	?	NC_002947	= 5342666	72 (0.890)					intergenic (+64/‑143)	panC/pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
*	?	NC_002947	5350520 =	76 (0.860)	8 (0.090)	5/240	NT	9.2%	intergenic (+9/+73)	PP_4704/PP_4705	hypothetical protein/glyoxalase
	?	NC_002947	5350571 =	84 (0.980)					intergenic (+60/+22)	PP_4704/PP_4705	hypothetical protein/glyoxalase
*	?	NC_002947	5382446 =	18 (0.200)	4 (0.060)	3/178	NT	27.7%	intergenic (+18/+115)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	5382544 =	8 (0.130)					intergenic (+116/+17)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	= 5382480	14 (0.160)	10 (0.160)	10/178	NT	52.6%	intergenic (+52/+81)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	= 5382508	8 (0.130)					intergenic (+80/+53)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	5430445 =	142 (1.610)	8 (0.090)	7/238	NT	5.8%	intergenic (‑79/+82)	PP_4769/PP_4770	hypothetical protein/hypothetical protein
	?	NC_002947	5430481 =	125 (1.480)					intergenic (‑115/+46)	PP_4769/PP_4770	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5432804	54 (0.610)	4 (0.050)	4/238	NT	6.6%	coding (2508/2529 nt)	hrpB	ATP‑dependent helicase HrpB
	?	NC_002947	= 5432818	61 (0.720)					coding (2494/2529 nt)	hrpB	ATP‑dependent helicase HrpB
*	?	NC_002947	5477138 =	5 (0.060)	9 (0.150)	8/166	NT	57.4%	intergenic (+3/+109)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	5477237 =	10 (0.170)					intergenic (+102/+10)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	= 5477178	3 (0.030)	13 (0.220)	8/166	NT	68.4%	intergenic (+43/+69)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	= 5477195	10 (0.170)					intergenic (+60/+52)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	= 5485197	64 (0.730)	5 (0.070)	4/196	NT	7.5%	intergenic (+55/‑92)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
	?	NC_002947	= 5485219	72 (1.030)					intergenic (+77/‑70)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
*	?	NC_002947	5506609 =	91 (1.030)	12 (0.180)	11/190	NT	19.6%	intergenic (+20/‑179)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	5506680 =	29 (0.430)					intergenic (+91/‑108)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
*	?	NC_002947	= 5513315	87 (0.990)	7 (0.100)	5/196	NT	8.3%	intergenic (+45/‑109)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	= 5513371	87 (1.250)					intergenic (+101/‑53)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	= 5518359	72 (0.820)	4 (0.050)	4/232	NT	5.3%	coding (270/1068 nt)	PP_4850	membrane protein
	?	NC_002947	= 5518430	77 (0.930)					coding (199/1068 nt)	PP_4850	membrane protein
*	?	NC_002947	= 5537105	72 (0.820)	16 (0.230)	11/194	NT	19.5%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	76 (1.100)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	5538592 =	76 (0.860)	5 (0.070)	4/206	NT	7.8%	intergenic (+34/+87)	PP_4871/PP_4872	lysine decarboxylase family protein/hypothetical protein
	?	NC_002947	5538647 =	55 (0.750)					intergenic (+89/+32)	PP_4871/PP_4872	lysine decarboxylase family protein/hypothetical protein
*	?	NC_002947	= 5552384	106 (1.200)	7 (0.080)	7/234	NT	6.8%	coding (1565/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	= 5552417	91 (1.090)					intergenic (+32/+629)	PP_4882/PP_5717	iron ABC transporter permease/hypothetical protein
*	?	NC_002947	5571458 =	106 (1.200)	5 (0.060)	4/220	NT	5.6%	intergenic (+29/+112)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
	?	NC_002947	5571543 =	74 (0.950)					intergenic (+114/+27)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
*	?	NC_002947	= 5594170	55 (0.620)	7 (0.100)	6/192	NT	11.6%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5594207	64 (0.940)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5639085	75 (0.850)	4 (0.050)	3/238	NT	5.1%	coding (126/1320 nt)	PP_4950	hypothetical protein
	?	NC_002947	= 5639112	77 (0.910)					coding (153/1320 nt)	PP_4950	hypothetical protein
*	?	NC_002947	= 5653009	76 (0.860)	12 (0.160)	12/206	NT	14.4%	intergenic (‑59/+102)	PP_4961/PP_4962	lipoprotein/hypothetical protein
	?	NC_002947	= 5653023	80 (1.090)					intergenic (‑73/+88)	PP_4961/PP_4962	lipoprotein/hypothetical protein
