mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM260479 | 159,885 | Δ1 bp | coding (149/939 nt) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 160,041 | G→C | G102A (GGG→GCG) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 160,043 | G→C | V103L (GTA→CTA) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 160,050 | +C | coding (314/939 nt) | h16_A0146 → | conserved hypothetical protein |
| RA | AM260479 | 208,932 | A→C | H322Q (CAT→CAG) | h16_A0195 ← | Putative GTPase (G3E family) |
| RA | AM260479 | 208,953 | A→C | V315V (GTT→GTG) | h16_A0195 ← | Putative GTPase (G3E family) |
| RA | AM260479 | 245,288 | T→G | L247V (TTG→GTG) | betA2 → | choline dehydrogenase |
| RA | AM260479 | 275,969 | +C | coding (268/558 nt) | h16_A0264 ← | Hypothetical protein |
| MC JC | AM260479 | 335,538 | Δ778 bp | [nagA]–[nagB] | [nagA], [nagB] | |
| RA | AM260479 | 342,407 | T→C | L180L (TTG→CTG) | amtB → | ammonium transporter |
| RA | AM260479 | 406,488 | G→T | L70I (CTC→ATC) | h16_A0388 ← | ABC‑type transporter, ATPase component: HAAT family |
| RA | AM260479 | 452,997 | Δ1 bp | intergenic (‑22/+116) | h16_A0432 ← / ← coxF | Uncharacterized MobA‑related protein/xanthine and CO dehydrogenase, maturation factor |
| RA | AM260479 | 518,612 | G→C | intergenic (+17/‑48) | h16_A0492 → / → pgam2 | Phospholipid‑binding protein/phosphoglycerate mutase 2 protein |
| RA | AM260479 | 547,818 | +C | intergenic (‑10/+27) | glyS ← / ← h16_A0522 | Glycyl‑tRNA synthetase beta subunit/conserved hypothetical protein |
| RA | AM260479 | 547,839 | Δ1 bp | intergenic (‑31/+6) | glyS ← / ← h16_A0522 | Glycyl‑tRNA synthetase beta subunit/conserved hypothetical protein |
| RA | AM260479 | 547,879 | 2 bp→GA | coding (595‑596/630 nt) | h16_A0522 ← | conserved hypothetical protein |
| RA | AM260479 | 561,006 | +G | intergenic (+9/+38) | h16_A0532 → / ← h16_A0533 | conserved hypothetical protein/universal stress protein, UspA family |
| RA | AM260479 | 564,366 | C→G | P73A (CCC→GCC) | h16_A0537 → | Uncharacterized protein conserved in bacteria |
| RA | AM260479 | 581,821 | +C | coding (117/1734 nt) | h16_A0555 → | zinc metalloprotease |
| RA | AM260479 | 582,589 | T→G | H295Q (CAT→CAG) | h16_A0555 → | zinc metalloprotease |
| RA | AM260479 | 582,759 | G→T | C352F (TGT→TTT) | h16_A0555 → | zinc metalloprotease |
| RA | AM260479 | 619,859 | G→T | H108N (CAC→AAC) | acrA1 ← | Cation/multidrug efflux system, mebrane‑fusion component |
| RA | AM260479 | 628,642 | Δ1 bp | coding (756/1206 nt) | h16_A0595 ← | Uncharacterized Fe‑S protein |
| RA | AM260479 | 628,654 | +C | coding (744/1206 nt) | h16_A0595 ← | Uncharacterized Fe‑S protein |
| RA | AM260479 | 637,111 | +G | intergenic (‑164/+218) | adk ← / ← kdsB | adenylate kinase/3‑Deoxy‑manno‑octulosonate cytidylyltransferase |
| RA | AM260479 | 724,768 | +C | coding (82/669 nt) | lysE → | lysine efflux permease |
| RA | AM260479 | 735,524 | +G | intergenic (‑409/+175) | h16_A0685 ← / ← h16_A0686 | hypothetical membrane spanning protein/Predictedpermease/CBS‑domain‑containing membrane protein |
| RA | AM260479 | 782,330 | +G | intergenic (‑680/‑42) | h16_A0723 ← / → h16_A0724 | hypothetical membrane protein/hypothetical membrane protein |
| RA | AM260479 | 782,333 | +A | intergenic (‑683/‑39) | h16_A0723 ← / → h16_A0724 | hypothetical membrane protein/hypothetical membrane protein |
| RA | AM260479 | 787,769 | +T | intergenic (‑549/+743) | h16_A0728 ← / ← h16_A0729 | response regulator containing CheY‑like receiver, AAA‑type ATPase, and DNA‑binding domains/transcriptional regulator, LysR‑family |
| RA | AM260479 | 787,882 | +T | intergenic (‑662/+630) | h16_A0728 ← / ← h16_A0729 | response regulator containing CheY‑like receiver, AAA‑type ATPase, and DNA‑binding domains/transcriptional regulator, LysR‑family |
| MC JC | AM260479 | 973,838 | Δ1,320 bp | [h16_A0881]–h16_A0882 | [h16_A0881], h16_A0882 | |
| RA | AM260479 | 1,042,407 | T→G | K131N (AAA→AAC) | h16_A0947 ← | Coproporphyrinogen III oxidase, Fe‑S oxidoreductase |
| RA | AM260479 | 1,056,947 | +G | intergenic (+211/‑15) | h16_A0964 → / → h16_A0965 | conserved hypothetical protein/conserved hypothetical protein |
| RA | AM260479 | 1,071,935 | +G | coding (626/627 nt) | h16_A0979 → | Hypothetical protein |
| RA | AM260479 | 1,071,996 | +G | intergenic (+60/‑123) | h16_A0979 → / → h16_A0980 | Hypothetical protein/Hypothetical protein |
| RA | AM260479 | 1,076,499 | C→T | P267L (CCG→CTG) | cpaF3 → | flp pilus assembly ATPase CpaF |
| RA | AM260479 | 1,076,517 | C→T | P273L (CCG→CTG) | cpaF3 → | flp pilus assembly ATPase CpaF |
| RA | AM260479 | 1,081,436 | +C | coding (437/447 nt) | h16_A0989 → | Hypothetical protein |
| RA | AM260479 | 1,081,530 | T→C | L30L (TTG→CTG) | h16_A0990 → | outer membrane protein and related peptidoglycan‑associated (lipo)proteins |
