breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	6,332	C→A	6.2%	R17R (CGG→CGT)	trmE ←	GTPase
RA	6,339	T→A	9.8%	Q15L (CAG→CTG)	trmE ←	GTPase
RA	6,346	T→G	7.3%	T13P (ACG→CCG)	trmE ←	GTPase
RA	26,844	A→T	6.8%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	27,581	C→T	5.2%	intergenic (‑428/+18)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	27,584	A→G	5.3%	intergenic (‑431/+15)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	35,009	A→G	10.0%	intergenic (+27/+31)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	35,012	C→T	9.7%	intergenic (+30/+28)	czrSA → / ← PP_0031	metal‑sensor histidine kinase/hypothetical protein
RA	36,171	A→T	5.7%	intergenic (+56/+27)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,172	A→T	5.7%	intergenic (+57/+26)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,174	A→C	5.5%	intergenic (+59/+24)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	43,457	Δ1 bp	16.4%	intergenic (+23/+70)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	43,461:1	+A	17.3%	intergenic (+27/+66)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	45,680	C→G	7.4%	intergenic (‑156/+47)	cadA‑I ← / ← PP_0042	cadmium translocating P‑type ATPase/hypothetical protein
RA	58,747	T→A	11.9%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	12.2%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	104,876	G→C	5.9%	P345P (CCG→CCC)	PP_0099 →	hypothetical protein
RA	126,115	A→G	8.4%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	8.5%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	133,296	C→G	6.4%	P25R (CCG→CGG)	PP_0128 →	hypothetical protein
RA	146,127	T→A	5.7%	intergenic (+32/‑116)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	146,128	T→A	5.6%	intergenic (+33/‑115)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	152,157	A→T	9.3%	intergenic (‑51/+43)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	152,158	A→T	9.4%	intergenic (‑52/+42)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	162,281	A→T	5.1%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	5.1%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	165,929	G→T	8.4%	A326A (GCC→GCA)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	165,932	A→C	8.5%	D325E (GAT→GAG)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	181,811	C→T	7.7%	intergenic (+25/‑81)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,812	A→G	8.0%	intergenic (+26/‑80)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,943	C→T	23.2%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	Δ1 bp	9.3%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	9.3%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	21.5%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	7.6%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	7.9%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	41.9%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	5.3%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	14.4%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	18.3%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	18.6%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	19.0%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	5.0%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	12.5%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	5.9%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	12.6%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	9.8%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	18.9%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	22.9%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	9.1%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	17.1%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,777	T→A	5.6%	L1428Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	226,659	T→C	6.6%	intergenic (+66/‑67)	PP_0174 → / → PP_0175	hypothetical protein/transcriptional regulator
RA	226,661	A→T	7.4%	intergenic (+68/‑65)	PP_0174 → / → PP_0175	hypothetical protein/transcriptional regulator
RA	226,663	G→A	7.4%	intergenic (+70/‑63)	PP_0174 → / → PP_0175	hypothetical protein/transcriptional regulator
RA	226,907	C→G	6.0%	A61G (GCC→GGC)	PP_0175 →	transcriptional regulator
RA	233,832	A→T	7.0%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	6.4%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	6.2%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	274,785	T→G	6.7%	D388A (GAC→GCC)	PP_0222 ←	DszA family monooxygenase
RA	274,788	A→T	7.3%	L387Q (CTG→CAG)	PP_0222 ←	DszA family monooxygenase
RA	274,791	C→A	7.2%	G386V (GGC→GTC)	PP_0222 ←	DszA family monooxygenase
RA	295,247	G→A	5.4%	G217E (GGG→GAG)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	295,250	T→C	5.6%	L218P (CTC→CCC)	ssuB →	aliphatic sulfonates ABC transporter ATP‑binding protein SsuB
RA	308,740	C→T	11.5%	intergenic (+1754/‑116)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	308,741	A→G	12.0%	intergenic (+1755/‑115)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	321,742	T→C	6.3%	intergenic (+27/+431)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	321,743	G→A	5.6%	intergenic (+28/+430)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,135	G→A	30.9%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	28.4%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	326,067	C→A	6.9%	*556Y (TAG→TAT)	PP_0269 ←	glutamate synthase large subunit
RA	326,070	T→G	6.6%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	337,812	A→G	11.1%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	7.8%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	9.5%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	9.8%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	9.9%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	8.0%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	22.2%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	343,612	T→A	5.1%	intergenic (‑165/‑75)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	344,035	A→G	11.5%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	15.1%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	14.9%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	353,133	C→T	8.3%	intergenic (+97/+21)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	358,088	A→G	6.8%	intergenic (+53/‑77)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,094	G→A	8.0%	intergenic (+59/‑71)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,099	C→T	8.7%	intergenic (+64/‑66)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	384,790	A→T	5.1%	N422I (AAT→ATT)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,794	C→G	5.3%	A423A (GCC→GCG)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	401,309	C→T	8.7%	Q298* (CAG→TAG)	PP_0334 →	transposase
RA	401,316	A→C	5.2%	D300A (GAT→GCT)	PP_0334 →	transposase
RA	401,316:1	+C	5.1%	coding (899/1059 nt)	PP_0334 →	transposase
RA	407,666	A→C	6.8%	A114A (GCT→GCG)	aceF ←	AceF‑S‑acetyldihydrolipoate
RA	418,298	C→G	8.9%	L26L (CTC→CTG)	PP_0345 →	heptose kinase WapP
RA	418,299	C→G	8.3%	Q27E (CAG→GAG)	PP_0345 →	heptose kinase WapP
RA	432,996	A→T	5.9%	intergenic (+18/+29)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,997	A→T	5.9%	intergenic (+19/+28)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,998	A→T	6.9%	intergenic (+20/+27)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	471,069	T→C	6.7%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	6.9%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	474,195	Δ1 bp	8.8%	coding (793/1983 nt)	dnaG ←	DNA primase
RA	474,199	G→C	8.5%	I263M (ATC→ATG)	dnaG ←	DNA primase
RA	474,202:1	+G	8.4%	coding (786/1983 nt)	dnaG ←	DNA primase
RA	484,691	C→T	6.5%	intergenic (‑250/+33)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,695	G→C	6.9%	intergenic (‑254/+29)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,699	A→G	7.5%	intergenic (‑258/+25)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	503,834	A→T	5.0%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,835	A→T	5.4%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,840:1	+C	5.8%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	527,932	C→T	7.0%	noncoding (1167/2902 nt)	PP_23SC →	23S ribosomal RNA
RA	536,282	C→T	9.1%	noncoding (179/190 nt)	PP_mr06 ←	P27 ncRNA
RA	536,283	A→G	9.0%	noncoding (178/190 nt)	PP_mr06 ←	P27 ncRNA
RA	546,893	G→T	19.3%	G81C (GGC→TGC)	rpsG →	30S ribosomal protein S7
RA	550,552	C→G	10.7%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	550,760	G→C	38.3%	G33R (GGT→CGT)	rpsJ →	30S ribosomal protein S10
RA	554,155:1	+C	5.4%	coding (92/714 nt)	rpsC →	30S ribosomal protein S3
RA	554,160	Δ1 bp	5.1%	coding (97/714 nt)	rpsC →	30S ribosomal protein S3
RA	556,981	C→T	5.3%	R9R (CGC→CGT)	rpsN →	30S ribosomal protein S14
RA	556,989	A→C	6.9%	K12T (AAG→ACG)	rpsN →	30S ribosomal protein S14
RA	556,992	G→T	6.9%	R13L (CGT→CTT)	rpsN →	30S ribosomal protein S14
RA	566,623	C→T	5.2%	intergenic (+32/+41)	bfr‑I → / ← uvrA	bacterioferritin/uvrABC excinuclease protein A
RA	571,620	G→A	12.0%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,621	T→C	12.2%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	587,079	C→G	6.0%	P43R (CCG→CGG)	PP_0497 →	Cro/CI family transcriptional regulator
RA	591,082	G→A	5.5%	R109H (CGC→CAC)	PP_0501 →	NAD‑dependent epimerase/dehydratase family protein
RA	591,085	T→C	5.4%	V110A (GTG→GCG)	PP_0501 →	NAD‑dependent epimerase/dehydratase family protein
RA	614,313:1	+T	7.1%	intergenic (‑129/+49)	dxs ← / ← ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
RA	614,316	Δ1 bp	6.4%	intergenic (‑132/+46)	dxs ← / ← ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
RA	626,559	T→G	6.0%	K213Q (AAG→CAG)	dedA ←	inner membrane protein
RA	626,572	C→A	7.0%	L208L (CTG→CTT)	dedA ←	inner membrane protein
RA	675,590	A→T	5.2%	C38S (TGC→AGC)	PP_0577 ←	hypothetical protein
RA	675,592	C→G	5.5%	G37A (GGC→GCC)	PP_0577 ←	hypothetical protein
RA	675,594	A→T	5.4%	A36A (GCT→GCA)	PP_0577 ←	hypothetical protein
RA	693,593	C→G	5.4%	G151A (GGC→GCC)	PP_0595 ←	LysR family transcriptional regulator
RA	697,217	T→C	10.4%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	18.7%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	18.9%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,242	G→A	7.2%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	51.6%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,766:1	+G	5.2%	intergenic (+11/‑121)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,769	Δ1 bp	5.2%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	715,012:1	+T	8.3%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,019	Δ1 bp	8.8%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	727,318	C→T	6.1%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	6.0%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,320	A→G	6.0%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	735,613	A→G	5.2%	intergenic (‑36/+97)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	735,628	C→T	5.1%	intergenic (‑51/+82)	PP_0627 ← / ← PP_0628	hypothetical protein/hypothetical protein
RA	743,433	G→A	5.2%	intergenic (+109/+165)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,435	A→C	5.8%	intergenic (+111/+163)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,442	T→G	5.3%	intergenic (+118/+156)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,443	T→A	5.1%	intergenic (+119/+155)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,444	C→A	5.1%	intergenic (+120/+154)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,453	T→C	5.0%	intergenic (+129/+145)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	780,559	A→C	8.4%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	8.5%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	8.2%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	798,665	C→A	5.0%	intergenic (+17/+10)	fklB‑I → / ← PP_0685	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	850,994	C→G	9.2%	intergenic (‑574/‑231)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,995	C→G	9.2%	intergenic (‑575/‑230)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	863,901	T→A	6.0%	intergenic (+15/+21)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,902	T→A	6.0%	intergenic (+16/+20)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,903	T→A	6.0%	intergenic (+17/+19)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	867,936	G→A	6.8%	intergenic (+31/+146)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	867,937	C→T	6.9%	intergenic (+32/+145)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,054	G→T	5.2%	intergenic (+149/+28)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,055	A→C	6.1%	intergenic (+150/+27)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	870,233	G→T	7.8%	R65S (CGC→AGC)	PP_5456 ←	hypothetical protein
RA	870,234	A→C	10.1%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	883,809	T→G	14.1%	intergenic (+44/‑284)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	883,810	C→A	14.1%	intergenic (+45/‑283)	PP_0766 → / → PP_0767	hypothetical protein/LuxR family transcriptional regulator
RA	895,222	G→C	5.1%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	900,537	C→A	8.2%	intergenic (+26/+19)	PP_0784 → / ← cysZ	hypothetical protein/sulfate transport protein CysZ
RA	900,538	C→G	7.9%	intergenic (+27/+18)	PP_0784 → / ← cysZ	hypothetical protein/sulfate transport protein CysZ
RA	900,539	T→G	7.7%	intergenic (+28/+17)	PP_0784 → / ← cysZ	hypothetical protein/sulfate transport protein CysZ
RA	919,675	G→C	7.5%	intergenic (‑143/+48)	PP_5458 ← / ← PP_0800	hypothetical protein/hypothetical protein
RA	926,438	C→G	6.7%	S64T (AGT→ACT)	PP_0805 ←	outer membrane efflux protein
RA	937,766	A→T	5.4%	L2620Q (CTG→CAG)	PP_0806 ←	surface adhesion protein
RA	937,771	A→T	5.4%	A2618A (GCT→GCA)	PP_0806 ←	surface adhesion protein
RA	941,936	A→G	6.3%	V1230A (GTC→GCC)	PP_0806 ←	surface adhesion protein
RA	941,939	A→T	6.2%	V1229D (GTC→GAC)	PP_0806 ←	surface adhesion protein
RA	941,942	C→T	5.8%	G1228D (GGC→GAC)	PP_0806 ←	surface adhesion protein
RA	953,232	A→G	6.5%	H13R (CAC→CGC) ‡	cyoC →	cytochrome bo terminal oxidase subunit III
RA	953,233	C→T	6.4%	H13H (CAC→CAT) ‡	cyoC →	cytochrome bo terminal oxidase subunit III
RA	955,083	T→A	5.4%	intergenic (+34/‑279)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,085:1	+G	5.4%	intergenic (+36/‑277)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,151	Δ1 bp	11.3%	intergenic (+102/‑211)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,152	A→G	12.6%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,154	G→A	13.3%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	T→A	25.0%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,156	T→C	18.7%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158	C→T	13.8%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158:1	+T	12.7%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	961,713	G→C	5.0%	H235Q (CAC→CAG)	selD ←	selenide, water dikinase
RA	961,717	C→T	5.8%	G234D (GGC→GAC)	selD ←	selenide, water dikinase
RA	962,272	Δ1 bp	5.4%	coding (146/1035 nt)	selD ←	selenide, water dikinase
RA	962,276:1	+A	5.3%	coding (142/1035 nt)	selD ←	selenide, water dikinase
RA	972,118	T→A	6.7%	L136Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	972,121	T→A	6.7%	L137Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	975,290	A→T	6.6%	intergenic (+136/+33)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	975,291	A→T	6.8%	intergenic (+137/+32)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	980,640	T→G	6.1%	Y27D (TAT→GAT)	hscB →	DnaJ‑like molecular chaperone
RA	980,643	C→A	5.9%	R28S (CGC→AGC)	hscB →	DnaJ‑like molecular chaperone
RA	980,649	Δ1 bp	5.5%	coding (88/522 nt)	hscB →	DnaJ‑like molecular chaperone
RA	990,700	T→A	6.0%	L193Q (CTG→CAG)	PP_0856 →	lipoprotein
RA	1,013,231	A→T	26.9%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,237	C→A	25.6%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	25.7%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	23.3%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	23.4%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	22.4%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	26.2%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	18.2%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,070,265	G→C	47.4%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	43.2%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,074,712	A→T	5.0%	L50Q (CTG→CAG)	gatA ←	glutamyl‑tRNA(Gln) amidotransferase subunit A
RA	1,126,597	C→A	5.3%	intergenic (‑46/+104)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,130,198	A→T	11.1%	intergenic (‑247/+57)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,145,439	C→T	10.9%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	13.6%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	13.9%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	14.6%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,164,788	C→T	16.2%	G208D (GGC→GAC)	hexR ←	DNA‑binding transcriptional regulator
RA	1,178,755:1	+A	5.2%	intergenic (+54/+40)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,758	G→C	5.2%	intergenic (+57/+37)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,178,760	Δ1 bp	5.1%	intergenic (+59/+35)	guaA → / ← PP_1033	glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein
RA	1,184,591	G→C	21.3%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	22.2%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,231,841	Δ1 bp	5.2%	coding (878/1545 nt)	glpD ←	aerobic glycerol‑3‑phosphate dehydrogenase
RA	1,239,106	G→T	6.4%	intergenic (‑75/‑300)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,239,109	A→C	6.1%	intergenic (‑78/‑297)	argF ← / → PP_1080	ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase
RA	1,241,968:1	+T	7.4%	intergenic (+27/+31)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,241,973	Δ1 bp	7.7%	intergenic (+32/+26)	grxD → / ← bfr‑II	monothiol glutaredoxin/bacterioferritin
RA	1,244,374	A→G	5.0%	G39G (GGT→GGC) ‡	rnt ←	ribonuclease T
RA	1,244,375	C→G	5.1%	G39A (GGT→GCT) ‡	rnt ←	ribonuclease T
RA	1,244,376	C→T	5.6%	G39S (GGT→AGT) ‡	rnt ←	ribonuclease T
RA	1,245,336	G→C	5.2%	A66A (GCC→GCG)	pyrC ←	dihydroorotase
RA	1,245,340	G→C	5.0%	P65R (CCG→CGG)	pyrC ←	dihydroorotase
RA	1,245,344	G→C	5.0%	R64G (CGC→GGC)	pyrC ←	dihydroorotase
RA	1,248,220	T→C	6.0%	intergenic (+27/+41)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,223	G→A	5.7%	intergenic (+30/+38)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,224	T→G	5.8%	intergenic (+31/+37)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,253,435	G→C	6.5%	intergenic (‑75/+32)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,437	A→T	6.5%	intergenic (‑77/+30)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,439	G→C	7.2%	intergenic (‑79/+28)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,256,888	G→T	5.4%	noncoding (433/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,275,090	G→C	7.7%	intergenic (‑281/+31)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,275,093	G→C	7.9%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,294,120	C→T	5.4%	intergenic (+15/+25)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,121	A→T	5.2%	intergenic (+16/+24)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,122	A→G	5.1%	intergenic (+17/+23)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,295,019	Δ1 bp	7.9%	intergenic (+29/+41)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,024	T→A	8.3%	intergenic (+34/+36)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,027	T→A	8.3%	intergenic (+37/+33)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,031:1	+T	7.6%	intergenic (+41/+29)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,310,124	A→T	6.6%	L472Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,310,130	A→T	6.7%	L470Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,310,136	A→T	6.7%	L468Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,311,745	T→C	6.5%	intergenic (‑207/+71)	PP_1144 ← / ← rapA	membrane protein/RNA polymerase‑associated protein RapA
RA	1,311,748	G→A	5.7%	intergenic (‑210/+68)	PP_1144 ← / ← rapA	membrane protein/RNA polymerase‑associated protein RapA
RA	1,316,174	C→G	6.6%	intergenic (+43/‑58)	PP_1148 → / → PP_mr15	hypothetical protein/P20 ncRNA
RA	1,316,176	Δ1 bp	5.5%	intergenic (+45/‑56)	PP_1148 → / → PP_mr15	hypothetical protein/P20 ncRNA
RA	1,327,127	C→T	49.7%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,330,494	T→C	6.0%	intergenic (+19/‑288)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,330,500	C→T	5.2%	intergenic (+25/‑282)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,330,501	A→G	5.2%	intergenic (+26/‑281)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,330,507	G→A	5.2%	intergenic (+32/‑275)	PP_5SE → / → PP_1157	5S ribosomal RNA/acetolactate synthase
