breseq  version 0.33.1  revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence seq id position mutation freq annotation gene description
MC CP000731 1 Δ27,041 bp 100% repA–USA300HOU_pUSA300HOUMR0033 26 genes
RA USA300TCH1516_ALE 19,009 C→T 100% S222F (TCC→TTC)  gdpP → Cyclic‑di‑AMP phosphodiesterase GdpP
RA USA300TCH1516_ALE 478,502 C→A 100% D342E (GAC→GAA)  nuoL → NADH‑quinone oxidoreductase subunit L
RA USA300TCH1516_ALE 584,121 G→T 100% intergenic (+205/‑67) rplA → / → rplJ 50S ribosomal protein L1/50S ribosomal protein L10
RA USA300TCH1516_ALE 707,909 A→T 100% M1M (TTG→ATG) † znuC_1 ← High‑affinity zinc uptake system ATP‑binding protein ZnuC
RA USA300TCH1516_ALE 973,213 C→A 100% E175* (GAG→TAG)  yitU_1 ← 5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase YitU
RA USA300TCH1516_ALE 1,196,508 C→A 100% S338Y (TCT→TAT)  ftsZ → Cell division protein FtsZ
RA USA300TCH1516_ALE 1,231,411 A→G 100% D19G (GAT→GGT)  stp → Serine/threonine phosphatase stp
RA USA300TCH1516_ALE 1,539,250 C→G 100% intergenic (‑349/+37) aroC ← / ← USA300HOU_RS07505 Chorismate synthase/hypothetical protein
RA USA300TCH1516_ALE 1,646,189 G→C 100% A155G (GCA→GGA)  ypdF ← Aminopeptidase YpdF
RA USA300TCH1516_ALE 1,744,473 C→T 100% A67T (GCT→ACT)  apt ← Adenine phosphoribosyltransferase
RA USA300TCH1516_ALE 1,758,882 G→A 100% Q138* (CAA→TAA)  USA300HOU_RS08780 ← hypothetical protein
RA USA300TCH1516_ALE 2,279,705 G→A 100% A943V (GCA→GTA)  ebh_3 ← Extracellular matrix‑binding protein ebh
RA USA300TCH1516_ALE 2,337,959 C→T 100% intergenic (‑125/‑283) adhR ← / → USA300HOU_RS11940 HTH‑type transcriptional regulator AdhR/Hyaluronate lyase
RA USA300TCH1516_ALE 2,343,438 C→T 100% intergenic (+114/+250) USA300HOU_RS11955 → / ← aldC_1 65 kDa membrane protein/Alpha‑acetolactate decarboxylase
RA USA300TCH1516_ALE 2,455,692 Δ1 bp 100% coding (1210/1260 nt) lyrA → Lysostaphin resistance protein A
RA USA300TCH1516_ALE 2,532,298 A→T 100% T15T (ACA→ACT)  femA_3 → Aminoacyltransferase FemA

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 34539 34599 61 2 [1] [1] 2 USA300HOU_RS00135 hypothetical protein
* * ÷ USA300TCH1516_ALE 43732 43759 28 2 [1] [0] 2 USA300TCH1516_00035 hypothetical protein
* * ÷ USA300TCH1516_ALE 52275 52355 81 2 [1] [1] 2 USA300HOU_RS00215 hypothetical protein
* * ÷ USA300TCH1516_ALE 52563–52854 52864 11–302 2 [1] [0] 2 USA300HOU_RS00215/USA300HOU_RS00220 hypothetical protein/hypothetical protein
* * ÷ USA300TCH1516_ALE 53006 53197 192 2 [1] [1] 2 [USA300HOU_RS00220] [USA300HOU_RS00220]
* * ÷ USA300TCH1516_ALE 84135 84146 12 2 [1] [1] 2 oppD_1 Oligopeptide transport ATP‑binding protein OppD