| RA | AM260479 | 1,089,440 | Δ1 bp | intergenic (+115/‑17) | h16_A0996 → / → h16_A0997 | FAD/FMN‑containing dehydrogenase/conserved hypothetical protein |
| RA | AM260479 | 1,112,158 | Δ1 bp | coding (2295/2469 nt) | xdhB1 ← | xanthine dehydrogenase, subunit B |
| RA | AM260479 | 1,167,791 | T→C | intergenic (+238/‑365) | h16_A1070 → / → cyoA1 | acyl dehydratase/bo3‑type quinol oxidase, subunit II |
| RA | AM260479 | 1,191,426 | Δ1 bp | coding (350/390 nt) | h16_A1095 ← | Hypothetical protein |
| RA | AM260479 | 1,191,771 | Δ1 bp | coding (5/390 nt) | h16_A1095 ← | Hypothetical protein |
| RA | AM260479 | 1,231,117 | Δ1 bp | coding (2606/2652 nt) | glnE → | glutamine synthetase adenylyltransferase |
| RA | AM260479 | 1,231,142 | Δ1 bp | coding (2631/2652 nt) | glnE → | glutamine synthetase adenylyltransferase |
| RA | AM260479 | 1,231,143 | C→G | P878A (CCC→GCC) | glnE → | glutamine synthetase adenylyltransferase |
| RA | AM260479 | 1,231,177 | Δ1 bp | intergenic (+14/‑201) | glnE → / → h16_A1128 | glutamine synthetase adenylyltransferase/Membrane protein |
| RA | AM260479 | 1,231,226 | 2 bp→CA | intergenic (+63/‑151) | glnE → / → h16_A1128 | glutamine synthetase adenylyltransferase/Membrane protein |
| RA | AM260479 | 1,240,057 | +T | intergenic (‑57/‑218) | h16_A1136 ← / → grpE | conserved hypothetical protein/molecular chaperone GrpE |
| RA | AM260479 | 1,354,645 | +C | intergenic (+98/‑15) | h16_A1248 → / → h16_A1249 | predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains/Hypothetical protein |
| RA | AM260479 | 1,402,540 | C→G | G893A (GGC→GCC) | h16_A1292 ← | ATP‑dependent transcriptional regulator,MalT‑family |
| RA | AM260479 | 1,464,365 | Δ1 bp | coding (49/552 nt) | h16_A1354 → | conserved hypothetical protein |
| RA | AM260479 | 1,464,433 | A→G | Q39Q (CAA→CAG) | h16_A1354 → | conserved hypothetical protein |
| RA | AM260479 | 1,464,435 | T→C | L40P (CTG→CCG) | h16_A1354 → | conserved hypothetical protein |
| MC JC | AM260479 | 1,464,441 | Δ37 bp | coding (125‑161/552 nt) | h16_A1354 → | conserved hypothetical protein |
| RA | AM260479 | 1,492,923 | T→C | L191L (TTG→CTG) | pdhB → | dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex |
| RA | AM260479 | 1,492,953 | T→G | S201A (TCA→GCA) | pdhB → | dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex |
| RA | AM260479 | 1,493,307 | T→G | F319V (TTC→GTC) | pdhB → | dihydrolipoamide acetyltransferase (E2) component of pyruvate dehydrogenase complex |
| MC JC | AM260479 | 1,714,344 | (CGAAGC)17→9 | coding (1338‑1385/3312 nt) | h16_A1582 → | DNA segregation ATPase FtsK/SpoIIIE related protein |
| RA | AM260479 | 1,744,688 | G→C | G211A (GGC→GCC) | h16_A1608 → | conserved hypothetical protein containing von Willebrand factor (vWF) type A |
| RA | AM260479 | 1,841,200 | +G | intergenic (‑2736/‑2680) | h16_A1684 ← / → ycaC | conserved hypothetical protein/YcaC related amidohydrolase |
| RA | AM260479 | 2,016,501 | T→C | V678V (GTT→GTC) | h16_A1857 → | Uncharacterized protein involved in exopolysaccharide biosynthesis |
| RA | AM260479 | 2,111,013 | +G | coding (553/1089 nt) | h16_A1942 → | Hypothetical protein |
| RA | AM260479 | 2,111,023 | +G | coding (563/1089 nt) | h16_A1942 → | Hypothetical protein |
| RA | AM260479 | 2,253,193 | +C | coding (243/258 nt) | h16_A2071 → | Hypothetical protein |
| RA | AM260479 | 2,274,430 | C→G | G565G (GGG→GGC) | h16_A2092 ← | Lysophospholipase, contains weak SAM‑dependent methyltransferase domain |
| RA | AM260479 | 2,303,559 | A→C | S217R (AGT→AGG) | h16_A2116 ← | Putative DNA polymerase bacteriophage‑type,uracil‑DNA glycosylase superfamily |
| RA | AM260479 | 2,517,378 | T→G | P77A (CCA→GCC) | zntA ← | putative heavy metal transporting P‑type ATPase |
| RA | AM260479 | 2,517,380 | G→C | P77A (CCA→GCC) | zntA ← | putative heavy metal transporting P‑type ATPase |
| RA | AM260479 | 2,517,386 | A→G | Y75H (TAT→CAT) | zntA ← | putative heavy metal transporting P‑type ATPase |
| RA | AM260479 | 2,579,212 | G→C | A121A (GCC→GCG) | h16_A2374 ← | Metallopeptidase, M23B subfamily |
| RA | AM260479 | 2,579,243 | A→G | I111T (ATT→ACT) | h16_A2374 ← | Metallopeptidase, M23B subfamily |
| RA | AM260479 | 2,580,039 | A→G | R155R (CGT→CGC) | h16_A2375 ← | Protein‑L‑isoaspartate carboxylmethyltransferase |
| RA | AM260479 | 2,594,082 | T→C | Q124Q (CAA→CAG) | cR ← | Recombinational DNA repair protein (RecF pathway) |
| RA | AM260479 | 2,594,128 | Δ1 bp | coding (326/957 nt) | cR ← | Recombinational DNA repair protein (RecF pathway) |
| RA | AM260479 | 2,616,505 | C→G | A45G (GCC→GGC) | h16_A2404 → | predicted esterase of the alpha‑beta hydrolase superfamily |
| RA | AM260479 | 2,787,923 | +C | intergenic (+165/‑55) | cafA2 → / → moaA1 | Ribonuclease G and E/molybdopterin biosynthesis protein |