RA	1,344,106	G→T	7.2%	P13T (CCT→ACT)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,113	G→C	7.4%	A10A (GCC→GCG) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,114	G→C	7.4%	A10G (GCC→GGC) ‡	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,344,121	A→C	5.5%	C8G (TGC→GGC)	PP_1168 ←	TRAP dicarboxylate transporter subunit DctQ
RA	1,356,411	G→C	12.0%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,403,596	G→A	33.3%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	33.8%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,424,537	G→C	12.1%	intergenic (+32/+69)	PP_5467 → / ← PP_1248	hypothetical protein/LysE family transporter
RA	1,424,540:1	+T	11.0%	intergenic (+35/+66)	PP_5467 → / ← PP_1248	hypothetical protein/LysE family transporter
RA	1,424,545	Δ1 bp	10.7%	intergenic (+40/+61)	PP_5467 → / ← PP_1248	hypothetical protein/LysE family transporter
RA	1,424,549	G→C	10.6%	intergenic (+44/+57)	PP_5467 → / ← PP_1248	hypothetical protein/LysE family transporter
RA	1,425,657	T→C	8.2%	intergenic (+52/‑453)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,662	C→T	8.8%	intergenic (+57/‑448)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,663	A→G	8.0%	intergenic (+58/‑447)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,668	G→A	7.5%	intergenic (+63/‑442)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,435,822	A→T	6.7%	L50Q (CTG→CAG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,829	A→T	8.0%	C48S (TGC→AGC)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,458,124	T→G	10.2%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,126	A→T	9.0%	intergenic (+19/+21)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,128	C→A	10.2%	intergenic (+21/+19)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,463,031	A→T	10.4%	intergenic (‑100/+42)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,463,032	A→T	10.7%	intergenic (‑101/+41)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,470,634	T→G	5.1%	P224P (CCA→CCC)	alg44 ←	alginate biosynthesis protein Alg44
RA	1,475,002	T→G	9.9%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,475,003	C→A	9.6%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,504,076	T→A	8.3%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,077	T→A	8.3%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,932	A→G	26.2%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,936	G→A	27.6%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	31.2%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	29.3%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	5.5%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,088	G→T	5.8%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	5.9%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	5.9%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,526,613	G→T	6.1%	C253F (TGC→TTC)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,622	T→A	6.1%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,534,921	G→A	6.2%	intergenic (+70/‑113)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,923	T→G	6.1%	intergenic (+72/‑111)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,925	C→T	6.2%	intergenic (+74/‑109)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,931	T→C	6.0%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,935	C→T	6.2%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,940	A→G	5.5%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,944	G→A	5.4%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,544,531	C→A	19.1%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	19.1%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	20.3%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	20.3%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	20.5%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	20.4%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,551,324	G→T	20.1%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	20.0%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,555,429:1	+C	6.4%	intergenic (+25/+49)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,432	Δ1 bp	6.7%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,563,869	G→T	6.0%	intergenic (+93/+29)	PP_1372 → / ← pitB	hypothetical protein/phosphate transporter
RA	1,563,870	A→C	6.1%	intergenic (+94/+28)	PP_1372 → / ← pitB	hypothetical protein/phosphate transporter
RA	1,582,815	C→A	6.7%	intergenic (‑219/‑39)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,822	T→A	8.7%	intergenic (‑226/‑32)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,829	T→G	7.3%	intergenic (‑233/‑25)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,592,007	G→C	5.9%	intergenic (‑72/‑131)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,024	C→A	19.1%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	16.4%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,598,870	A→G	8.2%	intergenic (‑67/+64)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,874	T→C	5.8%	intergenic (‑71/+60)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,875	G→A	5.1%	intergenic (‑72/+59)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,879	C→T	7.4%	intergenic (‑76/+55)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,894	T→G	7.1%	intergenic (‑91/+40)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,606,449	A→T	6.8%	intergenic (‑157/+54)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,606,450	A→T	6.8%	intergenic (‑158/+53)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,625,312	C→T	5.1%	L523L (CTG→CTA)	nadB ←	L‑aspartate oxidase
RA	1,629,495	G→T	5.7%	Q321H (CAG→CAT)	mucB →	sigma factor AlgU regulator MucB
RA	1,629,498	A→C	5.8%	*322Y (TAA→TAC)	mucB →	sigma factor AlgU regulator MucB
RA	1,632,135	C→T	5.5%	P283S (CCT→TCT) ‡	lepA →	elongation factor 4
RA	1,632,137	T→A	5.2%	P283P (CCT→CCA) ‡	lepA →	elongation factor 4
RA	1,637,349	A→G	5.8%	intergenic (+16/+50)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,357	T→C	13.8%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,367	A→T	15.4%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	15.2%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	9.3%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,384	A→G	7.7%	intergenic (+51/+15)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,386	C→T	7.8%	intergenic (+53/+13)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,617	C→T	7.8%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,618	G→T	7.8%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	7.9%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,623	T→C	8.3%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	7.4%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,628	A→G	7.4%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	6.1%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	5.0%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,327	G→C	5.4%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	5.2%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,663,117	A→T	6.5%	intergenic (+21/+17)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,663,118	A→T	6.7%	intergenic (+22/+16)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,663,119	A→T	6.6%	intergenic (+23/+15)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,667,950	A→C	7.6%	I304L (ATC→CTC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,955	G→T	7.0%	E305D (GAG→GAT)	ffh →	signal recognition particle GTPase subunit
RA	1,667,961	C→T	7.2%	A307A (GCC→GCT)	ffh →	signal recognition particle GTPase subunit
RA	1,683,290	C→G	5.1%	intergenic (+57/‑174)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,683,293	C→G	5.0%	intergenic (+60/‑171)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,691,814	T→C	9.9%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,815	C→G	9.3%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	9.1%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	8.9%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,695,062	C→G	5.2%	A329G (GCC→GGC)	wspC →	biofilm formation methyltransferase WspC
RA	1,695,065	G→A	5.2%	R330Q (CGG→CAG)	wspC →	biofilm formation methyltransferase WspC
RA	1,695,068	T→C	5.2%	L331P (CTG→CCG)	wspC →	biofilm formation methyltransferase WspC
RA	1,698,852	Δ1 bp	6.3%	coding (558/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,698,856:1	+C	6.3%	coding (562/1014 nt)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,703,290	A→G	10.7%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	10.5%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	10.3%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	36.1%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,321	G→A	7.5%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,707,269	G→C	9.4%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,272	G→C	9.8%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,288	A→G	7.5%	intergenic (+64/+78)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,330:1	+A	5.7%	intergenic (+106/+36)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,335	Δ1 bp	5.5%	intergenic (+111/+31)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,712,122	A→T	8.7%	intergenic (+71/‑187)	ppc → / → adk	phosphoenolpyruvate carboxylase/adenylate kinase
RA	1,712,993	T→A	9.6%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	9.6%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,715,144	G→A	5.0%	E16E (GAG→GAA)	PP_1510 →	carboxyvinyl‑carboxyphosphonate phosphorylmutase
RA	1,715,149	A→C	5.3%	D18A (GAC→GCC)	PP_1510 →	carboxyvinyl‑carboxyphosphonate phosphorylmutase
RA	1,715,152	G→T	5.1%	G19V (GGC→GTC)	PP_1510 →	carboxyvinyl‑carboxyphosphonate phosphorylmutase
RA	1,731,220	C→T	5.7%	intergenic (‑91/+100)	dapE ← / ← PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
RA	1,780,108	G→A	12.1%	intergenic (+25/+81)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,786,064	T→A	9.1%	intergenic (+38/‑148)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,065	T→A	9.2%	intergenic (+39/‑147)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,066	T→A	9.1%	intergenic (+40/‑146)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,810,377	T→G	7.0%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	8.9%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,821,017	Δ1 bp	100%	coding (738/1422 nt)	PP_1624 →	group II intron‑encoding maturase
RA	1,833,466	G→A	5.1%	R201C (CGC→TGC)	PP_1637 ←	LysR family transcriptional regulator
RA	1,833,469	T→C	5.2%	T200A (ACG→GCG)	PP_1637 ←	LysR family transcriptional regulator
RA	1,843,487	G→T	17.6%	S450* (TCA→TAA)	gacS ←	sensor protein GacS
RA	1,848,839	C→A	5.2%	L80M (CTG→ATG)	cysM →	cysteine synthase B
RA	1,850,958	T→A	85.0%	M1K (ATG→AAG) †	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,851,577	G→T	9.1%	W207C (TGG→TGT)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,897,245	G→T	10.1%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,249	T→A	10.8%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,253	A→C	9.5%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,899,320	A→G	6.6%	intergenic (+348/‑172)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,915,640:1	+A	9.1%	intergenic (+26/‑263)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,644	T→A	8.3%	intergenic (+30/‑259)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,647	Δ1 bp	8.2%	intergenic (+33/‑256)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,921,591	T→A	20.1%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	20.2%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,940,454	G→C	8.0%	A289G (GCC→GGC)	PP_1740 ←	beta (1‑6) glucans synthase
RA	1,948,216	C→G	5.7%	R494R (CGG→CGC)	PP_1749 ←	acetyltransferase
RA	1,955,252	T→A	7.9%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	7.7%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,976,027:1	+G	5.4%	coding (916/1104 nt)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,976,030	Δ1 bp	5.4%	coding (919/1104 nt)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	2,010,502	T→A	5.3%	E325D (GAA→GAT) ‡	PP_1792 ←	group 2 family glycosyl transferase
RA	2,010,503	T→A	5.3%	E325V (GAA→GTA) ‡	PP_1792 ←	group 2 family glycosyl transferase
RA	2,049,346	G→T	7.5%	intergenic (‑32/+28)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,049,347	A→C	7.5%	intergenic (‑33/+27)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,051,108	T→A	5.1%	intergenic (‑63/+23)	PP_1825 ← / ← PP_1826	hypothetical protein/isochorismatase family hydrolase
RA	2,068,194	A→T	7.4%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,195	A→T	7.1%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,076,839	G→A	5.7%	S121S (AGC→AGT)	PP_1852 ←	enoyl‑ACP reductase
RA	2,087,878	C→T	5.5%	intergenic (+648/+270)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,880	A→G	5.6%	intergenic (+650/+268)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,881	C→T	5.5%	intergenic (+651/+267)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,883	A→G	5.5%	intergenic (+653/+265)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,092,469	T→A	5.6%	intergenic (+72/+19)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,470	T→A	5.7%	intergenic (+73/+18)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,095,232	G→C	11.7%	intergenic (‑240/+77)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,095,235	G→C	12.5%	intergenic (‑243/+74)	htpX ← / ← alaA	protease HtpX/glutamate‑pyruvate aminotransferase
RA	2,100,001	T→G	9.3%	intergenic (‑69/‑136)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,100,002	G→C	9.6%	intergenic (‑70/‑135)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,103,042	C→G	9.1%	noncoding (35/76 nt)	PP_t23 →	tRNA‑Gly
RA	2,109,062	A→T	5.1%	I104N (ATT→AAT)	PP_1881 ←	hypothetical protein
RA	2,139,680	C→A	5.8%	Q162H (CAG→CAT)	PP_5481 ←	hypothetical protein
RA	2,147,927	G→T	5.2%	A879D (GCC→GAC)	rne ←	ribonuclease E
RA	2,147,930	A→C	5.0%	V878G (GTC→GGC)	rne ←	ribonuclease E
RA	2,200,006:1	+C	5.8%	coding (829/1278 nt)	PP_1944 →	aminomethyltransferase
RA	2,208,183	A→T	5.1%	M118L (ATG→TTG)	PP_1951 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,228,404	G→C	7.0%	A172P (GCA→CCA)	holB →	DNA polymerase III subunit delta'
RA	2,241,611	G→C	5.1%	noncoding (35/76 nt)	PP_t25 →	tRNA‑Ala
RA	2,246,284	C→T	12.0%	intergenic (+30/+61)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,246,285	A→G	13.9%	intergenic (+31/+60)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,258,559	Δ1 bp	5.4%	coding (180/1005 nt)	asd →	aspartate‑semialdehyde dehydrogenase
RA	2,258,563:1	+G	5.4%	coding (184/1005 nt)	asd →	aspartate‑semialdehyde dehydrogenase
RA	2,265,299	Δ1 bp	5.2%	coding (316/1311 nt)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,265,303:1	+C	5.3%	coding (320/1311 nt)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,273,095	A→G	7.2%	intergenic (+17/+274)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,105	C→G	14.0%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,109	A→T	13.4%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,113	C→G	13.9%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,282,773	T→C	6.6%	intergenic (‑122/+107)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,780	T→G	9.7%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,813	T→G	41.4%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	38.7%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	38.7%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	38.8%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,855	C→A	9.8%	intergenic (‑204/+25)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,298,647	G→A	5.3%	D506D (GAC→GAT)	sbcC ←	exonuclease subunit SbcC
RA	2,313,715	A→T	6.2%	L139Q (CTG→CAG)	benE‑I ←	benzoate transport protein
RA	2,313,718	A→T	6.5%	L138Q (CTG→CAG)	benE‑I ←	benzoate transport protein
RA	2,318,704	A→G	8.6%	A301A (GCA→GCG)	PP_2039 →	acyl‑CoA dehydrogenase
RA	2,318,705	C→T	8.7%	R302C (CGC→TGC)	PP_2039 →	acyl‑CoA dehydrogenase
RA	2,342,145	C→A	6.1%	intergenic (+17/‑47)	yraO → / → PP_2058	transporter YraO/porin
RA	2,342,146	T→G	5.9%	intergenic (+18/‑46)	yraO → / → PP_2058	transporter YraO/porin
RA	2,381,445	T→G	6.8%	intergenic (+31/+56)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,381,446	C→A	5.8%	intergenic (+32/+55)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,395,626	G→C	6.4%	intergenic (‑191/+52)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,628	A→T	6.4%	intergenic (‑193/+50)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,630	G→C	7.1%	intergenic (‑195/+48)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,412,919	G→C	5.0%	intergenic (+140/‑281)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,920	G→C	5.0%	intergenic (+141/‑280)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,420,641	Δ1 bp	6.7%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	6.7%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,444,458	A→C	5.5%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,462	G→T	5.3%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,463	A→C	5.5%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,467	G→T	5.6%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,461,750	C→A	5.2%	P236T (CCG→ACG)	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,757	T→G	5.8%	V238G (GTA→GGA) ‡	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,758	A→C	5.7%	V238V (GTA→GTC) ‡	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,540,852	T→A	10.7%	intergenic (+22/+27)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,853	G→C	10.8%	intergenic (+23/+26)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,854	T→A	9.9%	intergenic (+24/+25)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,582,466	A→C	5.7%	K259Q (AAG→CAG)	PP_2263 →	sugar ABC transporter permease
RA	2,582,472	T→G	6.9%	F261V (TTC→GTC) ‡	PP_2263 →	sugar ABC transporter permease
RA	2,582,473	T→A	6.0%	F261Y (TTC→TAC) ‡	PP_2263 →	sugar ABC transporter permease
RA	2,582,474	C→A	5.7%	F261L (TTC→TTA) ‡	PP_2263 →	sugar ABC transporter permease
RA	2,582,480	G→T	6.5%	L263L (CTG→CTT)	PP_2263 →	sugar ABC transporter permease
RA	2,628,429	A→C	5.4%	A16A (GCA→GCC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,628,430	G→T	5.4%	G17C (GGC→TGC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,633,500	T→G	11.0%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,633,501	C→A	10.6%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,650,131	C→A	6.9%	intergenic (+27/+107)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,134	T→A	6.8%	intergenic (+30/+104)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,137	T→G	6.9%	intergenic (+33/+101)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,669,714	T→G	11.5%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,717	C→A	10.9%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,693,853	T→C	5.6%	V34A (GTC→GCC)	PP_2362 →	usher protein
RA	2,730,937	C→G	6.3%	R77R (CGC→CGG)	polB →	DNA polymerase II
RA	2,730,938	C→G	6.5%	P78A (CCG→GCG)	polB →	DNA polymerase II
RA	2,764,415	T→G	5.7%	A210A (GCA→GCC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,416	G→A	6.1%	A210V (GCA→GTA) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,422	C→G	5.9%	G208A (GGC→GCC)	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,428	T→C	7.1%	D206G (GAC→GGC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,429	C→A	7.2%	D206Y (GAC→TAC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,777,043	C→G	6.7%	A169P (GCA→CCA)	PP_2429 ←	membrane protein
RA	2,777,050	C→G	6.6%	W166C (TGG→TGC)	PP_2429 ←	membrane protein
RA	2,795,013	A→G	5.5%	intergenic (+78/+34)	PP_2447 → / ← puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
RA	2,795,016	T→C	5.5%	intergenic (+81/+31)	PP_2447 → / ← puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
RA	2,799,214	A→G	15.8%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,220	C→T	15.7%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,223	A→G	15.4%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,229	C→T	15.5%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,810,636	C→A	5.5%	P334T (CCG→ACG)	thrS →	threonine‑‑tRNA ligase
RA	2,810,641	C→G	5.6%	C335W (TGC→TGG)	thrS →	threonine‑‑tRNA ligase
RA	2,810,646	T→G	5.3%	V337G (GTG→GGG)	thrS →	threonine‑‑tRNA ligase
RA	2,816,637	T→A	7.8%	I21N (ATT→AAT)	PP_2472 →	MerR family transcriptional regulator
RA	2,824,560	G→T	6.0%	E44* (GAG→TAG) ‡	PP_2478 →	isoquinoline 1‑oxidoreductase subunit beta
RA	2,824,561	A→C	5.9%	E44A (GAG→GCG) ‡	PP_2478 →	isoquinoline 1‑oxidoreductase subunit beta
RA	2,830,015	T→G	6.0%	H192Q (CAT→CAG)	PP_2482 →	molybdenum cofactor biosynthesis protein A
RA	2,830,016	C→A	6.3%	L193M (CTG→ATG)	PP_2482 →	molybdenum cofactor biosynthesis protein A
RA	2,852,440	T→A	12.2%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,868,532	G→T	6.7%	intergenic (+28/‑903)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,868,534	C→G	6.4%	intergenic (+30/‑901)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,868,536	A→C	7.2%	intergenic (+32/‑899)	PP_2520 → / → PP_2522	hypothetical protein/transposase