* * ÷ USA300TCH1516_ALE 90877 90906 30 2 [1] [1] 2 USA300TCH1516_00081 hypothetical protein
* * ÷ USA300TCH1516_ALE 91199 91218 20 2 [1] [1] 2 USA300TCH1516_00081/dus_1 hypothetical protein/putative tRNA‑dihydrouridine synthase
* * ÷ USA300TCH1516_ALE 112078 112286 209 2 [1] [1] 2 USA300HOU_RS00525 putative lipoprotein
* * ÷ USA300TCH1516_ALE 123483 123508 26 2 [1] [1] 2 eamA putative amino‑acid metabolite efflux pump
* * ÷ USA300TCH1516_ALE 125089 125145 57 2 [1] [1] 2 norG HTH‑type transcriptional regulator NorG
* * ÷ USA300TCH1516_ALE 128253 128327 75 2 [1] [1] 2 spa Immunoglobulin G‑binding protein A
* * ÷ USA300TCH1516_ALE 150268 150341 74 2 [1] [1] 2 wbnH O‑antigen biosynthesis glycosyltransferase WbnH
* * ÷ USA300TCH1516_ALE 155795 155849 55 2 [1] [1] 2 USA300HOU_RS00705/treR_1 hypothetical protein/HTH‑type transcriptional regulator TreR
* * ÷ USA300TCH1516_ALE 198485 198507 23 2 [1] [1] 2 ssuC Putative aliphatic sulfonates transport permease protein SsuC
* * ÷ USA300TCH1516_ALE 203282 203384 103 2 [1] [1] 2 USA300HOU_RS00940/grsB hypothetical protein/Gramicidin S synthase 2
* * ÷ USA300TCH1516_ALE 205527 205629 103 2 [0] [1] 2 grsB Gramicidin S synthase 2
* * ÷ USA300TCH1516_ALE 208543 208556 14 2 [1] [1] 2 grsB Gramicidin S synthase 2
* * ÷ USA300TCH1516_ALE 217976 218055 80 2 [1] [1] 2 brnQ_1 Branched‑chain amino acid transport system 2 carrier protein
* * ÷ USA300TCH1516_ALE 220351 220392 42 2 [1] [1] 2 ipdC Indole‑3‑pyruvate decarboxylase
* * ÷ USA300TCH1516_ALE 222184 222236 53 2 [1] [1] 2 ptsG_1 PTS system glucose‑specific EIICBA component
* * ÷ USA300TCH1516_ALE 231542 231592 51 2 [1] [1] 2 hsdR Type‑1 restriction enzyme R protein
* * ÷ USA300TCH1516_ALE 238122 238204 83 2 [1] [1] 2 gsiD_2 Glutathione transport system permease protein GsiD
* * ÷ USA300TCH1516_ALE 245554 245640 87 2 [1] [1] 2 lytM_1 Glycyl‑glycine endopeptidase LytM
* * ÷ USA300TCH1516_ALE 264861 264916 56 2 [1] [1] 2 ugpQ_2 Glycerophosphodiester phosphodiesterase, cytoplasmic
* * ÷ USA300TCH1516_ALE 297504 297576 73 2 [1] [1] 2 tarK Teichoic acid ribitol‑phosphate polymerase TarK
* * ÷ USA300TCH1516_ALE 305474 305491 18 2 [1] [1] 2 scdA Iron‑sulfur cluster repair protein ScdA
* * ÷ USA300TCH1516_ALE 319107 319136 30 2 [1] [1] 2 USA300TCH1516_00272 hypothetical protein
* * ÷ USA300TCH1516_ALE 322076 322150 75 2 [1] [1] 2 USA300HOU_RS01440/lytM_2 Penicillin acylase/Glycyl‑glycine endopeptidase LytM
* * ÷ USA300TCH1516_ALE 362981 363043 63 2 [1] [0] 2 psuG Pseudouridine‑5'‑phosphate glycosidase
* * ÷ USA300TCH1516_ALE 378333 378358 26 2 [1] [1] 2 USA300HOU_RS01725 Glycine cleavage system H‑like protein