| RA | AM260479 | 2,907,305 | 2 bp→AT | coding (181‑182/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,907,313 | Δ1 bp | coding (189/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,907,329 | Δ1 bp | coding (205/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,907,333 | Δ1 bp | coding (209/1221 nt) | h16_A2693 → | conserved hypothetical protein |
| RA | AM260479 | 2,955,197 | Δ1 bp | coding (1034/1071 nt) | h16_A2735 → | phenylpropionate dioxygenase or related ring‑hydroxylating dioxygenase, large terminal subunit |
| RA | AM260479 | 3,247,959 | 2 bp→CA | coding (723‑724/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,247,987 | Δ1 bp | coding (751/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,247,992 | Δ1 bp | coding (756/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,247,999 | Δ1 bp | coding (763/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,007 | Δ1 bp | coding (771/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,010 | C→G | A258A (GCC→GCG) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,045 | Δ1 bp | coding (809/813 nt) | h16_A3001 → | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,248,064 | +A | intergenic (+15/‑203) | h16_A3001 → / → hemK1 | transcriptional regulator, LysR‑family/methylase of polypeptide chain release factors |
| RA | AM260479 | 3,248,092 | G→C | intergenic (+43/‑175) | h16_A3001 → / → hemK1 | transcriptional regulator, LysR‑family/methylase of polypeptide chain release factors |
| RA | AM260479 | 3,301,576 | +G | intergenic (+45/‑146) | lspA → / → dfp | lipoprotein signal peptidase II/phosphopantothenoylcysteine synthetase/decarboxylase |
| RA | AM260479 | 3,302,920 | +C | coding (1199/1251 nt) | dfp → | phosphopantothenoylcysteine synthetase/decarboxylase |
| RA | AM260479 | 3,333,763 | +G | coding (5/615 nt) | serB2 → | phosphoserine phosphatase |
| MC JC | AM260479 | 3,376,159 | (CGGTGGCGCTCG)2→1 | coding (378‑389/1146 nt) | phcR ← | signal transduction histidine kinase containing a receiver domain (hybrid) |
| JC JC | AM260479 | 3,390,388 | Δ2 bp :: ISAE1 (+) +8 bp :: +CC | coding (488‑495/1047 nt) | h16_A3132 → | response regulator containing an atypical phosphorylation pocket |
| MC JC | AM260479 | 3,399,144 | Δ1,321 bp | [leuS]–h16_A3140 | [leuS], h16_A3140 | |
| RA | AM260479 | 3,461,712 | +G | coding (823/969 nt) | h16_A3204 ← | transcriptional regulator, LysR‑family |
| RA | AM260479 | 3,515,018 | C→G | noncoding (32/75 nt) | tRNA‑Pro (CGG) → | tRNA‑Pro |
| RA | AM260479 | 3,515,314 | Δ1 bp | intergenic (+253/‑570) | tRNA‑Pro (CGG) → / → pilB | tRNA‑Pro/Type IV pilus assembly protein PilB |
| RA | AM260479 | 3,515,428 | +C | intergenic (+367/‑456) | tRNA‑Pro (CGG) → / → pilB | tRNA‑Pro/Type IV pilus assembly protein PilB |
| RA | AM260479 | 3,529,526 | +G | intergenic (‑40/‑264) | secA ← / → h16_A3265 | preprotein translocase subunit SecA/Hypothetical protein |
| RA | AM260479 | 3,529,607 | +C | intergenic (‑121/‑183) | secA ← / → h16_A3265 | preprotein translocase subunit SecA/Hypothetical protein |
| RA | AM260479 | 3,602,642 | +A | intergenic (‑39/+87) | h16_A3328 ← / ← h16_A3329 | conserved hypothetical membrane protein/unassigned peptidase, M61 subfamily (glycyl aminopeptidase) |
| RA | AM260479 | 3,602,688 | (G)6→5 | intergenic (‑85/+41) | h16_A3328 ← / ← h16_A3329 | conserved hypothetical membrane protein/unassigned peptidase, M61 subfamily (glycyl aminopeptidase) |
| RA | AM260479 | 3,615,716 | +C | intergenic (+42/‑147) | prfA → / → h16_A3341 | protein chain release factor A (RF‑1)/Hypothetical protein |
| RA | AM260479 | 3,615,722 | +A | intergenic (+48/‑141) | prfA → / → h16_A3341 | protein chain release factor A (RF‑1)/Hypothetical protein |
| RA | AM260479 | 3,720,402 | G→T | D170Y (GAC→TAC) | h16_A3441 → | periplasmic multimodular transpeptidase/transglycosylase |
| RA | AM260479 | 3,905,524 | G→C | A1285G (GCC→GGC) | putA ← | bifunctional proline dehydrogenase and proline oxidase |
| RA | AM260479 | 3,972,184 | +C | intergenic (‑136/‑395) | h16_A3682 ← / → h16_A3683 | putative methyltransferase/Hypothetical protein |
| RA | AM260479 | 3,998,635 | +C | intergenic (‑221/+527) | h16_A3705 ← / ← h16_A3706 | transcriptional regulator, LysR‑family/conserved hypothetical protein |
| RA | AM260480 | 69,908 | +G | intergenic (+89/‑184) | h16_B0060 → / → h16_B0061 | conserved hypothetical membrane protein/ABC‑type transporter, periplasmic component |
| RA | AM260480 | 153,689 | +G | intergenic (‑67/+93) | h16_B0133 ← / ← h16_B0134 | conserved hypothetical protein/outer membrane protein (porin) |
| RA | AM260480 | 157,096 | +G | intergenic (‑26/+41) | h16_B0136 ← / ← h16_B0137 | cysteine desulfurase/conserved hypothetical membrane protein |
| RA | AM260480 | 159,381 | +G | intergenic (‑13/‑342) | h16_B0138 ← / → h16_B0139 | transcriptional regulator, IclR‑family/conserved hypothetical transmembrane protein |
| RA | AM260480 | 159,389 | +G | intergenic (‑21/‑334) | h16_B0138 ← / → h16_B0139 | transcriptional regulator, IclR‑family/conserved hypothetical transmembrane protein |