RA	2,873,799:1	+T	7.1%	intergenic (+62/+20)	cigR → / ← PP_2527	membrane protein/membrane protein
RA	2,873,802	Δ1 bp	7.0%	intergenic (+65/+17)	cigR → / ← PP_2527	membrane protein/membrane protein
RA	2,899,279	A→T	5.0%	intergenic (+48/+20)	PP_2552 → / ← PP_2553	DOPA decarboxylase/MFS transporter
RA	2,899,281	A→T	5.1%	intergenic (+50/+18)	PP_2552 → / ← PP_2553	DOPA decarboxylase/MFS transporter
RA	2,951,377	G→C	19.3%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	21.5%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	21.7%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,392	G→C	21.2%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,958,815	A→G	6.4%	intergenic (+38/+104)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,816	T→C	7.3%	intergenic (+39/+103)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,833	T→C	9.7%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,842	G→C	8.5%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,843	T→C	8.5%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,846	G→C	9.6%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,849	G→A	8.3%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,850	G→C	8.7%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,859	G→A	9.0%	intergenic (+82/+60)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,982,735	C→G	7.0%	G163R (GGT→CGT)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,982,740	C→G	6.6%	R161P (CGC→CCC)	PP_2608 ←	shikimate dehydrogenase family protein
RA	3,001,858	C→G	6.8%	A180G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,001,864	G→A	8.3%	R182Q (CGG→CAG)	PP_2625 →	hypothetical protein
RA	3,001,867	G→C	7.9%	G183A (GGC→GCC)	PP_2625 →	hypothetical protein
RA	3,001,870	T→C	6.1%	L184P (CTG→CCG)	PP_2625 →	hypothetical protein
RA	3,001,876	C→G	6.2%	A186G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,008,356	A→G	5.9%	M261T (ATG→ACG)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,030,456	C→G	7.2%	intergenic (+413/‑281)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,460	G→C	7.0%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,463	G→C	7.0%	intergenic (+420/‑274)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,045,948	T→C	5.6%	L161P (CTG→CCG)	pstA →	phosphate ABC transporter permease
RA	3,048,628	T→C	6.2%	intergenic (+40/‑256)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,633	A→G	7.1%	intergenic (+45/‑251)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,647	G→T	11.5%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,648	A→C	12.1%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,053,261	G→A	6.2%	intergenic (+19/+27)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,263	T→C	6.3%	intergenic (+21/+25)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,264	G→A	6.1%	intergenic (+22/+24)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,266	T→C	6.4%	intergenic (+24/+22)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,065,574	C→G	7.6%	P157P (CCC→CCG)	PP_2677 →	hypothetical protein
RA	3,065,582	A→T	5.7%	E160V (GAG→GTG)	PP_2677 →	hypothetical protein
RA	3,076,138	C→A	5.3%	intergenic (‑43/+31)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,076,140	C→T	5.1%	intergenic (‑45/+29)	PP_2685 ← / ← PP_2686	hypothetical protein/transglutaminase domain‑containing protein
RA	3,146,621	G→C	7.1%	intergenic (+14/+52)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,622	G→C	8.0%	intergenic (+15/+51)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,654	T→C	8.7%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,657	G→A	7.9%	intergenic (+50/+16)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,162,570	G→A	5.1%	intergenic (+474/‑106)	PP_2776 → / → PP_2777	homocysteine S‑methyltransferase family protein/acyl carrier protein
RA	3,189,321	G→C	10.7%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,189,322	G→C	9.5%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,198,945	A→T	5.7%	intergenic (‑246/+31)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,198,949	A→T	5.8%	intergenic (‑250/+27)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,198,953	A→T	6.0%	intergenic (‑254/+23)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,204,793	G→A	5.4%	P18P (CCG→CCA)	PP_2811 →	hypothetical protein
RA	3,204,797	G→C	5.7%	A20P (GCA→CCA)	PP_2811 →	hypothetical protein
RA	3,204,801	T→C	5.5%	M21T (ATG→ACG)	PP_2811 →	hypothetical protein
RA	3,236,191	G→T	6.4%	G415C (GGT→TGT) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,236,193	T→A	5.8%	G415G (GGT→GGA) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,236,195	A→C	5.8%	Q416P (CAG→CCG)	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,249,705	A→C	8.1%	K428Q (AAG→CAG)	ureC →	urease subunit alpha
RA	3,249,710	G→T	8.9%	L429L (CTG→CTT)	ureC →	urease subunit alpha
RA	3,252,535	G→A	5.5%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,540	T→C	5.7%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,255,886	C→T	8.8%	intergenic (‑106/+30)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,255,889	T→G	7.7%	intergenic (‑109/+27)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,255,892	C→A	6.5%	intergenic (‑112/+24)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,255,895	A→G	7.4%	intergenic (‑115/+21)	PP_2852 ← / ← PP_2853	sulfatase domain‑containing protein/hypothetical protein
RA	3,274,879	T→A	5.1%	H198Q (CAT→CAA)	eamA →	O‑acetylserine/cysteine export transporter
RA	3,274,881	C→G	5.0%	A199G (GCC→GGC)	eamA →	O‑acetylserine/cysteine export transporter
RA	3,274,883	T→A	5.6%	L200M (TTG→ATG)	eamA →	O‑acetylserine/cysteine export transporter
RA	3,294,391	G→A	5.9%	G1211E (GGG→GAG)	PP_2893 →	hypothetical protein
RA	3,294,402	T→C	5.3%	S1215P (TCA→CCA)	PP_2893 →	hypothetical protein
RA	3,300,205	T→A	5.1%	intergenic (+60/+22)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,206	T→A	5.1%	intergenic (+61/+21)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,313,868	C→A	7.8%	intergenic (+30/‑129)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,313,871	T→G	7.9%	intergenic (+33/‑126)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,337,816	Δ1 bp	7.2%	coding (977/1047 nt)	PP_2934 →	hypothetical protein
RA	3,337,825	G→C	8.7%	G329A (GGG→GCG)	PP_2934 →	hypothetical protein
RA	3,337,827	T→A	8.3%	S330T (TCG→ACG) ‡	PP_2934 →	hypothetical protein
RA	3,337,829	G→C	8.7%	S330S (TCG→TCC) ‡	PP_2934 →	hypothetical protein
RA	3,340,622:1	+A	5.9%	coding (249/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,340,627	Δ1 bp	5.8%	coding (244/1587 nt)	ybiT ←	ABC‑F family ATPase
RA	3,378,190	G→C	6.1%	E66Q (GAG→CAG)	PP_2978 →	hypothetical protein
RA	3,380,579	A→G	6.8%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,583	T→A	6.6%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,587	C→T	6.6%	V72V (GTC→GTT)	tnpT‑I →	cointegrate resolution protein T
RA	3,397,589	C→T	5.0%	G9G (GGC→GGT)	PP_3002 →	shikimate dehydrogenase‑like protein
RA	3,418,562	G→A	6.9%	intergenic (‑108/+51)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,418,565	T→C	7.1%	intergenic (‑111/+48)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,420,694	A→T	6.3%	intergenic (‑41/+68)	PP_3035 ← / ← PP_5554	hypothetical protein/hypothetical protein
RA	3,420,695	A→T	6.2%	intergenic (‑42/+67)	PP_3035 ← / ← PP_5554	hypothetical protein/hypothetical protein
RA	3,453,506	C→T	5.9%	intergenic (‑17/+96)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,453,523	A→G	7.3%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,466,098	G→C	6.8%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,099	A→T	6.7%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,100	A→T	6.4%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,101	G→C	6.0%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,490,910	G→C	5.3%	P175R (CCG→CGG) ‡	clpV ←	protein ClpV1
RA	3,490,911	G→C	5.3%	P175A (CCG→GCG) ‡	clpV ←	protein ClpV1
RA	3,507,789	T→G	6.7%	F32C (TTC→TGC) ‡	PP_3105 →	membrane protein
RA	3,507,790	C→A	6.7%	F32L (TTC→TTA) ‡	PP_3105 →	membrane protein
RA	3,520,124	T→A	6.3%	intergenic (+700/‑180)	PP_5580 → / → PP_5582	hypothetical protein/hypothetical protein
RA	3,528,036	A→G	6.1%	S402G (AGC→GGC)	imuB →	DNA repair DNA linked protein
RA	3,528,039	C→T	5.2%	R403C (CGC→TGC)	imuB →	DNA repair DNA linked protein
RA	3,554,502	G→C	5.9%	L25L (CTG→CTC)	PP_3139 →	group 1 family glycosyl transferase
RA	3,554,503	G→C	6.0%	E26Q (GAG→CAG)	PP_3139 →	group 1 family glycosyl transferase
RA	3,584,941	G→T	6.3%	intergenic (+45/‑90)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,584,942	A→C	6.8%	intergenic (+46/‑89)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,591,619	T→A	5.4%	L258M (TTG→ATG) ‡	PP_3169 →	membrane protein
RA	3,591,620	T→A	5.3%	L258* (TTG→TAG) ‡	PP_3169 →	membrane protein
RA	3,624,187	G→C	5.3%	intergenic (‑92/+81)	PP_3194 ← / ← PP_3195	hypothetical protein/hypothetical protein
RA	3,628,125	C→G	6.5%	intergenic (+11/‑129)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,633,178	C→T	6.4%	L203L (CTG→TTG)	PP_3201 →	BNR domain‑containing protein
RA	3,644,991	C→T	7.9%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,644,994	A→G	7.6%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,686,477	A→C	5.1%	D281A (GAC→GCC)	PP_3251 →	hypothetical protein
RA	3,688,218	Δ1 bp	6.1%	coding (292/1107 nt)	PP_3253 →	carboxylate‑amine ligase
RA	3,688,223	G→T	6.1%	L99L (CTG→CTT)	PP_3253 →	carboxylate‑amine ligase
RA	3,688,230	A→C	5.8%	K102Q (AAG→CAG)	PP_3253 →	carboxylate‑amine ligase
RA	3,694,072	T→G	5.0%	R713R (CGA→CGC)	ligD ←	DNA ligase D
RA	3,717,790:1	+G	8.0%	coding (52/1518 nt)	paaH ←	3‑hydroxyacyl‑CoA dehydrogenase PaaC
RA	3,727,163:1	+T	6.1%	coding (333/645 nt)	PP_3292 →	membrane protein
RA	3,727,168	T→A	6.3%	L113Q (CTG→CAG)	PP_3292 →	membrane protein
RA	3,727,171	T→A	6.3%	L114Q (CTG→CAG)	PP_3292 →	membrane protein
RA	3,727,176	Δ1 bp	6.3%	coding (346/645 nt)	PP_3292 →	membrane protein
RA	3,753,638	G→T	13.6%	A96A (GCC→GCA)	PP_3316 ←	chaperone‑associated ATPase
RA	3,753,641	A→C	13.7%	V95V (GTT→GTG)	PP_3316 ←	chaperone‑associated ATPase
RA	3,763,545	A→G	9.1%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,547	G→C	9.8%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,549	C→T	9.7%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,778,612	C→T	5.7%	V541V (GTC→GTT)	PP_3340 →	TonB‑dependent receptor
RA	3,778,613	A→G	5.6%	N542D (AAC→GAC)	PP_3340 →	TonB‑dependent receptor
RA	3,791,147	G→T	6.5%	G183V (GGC→GTC) ‡	PP_3353 →	sulfatase‑modifying protein
RA	3,791,148	C→T	6.5%	G183G (GGC→GGT) ‡	PP_3353 →	sulfatase‑modifying protein
RA	3,791,153	A→G	6.6%	E185G (GAA→GGA) ‡	PP_3353 →	sulfatase‑modifying protein
RA	3,791,154	A→C	7.5%	E185D (GAA→GAC) ‡	PP_3353 →	sulfatase‑modifying protein
RA	3,791,448	C→G	5.5%	G283G (GGC→GGG)	PP_3353 →	sulfatase‑modifying protein
RA	3,791,453	C→G	6.1%	A285G (GCC→GGC)	PP_3353 →	sulfatase‑modifying protein
RA	3,793,935	A→T	12.5%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,940	A→T	12.5%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,797,885	C→G	5.7%	S51T (AGC→ACC)	vdh ←	vanillin dehydrogenase
RA	3,797,890	A→T	6.0%	A49A (GCT→GCA)	vdh ←	vanillin dehydrogenase
RA	3,797,893	A→T	6.0%	A48A (GCT→GCA)	vdh ←	vanillin dehydrogenase
RA	3,798,742:1	+A	11.5%	coding (201/831 nt)	PP_3358 ←	hydroxycinnamoyl‑CoA hydratase‑lyase
RA	3,798,747	A→T	11.5%	W66R (TGG→AGG)	PP_3358 ←	hydroxycinnamoyl‑CoA hydratase‑lyase
RA	3,798,752	Δ1 bp	11.3%	coding (191/831 nt)	PP_3358 ←	hydroxycinnamoyl‑CoA hydratase‑lyase
RA	3,800,882	A→G	8.5%	intergenic (+49/+30)	PP_3360 → / ← PP_3361	membrane protein/aminotransferase
RA	3,800,887	C→T	7.8%	intergenic (+54/+25)	PP_3360 → / ← PP_3361	membrane protein/aminotransferase
RA	3,813,291:1	+A	5.3%	coding (325/852 nt)	PP_3369 →	LysR family transcriptional regulator
RA	3,876,562	Δ1 bp	7.0%	coding (1010/1212 nt)	xcpS →	type II secretion pathway protein XcpS
RA	3,876,566:1	+A	6.8%	coding (1014/1212 nt)	xcpS →	type II secretion pathway protein XcpS
RA	3,878,858	G→C	6.1%	V217L (GTG→CTG)	mexF →	multidrug RND transporter MexF
RA	3,878,865	C→G	6.2%	A219G (GCC→GGC)	mexF →	multidrug RND transporter MexF
RA	3,878,872	G→C	6.0%	Q221H (CAG→CAC)	mexF →	multidrug RND transporter MexF
RA	3,883,615	C→G	7.1%	A197G (GCC→GGC) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,883,616	C→G	6.5%	A197A (GCC→GCG) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,914,477	G→C	6.0%	R118R (CGC→CGG)	PP_3454 ←	transcriptional regulator
RA	3,921,923	T→A	6.9%	intergenic (‑114/+26)	acs ← / ← peaD	acyl‑CoA synthetase/quinohemoprotein amine dehydrogenase subunit beta
RA	3,921,924	T→A	6.9%	intergenic (‑115/+25)	acs ← / ← peaD	acyl‑CoA synthetase/quinohemoprotein amine dehydrogenase subunit beta
RA	3,926,267	C→T	6.3%	A90T (GCC→ACC)	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,941,121:1	+A	5.5%	coding (123/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,941,126	Δ1 bp	5.3%	coding (118/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,960,657	T→C	6.2%	intergenic (‑229/‑100)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,960,659	T→A	5.5%	intergenic (‑231/‑98)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,960,661	G→A	5.2%	intergenic (‑233/‑96)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,969,020	A→C	6.4%	I368I (ATA→ATC)	PP_3498 →	transposase
RA	3,984,087	A→C	5.3%	intergenic (+37/+153)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,996,941	G→T	5.6%	P89H (CCT→CAT)	PP_3525 ←	hypothetical protein
RA	3,996,944	A→C	6.4%	M88R (ATG→AGG)	PP_3525 ←	hypothetical protein
RA	4,022,850	C→G	5.3%	intergenic (‑501/+167)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,022,851	C→G	6.0%	intergenic (‑502/+166)	PP_3547 ← / ← emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
RA	4,049,951	A→G	39.4%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	41.8%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	41.7%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,050,054	C→A	6.7%	L15M (CTG→ATG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,050,055	T→G	6.6%	L15R (CTG→CGG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,073,653	G→A	9.1%	intergenic (‑147/+477)	mdtA ← / ← PP_3586	multidrug transporter membrane fusion protein/transposase
RA	4,073,654	T→C	9.2%	intergenic (‑148/+476)	mdtA ← / ← PP_3586	multidrug transporter membrane fusion protein/transposase
RA	4,103,395	C→A	5.2%	intergenic (‑106/‑111)	PP_3611 ← / → PP_3612	hypothetical protein/TonB‑dependent receptor
RA	4,103,397	T→A	5.0%	intergenic (‑108/‑109)	PP_3611 ← / → PP_3612	hypothetical protein/TonB‑dependent receptor
RA	4,103,399	T→G	5.1%	intergenic (‑110/‑107)	PP_3611 ← / → PP_3612	hypothetical protein/TonB‑dependent receptor
RA	4,141,212	T→A	6.1%	L44Q (CTG→CAG)	PP_3645 →	L‑proline amide hydrolase
RA	4,142,724	C→T	7.0%	I271I (ATC→ATT)	PP_3646 →	aldehyde dehydrogenase family protein
RA	4,142,725	A→G	7.0%	N272D (AAT→GAT)	PP_3646 →	aldehyde dehydrogenase family protein
RA	4,143,926	T→A	14.9%	intergenic (+35/‑88)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,143,927	T→A	14.4%	intergenic (+36/‑87)	PP_3647 → / → PP_3648	oxidoreductase/carboxymuconolactone decarboxylase family protein
RA	4,150,078	A→T	5.8%	intergenic (+33/‑364)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,150,079	A→T	5.8%	intergenic (+34/‑363)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,156,185	A→T	8.3%	L217* (TTA→TAA)	PP_3659 ←	transcriptional regulator, AraC family
RA	4,159,187	C→T	5.6%	intergenic (+91/‑118)	PP_3661 → / → PP_3662	membrane protein/hypothetical protein
RA	4,162,143	T→C	10.4%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,147	T→A	9.6%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,148	T→A	9.4%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,152	G→A	10.0%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,162	T→C	5.6%	intergenic (‑62/+15)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,734	A→T	5.4%	intergenic (+40/+77)	PP_3665 → / ← PP_3666	AraC family transcriptional regulator/MHS family metabolite MFS transporter
RA	4,165,671	C→T	6.6%	G159R (GGG→AGG)	PP_3666 ←	MHS family metabolite MFS transporter
RA	4,165,672	A→G	6.2%	P158P (CCT→CCC)	PP_3666 ←	MHS family metabolite MFS transporter
RA	4,170,224	T→G	7.5%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,226	A→T	7.3%	intergenic (‑290/‑97)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,227	A→T	7.1%	intergenic (‑291/‑96)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,229	C→A	6.6%	intergenic (‑293/‑94)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,200,256	T→A	5.4%	R276* (AGA→TGA)	PP_3690 ←	hypothetical protein
RA	4,200,259	T→A	6.4%	N275Y (AAT→TAT)	PP_3690 ←	hypothetical protein
RA	4,240,146	A→C	6.6%	I63S (ATC→AGC)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,240,149	G→C	6.8%	A62G (GCC→GGC)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,240,152	G→T	8.0%	A61D (GCT→GAT)	PP_3717 ←	LuxR family transcriptional regulator
RA	4,241,038	C→G	5.1%	M235I (ATG→ATC)	PP_3718 ←	aminotransferase
RA	4,244,402	G→C	5.1%	S221R (AGC→AGG)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,245,027	T→G	5.6%	D13A (GAC→GCC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,245,030	C→A	5.5%	G12V (GGC→GTC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,246,229	C→G	7.0%	M30I (ATG→ATC)	alr ←	alanine racemase
RA	4,246,232	C→G	7.1%	S29S (TCG→TCC)	alr ←	alanine racemase
RA	4,264,925	T→C	5.0%	F32L (TTC→CTC)	vanB →	vanillate O‑demethylase oxidoreductase
RA	4,305,648	G→A	6.0%	R151C (CGC→TGC)	PP_3777 ←	hypothetical protein
RA	4,305,651	G→A	5.0%	Q150* (CAG→TAG)	PP_3777 ←	hypothetical protein
RA	4,305,652	T→C	5.5%	L149L (CTA→CTG)	PP_3777 ←	hypothetical protein
RA	4,305,655	T→C	5.3%	A148A (GCA→GCG)	PP_3777 ←	hypothetical protein
RA	4,311,358	T→A	7.5%	F12I (TTT→ATT) ‡	PP_3784 →	hypothetical protein
RA	4,311,359	T→A	8.1%	F12Y (TTT→TAT) ‡	PP_3784 →	hypothetical protein
RA	4,316,066	A→C	9.8%	A35A (GCA→GCC)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,069	G→T	9.6%	A36A (GCG→GCT)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,338,537	A→T	21.7%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,538	A→T	21.7%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,348,749	A→G	44.8%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,353,340	C→G	8.0%	P141R (CCG→CGG)	yrpB →	2‑nitropropane dioxygenase
RA	4,360,328	Δ1 bp	8.5%	coding (838/1161 nt)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,333	G→C	8.3%	A278G (GCC→GGC)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,337:1	+G	7.6%	coding (829/1161 nt)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,362,658	C→G	5.7%	intergenic (‑135/‑301)	PP_5634 ← / → adhP	hypothetical protein/alcohol dehydrogenase
RA	4,375,488	A→T	5.4%	V31D (GTC→GAC)	PP_5637 ←	hypothetical protein
RA	4,375,490	T→G	5.3%	R30R (CGA→CGC)	PP_5637 ←	hypothetical protein
RA	4,395,567	G→C	5.3%	A84G (GCC→GGC)	PP_3871 ←	hypothetical protein
RA	4,442,672	C→G	7.3%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,673	C→G	7.3%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,446,538	G→C	5.1%	L357L (CTC→CTG)	nicC ←	6‑hydroxynicotinate 3‑monooxygenase
RA	4,450,173	C→G	9.7%	A68G (GCC→GGC)	nicA →	nicotinate dehydrogenase subunit A
RA	4,463,997	A→T	9.7%	*139C (TGA→TGT)	PP_3956 →	hypothetical protein
RA	4,464,000	G→C	9.6%	intergenic (+3/+25)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,464,003	A→T	9.5%	intergenic (+6/+22)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,479,221	G→C	6.3%	W176C (TGG→TGC)	ybdR →	Zn‑dependent oxidoreductase
RA	4,501,341	A→T	6.7%	intergenic (‑236/+19)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,501,344	A→T	6.7%	intergenic (‑239/+16)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,512,506	C→A	6.5%	G9V (GGT→GTT)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,512,509	T→G	6.2%	N8T (AAC→ACC)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,520,498	A→T	6.8%	intergenic (+45/+27)	cspD → / ← icd	DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase
RA	4,522,283	T→G	5.6%	F30V (TTC→GTC) ‡	idh →	isocitrate dehydrogenase
RA	4,522,285	C→G	5.3%	F30L (TTC→TTG) ‡	idh →	isocitrate dehydrogenase
RA	4,522,287	C→A	5.3%	T31N (ACC→AAC)	idh →	isocitrate dehydrogenase
RA	4,530,069	T→A	18.3%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,070	T→A	18.6%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,541,821:1	+G	6.9%	coding (494/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,825	Δ1 bp	7.1%	coding (498/1503 nt)	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,604,250	C→G	5.7%	P12A (CCG→GCG) ‡	PP_4076 →	hypothetical protein
RA	4,604,251	C→G	5.7%	P12R (CCG→CGG) ‡	PP_4076 →	hypothetical protein
RA	4,632,641	G→C	6.7%	noncoding (35/76 nt)	PP_t59 ←	tRNA‑Gly