* * ÷ USA300TCH1516_ALE 383015 383132 118 2 [1] [0] 2 ulaA Ascorbate‑specific PTS system EIIC component
* * ÷ USA300TCH1516_ALE 383337 383391 55 3 [1] [1] 2 ulaA Ascorbate‑specific PTS system EIIC component
* * ÷ USA300TCH1516_ALE 384098 384144 47 2 [1] [1] 2 ulaB Ascorbate‑specific PTS system EIIB component
* * ÷ USA300TCH1516_ALE 394812 394866 55 2 [1] [1] 2 USA300HOU_RS01805/ydaF hypothetical protein/Putative ribosomal N‑acetyltransferase YdaF
* * ÷ USA300TCH1516_ALE 400658 400715 58 2 [1] [1] 2 tatAy Sec‑independent protein translocase protein TatAy
* * ÷ USA300TCH1516_ALE 416407 416420 14 2 [1] [0] 2 ykuT putative MscS family protein YkuT
* * ÷ USA300TCH1516_ALE 449915 449998 84 2 [1] [1] 2 speC_3 Exotoxin type C
* * ÷ USA300TCH1516_ALE 465964 466062 99 2 [1] [0] 2 [lpl2_4] [lpl2_4]
* * ÷ USA300TCH1516_ALE 468170 468201 32 2 [1] [1] 2 USA300HOU_RS02220 putative lipoprotein
* * ÷ USA300TCH1516_ALE 480294 480437 144 2 [1] [1] 2 USA300HOU_RS02280 hypothetical protein
* * ÷ USA300TCH1516_ALE 484186 484304 119 2 [1] [1] 2 est_1 Carboxylesterase
* * ÷ USA300TCH1516_ALE 504660 504766 107 2 [1] [1] 2 treP_1 PTS system trehalose‑specific EIIBC component
* * ÷ USA300TCH1516_ALE 519347 519529 183 2 [1] [1] 2 speA_2 Arginine decarboxylase
* * ÷ USA300TCH1516_ALE 521190 521286 97 2 [1] [1] 2 [dnaX_2] [dnaX_2]
* * ÷ USA300TCH1516_ALE 523329 523485 157 2 [1] [1] 2 yabA/yfiC Initiation‑control protein YabA/tRNA1(Val) (adenine(37)‑N6)‑methyltransferase
* * ÷ USA300TCH1516_ALE 530422 530525 104 2 [1] [1] 2 [USA300HOU_RS02525] [USA300HOU_RS02525]
* * ÷ USA300TCH1516_ALE 531248 531413 166 2 [1] [1] 2 ispE 4‑diphosphocytidyl‑2‑C‑methyl‑D‑erythritol kinase
* * ÷ USA300TCH1516_ALE 537414 537495 82 2 [1] [1] 2 pth Peptidyl‑tRNA hydrolase
* * ÷ USA300TCH1516_ALE 544521 544652 132 2 [1] [1] 2 [divIC] [divIC]
* * ÷ USA300TCH1516_ALE 545273 545303 31 2 [1] [1] 2 tilS tRNA(Ile)‑lysidine synthase
* * ÷ USA300TCH1516_ALE 550413 550481 69 2 [1] [1] 2 hslO 33 kDa chaperonin
* * ÷ USA300TCH1516_ALE 566125 566217 93 2 [1] [1] 2 nupC_2 Nucleoside permease NupC
* * ÷ USA300TCH1516_ALE 567228 567376 149 2 [1] [1] 2 ctsR Transcriptional regulator CtsR
* * ÷ USA300TCH1516_ALE 571645 571712 68 2 [1] [1] 2 clpC/radA ATP‑dependent Clp protease ATP‑binding subunit ClpC/DNA repair protein RadA
* * ÷ USA300TCH1516_ALE 605056 605146 91 2 [1] [1] 2 USA300HOU_RS02905 putative epimerase/dehydratase
* * ÷ USA300TCH1516_ALE 610969 611200 232 2 [1] [1] 3 azo1 FMN‑dependent NADPH‑azoreductase
* * ÷ USA300TCH1516_ALE 621138 621230 93 2 [1] [1] 2 sdrE Serine‑aspartate repeat‑containing protein E