| RA | AM260480 | 274,470 | (G)10→9 | intergenic (+18/‑626) | h16_B0246 → / → fhaB | Hypothetical protein/filamentous hemagglutinin / adhesin |
| RA | AM260480 | 293,407 | T→A | Y759N (TAC→AAC) | flhF → | Flagellar GTP‑binding protein |
| RA | AM260480 | 433,189 | A→C | R133R (CGA→CGC) | h16_B0381 → | Acetyl‑CoA acetyltransferase |
| RA | AM260480 | 507,425 | +A | coding (27/564 nt) | h16_B0448 → | fragment of ABC‑type transport system,periplasmic component: APC family |
| RA | AM260480 | 635,877 | T→C | E259E (GAA→GAG) | fliM ← | flagellar motor switch protein |
| RA | AM260480 | 753,133 | T→C | K37E (AAG→GAG) | h16_B0675 ← | Acyl‑CoA dehydrogenase,short‑chain specific |
| RA | AM260480 | 919,006 | T→G | C159G (TGC→GGC) | h16_B0812 → | hydrolase or acyltransferase (alpha/beta hydrolase superfamily) |
| RA | AM260480 | 951,073 | +G | intergenic (‑29/+230) | h16_B0838 ← / ← h16_B0839 | conserved hypothetical protein/transcriptional regulator, CRP‑family |
| RA | AM260480 | 963,917 | Δ1 bp | intergenic (+84/‑3) | h16_B0849 → / → h16_B0850 | Acyl‑CoA dehydrogenase/Acyl‑CoA dehydrogenase, short‑chain specific |
| RA | AM260480 | 978,518 | A→G | S117G (AGC→GGC) | h16_B0862 → | cytosine deaminase or related metal‑dependent hydrolase |
| RA | AM260480 | 1,166,676 | +G | intergenic (+150/‑109) | h16_B1032 → / → h16_B1033 | conserved hypothetical protein/probable extra‑cytoplasmic solute receptor |
| RA | AM260480 | 1,192,562 | +C | coding (163/594 nt) | cccA → | cytochrome c, mono‑or diheme variant |
| RA | AM260480 | 1,326,746 | +G | intergenic (+47/‑123) | h16_B1172 → / → h16_B1173 | Amidase/MFS transporter |
| RA | AM260480 | 1,326,751 | +G | intergenic (+52/‑118) | h16_B1172 → / → h16_B1173 | Amidase/MFS transporter |
| RA | AM260480 | 1,326,761 | +G | intergenic (+62/‑108) | h16_B1172 → / → h16_B1173 | Amidase/MFS transporter |
| RA | AM260480 | 1,518,085 | C→T | A85T (GCC→ACC) | h16_B1356 ← | conserved hypothetical membrane spanning protein |
| RA | AM260480 | 1,540,787 | T→C | K465R (AAG→AGG) | coxL6 ← | Aerobic‑type carbon monoxide dehydrogenase homolog, large subunit |
| RA | AM260480 | 2,018,102 | +C | intergenic (+111/+98) | h16_B1778 → / ← h16_B1779 | putative peptidase/putative peptidase, S33 family |
| RA | AM260480 | 2,063,918 | G→A | P215L (CCG→CTG) | h16_B1826 ← | Acyl‑CoA dehydrogenase |
| RA | AM260480 | 2,135,859 | +C | intergenic (‑237/‑97) | h16_B1889 ← / → h16_B1890 | transcriptional regulator, IclR‑family/APC transporter, AAT family |
| RA | AM260480 | 2,256,779 | G→A | P94S (CCG→TCG) | h16_B1998 ← | transcriptional regulator, XRE‑family |
| RA | AM260480 | 2,295,879 | T→A | Q603L (CAG→CTG) | h16_B2042 ← | Hypothetical protein |
| RA | AM260480 | 2,308,233 | (C)5→4 | intergenic (+176/‑161) | h16_B2050 → / → h16_B2051 | response regulator containing a GGDEF effector domain/conserved hypothetical protein |
| RA | AM260480 | 2,431,093 | Δ1 bp | coding (2380/2469 nt) | h16_B2148 → | membrane carboxypeptidase |
| RA | AM260480 | 2,737,499 | A→G | intergenic (‑216/+28) | h16_B2423 ← / ← h16_B2424 | periplasmic solute binding protein/Hypothetical protein |
| RA | AM260480 | 2,737,505 | Δ1 bp | intergenic (‑222/+22) | h16_B2423 ← / ← h16_B2424 | periplasmic solute binding protein/Hypothetical protein |
| RA | AM260480 | 2,737,510 | T→G | intergenic (‑227/+17) | h16_B2423 ← / ← h16_B2424 | periplasmic solute binding protein/Hypothetical protein |
| RA | AM260480 | 2,843,580 | +G | intergenic (‑1/+68) | pip ← / ← h16_B2516 | prolyl aminopeptidase/transcriptional regulator, LysR‑family |
| MC JC | AM260480 | 2,912,452 | Δ39 bp | intergenic (+243/–) | h16_B2579 → / – | cold shock protein, DNA‑binding/– |
| RA | AY305378 | 682 | C→A | P190T (CCG→ACG) | hoxK → | membrane‑bound [NiFe] hydrogenase small subunit |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AM260479 | 55295 | 55329 | 35 | 6 [0] | [1] 3 | h16_A0040 | predicted membrane protein |
| * | * | ÷ | AM260479 | 89738 | 89811 | 74 | 7 [1] | [1] 3 | h16_A0074 | transcriptional regulator, AraC‑family |
| * | * | ÷ | AM260479 | 156392 | 156423 | 32 | 2 [0] | [0] 4 | h16_A0142 | Enoyl‑CoA hydratase |
| * | * | ÷ | AM260479 | 254004 | 254049 | 46 | 9 [0] | [1] 3 | h16_A0240 | Acetyltransferase (GNAT) family |
| * | * | ÷ | AM260479 | 254342 | 254360 | 19 | 2 [0] | [0] 3 | h16_A0241 | Uncharacterized protein, possibly involved in aromatic compounds catabolism |
| * | * | ÷ | AM260479 | 381518 | 381649 | 132 | 2 [0] | [0] 2 | ftsY | signal recognition particle receptor FtsY |
| * | * | ÷ | AM260479 | 388418 | 388495 | 78 | 2 [1] | [1] 2 | rfbB1 | dTDP‑D‑glucose 4,6‑dehydratase |
| * | * | ÷ | AM260479 | 401567 | 401673 | 107 | 3 [0] | [1] 2 | h16_A0382 | hypothetical membrane associated protein |
| * | * | ÷ | AM260479 | 442983 | 443018 | 36 | 2 [1] | [0] 2 | [h16_A0423]–[h16_A0424] | [h16_A0423],[h16_A0424] |