RA	4,635,260	G→A	27.7%	T181I (ACT→ATT)	uvrY ←	BarA/UvrY two‑componenent system response regulator
RA	4,635,282	G→A	8.1%	L174F (CTC→TTC)	uvrY ←	BarA/UvrY two‑componenent system response regulator
RA	4,673,595	G→C	7.0%	P107P (CCG→CCC)	PP_4137 →	outer membrane siderophore receptor
RA	4,673,596	G→C	7.1%	G108R (GGG→CGG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,673,597	G→C	7.1%	G108A (GGG→GCG) ‡	PP_4137 →	outer membrane siderophore receptor
RA	4,681,856	A→G	5.5%	S34G (AGC→GGC)	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,705,448	T→C	12.0%	intergenic (‑140/+37)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,449	C→T	12.0%	intergenic (‑141/+36)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,459	T→A	13.4%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	14.4%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,470	A→G	11.4%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,471	G→A	9.8%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,717,282	G→A	14.5%	E110K (GAG→AAG)	fabA →	3R‑3‑hydroxydecanoyl‑ACP dehydratase
RA	4,730,172	T→C	5.9%	S440G (AGT→GGT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,730,173	G→A	5.5%	T439T (ACC→ACT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,740,841	T→G	14.3%	intergenic (+32/+720)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,842	C→A	14.3%	intergenic (+33/+719)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,273:1	+C	77.3%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	22.1%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	77.3%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275:1	+G	13.6%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	100%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	100%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	2 bp→CT	100%	intergenic (+476/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	56.8%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	43.4%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	43.2%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	56.5%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	42.3%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	Δ1 bp	55.4%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,778,504	T→G	6.3%	I270L (ATC→CTC)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,778,505	C→A	6.1%	E269D (GAG→GAT)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,796,649	A→G	21.5%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,657	C→T	28.8%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,659	G→C	27.2%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,662	G→C	25.5%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,664	A→G	25.1%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,672	C→T	27.2%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,808,234	G→C	10.1%	intergenic (‑298/‑257)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,808,237	G→C	10.3%	intergenic (‑301/‑254)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,812,228	C→T	5.9%	intergenic (+103/‑290)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,229	A→T	6.1%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,230	A→G	6.1%	intergenic (+105/‑288)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,826,908	G→T	5.8%	L1443M (CTG→ATG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,826,912	G→C	5.1%	R1441R (CGC→CGG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,826,915	G→C	5.2%	G1440G (GGC→GGG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,842,941	Δ1 bp	22.4%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	22.0%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,851,736	T→A	5.9%	intergenic (+83/+36)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,851,737	T→A	5.0%	intergenic (+84/+35)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,858,564	A→C	5.3%	intergenic (‑25/+200)	PP_mr50 ← / ← ligA	Bacteria_large_SRP ncRNA/DNA ligase
RA	4,861,172	A→G	7.2%	intergenic (‑78/+159)	ligA ← / ← PP_4275	DNA ligase/cell division protein ZipA
RA	4,882,252:1	+A	5.4%	coding (1290/1356 nt)	uacT →	uric acid permease
RA	4,882,257	Δ1 bp	5.3%	coding (1295/1356 nt)	uacT →	uric acid permease
RA	4,896,422	C→T	9.4%	intergenic (+10/‑198)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,444	T→C	5.4%	intergenic (+32/‑176)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,900,096	G→A	5.2%	intergenic (+12/‑486)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,110	A→G	17.3%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	17.1%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	17.0%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	17.4%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,716	G→A	6.6%	V196M (GTG→ATG) ‡	PP_4310 →	hydantoin racemase
RA	4,902,717	T→C	7.1%	V196A (GTG→GCG) ‡	PP_4310 →	hydantoin racemase
RA	4,909,966	C→G	7.3%	intergenic (+314/+165)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,909,967	C→G	7.2%	intergenic (+315/+164)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,918,010	G→A	8.5%	V122I (GTC→ATC) ‡	PP_4328 →	hypothetical protein
RA	4,918,011	T→C	8.3%	V122A (GTC→GCC) ‡	PP_4328 →	hypothetical protein
RA	4,945,329	T→C	5.3%	intergenic (+644/+154)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,346	C→T	5.2%	intergenic (+661/+137)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,951,017	T→G	23.4%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,951,018	C→A	23.1%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,974,081	T→A	7.1%	K523M (AAG→ATG) ‡	flgK ←	flagellar hook‑associated protein FlgK
RA	4,974,082	T→A	7.0%	K523* (AAG→TAG) ‡	flgK ←	flagellar hook‑associated protein FlgK
JC	4,978,181	Δ9 bp	25.0%	coding (456‑464/696 nt)	flgH ←	flagellar L‑ring protein
RA	4,980,637	T→A	6.5%	intergenic (‑31/+40)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,980,638	T→A	6.5%	intergenic (‑32/+39)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,980,639	T→A	6.4%	intergenic (‑33/+38)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,986,096	C→G	5.6%	P97R (CCG→CGG)	flgA →	flagella basal body P‑ring formation protein
RA	5,013,335	G→C	5.1%	L36L (CTG→CTC)	PP_5678 →	hypothetical protein
RA	5,013,339	G→A	5.3%	A38T (GCG→ACG)	PP_5678 →	hypothetical protein
RA	5,030,796	A→G	10.5%	intergenic (+34/‑461)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,030,799	C→T	9.5%	intergenic (+37/‑458)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,077,270	G→A	6.0%	intergenic (+17/+91)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,282	G→T	6.6%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,285	A→C	7.1%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,079,174	T→A	7.8%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,177	T→A	7.7%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,090,930:1	+G	5.0%	coding (55/1020 nt)	astA‑II ←	arginine N‑succinyltransferase subunit alpha
RA	5,090,935	Δ1 bp	5.2%	coding (50/1020 nt)	astA‑II ←	arginine N‑succinyltransferase subunit alpha
RA	5,162,702	A→G	5.7%	intergenic (+177/+24)	PP_4544 → / ← PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
RA	5,165,415	Δ1 bp	6.3%	coding (2513/3906 nt)	hrpA ←	ATP‑dependent helicase HrpA
RA	5,165,419:1	+A	6.7%	coding (2509/3906 nt)	hrpA ←	ATP‑dependent helicase HrpA
RA	5,172,353	T→C	7.3%	T219A (ACC→GCC)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,360	G→A	7.7%	G216G (GGC→GGT)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,292	T→C	14.0%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,295	G→C	13.7%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,296	G→C	14.4%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,299	G→A	14.6%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,182,902	G→T	5.7%	G115V (GGC→GTC)	PP_4562 →	hypothetical protein
RA	5,194,935	T→G	13.5%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,936	C→A	13.3%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,212,534:1	+G	6.8%	intergenic (+50/+44)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,537	C→G	6.5%	intergenic (+53/+41)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,540	Δ1 bp	6.5%	intergenic (+56/+38)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,229,227	G→A	8.2%	intergenic (‑121/+55)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,239	Δ1 bp	9.7%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,243	C→G	10.1%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,246	C→G	11.6%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,249:1	+C	12.5%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,261	T→C	6.4%	intergenic (‑155/+21)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,239,932	G→A	7.8%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,937	T→C	8.3%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,253,931	G→A	8.3%	R251C (CGC→TGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,935	G→C	5.7%	F249L (TTC→TTG)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,939	T→C	5.6%	H248R (CAC→CGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,268,999	T→A	5.5%	intergenic (+19/+17)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,269,000	T→A	5.6%	intergenic (+20/+16)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,307,389	C→G	5.1%	intergenic (‑90/+96)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,391	G→A	5.0%	intergenic (‑92/+94)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,392	T→C	5.0%	intergenic (‑93/+93)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,307,394	C→G	5.2%	intergenic (‑95/+91)	recC ← / ← PP_5SG	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit/5S ribosomal RNA
RA	5,313,324	C→G	23.1%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,313,327	C→G	23.3%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,318,492	G→C	5.4%	I310M (ATC→ATG)	ilvI ←	acetohydroxybutanoate synthase/acetolactate synthase
RA	5,338,098	C→G	5.4%	intergenic (+57/‑227)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,101	C→G	6.3%	intergenic (+60/‑224)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,343,663	C→G	9.4%	I285M (ATC→ATG)	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,343,667	C→A	5.8%	L287M (CTG→ATG) ‡	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,343,668	T→G	5.6%	L287R (CTG→CGG) ‡	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,343,672	C→G	5.9%	A288A (GCC→GCG)	pgi‑II →	glucose 6‑phosphate isomerase
RA	5,344,509:1	+C	6.1%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,509:2	+T	6.1%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,515	C→G	8.6%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	8.8%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	9.0%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	8.9%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,352,025	G→T	5.8%	intergenic (‑230/+34)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,354,706	T→C	7.8%	G11G (GGA→GGG)  noncoding (17/97 nt)	rpsO ← PP_mr54 ←	30S ribosomal protein S15 S15 regulatory region
RA	5,354,719	G→A	7.6%	T7I (ACC→ATC)  noncoding (4/97 nt)	rpsO ← PP_mr54 ←	30S ribosomal protein S15 S15 regulatory region
RA	5,368,718	G→T	6.3%	R14S (CGC→AGC)	greA ←	transcription elongation factor GreA
RA	5,368,719	A→C	6.3%	A13A (GCT→GCG)	greA ←	transcription elongation factor GreA
RA	5,381,315	T→C	6.9%	intergenic (+32/+33)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,316	T→A	6.7%	intergenic (+33/+32)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,317	G→A	7.3%	intergenic (+34/+31)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,384,576	G→C	5.1%	G331A (GGC→GCC)	lldP →	L‑lactate permease
RA	5,398,523	T→C	5.9%	L496S (TTG→TCG)	hsdS →	type I restriction modification system specificity protein
RA	5,422,811	C→T	5.5%	intergenic (‑44/+106)	tesB ← / ← PP_4763	acyl‑CoA thioesterase II/acetyltransferase
RA	5,424,546	C→G	6.0%	L33V (CTG→GTG)	PP_4764 →	histone deacetylase family protein
RA	5,426,138	G→C	5.4%	W209S (TGG→TCG)	PP_4765 →	hypothetical protein
RA	5,426,143	G→C	5.4%	A211P (GCG→CCG)	PP_4765 →	hypothetical protein
RA	5,427,551	C→T	6.0%	A200A (GCG→GCA)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,440,059	T→C	5.9%	D272G (GAC→GGC)	amn ←	AMP nucleosidase
RA	5,440,062	G→A	5.4%	A271V (GCC→GTC)	amn ←	AMP nucleosidase
RA	5,451,660	A→G	5.6%	E48G (GAG→GGG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,664	C→G	5.9%	L49L (CTC→CTG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,668	C→T	5.5%	P51S (CCG→TCG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,453,177	G→A	27.7%	intergenic (+142/‑213)	lnt → / → PP_4791	apolipoprotein N‑acyltransferase/transposase
RA	5,458,940:1	+A	9.9%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,946	Δ1 bp	9.6%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,463,448	T→A	6.4%	intergenic (‑51/+48)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,463,449	T→A	6.4%	intergenic (‑52/+47)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,463,455	Δ1 bp	5.7%	intergenic (‑58/+41)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,473,481:1	+G	5.6%	coding (122/693 nt)	nadD ←	nicotinate‑nucleotide adenylyltransferase
RA	5,473,482:1	+G	5.6%	coding (121/693 nt)	nadD ←	nicotinate‑nucleotide adenylyltransferase
RA	5,513,398	A→G	5.7%	intergenic (+128/‑26)	urtD → / → urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
RA	5,529,408	C→G	5.8%	intergenic (‑574/+20)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,545,683	T→C	13.3%	intergenic (‑775/+102)	rpsF ← / ← rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,549,653	T→A	15.1%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,654	T→A	15.1%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,552,961	T→G	11.6%	intergenic (+576/+85)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,962	T→A	12.0%	intergenic (+577/+84)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,963	C→A	12.0%	intergenic (+578/+83)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,565,800	G→A	5.0%	H579H (CAC→CAT)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,805	A→T	5.3%	C578S (TGC→AGC)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,806	A→T	6.1%	A577A (GCT→GCA)	mutL ←	DNA mismatch repair protein MutL
RA	5,565,811	T→C	5.7%	M576V (ATG→GTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,464	T→A	5.9%	Q358L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,467	T→A	5.8%	Q357L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,577,398	C→G	5.0%	L357V (CTG→GTG)	PP_4906 →	hypothetical protein
RA	5,614,099	A→G	6.0%	intergenic (+30/+52)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,106	A→T	6.1%	intergenic (+37/+45)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,107	A→T	6.1%	intergenic (+38/+44)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,754	A→C	7.8%	I273M (ATT→ATG)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,757	G→T	7.5%	A272A (GCC→GCA)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,641,506	C→G	6.4%	S373C (TCC→TGC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,641,511	C→G	5.8%	Q375E (CAG→GAG)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,651,425	T→G	8.6%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,428	C→A	9.5%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,655,677:1	+A	38.8%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,682	T→G	39.7%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	37.9%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	32.8%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,660,233	G→T	11.3%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,236	A→C	11.6%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,685,956	G→C	6.8%	P331P (CCC→CCG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,958	G→C	7.3%	P331A (CCC→GCC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,965	G→C	5.6%	R328R (CGC→CGG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,967	G→C	6.0%	R328G (CGC→GGC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,737,655	G→C	15.6%	intergenic (‑154/+48)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,737,658	G→C	16.8%	intergenic (‑157/+45)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,740,523	T→G	13.6%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	12.5%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	12.5%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	11.4%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,741,946	C→T	5.0%	E88E (GAG→GAA)	PP_5039 ←	hypothetical protein
RA	5,743,446	G→A	15.1%	intergenic (‑223/+24)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,450	T→C	12.7%	intergenic (‑227/+20)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,460	C→T	8.7%	intergenic (‑237/+10)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,746,541	G→C	10.5%	intergenic (+32/+67)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,746,544	G→C	10.6%	intergenic (+35/+64)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,751,775	G→T	5.3%	intergenic (‑157/‑314)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,781	A→G	5.2%	intergenic (‑163/‑308)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,785	G→T	5.2%	intergenic (‑167/‑304)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,786	G→T	5.2%	intergenic (‑168/‑303)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,791	A→C	6.0%	intergenic (‑173/‑298)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,792	A→C	5.5%	intergenic (‑174/‑297)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,796	C→T	5.9%	intergenic (‑178/‑293)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,751,802	A→C	6.0%	intergenic (‑184/‑287)	thiI ← / → glnA	tRNA sulfurtransferase/glutamine synthetase
RA	5,753,541	T→G	14.3%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,753,542	C→A	13.9%	intergenic (+47/‑319)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,761,357	T→A	6.0%	L118Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,360	T→A	6.0%	L119Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,790,199	A→T	5.0%	intergenic (+22/+46)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,676	A→T	7.0%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,790,681	A→T	6.8%	intergenic (‑29/+28)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,797,363	A→C	5.0%	L198R (CTC→CGC)	gltB ←	L‑glutamate synthase subunit alpha
RA	5,798,249	C→T	6.0%	intergenic (‑294/+80)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,254	T→C	5.9%	intergenic (‑299/+75)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,257	G→A	6.1%	intergenic (‑302/+72)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,262	A→G	5.7%	intergenic (‑307/+67)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,808,040	A→G	8.2%	intergenic (+119/+36)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,808,041	T→C	8.1%	intergenic (+120/+35)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,808,042	G→A	8.2%	intergenic (+121/+34)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,808,043	C→T	8.1%	intergenic (+122/+33)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,815,587	C→T	6.4%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,592	G→T	6.4%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,595	A→C	6.4%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,600	A→G	6.4%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,816,909	A→G	10.7%	intergenic (+39/+90)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,845,651:1	+A	10.2%	intergenic (+20/‑82)	coaD → / → yfhL	phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein
RA	5,845,658	Δ1 bp	9.8%	intergenic (+27/‑75)	coaD → / → yfhL	phosphopantetheine adenylyltransferase/4Fe‑4S cluster‑containing protein
RA	5,846,014	A→G	5.1%	intergenic (+30/+61)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,019	G→A	8.1%	intergenic (+35/+56)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,028	T→C	10.9%	intergenic (+44/+47)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,846,033	C→T	9.3%	intergenic (+49/+42)	yfhL → / ← mutM	4Fe‑4S cluster‑containing protein/formamidopyrimidine‑DNA glycosylase
RA	5,851,227	T→A	5.9%	intergenic (+34/+34)	ilvD → / ← PP_5129	dihydroxy‑acid dehydratase/hypothetical protein
RA	5,866,752	G→T	5.7%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,866,753	A→C	5.6%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,890,847	A→C	11.1%	intergenic (+79/+41)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,848	A→T	10.6%	intergenic (+80/+40)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,890,849	G→T	10.0%	intergenic (+81/+39)	PP_5164 → / ← plpB	penicillin amidase family protein/NLPA lipoprotein