* * ÷ USA300TCH1516_ALE 630355 630374 20 2 [1] [1] 2 hxlB 3‑hexulose‑6‑phosphate isomerase
* * ÷ USA300TCH1516_ALE 645901 645966 66 2 [1] [1] 2 lipL Octanoyl‑[GcvH]:protein N‑octanoyltransferase
* * ÷ USA300TCH1516_ALE 651012 651110 99 2 [1] [1] 2 rclA putative pyridine nucleotide‑disulfide oxidoreductase RclA
* * ÷ USA300TCH1516_ALE 655702 655803 102 2 [1] [1] 2 USA300HOU_RS03130 hypothetical protein
* * ÷ USA300TCH1516_ALE 672660 672784 125 2 [1] [1] 2 [btuF] [btuF]
* * ÷ USA300TCH1516_ALE 675175 675204 30 2 [1] [1] 2 hdl IVa (S)‑2‑haloacid dehalogenase 4A
* * ÷ USA300TCH1516_ALE 678202 678232 31 2 [1] [0] 2 pip Proline iminopeptidase
* * ÷ USA300TCH1516_ALE 697028 697099 72 2 [1] [0] 2 mrpA Na(+)/H(+) antiporter subunit A
* * ÷ USA300TCH1516_ALE 706952 707045 94 2 [1] [1] 2 mntB Manganese transport system membrane protein MntB
* * ÷ USA300TCH1516_ALE 707394 707466 73 2 [1] [1] 2 znuC_1 High‑affinity zinc uptake system ATP‑binding protein ZnuC
* * ÷ USA300TCH1516_ALE 720417 720431 15 2 [1] [1] 2 nupG/USA300HOU_RS03495 Purine nucleoside transport protein NupG/hypothetical protein
* * ÷ USA300TCH1516_ALE 728301 728464 164 2 [1] [1] 2 USA300HOU_RS03535 hypothetical protein
* * ÷ USA300TCH1516_ALE 736629 736772 144 2 [1] [1] 2 bceB_1 Bacitracin export permease protein BceB
* * ÷ USA300TCH1516_ALE 739065 739238 174 2 [1] [1] 2 pitA_1 Low‑affinity inorganic phosphate transporter 1
* * ÷ USA300TCH1516_ALE 744986 745051 66 2 [1] [1] 2 [USA300TCH1516_00678] [USA300TCH1516_00678]
* * ÷ USA300TCH1516_ALE 754591 754628 38 2 [1] [1] 2 USA300HOU_RS03685 hypothetical protein
* * ÷ USA300TCH1516_ALE 763275 763308 34 2 [1] [1] 2 USA300HOU_RS03725/ybhI hypothetical protein/Inner membrane protein YbhI
* * ÷ USA300TCH1516_ALE 791680 791737 58 2 [1] [1] 2 ltaS Lipoteichoic acid synthase
* * ÷ USA300TCH1516_ALE 792962 793005 44 2 [1] [0] 2 ltaS/ettA Lipoteichoic acid synthase/Energy‑dependent translational throttle protein EttA
* * ÷ USA300TCH1516_ALE 801859 802027 169 2 [1] [1] 2 USA300HOU_RS03915/USA300HOU_RS03920 Putative 5'(3')‑deoxyribonucleotidase/Putative lipid kinase
* * ÷ USA300TCH1516_ALE 803291 803363 73 2 [1] [1] 2 [USA300HOU_RS03920] [USA300HOU_RS03920]
* * ÷ USA300TCH1516_ALE 838217 838304 88 2 [1] [1] 2 uvrB UvrABC system protein B
* * ÷ USA300TCH1516_ALE 844619 844755 137 2 [1] [1] 2 lgt Prolipoprotein diacylglyceryl transferase
* * ÷ USA300TCH1516_ALE 851001 851027 27 2 [1] [1] 2 whiA Putative sporulation transcription regulator WhiA
* * ÷ USA300TCH1516_ALE 857747 857918 172 2 [1] [1] 2 gapA1 Glyceraldehyde‑3‑phosphate dehydrogenase 1