| * | * | ÷ | AM260479 | 570447 | 570477 | 31 | 2 [0] | [0] 2 | h16_A0542/h16_A0543 | signal transduction histidine kinase/response regulator, OmpR‑family |
| * | * | ÷ | AM260479 | 602933 | 602959 | 27 | 2 [0] | [0] 2 | [sua] | [sua] |
| * | * | ÷ | AM260479 | 620143 | 620159 | 17 | 4 [0] | [1] 2 | acrA1 | Cation/multidrug efflux system, mebrane‑fusion component |
| * | * | ÷ | AM260479 | 663335 | 663376 | 42 | 2 [0] | [1] 2 | h16_A0625 | outer membrane protein (porin) |
| * | * | ÷ | AM260479 | 718137 | 718158 | 22 | 2 [0] | [0] 4 | h16_A0667 | Sodium:sulfate symporter transmembrane region |
| * | * | ÷ | AM260479 | 735210 | 735215 | 6 | 3 [0] | [0] 2 | h16_A0685/h16_A0686 | hypothetical membrane spanning protein/Predictedpermease/CBS‑domain‑containing membrane protein |
| * | * | ÷ | AM260479 | 779816 | 779831 | 16 | 2 [0] | [0] 2 | h16_A0722/h16_A0723 | flp pilus assembly protein, pilin Flp/hypothetical membrane protein |
| * | * | ÷ | AM260479 | 780150 | 780181 | 32 | 3 [0] | [1] 5 | [h16_A0723] | [h16_A0723] |
| * | * | ÷ | AM260479 | 791435 | 791492 | 58 | 2 [0] | [0] 2 | h16_A0732 | Beta‑propeller domains of methanol dehydrogenase‑type (homolog) |
| * | * | ÷ | AM260479 | 805361 | 805447 | 87 | 2 [1] | [0] 2 | h16_A0741 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 1004326 | 1004389 | 64 | 3 [1] | [1] 2 | h16_A0912 | uncharacterized conserved protein |
| * | * | ÷ | AM260479 | 1017298 | 1017322 | 25 | 2 [1] | [0] 2 | h16_A0921 | Aerobic‑type carbon monoxide dehydrogenase homolog, small subunit |
| * | * | ÷ | AM260479 | 1129287 | 1129380 | 94 | 2 [0] | [0] 2 | [h16_A1031] | [h16_A1031] |
| * | * | ÷ | AM260479 | 1206084 | 1206181 | 98 | 2 [1] | [1] 2 | h16_A1108 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 1257829 | 1257877 | 49 | 2 [0] | [0] 2 | h16_A1156 | Site‑specific recombinase |
| * | * | ÷ | AM260479 | 1257922 | 1257925 | 4 | 2 [0] | [0] 2 | h16_A1156 | Site‑specific recombinase |
| * | * | ÷ | AM260479 | 1299808 | 1299822 | 15 | 2 [1] | [0] 2 | h16_A1195 | Beta‑lactamase |
| * | * | ÷ | AM260479 | 1381165 | 1381216 | 52 | 2 [0] | [0] 2 | h16_A1272 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 1402340 | 1402368 | 29 | 2 [0] | [0] 2 | h16_A1291/h16_A1292 | Isovaleryl‑CoA dehydrogenase/ATP‑dependent transcriptional regulator,MalT‑family |
| * | * | ÷ | AM260479 | 1647019 | 1647034 | 16 | 2 [0] | [1] 2 | h16_A1515/ispZ | Stress‑induced morphogen (activity unknown)/intracellular septation protein A |
| * | * | ÷ | AM260479 | 1741062 | 1741074 | 13 | 3 [1] | [0] 2 | h16_A1604 | MoxR‑like ATPase |
| * | * | ÷ | AM260479 | 1848005 | 1848019 | 15 | 2 [0] | [0] 2 | h16_A1692/h16_A1693 | conserved hypothetical protein/transcriptional regulator, LacI‑family |
| * | * | ÷ | AM260479 | 1993343 | 1993357 | 15 | 2 [0] | [0] 6 | h16_A1831 | Hypothetical protein |
| * | * | ÷ | AM260479 | 2040975 | 2040996 | 22 | 2 [1] | [0] 3 | mnhAB | Multisubunit Na+/H+ antiporter, MnhA and MhnB subunits |
| * | * | ÷ | AM260479 | 2154150 | 2154195 | 46 | 3 [1] | [0] 4 | h16_A1978/h16_A1979 | conserved hypothetical protein/conserved hypothetical protein |
| * | * | ÷ | AM260479 | 2241534 | 2241599 | 66 | 3 [0] | [0] 2 | h16_A2061 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 2253265 | 2253320 | 56 | 3 [1] | [1] 2 | [h16_A2072] | [h16_A2072] |
| * | * | ÷ | AM260479 | 2308989 | 2309008 | 20 | 2 [0] | [0] 2 | h16_A2123 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 2426127 | 2426147 | 21 | 2 [1] | [0] 2 | [lytT] | [lytT] |
| * | * | ÷ | AM260479 | 2443990 | 2444018 | 29 | 2 [0] | [1] 5 | h16_A2250 | Hypothetical protein |
| * | * | ÷ | AM260479 | 2449856 | 2449913 | 58 | 2 [0] | [1] 2 | h16_A2254 | ABC‑type transporter, permease component |
| * | * | ÷ | AM260479 | 2463509 | 2463521 | 13 | 2 [0] | [0] 2 | h16_A2268/h16_A2269 | uncharacterized conserved protein/bacterioferritin comigratory protein |
| * | * | ÷ | AM260479 | 2546026 | 2546110 | 85 | 3 [1] | [0] 2 | argAB | acetylglutamate kinase and acetyltransferase |
| * | * | ÷ | AM260479 | 2605419 | 2605424 | 6 | 3 [0] | [0] 2 | addB | two domain protein: Inactivated superfamily I helicase and RecB family exonuclease |
| * | * | ÷ | AM260479 | 2719291 | 2719291 | 1 | 3 [0] | [0] 2 | h16_A2504 | transcriptional regulator, DeoR‑family |
| * | * | ÷ | AM260479 | 2764464 | 2764478 | 15 | 4 [0] | [1] 3 | lepB | signal peptidase I |
| * | * | ÷ | AM260479 | 2853558 | 2853576 | 19 | 2 [0] | [1] 2 | h16_A2641 | Predicted S‑adenosylmethionine‑dependent methyltransferase |
| * | * | ÷ | AM260479 | 2869809 | 2869814 | 6 | 2 [0] | [1] 2 | h16_A2658/h16_A2659 | putative threonine efflux protein/hypothetical membrane spanning protein |
| * | * | ÷ | AM260479 | 2892625 | 2892625 | 1 | 2 [0] | [0] 2 | h16_A2680/h16_A2681 | hypothetical membrane associated protein/Hypothetical protein |