*	?	NC_002947	5671666 =	39 (0.440)	4 (0.060)	4/200	NT	10.3%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671751 =	38 (0.540)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5671689	32 (0.360)	7 (0.100)	5/200	NT	18.0%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	= 5671726	38 (0.540)					intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5679875	88 (1.000)	8 (0.100)	8/216	NT	10.0%	intergenic (+42/‑122)	bioA/rsmE	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
	?	NC_002947	= 5679947	68 (0.890)					intergenic (+114/‑50)	bioA/rsmE	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
*	?	NC_002947	5696617 =	69 (0.780)	6 (0.070)	3/234	NT	10.9%	intergenic (+13/‑199)	pyrC'/hslV	dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit
	?	NC_002947	5696692 =	33 (0.400)					intergenic (+88/‑124)	pyrC'/hslV	dihydroorotase‑like protein/ATP‑dependent HslVU protease peptidase subunit
*	?	NC_002947	5698783 =	65 (0.740)	9 (0.120)	9/214	NT	13.8%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698866 =	56 (0.740)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	= 5698799	65 (0.740)	9 (0.120)	8/214	NT	13.8%	intergenic (+33/‑134)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	= 5698848	56 (0.740)					intergenic (+82/‑85)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	5724316 =	53 (0.600)	16 (0.230)	12/200	NT	26.7%	intergenic (‑162/+132)	PP_5024/opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
	?	NC_002947	5724383 =	45 (0.630)					intergenic (‑229/+65)	PP_5024/opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
*	?	NC_002947	= 5724339	40 (0.450)	7 (0.100)	6/200	NT	15.4%	intergenic (‑185/+109)	PP_5024/opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
	?	NC_002947	= 5724358	45 (0.630)					intergenic (‑204/+90)	PP_5024/opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
*	?	NC_002947	5731921 =	98 (1.110)	9 (0.110)	7/234	NT	8.9%	coding (691/1206 nt)	hutI	imidazolonepropionase
	?	NC_002947	5731965 =	91 (1.090)					coding (647/1206 nt)	hutI	imidazolonepropionase
*	?	NC_002947	5743369 =	102 (1.160)	8 (0.090)	7/242	NT	6.9%	intergenic (‑146/+101)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743469 =	115 (1.340)					intergenic (‑246/+1)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	= 5743404	121 (1.370)	14 (0.180)	9/222	NT	11.1%	intergenic (‑181/+66)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	= 5743432	116 (1.470)					intergenic (‑209/+38)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	5759460 =	51 (0.580)	10 (0.150)	9/184	NT	24.8%	intergenic (+13/+143)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	5759552 =	23 (0.350)					intergenic (+105/+51)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	5762590 =	72 (0.820)	5 (0.060)	5/234	NT	7.0%	intergenic (+50/‑91)	gpmI/PP_5057	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase
	?	NC_002947	5762622 =	65 (0.780)					intergenic (+82/‑59)	gpmI/PP_5057	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase
*	?	NC_002947	= 5765441	106 (1.200)	11 (0.130)	6/234	NT	9.7%	coding (41/768 nt)	PP_5059	hypothetical protein
	?	NC_002947	= 5765457	105 (1.260)					coding (57/768 nt)	PP_5059	hypothetical protein
*	?	NC_002947	5773906 =	81 (0.920)	4 (0.050)	4/232	NT	5.1%	coding (413/657 nt)	betI	choline‑responsive transcriptional repressor BetI
	?	NC_002947	5773970 =	74 (0.900)					coding (477/657 nt)	betI	choline‑responsive transcriptional repressor BetI
*	?	NC_002947	5786528 =	76 (0.860)	8 (0.110)	7/200	NT	13.1%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5786613 =	45 (0.630)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5816910 =	55 (0.620)	9 (0.120)	8/212	NT	14.4%	intergenic (+40/+89)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5816973 =	60 (0.800)					intergenic (+103/+26)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5816927	53 (0.600)	12 (0.160)	8/212	NT	18.6%	intergenic (+57/+72)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5816954	60 (0.800)					intergenic (+84/+45)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5818146	98 (1.110)	5 (0.060)	5/232	NT	5.2%	coding (84/687 nt)	PP_5094	PLP binding domain‑containing protein