* * ÷ USA300TCH1516_ALE 858093 858169 77 2 [1] [1] 2 gapA1 Glyceraldehyde‑3‑phosphate dehydrogenase 1
* * ÷ USA300TCH1516_ALE 864350 864468 119 2 [1] [1] 2 secG putative protein‑export membrane protein SecG
* * ÷ USA300TCH1516_ALE 864666 864850 185 2 [1] [1] 2 [est_2] [est_2]
* * ÷ USA300TCH1516_ALE 866020 866077 58 2 [1] [1] 2 rnr Ribonuclease R
* * ÷ USA300TCH1516_ALE 872029 872057 29 2 [1] [1] 2 USA300HOU_RS04260 hypothetical protein
* * ÷ USA300TCH1516_ALE 884532 884627 96 2 [1] [1] 2 [USA300HOU_RS04330] [USA300HOU_RS04330]
* * ÷ USA300TCH1516_ALE 886513 886577 65 2 [0] [1] 2 USA300HOU_RS04345 hypothetical protein
* * ÷ USA300TCH1516_ALE 887131 887220 90 2 [1] [1] 2 USA300HOU_RS04350 Organic hydroperoxide resistance protein‑like protein
* * ÷ USA300TCH1516_ALE 897087 897184 98 2 [1] [1] 2 [Int‑Tn_1] [Int‑Tn_1]
* * ÷ USA300TCH1516_ALE 899273 899438 166 2 [1] [1] 2 USA300HOU_RS04440 hypothetical protein
* * ÷ USA300TCH1516_ALE 911241 911304 64 2 [1] [1] 2 USA300HOU_RS04510 hypothetical protein
* * ÷ USA300TCH1516_ALE 914331 914395 65 3 [1] [1] 2 csd putative cysteine desulfurase
* * ÷ USA300TCH1516_ALE 915843 915891 49 2 [1] [1] 2 [sufB_2] [sufB_2]
* * ÷ USA300TCH1516_ALE 919267 919306 40 2 [0] [1] 2 [tlyC]–[USA300HOU_RS04555] [tlyC],[USA300HOU_RS04555]
* * ÷ USA300TCH1516_ALE 925221 925255 35 2 [1] [1] 2 USA300HOU_RS04590 hypothetical protein
* * ÷ USA300TCH1516_ALE 927816 927900 85 2 [1] [1] 2 ghrB_1/USA300HOU_RS04615 Glyoxylate/hydroxypyruvate reductase B/hypothetical protein
* * ÷ USA300TCH1516_ALE 935487 935554 68 2 [1] [1] 2 erpA/USA300HOU_RS04665 Iron‑sulfur cluster insertion protein ErpA/NADH dehydrogenase‑like protein
* * ÷ USA300TCH1516_ALE 944782 944869 88 2 [1] [1] 2 mnhD1_2 Na(+)/H(+) antiporter subunit D1
* * ÷ USA300TCH1516_ALE 947951 948007 57 2 [1] [1] 2 mnhA1 Na(+)/H(+) antiporter subunit A1
* * ÷ USA300TCH1516_ALE 949717 949783 67 2 [1] [1] 2 yugI_2 General stress protein 13
* * ÷ USA300TCH1516_ALE 954806 954918 113 2 [1] [1] 2 [glpQ_1] [glpQ_1]
* * ÷ USA300TCH1516_ALE 959613 959671 59 2 [1] [1] 2 pgi Glucose‑6‑phosphate isomerase
* * ÷ USA300TCH1516_ALE 960201 960299 99 2 [1] [1] 2 [pgi] [pgi]
* * ÷ USA300TCH1516_ALE 979958 980021 64 2 [1] [0] 2 ampR HTH‑type transcriptional activator AmpR
* * ÷ USA300TCH1516_ALE 987551 987644 94 2 [1] [1] 3 USA300HOU_RS04885 hypothetical protein
* * ÷ USA300TCH1516_ALE 995112 995301 190 2 [1] [1] 2 appA Oligopeptide‑binding protein AppA
* * ÷ USA300TCH1516_ALE 1012746 1012837 92 2 [1] [1] 2 gerN Na(+)/H(+)‑K(+) antiporter GerN
* * ÷ USA300TCH1516_ALE 1016718 1016760 43 2 [1] [1] 2 acp Sodium/proton‑dependent alanine carrier protein