| * | * | ÷ | AM260479 | 2999759 | 2999830 | 72 | 4 [1] | [0] 5 | nhaP | NhaP‑type Na+/H+ and K+/H+ antiporters with a unique C‑terminal domain |
| * | * | ÷ | AM260479 | 3032757 | 3032776 | 20 | 2 [0] | [0] 2 | h16_A2804 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 3041897 | 3041904 | 8 | 3 [1] | [0] 3 | h16_A2814 | predicted metal‑dependent hydrolase/Putative cyclase |
| * | * | ÷ | AM260479 | 3058267 | 3058289 | 23 | 2 [0] | [1] 3 | h16_A2830 | hypothetical membrane associated protein |
| * | * | ÷ | AM260479 | 3360901 | 3360917 | 17 | 2 [0] | [0] 2 | h16_A3107 | 4‑Hydroxybenzoate octaprenyltransferase |
| * | * | ÷ | AM260479 | 3365812 | 3365855 | 44 | 3 [1] | [0] 2 | cG | ATP‑dependent DNA helicase |
| * | * | ÷ | AM260479 | 3462485 | 3462530 | 46 | 2 [0] | [0] 2 | h16_A3204 | transcriptional regulator, LysR‑family |
| * | * | ÷ | AM260479 | 3482457 | 3482542 | 86 | 2 [0] | [1] 2 | h16_A3225/h16_A3226 | ABC‑type transporter, ATPase and permease components/Hypothetical protein |
| * | * | ÷ | AM260479 | 3554407 | 3554427 | 21 | 3 [1] | [0] 4 | h16_A3287 | Hypothetical protein |
| * | * | ÷ | AM260479 | 3554487 | 3554545 | 59 | 2 [0] | [1] 3 | h16_A3287 | Hypothetical protein |
| * | * | ÷ | AM260479 | 3597184 | 3597222 | 39 | 3 [1] | [0] 2 | h16_A3326 | ABC‑type transporter, duplicated permease domains: TauT family |
| * | * | ÷ | AM260479 | 3609125 | 3609127 | 3 | 4 [0] | [0] 2 | h16_A3334 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 3623541 | 3623595 | 55 | 2 [0] | [1] 4 | h16_A3349 | conserved hypothetical protein |
| * | * | ÷ | AM260479 | 3671737 | 3671757 | 21 | 2 [0] | [0] 2 | h16_A3390/h16_A3391 | signal transduction histidine kinase/Hypothetical protein related to helicases |
| * | * | ÷ | AM260479 | 3722915 | 3722984 | 70 | 2 [1] | [0] 2 | h16_A3442/lysA2 | protein implicated in iron transport, frataxin homolog/diaminopimelate decarboxylase |
| * | * | ÷ | AM260479 | 3736552 | 3736639 | 88 | 2 [1] | [0] 2 | dsbD | Thiol:disulfide interchange protein |
| * | * | ÷ | AM260479 | 3857102 | 3857135 | 34 | 2 [0] | [0] 4 | h16_A3590 | C4‑dicarboxylate transport protein |
| * | * | ÷ | AM260479 | 3871552 | 3871597 | 46 | 3 [1] | [0] 2 | [h16_A3603] | [h16_A3603] |
| * | * | ÷ | AM260479 | 3910017 | 3910047 | 31 | 2 [0] | [0] 2 | priA | Primosomal protein N' |
| * | * | ÷ | AM260479 | 3950672 | 3950702 | 31 | 2 [0] | [0] 2 | copP2 | putative copper uptake P‑type ATPase |
| * | * | ÷ | AM260479 | 4004535 | 4004578 | 44 | 2 [0] | [0] 2 | h16_A3710 | response regulator, NarL‑family |
| * | * | ÷ | AM260480 | 81701 | 81752 | 52 | 5 [2] | [2] 3 | [h16_B0073] | [h16_B0073] |
| * | * | ÷ | AM260480 | 174678–175127 | 180000–175129 | 3–5323 | 4 [2] | [2] 3 | rrsD–[rrfD] | rrsD,tRNA‑Ile (GAT),tRNA‑Ala (TGC),rrlD,[rrfD] |
| * | * | ÷ | AM260480 | 633603 | 633678 | 76 | 6 [2] | [2] 6 | [fliQ] | [fliQ] |
| * | * | ÷ | AM260480 | 665208 | 665310 | 103 | 4 [2] | [0] 4 | [h16_B0591]–[h16_B0592] | [h16_B0591],[h16_B0592] |
| * | * | ÷ | AM260480 | 751997 | 752045 | 49 | 4 [2] | [2] 6 | h16_B0674/h16_B0675 | conserved hypothetical protein/Acyl‑CoA dehydrogenase,short‑chain specific |
| * | * | ÷ | AM260480 | 814091 | 814128 | 38 | 4 [2] | [1] 6 | [h16_B0722] | [h16_B0722] |
| * | * | ÷ | AM260480 | 867733–869616 | 872730–869620 | 5–4998 | 3 [2] | [1] 3 | [rrsE]–[rrfE] | [rrsE],tRNA‑Ile (GAT),tRNA‑Ala (TGC),rrlE,[rrfE] |
| * | * | ÷ | AM260480 | 1319183 | 1319188 | 6 | 3 [0] | [2] 4 | h16_B1167 | Hypothetical protein |
| * | * | ÷ | AM260480 | 1319234 | 1319272 | 39 | 4 [0] | [2] 3 | h16_B1167/h16_B1168 | Hypothetical protein/conserved hypothetical protein |
| * | * | ÷ | AM260480 | 1632976 | 1633011 | 36 | 4 [2] | [2] 5 | h16_B1458 | signal transduction histidine kinase |
| * | * | ÷ | AM260480 | 1637117 | 1637168 | 52 | 4 [1] | [2] 3 | h16_B1460 | MFS transporter, OFA family |
| * | * | ÷ | AM260480 | 1808105 | 1808160 | 56 | 3 [2] | [2] 4 | h16_B1604 | predicted phosphohydrolase |
| * | * | ÷ | AM260480 | 2024526 | 2024553 | 28 | 4 [2] | [1] 3 | h16_B1784 | signal transduction histidine kinase |
| * | * | ÷ | AM260480 | 2459858 | 2459921 | 64 | 3 [1] | [2] 3 | h16_B2171 | Glycosyltransferase, probably involved in cell wall biogenesis |
| * | * | ÷ | AM260480 | 2476837 | 2476891 | 55 | 4 [2] | [2] 4 | copS | signal transduction histidine kinase, copper sensor |
| * | * | ÷ | AM260480 | 2532184 | 2532212 | 29 | 3 [0] | [0] 3 | bkdA1 | 2‑Oxoisovalerate dehydrogenase E1 component,alpha subunit |
| * | * | ÷ | AM260480 | 2645577 | 2645663 | 87 | 6 [2] | [2] 3 | narX2 | signal transduction histidine kinase,nitrate/nitrite‑specific |
| * | * | ÷ | AM260480 | 2647122 | 2647215 | 94 | 3 [1] | [2] 4 | h16_B2337 | conserved hypothetical protein |
| * | * | ÷ | AM260480 | 2866443 | 2866463 | 21 | 3 [0] | [2] 8 | h16_B2539 | conserved hypothetical protein |
| * | * | ÷ | AY305378 | 9843 | 9955 | 113 | 2 [1] | [1] 3 | hypB1 | HypB1 |