RA	5,897,826	A→G	9.4%	intergenic (‑170/+64)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,829	G→A	11.1%	intergenic (‑173/+61)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,834	C→G	10.4%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,835	G→C	10.4%	intergenic (‑179/+55)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,838	G→C	10.3%	intergenic (‑182/+52)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,839	C→G	9.7%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,844	T→C	9.5%	intergenic (‑188/+46)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,847	C→T	10.3%	intergenic (‑191/+43)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,903,220	G→T	12.9%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,221	A→C	12.5%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
JC	5,911,030	Δ6 bp	16.9%	coding (1179‑1184/1359 nt)	spuB ←	glutamylpolyamine synthetase
RA	5,911,613	T→G	5.4%	T201P (ACG→CCG)	spuB ←	glutamylpolyamine synthetase
RA	5,951,040	C→A	5.0%	R658L (CGT→CTT)	ppk ←	polyphosphate kinase
RA	5,951,043	T→G	5.9%	K657T (AAG→ACG)	ppk ←	polyphosphate kinase
RA	5,984,492	T→C	11.9%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,498	G→A	9.0%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,500	T→C	8.8%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,503	G→A	8.7%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,505	T→C	9.1%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,511	G→A	8.1%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,988,816	C→G	6.3%	intergenic (+54/‑492)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,819	C→G	6.1%	intergenic (+57/‑489)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,865	G→A	24.8%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	26.4%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	26.0%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	25.7%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	25.8%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	26.0%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	26.3%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	27.0%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	27.3%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	26.4%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	24.8%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	24.9%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	35.1%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	34.9%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	34.9%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	36.5%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	30.9%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,997,245:1	+G	36.3%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,250	Δ1 bp	31.5%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,005,024	T→C	5.9%	intergenic (+6/‑170)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,025	C→T	6.0%	intergenic (+7/‑169)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,029	G→C	5.8%	intergenic (+11/‑165)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,043	T→G	10.2%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,050	G→C	10.8%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,053	A→T	10.7%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,056	G→C	10.9%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,063	C→A	6.3%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,009,164	C→A	5.3%	intergenic (+5/+77)	norM → / ← PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
RA	6,020,607	G→A	5.7%	P33L (CCG→CTG)	dadA‑II ←	D‑amino acid:quinone oxidoreductase
RA	6,020,610	T→C	5.5%	Q32R (CAG→CGG)	dadA‑II ←	D‑amino acid:quinone oxidoreductase
RA	6,070,587	A→G	100%	G38G (GGT→GGC)	PP_5324 ←	two‑component system response regulator
RA	6,071,939	C→G	5.1%	L214F (TTG→TTC)	pstB‑II ←	phosphate ABC transporter ATP‑binding protein
RA	6,081,044	T→A	16.3%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,081,045	T→A	16.3%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
JC	6,098,315	Δ9 bp	65.3%	coding (822‑830/867 nt)	PP_5350 ←	RpiR family transcriptional regulator
RA	6,098,441	G→A	12.0%	T235I (ACC→ATC)	PP_5350 ←	RpiR family transcriptional regulator
RA	6,125,923	A→C	5.7%	Q221P (CAG→CCG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,127,218	C→G	8.1%	V241V (GTG→GTC) ‡	PP_5375 ←	LysR family transcriptional regulator
RA	6,127,219	A→T	7.7%	V241E (GTG→GAG) ‡	PP_5375 ←	LysR family transcriptional regulator
RA	6,127,220	C→G	7.9%	V241L (GTG→CTG) ‡	PP_5375 ←	LysR family transcriptional regulator
RA	6,129,226	C→T	5.6%	intergenic (+32/+35)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,229	A→T	5.5%	intergenic (+35/+32)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,232	A→G	5.4%	intergenic (+38/+29)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,132,598	A→G	9.0%	D437D (GAT→GAC)	copA‑II ←	copper resistance protein A
RA	6,174,765	A→C	5.1%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4808205	4808218	14	64 [0]	[0] 75	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	12243 =	125 (1.090)	8 (0.070)	7/230	NT	6.5%	coding (22/1104 nt)	recF	DNA replication/repair protein
	?	NC_002947	12275 =	111 (1.030)					coding (54/1104 nt)	recF	DNA replication/repair protein
*	?	NC_002947	= 86765	73 (0.640)	8 (0.080)	7/212	NT	9.3%	intergenic (‑48/+97)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	= 86824	92 (0.930)					intergenic (‑107/+38)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	90359 =	141 (1.230)	9 (0.090)	9/212	NT	7.3%	intergenic (+34/+88)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	90414 =	107 (1.080)					intergenic (+89/+33)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	174506 =	NA (NA)	4 (0.040)	4/232	NT	NA	noncoding (1304/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	174531 =	NA (NA)					noncoding (1329/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 176399	NA (NA)	47 (0.430) +CGAAA	13/234	NT	33.8%	intergenic (+43/‑420)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 182013	96 (0.840)					intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
*	?	NC_002947	= 196654	NA (NA)	3 (0.030)	3/230	NT	5.3%	coding (2160/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 196726	57 (0.500)					coding (2232/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	199507 =	97 (0.850)	6 (0.050)	5/234	NT	6.1%	coding (5013/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	201464 =	92 (0.840)					coding (6970/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	207792 =	NA (NA)	3 (0.030)	3/234	NT	100%	coding (13298/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	207820 =	0 (0.000)					coding (13326/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	214397 =	NA (NA)	7 (0.060)	5/244	NT	7.2%	coding (19903/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	217012 =	90 (0.790)					coding (22518/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	235331 =	116 (1.010)	17 (0.170)	13/212	NT	16.8%	intergenic (+28/+97)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235390 =	68 (0.680)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	277165 =	124 (1.080)	9 (0.090)	8/214	NT	7.7%	coding (3/1221 nt)	PP_0223	DszC family monooxygenase
	?	NC_002947	277234 =	107 (1.070)					intergenic (‑67/+30)	PP_0223/PP_0224	DszC family monooxygenase/DszC family monooxygenase
*	?	NC_002947	295685 =	101 (0.880)	13 (0.120)	9/226	NT	10.7%	intergenic (+32/+110)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	295774 =	123 (1.160)					intergenic (+121/+21)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 295713	111 (0.970)	10 (0.100)	8/216	NT	8.5%	intergenic (+60/+82)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	= 295744	117 (1.150)					intergenic (+91/+51)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 316022	67 (0.590)	8 (0.080)	8/208	NT	11.8%	intergenic (+34/+49)	cysQ/PP_0262	3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein
	?	NC_002947	= 316034	63 (0.650)					intergenic (+46/+37)	cysQ/PP_0262	3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein
*	?	NC_002947	= 337811	44 (0.380)	21 (0.240)	16/188	NT	37.5%	intergenic (‑58/+71)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
	?	NC_002947	= 337839	36 (0.410)					intergenic (‑86/+43)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
*	?	NC_002947	342893 =	125 (1.090)	8 (0.070)	8/228	NT	6.8%	intergenic (+21/+111)	gabP‑I/PP_5439	gamma‑aminobutyrate permease/hypothetical protein
	?	NC_002947	342923 =	103 (0.960)					intergenic (+51/+81)	gabP‑I/PP_5439	gamma‑aminobutyrate permease/hypothetical protein
*	?	NC_002947	353061 =	50 (0.440)	19 (0.220)	14/186	NT	41.3%	intergenic (+25/+93)	hisF/cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
	?	NC_002947	353133 =	16 (0.180)					intergenic (+97/+21)	hisF/cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
*	?	NC_002947	= 383390	120 (1.050)	10 (0.100)	7/218	NT	7.8%	intergenic (+47/‑136)	PP_0319/PP_0320	hypothetical protein/methyl‑accepting chemotaxis transducer
	?	NC_002947	= 383406	130 (1.270)					intergenic (+63/‑120)	PP_0319/PP_0320	hypothetical protein/methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 395240	133 (1.160)	8 (0.070)	8/232	NT	5.9%	coding (619/1200 nt)	fdhA	formaldehyde dehydrogenase
	?	NC_002947	= 395249	131 (1.200)					coding (628/1200 nt)	fdhA	formaldehyde dehydrogenase
*	?	NC_002947	401305 =	40 (0.350)	16 (0.140)	4/236	NT	19.2%	coding (888/1059 nt)	PP_0334	transposase
	?	NC_002947	3969005 =	96 (0.870)					coding (1089/1179 nt)	PP_3498	transposase
*	?	NC_002947	411634 =	113 (0.990)	6 (0.060)	5/232	NT	5.4%	coding (585/2934 nt)	glnE	glutamate‑ammonia‑ligase adenylyltransferase
	?	NC_002947	411666 =	104 (0.960)					coding (617/2934 nt)	glnE	glutamate‑ammonia‑ligase adenylyltransferase
*	?	NC_002947	413997 =	66 (0.580)	11 (0.120)	10/188	NT	24.0%	intergenic (+14/‑189)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	414083 =	19 (0.220)					intergenic (+100/‑103)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	414130 =	72 (0.630)	5 (0.050)	5/228	NT	6.0%	intergenic (+147/‑56)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	414167 =	89 (0.830)					intergenic (+184/‑19)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	445062 =	111 (0.970)	14 (0.160)	10/190	NT	16.1%	intergenic (+32/‑256)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	445155 =	60 (0.670)					intergenic (+125/‑163)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
*	?	NC_002947	478264 =	24 (0.210)	5 (0.060)	4/184	NT	17.8%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	28 (0.320)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 478293	26 (0.230)	5 (0.060)	5/184	NT	17.4%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478328	28 (0.320)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 499220	41 (0.360)	9 (0.100)	8/196	NT	21.4%	intergenic (+61/‑235)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
	?	NC_002947	= 499259	33 (0.360)					intergenic (+100/‑196)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	511926 =	100 (0.870)	6 (0.060)	6/222	NT	6.4%	intergenic (+63/‑85)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
	?	NC_002947	511966 =	84 (0.810)					intergenic (+103/‑45)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
*	?	NC_002947	514101 =	76 (0.660)	6 (0.060)	5/232	NT	8.1%	coding (986/1041 nt)	PP_0426	membrane protein
	?	NC_002947	514129 =	64 (0.590)					coding (958/1041 nt)	PP_0426	membrane protein
*	?	NC_002947	526315 =	NA (NA)	7 (0.060)	5/234	NT	NA	noncoding (1364/1522 nt)	PP_16SC	16S ribosomal RNA
	?	NC_002947	526337 =	NA (NA)					noncoding (1386/1522 nt)	PP_16SC	16S ribosomal RNA
*	?	NC_002947	= 528037	18 (0.160)	29 (0.270)	14/230	NT	63.1%	noncoding (1272/2902 nt)	PP_23SC	23S ribosomal RNA
	?	NC_002947	= 701130	NA (NA)					noncoding (1277/2902 nt)	PP_23SD	23S ribosomal RNA
*	?	NC_002947	= 582593	122 (1.070)	8 (0.070)	7/242	NT	6.1%	coding (456/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
	?	NC_002947	= 582623	125 (1.100)					coding (486/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
*	?	NC_002947	594786 =	122 (1.070)	8 (0.080)	6/214	NT	7.3%	intergenic (‑22/+105)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594847 =	95 (0.950)					intergenic (‑83/+44)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
*	?	NC_002947	= 596497	99 (0.860)	5 (0.050)	5/232	NT	5.4%	coding (370/711 nt)	PP_0507	ABC transporter ATP‑binding protein
	?	NC_002947	= 596543	82 (0.750)					coding (324/711 nt)	PP_0507	ABC transporter ATP‑binding protein
*	?	NC_002947	614281 =	28 (0.240)	8 (0.090)	6/200	NT	21.9%	intergenic (‑97/+81)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
	?	NC_002947	= 4675357	34 (0.360)					intergenic (+10/+94)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
*	?	NC_002947	= 623991	91 (0.790)	5 (0.050)	4/228	NT	5.3%	intergenic (‑308/+217)	PP_0536/PP_0537	hypothetical protein/transcriptional regulator
	?	NC_002947	= 623996	93 (0.870)					intergenic (‑313/+212)	PP_0536/PP_0537	hypothetical protein/transcriptional regulator
*	?	NC_002947	= 652785	88 (0.770)	56 (0.590)	38/204	NT	60.4%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	668980 =	89 (0.780)	5 (0.050)	5/236	NT	5.4%	coding (419/2355 nt)	pbpC	peptidoglycan glycosyltransferase
	?	NC_002947	669010 =	88 (0.790)					coding (449/2355 nt)	pbpC	peptidoglycan glycosyltransferase
*	?	NC_002947	= 678923	123 (1.070)	6 (0.050)	6/234	NT	5.0%	coding (98/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
	?	NC_002947	= 678952	109 (0.990)					coding (69/1374 nt)	PP_0581	3‑oxoacyl‑ACP reductase
*	?	NC_002947	= 706880	78 (0.680)	4 (0.040)	4/212	NT	5.1%	intergenic (+53/+193)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
	?	NC_002947	= 706965	80 (0.800)					intergenic (+138/+108)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
*	?	NC_002947	= 726912	101 (0.880)	6 (0.050) +TT	4/240	NT	6.2%	intergenic (‑156/+111)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	5571473 =	82 (0.720)					intergenic (+44/+97)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
*	?	NC_002947	733469 =	81 (0.710)	13 (0.120) +TGTTTCAAAA	12/224	NT	14.1%	intergenic (+3/‑2)	PP_t07/PP_t08	tRNA‑Asn/tRNA‑Pro
	?	NC_002947	733635 =	92 (0.800)					intergenic (+6/‑41)	PP_t09/PP_t10	tRNA‑Lys/tRNA‑Pro
*	?	NC_002947	= 741601	4 (0.030)	4 (0.040)	4/238	NT	50.6%	intergenic (+198/‑302)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741676	NA (NA)					intergenic (+273/‑227)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
*	?	NC_002947	= 741972	NA (NA)	4 (0.040)	4/236	NT	NA	coding (70/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 741999	NA (NA)					coding (97/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 745964	NA (NA)	9 (0.080)	7/234	NT	NA	coding (538/1533 nt)	PP_0637	transposase
	?	NC_002947	= 745974	NA (NA)					coding (528/1533 nt)	PP_0637	transposase
*	?	NC_002947	786595 =	98 (0.860)	5 (0.050)	5/222	NT	5.5%	intergenic (+14/‑291)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	786703 =	84 (0.810)					intergenic (+122/‑183)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
*	?	NC_002947	850908 =	103 (0.900)	11 (0.110)	7/208	NT	11.1%	intergenic (‑488/‑317)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
	?	NC_002947	851046 =	89 (0.910)					intergenic (‑626/‑179)	pcs/hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
*	?	NC_002947	= 867952	98 (0.860)	14 (0.140)	6/214	NT	13.9%	intergenic (+47/+130)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	= 867982	87 (0.870)					intergenic (+77/+100)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	874287 =	92 (0.800)	7 (0.070)	7/200	NT	10.9%	intergenic (+21/‑138)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
	?	NC_002947	874351 =	39 (0.420)					intergenic (+85/‑74)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
*	?	NC_002947	917692 =	149 (1.300)	14 (0.130)	12/222	NT	9.9%	intergenic (‑123/+76)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
	?	NC_002947	917754 =	119 (1.140)					intergenic (‑185/+14)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
*	?	NC_002947	958383 =	91 (0.790)	5 (0.050)	5/218	NT	5.7%	intergenic (+27/‑166)	ykgJ/PP_0820	ferredoxin/acetyltransferase
	?	NC_002947	958422 =	83 (0.810)					intergenic (+66/‑127)	ykgJ/PP_0820	ferredoxin/acetyltransferase
*	?	NC_002947	1083140 =	108 (0.940)	6 (0.060)	6/228	NT	6.0%	coding (2790/3822 nt)	PP_0938	hypothetical protein
	?	NC_002947	1083180 =	87 (0.810)					coding (2830/3822 nt)	PP_0938	hypothetical protein
*	?	NC_002947	1084995 =	110 (0.960)	8 (0.070)	7/232	NT	7.3%	coding (815/852 nt)	PP_0939	carbon‑nitrogen hydrolase family protein
	?	NC_002947	1085018 =	99 (0.910)					coding (838/852 nt)	PP_0939	carbon‑nitrogen hydrolase family protein
*	?	NC_002947	= 1088528	118 (1.030)	7 (0.060)	6/232	NT	5.9%	intergenic (+19/‑235)	pmbA/PP_0943	regulatory protease/hypothetical protein
	?	NC_002947	= 1088617	113 (1.040)					intergenic (+108/‑146)	pmbA/PP_0943	regulatory protease/hypothetical protein
*	?	NC_002947	= 1102893	86 (0.750)	9 (0.080)	6/228	NT	9.1%	intergenic (+27/‑91)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
	?	NC_002947	= 1102923	99 (0.930)					intergenic (+57/‑61)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
*	?	NC_002947	1114875 =	27 (0.240)	7 (0.080)	5/194	NT	26.2%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114951 =	18 (0.200)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	= 1114899	21 (0.180)	7 (0.080)	6/194	NT	28.7%	intergenic (‑88/+91)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	= 1114925	18 (0.200)					intergenic (‑114/+65)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1126598 =	50 (0.440)	10 (0.110)	8/202	NT	20.5%	intergenic (‑47/+103)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	1126656 =	36 (0.380)					intergenic (‑105/+45)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 1126618	36 (0.310)	11 (0.120)	8/202	NT	25.1%	intergenic (‑67/+83)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	= 1126634	36 (0.380)					intergenic (‑83/+67)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 1126676	52 (0.450)	4 (0.040)	4/226	NT	7.5%	intergenic (‑125/+25)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	= 1126683	51 (0.480)					intergenic (‑132/+18)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 1138550	122 (1.070)	6 (0.060)	6/216	NT	5.2%	intergenic (‑75/+90)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
	?	NC_002947	= 1138611	112 (1.110)					intergenic (‑136/+29)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
*	?	NC_002947	1149934 =	97 (0.850)	7 (0.070)	6/220	NT	8.0%	intergenic (‑175/+82)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	1149995 =	73 (0.710)					intergenic (‑236/+21)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	= 1177943	105 (0.920)	10 (0.090)	10/238	NT	8.8%	coding (820/1578 nt)	guaA	glutamine‑hydrolyzing GMP synthase
	?	NC_002947	= 1177970	104 (0.930)					coding (847/1578 nt)	guaA	glutamine‑hydrolyzing GMP synthase
*	?	NC_002947	1297203 =	NA (NA)	3 (0.030)	3/232	NT	NA	coding (385/1329 nt)	PP_1133	transposase
	?	NC_002947	1297232 =	NA (NA)					coding (414/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1298079	NA (NA)	7 (0.060)	5/234	NT	NA	coding (1261/1329 nt)	PP_1133	transposase
	?	NC_002947	= 1298095	NA (NA)					coding (1277/1329 nt)	PP_1133	transposase
*	?	NC_002947	1298272 =	NA (NA)	6 (0.050)	5/236	NT	NA	intergenic (+125/+304)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	1298318 =	NA (NA)					intergenic (+171/+258)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	= 1311736	78 (0.680)	5 (0.050)	5/226	NT	6.2%	intergenic (‑198/+80)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	= 1311773	79 (0.750)					intergenic (‑235/+43)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
*	?	NC_002947	1316166 =	91 (0.790)	8 (0.070)	9/230	NT	8.6%	intergenic (+35/‑66)	PP_1148/PP_mr15	hypothetical protein/P20 ncRNA
	?	NC_002947	1316184 =	84 (0.780)					intergenic (+53/‑48)	PP_1148/PP_mr15	hypothetical protein/P20 ncRNA
*	?	NC_002947	1351930 =	86 (0.750)	7 (0.060)	7/230	NT	8.0%	intergenic (‑140/+302)	nrdB/PP_1178	ribonucleoside‑diphosphate reductase subunit beta/hypothetical protein
	?	NC_002947	1351958 =	80 (0.740)					intergenic (‑168/+274)	nrdB/PP_1178	ribonucleoside‑diphosphate reductase subunit beta/hypothetical protein
*	?	NC_002947	1367887 =	81 (0.710)	7 (0.060)	6/230	NT	8.7%	coding (313/603 nt)	PP_1193	membrane protein
	?	NC_002947	1367919 =	70 (0.650)					coding (345/603 nt)	PP_1193	membrane protein
*	?	NC_002947	1392884 =	69 (0.600)	7 (0.090)	6/170	NT	14.9%	intergenic (+48/‑138)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
	?	NC_002947	1392984 =	32 (0.400)					intergenic (+148/‑38)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