	?	NC_002947	= 5818154	89 (1.080)					coding (92/687 nt)	PP_5094	PLP binding domain‑containing protein
*	?	NC_002947	5820226 =	127 (1.440)	6 (0.070)	6/246	NT	5.0%	intergenic (+19/‑81)	PP_5096/metX	shape determination factor/homoserine O‑acetyltransferase
	?	NC_002947	5820264 =	102 (1.170)					intergenic (+57/‑43)	PP_5096/metX	shape determination factor/homoserine O‑acetyltransferase
*	?	NC_002947	5870317 =	116 (1.310)	8 (0.120)	5/190	NT	9.8%	intergenic (+22/+112)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	5870410 =	58 (0.860)					intergenic (+115/+19)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5877040 =	130 (1.470)	6 (0.080)	5/200	NT	6.1%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877122 =	80 (1.130)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	5903827 =	68 (0.770)	11 (0.140)	9/216	NT	15.6%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903887 =	60 (0.780)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	= 5903842	65 (0.740)	4 (0.050)	3/216	NT	6.4%	intergenic (+42/+65)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903870	60 (0.780)					intergenic (+70/+37)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914213 =	28 (0.320)	11 (0.160)	10/192	NT	36.3%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914309 =	17 (0.250)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914240	25 (0.280)	13 (0.190)	10/192	NT	41.7%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914280	17 (0.250)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	5919647 =	100 (1.130)	6 (0.070)	6/230	NT	6.4%	coding (177/1674 nt)	PP_5190	type II secretion system protein
	?	NC_002947	5919691 =	83 (1.020)					coding (221/1674 nt)	PP_5190	type II secretion system protein
*	?	NC_002947	= 5943678	111 (1.260)	6 (0.080)	6/204	NT	5.7%	intergenic (+30/+55)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	= 5943699	106 (1.460)					intergenic (+51/+34)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
*	?	NC_002947	5947143 =	112 (1.270)	10 (0.120)	7/226	NT	9.6%	intergenic (‑79/+127)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
	?	NC_002947	5947248 =	87 (1.080)					intergenic (‑184/+22)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
*	?	NC_002947	6000959 =	107 (1.210)	5 (0.070)	5/188	NT	7.9%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6001053 =	35 (0.520)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	= 6006630	31 (0.350)	23 (0.370)	16/176	NT	48.0%	intergenic (+42/+57)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
	?	NC_002947	= 6006642	28 (0.450)					intergenic (+54/+45)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
*	?	NC_002947	= 6013891	44 (0.500)	9 (0.130)	9/194	NT	21.1%	intergenic (+40/+70)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
	?	NC_002947	= 6013919	33 (0.480)					intergenic (+68/+42)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
*	?	NC_002947	6032808 =	65 (0.740)	16 (0.250)	14/182	NT	33.5%	intergenic (+16/+120)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
	?	NC_002947	6032890 =	16 (0.250)					intergenic (+98/+38)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
*	?	NC_002947	= 6055208	75 (0.850)	4 (0.050)	4/232	NT	5.3%	coding (105/732 nt)	tonB	TonB energy transducing system subunit TonB
	?	NC_002947	= 6055248	73 (0.880)					coding (145/732 nt)	tonB	TonB energy transducing system subunit TonB
*	?	NC_002947	6081924 =	80 (0.910)	5 (0.060)	5/232	NT	6.2%	intergenic (‑26/+83)	PP_5334/purK	membrane protein/5‑(carboxyamino)imidazole ribonucleotide synthase
	?	NC_002947	6081958 =	76 (0.920)					intergenic (‑60/+49)	PP_5334/purK	membrane protein/5‑(carboxyamino)imidazole ribonucleotide synthase
*	?	NC_002947	6146542 =	96 (1.090)	11 (0.130)	9/246	NT	11.1%	coding (865/1023 nt)	PP_5392	WD40/YVTN repeat‑containing protein
	?	NC_002947	6146577 =	81 (0.930)					coding (830/1023 nt)	PP_5392	WD40/YVTN repeat‑containing protein
*	?	NC_002947	= 6158420	90 (1.020)	5 (0.060)	5/230	NT	5.4%	intergenic (+86/‑21)	PP_5401/PP_5739	hypothetical protein/hypothetical protein
	?	NC_002947	= 6158429	92 (1.130)					intergenic (+95/‑12)	PP_5401/PP_5739	hypothetical protein/hypothetical protein