| * | * | ÷ | AY305378 | 11629 | 11666 | 38 | 2 [1] | [0] 5 | hypD1 | HypD1 |
| * | * | ÷ | AY305378 | 70637 | 70660 | 24 | 2 [1] | [0] 2 | hypD2 | HypD2 |
| * | * | ÷ | AY305378 | 85291 | 85339 | 49 | 3 [1] | [0] 2 | [hoxI] | [hoxI] |
| * | * | ÷ | AY305378 | 100020 | 100197 | 178 | 2 [1] | [1] 3 | kfrA1 | putative KfrA protein |
| * | * | ÷ | AY305378 | 122130 | 122130 | 1 | 2 [0] | [0] 2 | PHG124 | putative siderophore biosynthesis protein |
| * | * | ÷ | AY305378 | 151837 | 151884 | 48 | 2 [0] | [1] 2 | PHG152/PHG153 | conserved hypothetical protein/conserved hypothetical protein |
| * | * | ÷ | AY305378 | 156481 | 156512 | 32 | 2 [1] | [0] 2 | kfrA2 | putative KfrA‑like protein |
| * | * | ÷ | AY305378 | 156595 | 156744 | 150 | 2 [0] | [0] 2 | kfrA2 | putative KfrA‑like protein |
| * | * | ÷ | AY305378 | 193698 | 193728 | 31 | 2 [1] | [0] 2 | PHG177 | putative histone‑like protein |
| * | * | ÷ | AY305378 | 262392 | 262435 | 44 | 2 [1] | [1] 3 | nosY | putative transmembrane protein |
| * | * | ÷ | AY305378 | 278071 | 278081 | 11 | 2 [0] | [0] 4 | PHG263 | conserved hypothetical protein |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 91189 | 12 (0.450) | 4 (0.160) | 4/200 | 2.0 | 20.2% | coding (1186/1233 nt) | h16_A0075 | MFS transporter, fosmidomycin resistance family |
| ? | AM260479 | = 91229 | 20 (0.780) | coding (1226/1233 nt) | h16_A0075 | MFS transporter, fosmidomycin resistance family | |||||
| * | ? | AM260479 | 116634 = | 22 (0.820) | 6 (0.240) | 6/192 | 1.5 | 23.9% | coding (696/996 nt) | h16_A0102 | probable extra‑cytoplasmic solute receptor |
| ? | AM260479 | 116673 = | 18 (0.730) | coding (735/996 nt) | h16_A0102 | probable extra‑cytoplasmic solute receptor | |||||
| * | ? | AM260479 | 124227 = | 15 (0.560) | 4 (0.160) | 4/192 | 1.9 | 25.1% | coding (59/471 nt) | h16_A0110 | conserved hypothetical protein |
| ? | AM260479 | 124250 = | 10 (0.410) | coding (36/471 nt) | h16_A0110 | conserved hypothetical protein | |||||
| * | ? | AM260479 | 252673 = | 12 (0.450) | 4 (0.160) | 4/198 | 2.0 | 27.2% | coding (121/1137 nt) | thiE | thiamine monophosphate synthase |
| ? | AM260479 | 252693 = | 10 (0.390) | coding (141/1137 nt) | thiE | thiamine monophosphate synthase | |||||
| * | ? | AM260479 | 377822 = | 12 (0.450) | 3 (0.120) | 3/192 | 2.2 | 26.0% | coding (90/1311 nt) | h16_A0359 | ABC‑type transporter, periplasmic component: NitT family |
| ? | AM260479 | 377886 = | 6 (0.240) | coding (26/1311 nt) | h16_A0359 | ABC‑type transporter, periplasmic component: NitT family | |||||
| * | ? | AM260479 | 382098 = | 12 (0.450) | 4 (0.160) | 4/196 | 2.0 | 21.4% | coding (171/1548 nt) | h16_A0364 | Predicted Zn‑dependent peptidase, M16B subfamily |
| ? | AM260479 | 382162 = | 18 (0.720) | coding (235/1548 nt) | h16_A0364 | Predicted Zn‑dependent peptidase, M16B subfamily | |||||
| * | ? | AM260479 | = 475712 | 16 (0.600) | 4 (0.150) | 3/208 | 2.4 | 20.0% | coding (304/405 nt) | h16_A0451 | conserved hypothetical protein |
| ? | AM260479 | 475718 = | 16 (0.600) | coding (310/405 nt) | h16_A0451 | conserved hypothetical protein | |||||
| * | ? | AM260479 | = 534281 | 27 (1.010) | 8 (0.320) | 6/192 | 1.5 | 23.6% | coding (444/1035 nt) | h16_A0510 | predicted phosphotransferase to Ser/Thr protein kinases |
| ? | AM260479 | = 534282 | 27 (1.100) | coding (443/1035 nt) | h16_A0510 | predicted phosphotransferase to Ser/Thr protein kinases | |||||
| * | ? | AM260479 | = 738752 | 17 (0.640) | 6 (0.240) | 5/194 | 1.7 | 26.8% | coding (238/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase |
| ? | AM260479 | = 738783 | 17 (0.680) | coding (269/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase | |||||
| * | ? | AM260479 | 739439 = | 10 (0.370) | 6 (0.240) | 6/192 | 1.5 | 42.5% | coding (925/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase |
| ? | AM260479 | 739466 = | 7 (0.280) | coding (952/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase | |||||
| * | ? | AM260479 | = 801625 | 16 (0.600) | 4 (0.160) | 4/192 | 1.9 | 21.8% | coding (2600/5826 nt) | pilL2 | Type IV pilus protein histidine kinase/response regulator hybrid PilL |
| ? | AM260479 | = 801686 | 14 (0.570) | coding (2661/5826 nt) | pilL2 | Type IV pilus protein histidine kinase/response regulator hybrid PilL | |||||
| * | ? | AM260479 | 982522 = | 16 (0.600) | 4 (0.170) | 4/186 | 1.9 | 22.0% | coding (529/909 nt) | h16_A0889 | transcriptional regulator, LysR‑family |
| ? | AM260479 | 982629 = | 14 (0.590) | coding (422/909 nt) | h16_A0889 | transcriptional regulator, LysR‑family | |||||
| * | ? | AM260479 | = 1235505 | 16 (0.600) | 4 (0.160) | 4/194 | 1.9 | 21.7% | coding (519/1755 nt) | h16_A1131 | ATPase DNA repair |
| ? | AM260479 | = 1235522 | 14 (0.560) | coding (502/1755 nt) | h16_A1131 | ATPase DNA repair | |||||
| * | ? | AM260479 | 1601171 = | 18 (0.670) | 5 (0.190) | 4/204 | 2.0 | 21.0% | coding (171/1194 nt) | h16_A1475 | acetylornithine deacetylase/Succinyl‑diaminopimelate desuccinylase or related deacylas |