*	?	NC_002947	1419553 =	15 (0.130)	9 (0.110)	7/180	NT	51.3%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	6 (0.070)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	14 (0.120)	14 (0.170)	12/180	NT	63.2%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	6 (0.070)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1426821	NA (NA)	18 (0.160)	10/234	NT	NA	coding (712/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426852	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	1436037 =	111 (0.970)	15 (0.140)	6/228	NT	12.1%	intergenic (‑67/+86)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	1436090 =	114 (1.070)					intergenic (‑120/+33)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	= 1436044	114 (1.000)	10 (0.090)	8/228	NT	8.3%	intergenic (‑74/+79)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	= 1436081	114 (1.070)					intergenic (‑111/+42)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	1447657 =	146 (1.280)	7 (0.060)	6/234	NT	5.4%	coding (1748/2178 nt)	PP_1264	fusaric acid resistance protein
	?	NC_002947	1447714 =	106 (0.970)					coding (1805/2178 nt)	PP_1264	fusaric acid resistance protein
*	?	NC_002947	= 1468069	113 (0.990)	7 (0.060)	6/232	NT	6.1%	coding (630/1479 nt)	algE	alginate production protein AlgE
	?	NC_002947	= 1468077	109 (1.000)					coding (622/1479 nt)	algE	alginate production protein AlgE
*	?	NC_002947	1487013 =	15 (0.130)	7 (0.080)	7/184	NT	43.3%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	7 (0.080)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	13 (0.110)	11 (0.130)	8/184	NT	56.7%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	7 (0.080)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1492317	87 (0.760)	7 (0.070)	6/228	NT	7.4%	intergenic (+71/+24)	cysNC/imm	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase/colicin‑E7 immunity protein
	?	NC_002947	= 1492325	93 (0.870)					intergenic (+79/+16)	cysNC/imm	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase/colicin‑E7 immunity protein
*	?	NC_002947	= 1499465	36 (0.310)	11 (0.120)	9/198	NT	21.7%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	50 (0.540)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1560030 =	115 (1.000)	6 (0.060)	6/232	NT	5.3%	coding (60/1122 nt)	PP_1370	group 1 family glycosyl transferase
	?	NC_002947	1560054 =	104 (0.960)					coding (36/1122 nt)	PP_1370	group 1 family glycosyl transferase
*	?	NC_002947	1570443 =	58 (0.510)	8 (0.090)	8/192	NT	20.9%	intergenic (+9/‑179)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
	?	NC_002947	1570521 =	15 (0.170)					intergenic (+87/‑101)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
*	?	NC_002947	1581603 =	125 (1.090)	7 (0.060)	6/234	NT	5.7%	coding (994/1155 nt)	ttgA	efflux pump periplasmic linker TtgA
	?	NC_002947	1581631 =	110 (1.000)					coding (966/1155 nt)	ttgA	efflux pump periplasmic linker TtgA
*	?	NC_002947	= 1597807	122 (1.070)	10 (0.090)	7/240	NT	8.0%	coding (997/1758 nt)	dctB	C4‑dicarboxylate transport sensor protein
	?	NC_002947	= 1597838	109 (0.970)					coding (966/1758 nt)	dctB	C4‑dicarboxylate transport sensor protein
*	?	NC_002947	1621649 =	130 (1.140)	7 (0.060)	6/232	NT	5.4%	coding (521/1392 nt)	PP_1421	sensor histidine kinase TctE
	?	NC_002947	1621671 =	123 (1.130)					coding (543/1392 nt)	PP_1421	sensor histidine kinase TctE
*	?	NC_002947	= 1622544	72 (0.630)	13 (0.130)	9/208	NT	16.6%	intergenic (+24/+42)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein
	?	NC_002947	= 1622558	69 (0.710)					intergenic (+38/+28)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein
*	?	NC_002947	1653990 =	102 (0.890)	7 (0.060)	6/234	NT	6.6%	coding (2821/4527 nt)	PP_1449	hypothetical protein
	?	NC_002947	1654020 =	100 (0.910)					coding (2791/4527 nt)	PP_1449	hypothetical protein
*	?	NC_002947	= 1697128	109 (0.950)	8 (0.070)	8/230	NT	6.8%	coding (1119/2289 nt)	PP_1492	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 1697140	117 (1.080)					coding (1131/2289 nt)	PP_1492	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	1731205 =	25 (0.220)	12 (0.140)	11/188	NT	39.8%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	17 (0.190)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1731232	20 (0.170)	8 (0.090)	6/188	NT	33.1%	intergenic (‑103/+88)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731268	17 (0.190)					intergenic (‑139/+52)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1750314	97 (0.850)	8 (0.080)	7/218	NT	8.0%	intergenic (‑37/‑52)	PP_1549/PP_1550	Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator
	?	NC_002947	= 1750325	97 (0.950)					intergenic (‑48/‑41)	PP_1549/PP_1550	Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator
*	?	NC_002947	= 1768942	93 (0.810)	5 (0.050)	5/232	NT	5.1%	coding (25/381 nt)	PP_5475	hypothetical protein
	?	NC_002947	= 1768952	97 (0.890)					coding (35/381 nt)	PP_5475	hypothetical protein
*	?	NC_002947	1780109 =	7 (0.060)	24 (0.250)	17/206	NT	70.7%	intergenic (+26/+80)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1780171 =	14 (0.140)					intergenic (+88/+18)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	= 1780127	7 (0.060)	22 (0.230)	9/206	NT	68.8%	intergenic (+44/+62)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	= 1780151	14 (0.140)					intergenic (+68/+38)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	1798642 =	145 (1.270)	8 (0.070)	8/234	NT	5.6%	coding (523/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798676 =	132 (1.200)					coding (557/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	= 1799915	76 (0.660)	11 (0.120)	8/198	NT	13.9%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	75 (0.810)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	1800899 =	119 (1.040)	8 (0.070)	6/236	NT	6.3%	coding (841/3525 nt)	dnaEA	DNA polymerase III subunit alpha
	?	NC_002947	1800919 =	122 (1.100)					coding (861/3525 nt)	dnaEA	DNA polymerase III subunit alpha
*	?	NC_002947	= 1821027	0 (0.000)	4 (0.040)	4/234	NT	100%	coding (748/1422 nt)	PP_1624	group II intron‑encoding maturase
	?	NC_002947	= 2070376	NA (NA)					coding (707/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	1842839 =	94 (0.820)	6 (0.060)	6/226	NT	6.7%	coding (1997/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	1842873 =	80 (0.750)					coding (1963/2754 nt)	gacS	sensor protein GacS
*	?	NC_002947	1850914 =	100 (0.870)	7 (0.070)	6/228	NT	7.3%	intergenic (+54/‑43)	rlmD/relA	23S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD/ATP:GTP 3'‑pyrophosphotransferase
	?	NC_002947	1850937 =	84 (0.790)					intergenic (+77/‑20)	rlmD/relA	23S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD/ATP:GTP 3'‑pyrophosphotransferase
*	?	NC_002947	= 1899258	121 (1.060)	7 (0.070)	6/224	NT	7.4%	intergenic (+286/‑234)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899320	64 (0.610)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1899260 =	121 (1.060)	20 (0.200)	13/214	NT	18.6%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	69 (0.690)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1899413 =	106 (0.930)	9 (0.090)	7/224	NT	8.0%	intergenic (+441/‑79)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899467 =	111 (1.060)					intergenic (+495/‑25)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1906724 =	64 (0.560)	5 (0.060)	4/192	NT	11.6%	intergenic (+22/+106)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1906818 =	26 (0.290)					intergenic (+116/+12)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	1919930 =	122 (1.070)	6 (0.060)	5/230	NT	5.4%	coding (569/2115 nt)	prc	tail‑specific protease Prc
	?	NC_002947	1919965 =	97 (0.900)					coding (534/2115 nt)	prc	tail‑specific protease Prc
*	?	NC_002947	1921404 =	101 (0.880)	7 (0.060)	7/232	NT	6.9%	coding (800/963 nt)	PP_1720	alcohol dehydrogenase
	?	NC_002947	1921438 =	93 (0.850)					coding (834/963 nt)	PP_1720	alcohol dehydrogenase
*	?	NC_002947	= 1947843	66 (0.580)	7 (0.080)	7/192	NT	9.9%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	= 1947910	76 (0.840)					intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	1967188 =	26 (0.230)	17 (0.200)	13/178	NT	51.5%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	13 (0.160)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	25 (0.220)	12 (0.140)	8/178	NT	43.4%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	13 (0.160)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1970782	63 (0.550)	19 (0.200)	12/204	NT	26.1%	intergenic (+33/‑233)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
	?	NC_002947	= 1970844	55 (0.570)					intergenic (+95/‑171)	mtnA/PP_mr25	methylthioribose‑1‑phosphate isomerase/gyrA regulatory region
*	?	NC_002947	2033772 =	14 (0.120)	12 (0.110)	10/234	NT	39.1%	coding (1210/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
	?	NC_002947	2033794 =	24 (0.220)					coding (1232/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
*	?	NC_002947	2045058 =	94 (0.820)	6 (0.050)	5/242	NT	5.6%	coding (229/1941 nt)	PP_1819	methyl‑accepting chemotaxis transducer
	?	NC_002947	2045091 =	109 (0.960)					coding (262/1941 nt)	PP_1819	methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 2048853	76 (0.660)	8 (0.080)	7/210	NT	10.2%	intergenic (+49/+90)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	= 2048910	76 (0.770)					intergenic (+106/+33)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	2050602 =	27 (0.240)	5 (0.060)	5/170	NT	19.7%	intergenic (‑52/+123)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	2050712 =	22 (0.280)					intergenic (‑162/+13)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2050638	23 (0.200)	4 (0.050)	3/170	NT	17.4%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	22 (0.280)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2056021	113 (0.990)	11 (0.110)	8/212	NT	9.5%	intergenic (+27/‑116)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	= 2056095	112 (1.130)					intergenic (+101/‑42)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	= 2057836	82 (0.720)	13 (0.110)	6/242	NT	15.6%	intergenic (+9/+119)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2057936	59 (0.520)					intergenic (+109/+19)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	2057843 =	86 (0.750)	9 (0.100)	9/196	NT	12.4%	intergenic (+16/+112)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	2057931 =	58 (0.630)					intergenic (+104/+24)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2063227	50 (0.440)	15 (0.160)	12/194	NT	24.8%	intergenic (+41/‑166)	PP_1838/PP_1839	membrane protein/hypothetical protein
	?	NC_002947	= 2063271	51 (0.560)					intergenic (+85/‑122)	PP_1838/PP_1839	membrane protein/hypothetical protein
*	?	NC_002947	2076413 =	84 (0.730)	6 (0.060)	6/224	NT	6.9%	intergenic (+7/+39)	PP_5479/PP_1852	LysR family transcriptional regulator/enoyl‑ACP reductase
	?	NC_002947	2076442 =	84 (0.800)					intergenic (+36/+10)	PP_5479/PP_1852	LysR family transcriptional regulator/enoyl‑ACP reductase
*	?	NC_002947	= 2078299	60 (0.520)	14 (0.140)	12/210	NT	21.6%	intergenic (+41/+74)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 2078346	50 (0.510)					intergenic (+88/+27)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 2085534	98 (0.860)	9 (0.080)	3/226	NT	9.7%	intergenic (+200/‑395)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	= 2412937	76 (0.720)					intergenic (+158/‑263)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
*	?	NC_002947	= 2085534	98 (0.860)	13 (0.120)	8/228	NT	13.6%	intergenic (+200/‑395)	PP_1864/PP_1865	hypothetical protein/transposase
	?	NC_002947	= 4908088	73 (0.680)					intergenic (‑19/‑263)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	2086774 =	NA (NA)	7 (0.070)	7/228	NT	NA	coding (846/1302 nt)	PP_1865	transposase
	?	NC_002947	2086805 =	NA (NA)					coding (877/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2087780	92 (0.800)	6 (0.060)	3/228	NT	5.7%	intergenic (+550/+368)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
	?	NC_002947	= 4022368	113 (1.060)					intergenic (‑19/+649)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	= 2100025	42 (0.370)	27 (0.290)	16/198	NT	38.8%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2100074	51 (0.550)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2145840	142 (1.240)	8 (0.070)	5/230	NT	5.5%	coding (151/465 nt)	etp	phosphotyrosine‑protein phosphatase
	?	NC_002947	= 2145863	140 (1.300)					coding (174/465 nt)	etp	phosphotyrosine‑protein phosphatase
*	?	NC_002947	2159309 =	132 (1.150)	8 (0.080)	7/226	NT	6.7%	coding (248/1245 nt)	fabF	beta‑ketoacyl‑ACP synthase II
	?	NC_002947	2159337 =	99 (0.930)					coding (276/1245 nt)	fabF	beta‑ketoacyl‑ACP synthase II
*	?	NC_002947	2162588 =	114 (1.000)	8 (0.070)	6/232	NT	7.1%	intergenic (+227/‑595)	yceG/PP_5482	septation protein/hypothetical protein
	?	NC_002947	2162638 =	101 (0.930)					intergenic (+277/‑545)	yceG/PP_5482	septation protein/hypothetical protein
*	?	NC_002947	= 2236977	65 (0.570)	8 (0.080)	8/212	NT	13.3%	intergenic (+29/+99)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
	?	NC_002947	= 2237036	48 (0.480)					intergenic (+88/+40)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
*	?	NC_002947	2236979 =	65 (0.570)	9 (0.090)	8/224	NT	14.6%	intergenic (+31/+97)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
	?	NC_002947	2237036 =	46 (0.440)					intergenic (+88/+40)	uvrB/PP_1975	uvrABC excinuclease protein B/EmrB/QacA family drug resistance transporter
*	?	NC_002947	= 2242703	123 (1.070)	9 (0.080)	9/240	NT	6.9%	coding (233/540 nt)	PP_1978	TetR family transcriptional regulator
	?	NC_002947	= 2242735	121 (1.070)					coding (265/540 nt)	PP_1978	TetR family transcriptional regulator
*	?	NC_002947	2262205 =	82 (0.720)	7 (0.070)	6/228	NT	8.9%	intergenic (+14/‑124)	fimV/truA	motility protein FimV/tRNA pseudouridine (38‑40)synthase
	?	NC_002947	2262242 =	66 (0.620)					intergenic (+51/‑87)	fimV/truA	motility protein FimV/tRNA pseudouridine (38‑40)synthase
*	?	NC_002947	= 2280773	97 (0.850)	6 (0.050)	5/236	NT	5.8%	coding (1870/2082 nt)	fadH	2,4‑dienoyl‑CoA reductase
	?	NC_002947	= 2280792	100 (0.900)					coding (1889/2082 nt)	fadH	2,4‑dienoyl‑CoA reductase
*	?	NC_002947	2282315 =	133 (1.160)	11 (0.100)	11/238	NT	7.8%	coding (337/546 nt)	PP_2010	cytochrome b561
	?	NC_002947	2282354 =	130 (1.160)					coding (298/546 nt)	PP_2010	cytochrome b561
*	?	NC_002947	= 2295816	83 (0.730)	6 (0.050)	6/234	NT	7.6%	intergenic (+19/+114)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2295903	66 (0.600)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2295818 =	81 (0.710)	9 (0.100)	6/196	NT	12.5%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	61 (0.660)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2301552	72 (0.630)	11 (0.110)	8/216	NT	13.4%	intergenic (‑153/‑178)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	= 2301609	78 (0.770)					intergenic (‑210/‑121)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	= 2310565	115 (1.000)	12 (0.110)	10/242	NT	9.3%	coding (273/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	= 2310624	120 (1.060)					coding (332/1311 nt)	PP_2033	hypothetical protein
*	?	NC_002947	2334328 =	125 (1.090)	7 (0.060)	4/230	NT	5.3%	intergenic (+32/+48)	fadA/PP_2052	3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
	?	NC_002947	2334366 =	132 (1.220)					intergenic (+70/+10)	fadA/PP_2052	3‑ketoacyl‑CoA thiolase/bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
*	?	NC_002947	= 2354594	125 (1.090)	6 (0.060)	4/228	NT	5.1%	intergenic (‑20/+38)	PP_2068/PP_2069	multidrug MFS transporter membrane fusion protein/multidrug MFS transporter outer membrane protein
	?	NC_002947	3531425 =	106 (0.990)					intergenic (+97/+86)	dnaEB/yeaE	error‑prone DNA polymerase/methylglyoxal reductase
*	?	NC_002947	2356702 =	97 (0.850)	8 (0.080)	7/218	NT	8.5%	coding (163/711 nt)	PP_2070	AraC family transcriptional regulator
	?	NC_002947	2356737 =	85 (0.830)					coding (128/711 nt)	PP_2070	AraC family transcriptional regulator
*	?	NC_002947	2422987 =	101 (0.880)	5 (0.050)	3/234	NT	5.1%	coding (1232/1248 nt)	PP_2124	glycosyl transferase
	?	NC_002947	2423036 =	90 (0.820)					coding (1183/1248 nt)	PP_2124	glycosyl transferase
*	?	NC_002947	2429928 =	57 (0.500)	19 (0.230)	14/178	NT	43.4%	intergenic (+15/+98)	PP_2129/PP_2130	hypothetical protein/lytic transglycosylase
	?	NC_002947	2430009 =	8 (0.100)					intergenic (+96/+17)	PP_2129/PP_2130	hypothetical protein/lytic transglycosylase
*	?	NC_002947	2434120 =	130 (1.140)	13 (0.130)	10/218	NT	10.2%	intergenic (+20/+88)	uup/PP_2132	ABC transporter ATP‑binding protein/universal stress protein
	?	NC_002947	2434194 =	113 (1.100)					intergenic (+94/+14)	uup/PP_2132	ABC transporter ATP‑binding protein/universal stress protein
*	?	NC_002947	2454039 =	92 (0.800)	5 (0.050)	5/232	NT	5.5%	coding (1123/3450 nt)	mfd	transcription‑repair coupling factor
	?	NC_002947	2454084 =	85 (0.780)					coding (1078/3450 nt)	mfd	transcription‑repair coupling factor
*	?	NC_002947	2458128 =	97 (0.850)	7 (0.060)	7/240	NT	7.1%	intergenic (+157/‑48)	PP_2150/sthA	thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase
	?	NC_002947	2458159 =	87 (0.770)					intergenic (+188/‑17)	PP_2150/sthA	thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase
*	?	NC_002947	= 2472183	54 (0.470)	11 (0.140)	6/166	NT	20.2%	intergenic (+44/+105)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	= 2472229	50 (0.640)					intergenic (+90/+59)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	= 2474183	28 (0.240)	11 (0.120)	10/198	NT	24.5%	intergenic (‑45/+135)	PP_2167/tal	PhoD‑like phosphatase/transaldolase
	?	NC_002947	= 2474205	45 (0.480)					intergenic (‑67/+113)	PP_2167/tal	PhoD‑like phosphatase/transaldolase
*	?	NC_002947	2521089 =	106 (0.930)	9 (0.080)	9/228	NT	9.0%	coding (2297/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
	?	NC_002947	2521117 =	83 (0.780)					coding (2325/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
*	?	NC_002947	2530824 =	33 (0.290)	16 (0.150)	9/228	NT	16.8%	coding (20/369 nt)	PP_2219	hypothetical protein
	?	NC_002947	= 4022407	128 (1.200)					intergenic (‑58/+610)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	2567688 =	88 (0.770)	6 (0.050)	6/234	NT	6.7%	coding (283/879 nt)	PP_2250	LysR family transcriptional regulator
	?	NC_002947	2567703 =	82 (0.750)					coding (268/879 nt)	PP_2250	LysR family transcriptional regulator
*	?	NC_002947	2577157 =	100 (0.870)	9 (0.090)	8/222	NT	9.9%	coding (1281/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	2577227 =	73 (0.700)					coding (1211/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 2577167	104 (0.910)	7 (0.070)	7/222	NT	7.7%	coding (1271/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 2577215	73 (0.700)					coding (1223/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	2582462 =	111 (0.970)	6 (0.050)	7/236	NT	5.5%	coding (771/801 nt)	PP_2263	sugar ABC transporter permease
	?	NC_002947	2582485 =	97 (0.880)					coding (794/801 nt)	PP_2263	sugar ABC transporter permease
*	?	NC_002947	= 2720805	104 (0.910)	6 (0.060)	5/224	NT	5.6%	intergenic (+16/+34)	PP_2380/PP_2381	hypothetical protein/hypothetical protein
	?	NC_002947	= 2720810	107 (1.020)					intergenic (+21/+29)	PP_2380/PP_2381	hypothetical protein/hypothetical protein
*	?	NC_002947	2793739 =	38 (0.330)	4 (0.040)	4/240	NT	14.4%	intergenic (+5/+122)	PP_2445/PP_2446	membrane protein/hypothetical protein
	?	NC_002947	2793764 =	10 (0.090)					intergenic (+30/+97)	PP_2445/PP_2446	membrane protein/hypothetical protein
*	?	NC_002947	= 2793794	18 (0.160)	15 (0.170)	13/188	NT	46.2%	intergenic (+60/+67)	PP_2445/PP_2446	membrane protein/hypothetical protein
	?	NC_002947	= 2793804	21 (0.240)					intergenic (+70/+57)	PP_2445/PP_2446	membrane protein/hypothetical protein
*	?	NC_002947	2794953 =	84 (0.730)	6 (0.060)	6/218	NT	6.7%	intergenic (+18/+94)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
	?	NC_002947	2795030 =	93 (0.910)					intergenic (+95/+17)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
*	?	NC_002947	= 2794965	84 (0.730)	19 (0.190)	10/218	NT	18.4%	intergenic (+30/+82)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
	?	NC_002947	= 2795016	93 (0.910)					intergenic (+81/+31)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
*	?	NC_002947	2813357 =	103 (0.900)	5 (0.050)	5/232	NT	5.1%	coding (499/1017 nt)	pheS	phenylalanine‑‑tRNA ligase subunit alpha
	?	NC_002947	2813386 =	90 (0.830)					coding (528/1017 nt)	pheS	phenylalanine‑‑tRNA ligase subunit alpha
*	?	NC_002947	2844707 =	95 (0.830)	6 (0.060)	6/222	NT	6.5%	intergenic (‑24/+56)	PP_2495/PP_2496	hypothetical protein/hypothetical protein
	?	NC_002947	2844741 =	87 (0.840)					intergenic (‑58/+22)	PP_2495/PP_2496	hypothetical protein/hypothetical protein
*	?	NC_002947	= 2864039	106 (0.930)	7 (0.070)	5/224	NT	6.3%	coding (1056/1194 nt)	gllR	HTH‑type transcriptional regulator GalR
	?	NC_002947	= 2864053	110 (1.050)					coding (1070/1194 nt)	gllR	HTH‑type transcriptional regulator GalR
*	?	NC_002947	= 2887594	87 (0.760)	9 (0.090)	9/220	NT	10.1%	coding (1118/1425 nt)	PP_2542	GntR family transcriptional regulator
	?	NC_002947	= 2887609	82 (0.790)					coding (1103/1425 nt)	PP_2542	GntR family transcriptional regulator
*	?	NC_002947	2900029 =	102 (0.890)	6 (0.060)	6/228	NT	6.2%	coding (644/1374 nt)	PP_2553	MFS transporter
	?	NC_002947	2900054 =	86 (0.800)					coding (619/1374 nt)	PP_2553	MFS transporter
*	?	NC_002947	= 2922852	103 (0.900)	7 (0.070)	6/228	NT	6.3%	coding (2444/2772 nt)	PP_2563	antibiotic biosynthesis protein
	?	NC_002947	= 2922862	112 (1.050)					coding (2434/2772 nt)	PP_2563	antibiotic biosynthesis protein
*	?	NC_002947	= 2948858	88 (0.770)	5 (0.050)	5/234	NT	5.6%	coding (267/591 nt)	PP_2582	heme oxygenase
	?	NC_002947	= 2948871	85 (0.770)					coding (254/591 nt)	PP_2582	heme oxygenase
*	?	NC_002947	= 2954698	42 (0.370)	16 (0.170)	10/196	NT	31.1%	intergenic (‑158/‑123)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
	?	NC_002947	= 2954716	37 (0.400)					intergenic (‑176/‑105)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
*	?	NC_002947	2957115 =	127 (1.110)	11 (0.110)	6/214	NT	9.8%	intergenic (+27/‑169)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957202 =	92 (0.920)					intergenic (+114/‑82)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	2958817 =	86 (0.750)	12 (0.120)	13/212	NT	15.9%	intergenic (+40/+102)	PP_2589/PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
	?	NC_002947	2958876 =	52 (0.520)					intergenic (+99/+43)	PP_2589/PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
*	?	NC_002947	2962294 =	70 (0.610)	6 (0.050)	5/234	NT	7.9%	coding (3/1023 nt) coding (743/777 nt)	fatB PP_2592	ferric anguibactin‑binding protein ferric siderophore ABC transporter ATP‑binding protein
	?	NC_002947	2962317 =	73 (0.660)					coding (720/777 nt)	PP_2592	ferric siderophore ABC transporter ATP‑binding protein
*	?	NC_002947	= 2975521	82 (0.720)	10 (0.090)	9/230	NT	11.3%	coding (496/1053 nt)	ligC	4‑carboxy‑2‑hydroxymuconate‑6‑semialdehyde dehydrogenase
	?	NC_002947	= 2975528	80 (0.740)					coding (503/1053 nt)	ligC	4‑carboxy‑2‑hydroxymuconate‑6‑semialdehyde dehydrogenase
*	?	NC_002947	2980458 =	110 (0.960)	6 (0.050)	4/236	NT	5.6%	coding (232/321 nt)	PP_2606	hypothetical protein
	?	NC_002947	2980493 =	97 (0.880)					coding (197/321 nt)	PP_2606	hypothetical protein
*	?	NC_002947	2987433 =	NA (NA)	4 (0.040)	4/230	NT	NA	coding (1009/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2987492 =	NA (NA)					coding (950/2991 nt)	PP_2612	membrane protein
*	?	NC_002947	= 2991565	114 (1.000)	8 (0.070)	7/230	NT	7.0%	intergenic (‑43/+32)	vgrG‑I/hcpC‑I	type VI secretion system protein/hemolysin‑coregulated protein
	?	NC_002947	4611105 =	105 (0.970)					intergenic (+21/‑2086)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
*	?	NC_002947	= 3045915	93 (0.810)	10 (0.090)	9/240	NT	10.1%	coding (449/894 nt)	pstA	phosphate ABC transporter permease
	?	NC_002947	= 3045948	86 (0.760)					coding (482/894 nt)	pstA	phosphate ABC transporter permease
*	?	NC_002947	3068857 =	81 (0.710)	5 (0.050)	5/228	NT	5.8%	intergenic (+65/‑98)	qedH‑II/aldB‑II	quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase
	?	NC_002947	3068898 =	88 (0.820)					intergenic (+106/‑57)	qedH‑II/aldB‑II	quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase
*	?	NC_002947	= 3070499	115 (1.000)	11 (0.100)	8/230	NT	9.5%	intergenic (+24/‑330)	aldB‑II/pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
	?	NC_002947	= 3070561	101 (0.940)					intergenic (+86/‑268)	aldB‑II/pqqD‑II	aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
*	?	NC_002947	3142930 =	97 (0.850)	6 (0.060)	6/224	NT	6.9%	coding (836/1029 nt)	PP_2758	ribose ABC transporter substrate‑binding protein
	?	NC_002947	3142976 =	72 (0.690)					coding (882/1029 nt)	PP_2758	ribose ABC transporter substrate‑binding protein
*	?	NC_002947	3151447 =	116 (1.010)	7 (0.060)	7/234	NT	5.9%	coding (368/834 nt)	PP_2767	ABC transporter ATP‑binding protein
	?	NC_002947	3151478 =	112 (1.020)					coding (399/834 nt)	PP_2767	ABC transporter ATP‑binding protein
*	?	NC_002947	= 3166465	107 (0.930)	10 (0.090)	10/232	NT	8.1%	coding (854/1299 nt)	PP_2780	3‑oxoacyl‑ACP synthase
	?	NC_002947	= 3166487	126 (1.160)					coding (876/1299 nt)	PP_2780	3‑oxoacyl‑ACP synthase
*	?	NC_002947	3191219 =	101 (0.880)	8 (0.070)	8/228	NT	8.1%	coding (823/1254 nt)	PP_2800	diaminobutyrate‑2‑oxoglutarate transaminase
	?	NC_002947	3191246 =	87 (0.810)					coding (796/1254 nt)	PP_2800	diaminobutyrate‑2‑oxoglutarate transaminase
*	?	NC_002947	3211691 =	100 (0.870)	7 (0.060)	5/230	NT	7.1%	coding (685/1254 nt)	PP_2815	hypothetical protein
	?	NC_002947	3211718 =	89 (0.820)					coding (712/1254 nt)	PP_2815	hypothetical protein
*	?	NC_002947	= 3251535	114 (1.000)	8 (0.070)	6/242	NT	6.6%	coding (332/675 nt)	ureF	urease accessory protein
	?	NC_002947	= 3251577	114 (1.000)					coding (374/675 nt)	ureF	urease accessory protein
*	?	NC_002947	3322429 =	90 (0.790)	6 (0.050)	6/234	NT	6.3%	coding (386/972 nt)	PP_2922	urea amidolyase‑like protein
	?	NC_002947	3322457 =	92 (0.840)					coding (414/972 nt)	PP_2922	urea amidolyase‑like protein
*	?	NC_002947	3339160 =	91 (0.790)	7 (0.070)	6/200	NT	9.7%	intergenic (‑119/+124)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	3339248 =	56 (0.600)					intergenic (‑207/+36)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
*	?	NC_002947	= 3340972	89 (0.780)	5 (0.050)	5/230	NT	5.2%	coding (351/420 nt)	PP_2937	integrase
	?	NC_002947	= 3340986	97 (0.900)					coding (337/420 nt)	PP_2937	integrase
*	?	NC_002947	3352188 =	117 (1.020)	8 (0.070)	7/232	NT	7.6%	intergenic (+35/+107)	PP_2947/PP_2948	transcriptional regulator MvaT/GntR family transcriptional regulator
	?	NC_002947	3352244 =	83 (0.760)					intergenic (+91/+51)	PP_2947/PP_2948	transcriptional regulator MvaT/GntR family transcriptional regulator
*	?	NC_002947	3477615 =	103 (0.900)	6 (0.050)	6/238	NT	5.4%	coding (394/1086 nt)	PP_3088	hypothetical protein
	?	NC_002947	3477648 =	110 (0.990)					coding (361/1086 nt)	PP_3088	hypothetical protein
*	?	NC_002947	= 3522759	107 (0.930)	6 (0.060)	5/214	NT	5.8%	intergenic (+503/‑194)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	= 3522816	100 (1.000)					intergenic (+560/‑137)	PP_5584/PP_3113	hypothetical protein/transposase
*	?	NC_002947	3524178 =	NA (NA)	4 (0.040)	4/234	NT	NA	coding (848/1533 nt)	PP_3114	transposase
	?	NC_002947	3524214 =	NA (NA)					coding (884/1533 nt)	PP_3114	transposase
*	?	NC_002947	= 3542087	129 (1.130)	7 (0.060)	6/230	NT	5.4%	coding (679/966 nt)	galE	UDP‑glucose 4‑epimerase
	?	NC_002947	= 3542107	123 (1.140)					coding (659/966 nt)	galE	UDP‑glucose 4‑epimerase
*	?	NC_002947	3569122 =	94 (0.820)	5 (0.050)	5/230	NT	5.3%	coding (1636/1998 nt)	PP_3150	hypothetical protein
	?	NC_002947	3569158 =	89 (0.820)					coding (1672/1998 nt)	PP_3150	hypothetical protein
*	?	NC_002947	3588140 =	85 (0.740)	6 (0.060)	6/204	NT	10.7%	intergenic (+18/‑57)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	3588208 =	29 (0.300)					coding (12/1272 nt)	benE‑II	benzoate transport protein
*	?	NC_002947	= 3622266	122 (1.070)	12 (0.120)	8/220	NT	9.4%	intergenic (‑186/+40)	PP_3192/PP_3193	hypothetical protein/hypothetical protein
	?	NC_002947	= 3622288	120 (1.160)					intergenic (‑208/+18)	PP_3192/PP_3193	hypothetical protein/hypothetical protein
*	?	NC_002947	= 3652910	87 (0.760)	6 (0.060)	5/232	NT	6.3%	coding (753/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
	?	NC_002947	= 3652935	95 (0.870)					coding (778/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
*	?	NC_002947	3775020 =	144 (1.260)	7 (0.060)	5/230	NT	5.1%	intergenic (‑4/+47)	PP_3335/PP_3336	hypothetical protein/hypothetical protein
	?	NC_002947	3775055 =	126 (1.170)					intergenic (‑39/+12)	PP_3335/PP_3336	hypothetical protein/hypothetical protein
*	?	NC_002947	3928377 =	87 (0.760)	6 (0.050)	6/234	NT	6.7%	intergenic (+9/‑131)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
	?	NC_002947	3928470 =	84 (0.770)					intergenic (+102/‑38)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
*	?	NC_002947	3947957 =	82 (0.720)	11 (0.120)	9/188	NT	19.1%	coding (136/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	3948042 =	30 (0.340)					coding (51/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3951141	60 (0.520)	3 (0.030)	3/188	NT	5.3%	intergenic (‑61/+134)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 3951201	60 (0.680)					intergenic (‑121/+74)	PP_3486/PP_3487	cytochrome c/hypothetical protein
*	?	NC_002947	3969629 =	NA (NA)	7 (0.060)	6/230	NT	NA	coding (220/321 nt)	PP_3499	transposase
	?	NC_002947	3969667 =	NA (NA)					coding (258/321 nt)	PP_3499	transposase
*	?	NC_002947	= 3971371	NA (NA)	4 (0.040)	4/232	NT	NA	coding (1246/1536 nt)	PP_3501	transposase
	?	NC_002947	= 3971411	NA (NA)					coding (1286/1536 nt)	PP_3501	transposase
*	?	NC_002947	3974772 =	76 (0.660)	5 (0.050)	4/234	NT	5.9%	intergenic (‑256/‑85)	PP_3503/PP_3504	sigma‑54 dependent transcriptional regulator/hypothetical protein
	?	NC_002947	3974818 =	87 (0.790)					intergenic (‑302/‑39)	PP_3503/PP_3504	sigma‑54 dependent transcriptional regulator/hypothetical protein
*	?	NC_002947	4033402 =	167 (1.460)	11 (0.100)	11/238	NT	6.4%	coding (996/1008 nt)	PP_3555	transmembrane sensor
	?	NC_002947	4033426 =	158 (1.420)					intergenic (+12/+2)	PP_3555/PP_3556	transmembrane sensor/membrane protein
*	?	NC_002947	4034883 =	77 (0.670)	4 (0.040)	4/228	NT	5.6%	intergenic (‑136/‑111)	PP_3556/PP_3557	membrane protein/methyl‑accepting chemotaxis transducer
	?	NC_002947	4034946 =	64 (0.600)					intergenic (‑199/‑48)	PP_3556/PP_3557	membrane protein/methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 4054008	116 (1.010)	7 (0.060)	7/230	NT	6.2%	coding (538/1320 nt)	PP_3573	monooxygenase
	?	NC_002947	= 4054033	101 (0.940)					coding (563/1320 nt)	PP_3573	monooxygenase
*	?	NC_002947	4067814 =	90 (0.790)	5 (0.050)	5/234	NT	5.5%	coding (1294/3108 nt)	mdtC	multidrug transporter membrane protein
	?	NC_002947	4067854 =	84 (0.770)					coding (1254/3108 nt)	mdtC	multidrug transporter membrane protein
*	?	NC_002947	= 4079481	62 (0.540)	4 (0.040)	4/196	NT	6.6%	intergenic (‑241/+143)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
	?	NC_002947	= 4079550	63 (0.690)					intergenic (‑310/+74)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
*	?	NC_002947	4094682 =	85 (0.740)	8 (0.080)	7/220	NT	9.1%	intergenic (+54/+81)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	4094751 =	84 (0.810)					intergenic (+123/+12)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
*	?	NC_002947	= 4094693	86 (0.750)	5 (0.050)	4/220	NT	5.8%	intergenic (+65/+70)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	= 4094738	84 (0.810)					intergenic (+110/+25)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
*	?	NC_002947	= 4131154	141 (1.230)	6 (0.060)	5/224	NT	5.3%	intergenic (+22/+90)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
	?	NC_002947	= 4131216	87 (0.830)					intergenic (+84/+28)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
*	?	NC_002947	= 4150085	73 (0.640)	19 (0.190)	11/208	NT	20.1%	intergenic (+40/‑357)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4150116	89 (0.910)					intergenic (+71/‑326)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	4159113 =	83 (0.730)	9 (0.090)	9/218	NT	11.2%	intergenic (+17/‑192)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159201 =	68 (0.660)					intergenic (+105/‑104)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	= 4159125	80 (0.700)	14 (0.140)	8/218	NT	16.7%	intergenic (+29/‑180)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	= 4159187	68 (0.660)					intergenic (+91/‑118)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	4171431 =	97 (0.850)	6 (0.050)	6/234	NT	6.1%	coding (736/879 nt)	PP_3670	DMT superfamily permease
	?	NC_002947	4171450 =	91 (0.830)					coding (717/879 nt)	PP_3670	DMT superfamily permease
*	?	NC_002947	4224384 =	67 (0.590)	18 (0.160)	17/242	NT	21.3%	intergenic (‑452/+369)	PP_3703/PP_3704	hypothetical protein/hypothetical protein
	?	NC_002947	4536248 =	NA (NA)					intergenic (+731/‑84)	PP_4022/PP_4024	hypothetical protein/transposase
*	?	NC_002947	= 4224393	65 (0.570)	34 (0.300)	31/242	NT	34.5%	intergenic (‑461/+360)	PP_3703/PP_3704	hypothetical protein/hypothetical protein
	?	NC_002947	= 4538286	NA (NA)					intergenic (+44/‑276)	PP_4025/PP_4027	transposase/hypothetical protein
*	?	NC_002947	= 4254384	93 (0.810)	6 (0.050)	5/240	NT	6.0%	coding (1788/2253 nt)	PP_3728	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4254434	95 (0.840)					coding (1738/2253 nt)	PP_3728	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	4282145 =	136 (1.190)	6 (0.060)	6/220	NT	5.1%	intergenic (‑678/+40)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
	?	NC_002947	4282184 =	99 (0.960)					intergenic (‑717/+1)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
*	?	NC_002947	4340085 =	49 (0.430)	16 (0.190)	12/176	NT	38.9%	intergenic (+26/‑305)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	4340169 =	15 (0.180)					intergenic (+110/‑221)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
*	?	NC_002947	4344327 =	53 (0.460)	7 (0.070)	7/206	NT	13.1%	intergenic (+14/‑142)	PP_3817/PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
	?	NC_002947	4344385 =	48 (0.500)					intergenic (+72/‑84)	PP_3817/PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
*	?	NC_002947	4350173 =	87 (0.760)	10 (0.100)	9/210	NT	13.4%	intergenic (‑181/+56)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
	?	NC_002947	4350224 =	54 (0.550)					intergenic (‑232/+5)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
*	?	NC_002947	= 4450528	139 (1.210)	8 (0.070)	6/232	NT	5.6%	coding (88/3564 nt)	nicB	nicotinate dehydrogenase subunit B
	?	NC_002947	= 4450543	136 (1.250)					coding (103/3564 nt)	nicB	nicotinate dehydrogenase subunit B
*	?	NC_002947	= 4455221	99 (0.860)	6 (0.050)	6/244	NT	5.1%	coding (1808/2178 nt)	PP_3950	methyl‑accepting chemotaxis transducer
	?	NC_002947	= 4455254	124 (1.080)					coding (1775/2178 nt)	PP_3950	methyl‑accepting chemotaxis transducer
*	?	NC_002947	4476352 =	112 (0.980)	7 (0.060)	6/232	NT	9.3%	intergenic (‑57/‑119)	PP_3966/PP_3967	transposase/MutT/nudix family protein
	?	NC_002947	= 4486419	30 (0.280)					intergenic (+76/‑21)	PP_3978/PP_3979	hypothetical protein/transposase
*	?	NC_002947	4524512 =	130 (1.140)	10 (0.100)	4/216	NT	8.7%	intergenic (+91/‑102)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
	?	NC_002947	4524584 =	94 (0.930)					intergenic (+163/‑30)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
*	?	NC_002947	4533612 =	108 (0.940)	11 (0.110)	10/220	NT	11.0%	intergenic (+10/‑164)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
	?	NC_002947	4533701 =	81 (0.780)					intergenic (+99/‑75)	PP_4020/cpo	oxidoreductase/non‑heme chloroperoxidase
*	?	NC_002947	4537557 =	NA (NA)	9 (0.080)	6/238	NT	21.3%	coding (848/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4626669	34 (0.300)					coding (881/1533 nt)	PP_4091	transposase
*	?	NC_002947	= 4575575	124 (1.080)	9 (0.090)	9/224	NT	6.6%	intergenic (+49/‑73)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
	?	NC_002947	= 4575602	140 (1.330)					intergenic (+76/‑46)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
*	?	NC_002947	= 4577865	108 (0.940)	9 (0.080)	6/234	NT	7.6%	intergenic (+30/+79)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	= 4577907	115 (1.050)					intergenic (+72/+37)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	= 4583538	90 (0.790)	6 (0.060)	6/204	NT	7.5%	intergenic (‑67/+104)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4583599	73 (0.760)					intergenic (‑128/+43)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	4586063 =	21 (0.180)	21 (0.270)	15/168	NT	59.6%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586167 =	14 (0.180)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4586100	16 (0.140)	25 (0.320)	21/168	NT	66.7%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	14 (0.180)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4611727	101 (0.880)	7 (0.060)	5/230	NT	6.6%	intergenic (+643/‑1464)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
	?	NC_002947	= 4611747	104 (0.960)					intergenic (+663/‑1444)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
*	?	NC_002947	4647603 =	21 (0.180)	17 (0.220)	12/166	NT	53.7%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	15 (0.190)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4647641	14 (0.120)	8 (0.100)	8/166	NT	39.5%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	15 (0.190)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4649318	107 (0.930)	6 (0.050)	6/234	NT	5.5%	coding (1642/1710 nt)	PP_4113	hypothetical protein
	?	NC_002947	= 4649332	103 (0.940)					coding (1628/1710 nt)	PP_4113	hypothetical protein
*	?	NC_002947	4675357 =	40 (0.350)	9 (0.100)	7/198	NT	24.5%	intergenic (+10/+94)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
	?	NC_002947	4675415 =	23 (0.250)					intergenic (+68/+36)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
*	?	NC_002947	4700790 =	116 (1.010)	12 (0.120)	11/216	NT	10.1%	intergenic (‑57/+93)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	4700862 =	111 (1.100)					intergenic (‑129/+21)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	= 4700803	114 (1.000)	12 (0.120)	9/216	NT	10.2%	intergenic (‑70/+80)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	= 4700847	111 (1.100)					intergenic (‑114/+36)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	= 4717234	108 (0.940)	6 (0.050)	5/242	NT	5.1%	coding (280/516 nt)	fabA	3R‑3‑hydroxydecanoyl‑ACP dehydratase
	?	NC_002947	= 4717255	114 (1.000)					coding (301/516 nt)	fabA	3R‑3‑hydroxydecanoyl‑ACP dehydratase
*	?	NC_002947	= 4717770	83 (0.730)	5 (0.050)	5/230	NT	5.8%	coding (289/1221 nt)	fabB	3‑oxoacyl‑ACP synthase
	?	NC_002947	= 4717784	83 (0.770)					coding (303/1221 nt)	fabB	3‑oxoacyl‑ACP synthase
*	?	NC_002947	4742647 =	89 (0.780)	5 (0.050)	5/230	NT	5.9%	coding (1390/1593 nt)	PP_4197	GntR family transcriptional regulator
	?	NC_002947	4742701 =	76 (0.700)					coding (1336/1593 nt)	PP_4197	GntR family transcriptional regulator
*	?	NC_002947	4755172 =	103 (0.900)	8 (0.080)	6/226	NT	7.4%	coding (368/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	4755215 =	104 (0.980)					coding (411/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	= 4771496	126 (1.100)	7 (0.060)	6/244	NT	5.2%	coding (7816/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	= 4771537	131 (1.140)					coding (7775/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	4803215 =	142 (1.240)	9 (0.080)	8/240	NT	6.1%	coding (144/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
	?	NC_002947	4803240 =	139 (1.230)					coding (119/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
*	?	NC_002947	4808219 =	0 (0.000)	41 (0.500)	23/174	NT	55.8%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	65 (0.800)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4845173 =	50 (0.440)	6 (0.060)	5/212	NT	14.7%	intergenic (+14/‑123)	PP_4260/PP_4261	hypothetical protein/cation‑transporting P‑type ATPase
	?	NC_002947	4845266 =	26 (0.260)					intergenic (+107/‑30)	PP_4260/PP_4261	hypothetical protein/cation‑transporting P‑type ATPase
*	?	NC_002947	= 4852498	32 (0.280)	8 (0.110)	8/162	NT	19.9%	intergenic (‑124/+173)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
	?	NC_002947	= 4852557	43 (0.570)					intergenic (‑183/+114)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
*	?	NC_002947	4856141 =	116 (1.010)	11 (0.110)	8/216	NT	10.4%	intergenic (+68/+128)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	4856228 =	87 (0.860)					intergenic (+155/+41)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	4860907 =	122 (1.070)	7 (0.060)	6/230	NT	6.1%	coding (188/2331 nt)	ligA	DNA ligase
	?	NC_002947	4860926 =	102 (0.950)					coding (169/2331 nt)	ligA	DNA ligase
*	?	NC_002947	= 4861197	97 (0.850)	27 (0.300)	14/194	NT	24.6%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	88 (0.970)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	4870711 =	124 (1.080)	7 (0.080)	6/194	NT	7.4%	intergenic (+16/‑104)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	4870781 =	76 (0.840)					intergenic (+86/‑34)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
*	?	NC_002947	4886181 =	18 (0.160)	6 (0.070)	6/186	NT	25.7%	intergenic (+15/+108)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	4886268 =	21 (0.240)					intergenic (+102/+21)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 4886209	15 (0.130)	16 (0.180)	12/186	NT	49.7%	intergenic (+43/+80)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 4886238	21 (0.240)					intergenic (+72/+51)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 4890813	96 (0.840)	6 (0.060)	5/226	NT	6.0%	intergenic (+168/‑71)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