| ? | AM260479 | 1601191 = | 20 (0.760) | coding (191/1194 nt) | h16_A1475 | acetylornithine deacetylase/Succinyl‑diaminopimelate desuccinylase or related deacylas | |||||
| * | ? | AM260479 | 1864240 = | 21 (0.790) | 9 (0.520) | 4/136 | 1.4 | 45.4% | intergenic (+776/‑280) | h16_A1704/h16_A1706 | transcriptional regulator, LysR‑family/putative peptidase, S08A subfamily |
| ? | AM260479 | = 1864309 | 8 (0.460) | intergenic (+845/‑211) | h16_A1704/h16_A1706 | transcriptional regulator, LysR‑family/putative peptidase, S08A subfamily | |||||
| * | ? | AM260479 | = 2917085 | 16 (0.600) | 4 (0.170) | 3/188 | 2.2 | 20.8% | coding (379/1098 nt) | h16_A2701 | uncharacterized conserved protein |
| ? | AM260479 | 2917250 = | 16 (0.660) | coding (214/1098 nt) | h16_A2701 | uncharacterized conserved protein | |||||
| * | ? | AM260479 | 3335368 = | 17 (0.640) | 4 (0.160) | 4/194 | 1.9 | 20.1% | coding (994/1542 nt) | pcnB | Poly(A) polymerase |
| ? | AM260479 | 3335398 = | 16 (0.640) | coding (1024/1542 nt) | pcnB | Poly(A) polymerase | |||||
| * | ? | AM260479 | 3422061 = | 18 (0.670) | 7 (0.290) | 5/188 | 1.7 | 28.4% | coding (609/933 nt) | h16_A3162 | Periplasmic protein TonB, links inner and outer membranes |
| ? | AM260479 | 3422097 = | 19 (0.790) | coding (573/933 nt) | h16_A3162 | Periplasmic protein TonB, links inner and outer membranes | |||||
| * | ? | AM260479 | 3902705 = | 19 (0.710) | 6 (0.250) | 4/186 | 1.9 | 26.1% | coding (1246/1965 nt) | h16_A3629 | Hypothetical protein |
| ? | AM260479 | 3902743 = | 17 (0.710) | coding (1208/1965 nt) | h16_A3629 | Hypothetical protein | |||||
| * | ? | AM260479 | = 4023841 | 27 (1.010) | 6 (0.280) | 5/168 | 1.5 | 23.2% | coding (1348/1455 nt) | h16_A3725 | signal transduction histidine kinase |
| ? | AM260479 | = 4023821 | 18 (0.840) | coding (1368/1455 nt) | h16_A3725 | signal transduction histidine kinase | |||||
| * | ? | AM260480 | 59050 = | 24 (0.790) | 4 (0.140) | 4/190 | 2.2 | 21.1% | coding (361/696 nt) | h16_B0050 | predicted phosphoribosyltransferase |
| ? | AM260480 | 59162 = | 8 (0.290) | coding (473/696 nt) | h16_B0050 | predicted phosphoribosyltransferase | |||||
| * | ? | AM260480 | 194714 = | 12 (0.390) | 6 (0.220) | 6/190 | 1.7 | 34.3% | intergenic (+16/+38) | h16_B0169/h16_B0170 | transcriptional regulator, LysR‑family/Hypothetical protein |
| ? | AM260480 | 194734 = | 12 (0.430) | intergenic (+36/+18) | h16_B0169/h16_B0170 | transcriptional regulator, LysR‑family/Hypothetical protein | |||||
| * | ? | AM260480 | 251597 = | 9 (0.290) | 3 (0.110) | 3/190 | 2.5 | 21.3% | coding (497/1023 nt) | h16_B0225 | Integrase/recombinase protein |
| ? | AM260480 | 251666 = | 14 (0.500) | coding (566/1023 nt) | h16_B0225 | Integrase/recombinase protein | |||||
| * | ? | AM260480 | = 645012 | 15 (0.490) | 5 (0.180) | 4/192 | 2.2 | 20.1% | coding (979/1332 nt) | h16_B0572 | Glucose/sorbosone dehydrogenase |
| ? | AM260480 | 645112 = | 26 (0.920) | coding (1079/1332 nt) | h16_B0572 | Glucose/sorbosone dehydrogenase | |||||
| * | ? | AM260480 | = 834171 | 23 (0.750) | 4 (0.180) | 4/156 | 1.9 | 20.4% | intergenic (+43/‑242) | h16_B0739/h16_B0740 | flavodoxin reductase (ferredoxin‑NADPH reductase) family 1/MFS transporter, AAHS family |
| ? | AM260480 | = 834145 | 14 (0.610) | intergenic (+17/‑268) | h16_B0739/h16_B0740 | flavodoxin reductase (ferredoxin‑NADPH reductase) family 1/MFS transporter, AAHS family | |||||
| * | ? | AM260480 | 854841 = | 18 (0.590) | 6 (0.220) | 5/186 | 1.9 | 29.2% | coding (668/876 nt) | h16_B0756 | Enoyl‑CoA hydratase |
| ? | AM260480 | 854888 = | 13 (0.480) | coding (621/876 nt) | h16_B0756 | Enoyl‑CoA hydratase | |||||
| * | ? | AM260480 | 1182334 = | 16 (0.520) | 6 (0.210) | 5/192 | 2.0 | 28.7% | coding (776/972 nt) | h16_B1046 | Zn‑dependent hydrolase or glyoxylase |
| ? | AM260480 | 1182383 = | 15 (0.530) | coding (825/972 nt) | h16_B1046 | Zn‑dependent hydrolase or glyoxylase | |||||
| * | ? | AM260480 | = 1397431 | 27 (0.880) | 9 (0.310) | 7/196 | 1.6 | 25.6% | coding (743/783 nt) | h16_B1238 | acid phosphatase |
| ? | AM260480 | = 1397436 | 27 (0.940) | coding (738/783 nt) | h16_B1238 | acid phosphatase | |||||
| * | ? | AM260480 | 1877625 = | 17 (0.560) | 4 (0.150) | 4/184 | 2.2 | 22.2% | coding (216/732 nt) | h16_B1666 | chitooligosaccharide deacetylase |
| ? | AM260480 | 1877666 = | 13 (0.480) | coding (257/732 nt) | h16_B1666 | chitooligosaccharide deacetylase | |||||
| * | ? | AM260480 | 2232748 = | 10 (0.330) | 3 (0.110) | 3/194 | 2.6 | 29.5% | intergenic (‑318/‑51) | h16_B1975/h16_B1976 | transcriptional regulator, IclR‑family/outer membrane receptor, TonB dependent |
| ? | AM260480 | 2232791 = | 5 (0.180) | intergenic (‑361/‑8) | h16_B1975/h16_B1976 | transcriptional regulator, IclR‑family/outer membrane receptor, TonB dependent | |||||