	?	NC_002947	= 4890835	99 (0.930)					intergenic (+190/‑49)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
*	?	NC_002947	4893598 =	35 (0.310)	10 (0.110)	9/190	NT	29.7%	intergenic (+28/‑180)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	4893677 =	20 (0.220)					intergenic (+107/‑101)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	= 4893624	35 (0.310)	9 (0.100)	6/190	NT	27.6%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4893649	20 (0.220)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4896423 =	40 (0.350)	23 (0.240)	16/202	NT	43.3%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4896512 =	27 (0.280)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4896443	36 (0.310)	38 (0.400)	21/202	NT	57.2%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4896490	27 (0.280)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	4901771 =	107 (0.930)	7 (0.060)	7/230	NT	6.7%	coding (1190/1533 nt)	PP_4309	NCS1 family transporter
	?	NC_002947	4901797 =	94 (0.870)					coding (1216/1533 nt)	PP_4309	NCS1 family transporter
*	?	NC_002947	= 4907455	109 (0.950)	8 (0.070)	8/228	NT	7.4%	coding (379/939 nt)	PP_4316	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	= 4907466	97 (0.910)					coding (368/939 nt)	PP_4316	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	5007888 =	75 (0.660)	7 (0.060)	7/230	NT	8.7%	intergenic (+222/‑677)	PP_5674/PP_4411	hypothetical protein/hypothetical protein
	?	NC_002947	5007917 =	76 (0.700)					intergenic (+251/‑648)	PP_5674/PP_4411	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5033687	0 (0.000)	3 (0.030)	3/226	NT	100%	coding (78/336 nt)	PP_4438	transposase
	?	NC_002947	= 5036691	NA (NA)					coding (134/336 nt)	PP_4442	transposase
*	?	NC_002947	= 5035308	0 (0.000)	6 (0.060)	6/232	NT	100%	coding (1300/1536 nt)	PP_4439	transposase
	?	NC_002947	= 5038236	NA (NA)					coding (1280/1536 nt)	PP_4443	transposase
*	?	NC_002947	5099995 =	67 (0.590)	11 (0.120)	10/194	NT	20.3%	intergenic (+33/+120)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
	?	NC_002947	5100077 =	33 (0.360)					intergenic (+115/+38)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 5102714	111 (0.970)	8 (0.080)	7/224	NT	7.0%	coding (783/789 nt)	phhA	phenylalanine‑4‑hydroxylase
	?	NC_002947	= 5102719	112 (1.070)					coding (788/789 nt)	phhA	phenylalanine‑4‑hydroxylase
*	?	NC_002947	5105457 =	116 (1.010)	9 (0.080)	8/228	NT	7.7%	coding (2703/3021 nt)	ydiJ	putative oxidoreductase
	?	NC_002947	5105491 =	107 (1.000)					coding (2669/3021 nt)	ydiJ	putative oxidoreductase
*	?	NC_002947	= 5105464	116 (1.010)	6 (0.060)	6/228	NT	5.3%	coding (2696/3021 nt)	ydiJ	putative oxidoreductase
	?	NC_002947	= 5105482	107 (1.000)					coding (2678/3021 nt)	ydiJ	putative oxidoreductase
*	?	NC_002947	5125125 =	80 (0.700)	9 (0.080)	8/226	NT	9.3%	intergenic (+51/‑131)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
	?	NC_002947	5125224 =	101 (0.950)					intergenic (+150/‑32)	PP_4511/PP_4512	AraC family transcriptional regulator/DMT superfamily permease
*	?	NC_002947	= 5159824	39 (0.340)	18 (0.210)	15/182	NT	33.6%	intergenic (+39/+67)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
	?	NC_002947	= 5159839	42 (0.490)					intergenic (+54/+52)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
*	?	NC_002947	5162618 =	41 (0.360)	24 (0.270)	17/192	NT	45.2%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	26 (0.290)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5162643	37 (0.320)	14 (0.160)	11/192	NT	33.7%	intergenic (+118/+83)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	= 5162675	26 (0.290)					intergenic (+150/+51)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	5201627 =	32 (0.280)	15 (0.190)	11/170	NT	48.2%	intergenic (‑65/‑115)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201722 =	10 (0.130)					intergenic (‑160/‑20)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5201663	32 (0.280)	17 (0.210)	13/170	NT	51.3%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	10 (0.130)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5210282	82 (0.720)	7 (0.070)	7/212	NT	8.0%	intergenic (‑100/+78)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	= 5210341	89 (0.890)					intergenic (‑159/+19)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	5274048 =	112 (0.980)	6 (0.060)	5/218	NT	5.9%	intergenic (+22/+84)	rlmG/PP_4649	ribosomal RNA large subunit methyltransferase G/hypothetical protein
	?	NC_002947	5274121 =	91 (0.890)					intergenic (+95/+11)	rlmG/PP_4649	ribosomal RNA large subunit methyltransferase G/hypothetical protein
*	?	NC_002947	5288442 =	58 (0.510)	6 (0.070)	4/184	NT	16.3%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5288536 =	18 (0.210)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	= 5318245	107 (0.930)	6 (0.060)	6/228	NT	5.4%	coding (1177/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
	?	NC_002947	= 5318261	109 (1.020)					coding (1161/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
*	?	NC_002947	5333243 =	99 (0.860)	7 (0.070)	7/214	NT	7.7%	intergenic (+27/‑216)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
	?	NC_002947	5333303 =	81 (0.810)					intergenic (+87/‑156)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
*	?	NC_002947	= 5336764	95 (0.830)	5 (0.040)	4/240	NT	5.1%	coding (166/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
	?	NC_002947	= 5336783	91 (0.810)					coding (185/1443 nt)	PP_4696	nitrogen regulation protein NR(I)
*	?	NC_002947	= 5339636	146 (1.280)	8 (0.070)	7/240	NT	5.2%	coding (816/1383 nt)	pcnB	poly(A) polymerase
	?	NC_002947	= 5339656	148 (1.310)					coding (836/1383 nt)	pcnB	poly(A) polymerase
*	?	NC_002947	= 5385875	91 (0.790)	5 (0.050)	5/234	NT	5.2%	coding (558/1146 nt)	lldD	L‑lactate dehydrogenase
	?	NC_002947	= 5385891	96 (0.870)					coding (574/1146 nt)	lldD	L‑lactate dehydrogenase
*	?	NC_002947	= 5453186	6 (0.050)	20 (0.290) +48 bp	13/148	NT	41.2%	intergenic (+151/‑204)	lnt/PP_4791	apolipoprotein N‑acyltransferase/transposase
	?	NC_002947	5545674 =	88 (0.770)					intergenic (‑766/+111)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	= 5460828	123 (1.070)	10 (0.090)	10/230	NT	7.6%	intergenic (+161/‑56)	holA/PP_4797	DNA polymerase III subunit delta/hypothetical protein
	?	NC_002947	= 5460836	127 (1.180)					intergenic (+169/‑48)	holA/PP_4797	DNA polymerase III subunit delta/hypothetical protein
*	?	NC_002947	5477138 =	90 (0.790)	20 (0.260)	12/162	NT	35.5%	intergenic (+3/+109)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
	?	NC_002947	5477237 =	13 (0.170)					intergenic (+102/+10)	PP_4813/PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
*	?	NC_002947	5480705 =	121 (1.060)	6 (0.050)	6/236	NT	5.0%	coding (146/1356 nt)	PP_4819	hypothetical protein
	?	NC_002947	5480748 =	110 (0.990)					coding (189/1356 nt)	PP_4819	hypothetical protein
*	?	NC_002947	5485172 =	60 (0.520)	6 (0.070)	5/192	NT	12.5%	intergenic (+30/‑117)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
	?	NC_002947	5485246 =	37 (0.410)					intergenic (+104/‑43)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
*	?	NC_002947	5513290 =	66 (0.580)	10 (0.110)	8/192	NT	15.9%	intergenic (+20/‑134)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	5513398 =	54 (0.600)					intergenic (+128/‑26)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	= 5513315	62 (0.540)	16 (0.180)	15/192	NT	23.7%	intergenic (+45/‑109)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	= 5513371	54 (0.600)					intergenic (+101/‑53)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	5537079 =	25 (0.220)	19 (0.210)	11/190	NT	45.0%	intergenic (+8/+95)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	5537155 =	27 (0.300)					intergenic (+84/+19)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	= 5537105	15 (0.130)	15 (0.170)	9/190	NT	43.7%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	27 (0.300)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	5538592 =	49 (0.430)	4 (0.040)	4/202	NT	11.5%	intergenic (+34/+87)	PP_4871/PP_4872	lysine decarboxylase family protein/hypothetical protein
	?	NC_002947	5538647 =	21 (0.220)					intergenic (+89/+32)	PP_4871/PP_4872	lysine decarboxylase family protein/hypothetical protein
*	?	NC_002947	= 5560797	105 (0.920)	17 (0.170)	13/218	NT	14.9%	intergenic (‑250/+52)	hisZ/hflC	ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase
	?	NC_002947	= 5560808	100 (0.980)					intergenic (‑261/+41)	hisZ/hflC	ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase
*	?	NC_002947	= 5571456	83 (0.730)	6 (0.050)	4/240	NT	6.0%	intergenic (+27/+114)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
	?	NC_002947	= 5571543	107 (0.950)					intergenic (+114/+27)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
*	?	NC_002947	5594143 =	22 (0.190)	10 (0.110)	8/188	NT	30.8%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594236 =	28 (0.320)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5594170	26 (0.230)	18 (0.200)	10/188	NT	42.8%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5594207	28 (0.320)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5599574	94 (0.820)	6 (0.060)	6/230	NT	6.1%	coding (3959/5418 nt)	PP_4924	subtilase family serine protease
	?	NC_002947	= 5599589	97 (0.900)					coding (3944/5418 nt)	PP_4924	subtilase family serine protease
*	?	NC_002947	= 5614190	124 (1.080)	10 (0.090)	9/228	NT	7.8%	coding (1383/1422 nt)	hldE	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
	?	NC_002947	= 5614195	121 (1.130)					coding (1378/1422 nt)	hldE	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
*	?	NC_002947	= 5631226	117 (1.020)	6 (0.060)	6/226	NT	5.2%	coding (705/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
	?	NC_002947	= 5631237	111 (1.050)					coding (716/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
*	?	NC_002947	= 5643297	108 (0.940)	8 (0.080)	6/224	NT	6.8%	intergenic (+31/‑92)	dbpA/yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
	?	NC_002947	= 5643341	119 (1.130)					intergenic (+75/‑48)	dbpA/yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
*	?	NC_002947	5653264 =	127 (1.110)	7 (0.060)	7/232	NT	5.7%	coding (99/252 nt)	PP_4962	hypothetical protein
	?	NC_002947	5653301 =	112 (1.030)					coding (62/252 nt)	PP_4962	hypothetical protein
*	?	NC_002947	5664463 =	124 (1.080)	11 (0.100)	9/236	NT	8.2%	intergenic (+7/+44)	PP_4971/PP_4972	outer membrane‑bound lytic murein transglycolase A/hypothetical protein
	?	NC_002947	5664500 =	128 (1.160)					intergenic (+44/+7)	PP_4971/PP_4972	outer membrane‑bound lytic murein transglycolase A/hypothetical protein
*	?	NC_002947	5671666 =	31 (0.270)	8 (0.090)	7/196	NT	25.4%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671751 =	22 (0.240)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5671689	25 (0.220)	6 (0.070)	6/196	NT	22.2%	intergenic (+57/‑113)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	= 5671726	22 (0.240)					intergenic (+94/‑76)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	= 5681419	72 (0.630)	6 (0.060)	6/198	NT	9.0%	intergenic (‑85/+123)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
	?	NC_002947	= 5681488	63 (0.680)					intergenic (‑154/+54)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
*	?	NC_002947	5695264 =	107 (0.930)	12 (0.110)	12/230	NT	11.3%	coding (933/1005 nt)	pyrB	aspartate carbamoyltransferase
	?	NC_002947	5695289 =	87 (0.810)					coding (958/1005 nt)	pyrB	aspartate carbamoyltransferase
*	?	NC_002947	5698804 =	88 (0.770)	6 (0.050)	6/234	NT	7.1%	intergenic (+38/‑129)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698845 =	72 (0.660)					intergenic (+79/‑88)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	5704565 =	102 (0.890)	7 (0.080)	6/192	NT	10.4%	intergenic (+34/+78)	PP_5006/PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
	?	NC_002947	5704628 =	41 (0.460)					intergenic (+97/+15)	PP_5006/PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
*	?	NC_002947	= 5743386	85 (0.740)	17 (0.160)	10/226	NT	19.5%	intergenic (‑163/+84)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	= 5743450	62 (0.580)					intergenic (‑227/+20)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	5743392 =	83 (0.730)	19 (0.190)	9/218	NT	22.1%	intergenic (‑169/+78)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743446 =	60 (0.590)					intergenic (‑223/+24)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	= 5759491	38 (0.330)	11 (0.130)	6/180	NT	27.8%	intergenic (+44/+112)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	= 5759519	29 (0.340)					intergenic (+72/+84)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	5762590 =	116 (1.010)	10 (0.090)	8/230	NT	9.0%	intergenic (+50/‑91)	gpmI/PP_5057	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase
	?	NC_002947	5762622 =	93 (0.860)					intergenic (+82/‑59)	gpmI/PP_5057	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase
*	?	NC_002947	= 5786551	50 (0.440)	4 (0.040)	4/196	NT	7.6%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5786588	57 (0.620)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5798893 =	103 (0.900)	8 (0.070)	6/234	NT	7.1%	coding (1026/1590 nt)	PP_5077	hypothetical protein
	?	NC_002947	5798914 =	109 (0.990)					coding (1005/1590 nt)	PP_5077	hypothetical protein
*	?	NC_002947	= 5816927	25 (0.220)	9 (0.090)	7/208	NT	29.8%	intergenic (+57/+72)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5816954	21 (0.220)					intergenic (+84/+45)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	5822883 =	112 (0.980)	7 (0.060)	7/234	NT	6.4%	coding (356/597 nt)	rdgB	dITP/XTP pyrophosphatase
	?	NC_002947	5822920 =	96 (0.870)					coding (393/597 nt)	rdgB	dITP/XTP pyrophosphatase
*	?	NC_002947	5827863 =	108 (0.940)	7 (0.060)	7/232	NT	5.5%	intergenic (+9/+190)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
	?	NC_002947	5827987 =	140 (1.290)					intergenic (+133/+66)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
*	?	NC_002947	= 5827881	127 (1.110)	9 (0.090)	8/222	NT	6.9%	intergenic (+27/+172)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
	?	NC_002947	= 5827967	128 (1.230)					intergenic (+113/+86)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
*	?	NC_002947	= 5841953	111 (0.970)	7 (0.060)	7/234	NT	5.9%	coding (466/1431 nt)	calB	coniferyl aldehyde dehydrogenase
	?	NC_002947	= 5841968	118 (1.070)					coding (481/1431 nt)	calB	coniferyl aldehyde dehydrogenase
*	?	NC_002947	= 5858920	49 (0.430)	4 (0.050)	4/184	NT	9.0%	intergenic (+42/+96)	PP_5134/PP_5135	hypothetical protein/ABC transporter substrate‑binding protein
	?	NC_002947	= 5858965	44 (0.510)					intergenic (+87/+51)	PP_5134/PP_5135	hypothetical protein/ABC transporter substrate‑binding protein
*	?	NC_002947	5869755 =	132 (1.150)	9 (0.080)	7/232	NT	7.0%	coding (207/747 nt)	PP_5144	hypothetical protein
	?	NC_002947	5869792 =	115 (1.060)					coding (244/747 nt)	PP_5144	hypothetical protein
*	?	NC_002947	= 5870345	55 (0.480)	8 (0.090)	7/186	NT	14.2%	intergenic (+50/+84)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	= 5870380	55 (0.630)					intergenic (+85/+49)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	5877040 =	140 (1.220)	8 (0.090)	7/196	NT	7.1%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877122 =	97 (1.050)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	5897799 =	59 (0.520)	12 (0.130)	9/190	NT	23.8%	intergenic (‑143/+91)	PP_5172/PP_5173	hypothetical protein/RND family transporter
	?	NC_002947	5897875 =	31 (0.350)					intergenic (‑219/+15)	PP_5172/PP_5173	hypothetical protein/RND family transporter
*	?	NC_002947	5903827 =	65 (0.570)	9 (0.090)	5/212	NT	12.9%	intergenic (+27/+80)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	5903887 =	65 (0.650)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	= 5903842	64 (0.560)	15 (0.150)	7/212	NT	19.9%	intergenic (+42/+65)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903870	65 (0.650)					intergenic (+70/+37)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914213 =	42 (0.370)	3 (0.030)	3/188	NT	11.9%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914309 =	12 (0.140)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914240	37 (0.320)	11 (0.120)	9/188	NT	35.2%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914280	12 (0.140)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5922262	111 (0.970)	6 (0.050)	6/236	NT	5.0%	coding (2225/2874 nt)	gcvP‑II	glycine dehydrogenase
	?	NC_002947	= 5922282	120 (1.080)					coding (2205/2874 nt)	gcvP‑II	glycine dehydrogenase
*	?	NC_002947	= 5943678	69 (0.600)	5 (0.050)	4/200	NT	7.1%	intergenic (+30/+55)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	= 5943699	74 (0.790)					intergenic (+51/+34)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
*	?	NC_002947	5947161 =	128 (1.120)	8 (0.080)	7/224	NT	6.0%	intergenic (‑97/+109)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
	?	NC_002947	5947230 =	132 (1.260)					intergenic (‑166/+40)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
*	?	NC_002947	= 5950777	115 (1.000)	7 (0.060)	6/234	NT	5.8%	coding (1438/1503 nt)	ppx	exopolyphosphatase
	?	NC_002947	= 5950813	116 (1.060)					coding (1474/1503 nt)	ppx	exopolyphosphatase
*	?	NC_002947	5976500 =	116 (1.010)	6 (0.060)	4/228	NT	5.3%	coding (245/1491 nt)	yifB	ATP‑dependent chelatase
	?	NC_002947	5976543 =	104 (0.970)					coding (288/1491 nt)	yifB	ATP‑dependent chelatase
*	?	NC_002947	5981456 =	133 (1.160)	11 (0.110)	7/220	NT	8.9%	coding (2045/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5981491 =	104 (1.010)					coding (2080/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
*	?	NC_002947	6000959 =	102 (0.890)	7 (0.080)	7/184	NT	11.8%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6001053 =	28 (0.320)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	= 6006630	36 (0.310)	19 (0.240)	14/172	NT	39.4%	intergenic (+42/+57)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
	?	NC_002947	= 6006642	33 (0.410)					intergenic (+54/+45)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
*	?	NC_002947	6009165 =	6 (0.050)	17 (0.200)	12/178	NT	76.6%	intergenic (+6/+76)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
	?	NC_002947	6009242 =	6 (0.070)					coding (1667/1668 nt)	PP_5263	GGDEF domain‑containing protein
*	?	NC_002947	= 6009197	4 (0.030)	20 (0.240)	13/178	NT	81.8%	intergenic (+38/+44)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
	?	NC_002947	= 6009208	6 (0.070)					intergenic (+49/+33)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
*	?	NC_002947	= 6013891	30 (0.260)	18 (0.200)	13/190	NT	43.2%	intergenic (+40/+70)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
	?	NC_002947	= 6013919	24 (0.270)					intergenic (+68/+42)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
*	?	NC_002947	6019304 =	112 (0.980)	4 (0.040)	4/198	NT	5.1%	intergenic (‑49/+96)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	6019380 =	58 (0.620)					intergenic (‑125/+20)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	6027949 =	49 (0.430)	11 (0.120)	9/202	NT	29.9%	intergenic (‑37/+74)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
	?	NC_002947	6028006 =	11 (0.120)					intergenic (‑94/+17)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
*	?	NC_002947	6032808 =	67 (0.590)	20 (0.240)	19/178	NT	40.9%	intergenic (+16/+120)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
	?	NC_002947	6032890 =	9 (0.110)					intergenic (+98/+38)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
*	?	NC_002947	6060487 =	90 (0.790)	14 (0.140)	10/216	NT	13.0%	intergenic (+67/+114)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	6060574 =	108 (1.070)					intergenic (+154/+27)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6060500	88 (0.770)	9 (0.090)	9/216	NT	8.8%	intergenic (+80/+101)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	= 6060559	108 (1.070)					intergenic (+139/+42)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6067955	124 (1.080)	8 (0.070)	7/238	NT	6.1%	coding (542/1341 nt)	PP_5322	metal ion transporter
	?	NC_002947	= 6067976	125 (1.120)					coding (563/1341 nt)	PP_5322	metal ion transporter
*	?	NC_002947	6076376 =	113 (0.990)	6 (0.060)	6/228	NT	5.9%	coding (242/2289 nt)	PP_5328	phosphate ABC transporter permease
	?	NC_002947	6076413 =	86 (0.800)					coding (205/2289 nt)	PP_5328	phosphate ABC transporter permease
*	?	NC_002947	= 6087628	119 (1.040)	6 (0.060)	5/226	NT	5.4%	intergenic (+23/‑207)	oruR/aphA	ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase
	?	NC_002947	= 6087692	99 (0.930)					intergenic (+87/‑143)	oruR/aphA	ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase
*	?	NC_002947	= 6140035	79 (0.690)	6 (0.060)	6/230	NT	7.3%	coding (1184/1473 nt)	cusB	CzcB family copper RND transporter membrane fusion protein
	?	NC_002947	= 6140040	77 (0.710)					coding (1189/1473 nt)	cusB	CzcB family copper RND transporter membrane fusion protein