* * ÷ USA300TCH1516_ALE 1020360 1020408 49 2 [1] [1] 2 ltaA putative glycolipid permease LtaA
* * ÷ USA300TCH1516_ALE 1033291 1033421 131 2 [1] [1] 2 comK Competence transcription factor
* * ÷ USA300TCH1516_ALE 1034921 1034955 35 2 [1] [1] 2 USA300TCH1516_00961 Lipoate‑‑protein ligase 1
* * ÷ USA300TCH1516_ALE 1038631 1038686 56 2 [1] [1] 2 USA300TCH1516_00964 hypothetical protein
* * ÷ USA300TCH1516_ALE 1046934 1047034 101 2 [1] [1] 2 [pchA] [pchA]
* * ÷ USA300TCH1516_ALE 1056027 1056093 67 2 [1] [0] 2 patA_2 Putative N‑acetyl‑LL‑diaminopimelate aminotransferase
* * ÷ USA300TCH1516_ALE 1057947 1058000 54 2 [1] [1] 2 [slyA_2] [slyA_2]
* * ÷ USA300TCH1516_ALE 1078164 1078256 93 2 [1] [1] 2 purL Phosphoribosylformylglycinamidine synthase subunit PurL
* * ÷ USA300TCH1516_ALE 1089822 1089872 51 2 [1] [1] 2 [USA300HOU_RS05380] [USA300HOU_RS05380]
* * ÷ USA300TCH1516_ALE 1094919 1095043 125 2 [1] [1] 2 ythA Putative cytochrome bd menaquinol oxidase subunit I
* * ÷ USA300TCH1516_ALE 1100546 1100609 64 2 [1] [1] 2 USA300HOU_RS05435/def hypothetical protein/Peptide deformylase
* * ÷ USA300TCH1516_ALE 1103292 1103322 31 2 [1] [1] 2 pdhA Pyruvate dehydrogenase E1 component subunit alpha
* * ÷ USA300TCH1516_ALE 1108301 1108355 55 2 [1] [1] 2 puuR HTH‑type transcriptional regulator PuuR
* * ÷ USA300TCH1516_ALE 1114592 1114634 43 2 [1] [1] 2 mntH_1 Divalent metal cation transporter MntH
* * ÷ USA300TCH1516_ALE 1123016 1123152 137 2 [1] [1] 2 cfiB_1 2‑oxoglutarate carboxylase small subunit
* * ÷ USA300TCH1516_ALE 1124759 1124811 53 2 [1] [1] 2 cfiB_1 2‑oxoglutarate carboxylase small subunit
* * ÷ USA300TCH1516_ALE 1129667 1129753 87 2 [1] [1] 2 USA300HOU_RS05585 hypothetical protein
* * ÷ USA300TCH1516_ALE 1131282 1131370 89 2 [1] [1] 2 glpQ1 putative glycerophosphodiester phosphodiesterase 1
* * ÷ USA300TCH1516_ALE 1133343 1133473 131 2 [1] [1] 2 rsmD Ribosomal RNA small subunit methyltransferase D
* * ÷ USA300TCH1516_ALE 1133588 1133758 171 2 [1] [1] 2 coaD Phosphopantetheine adenylyltransferase
* * ÷ USA300TCH1516_ALE 1135796 1135824 29 2 [1] [1] 2 USA300TCH1516_01057 hypothetical protein
* * ÷ USA300TCH1516_ALE 1137080 1137201 122 2 [1] [0] 2 isdB Iron‑regulated surface determinant protein B
* * ÷ USA300TCH1516_ALE 1137454 1137524 71 2 [0] [1] 2 isdB Iron‑regulated surface determinant protein B
* * ÷ USA300TCH1516_ALE 1138018 1138091 74 2 [1] [0] 2 isdB Iron‑regulated surface determinant protein B
* * ÷ USA300TCH1516_ALE 1139425 1139585 161 2 [1] [1] 2 [isdA] [isdA]
* * ÷ USA300TCH1516_ALE 1147547 1147611 65 2 [1] [1] 2 pheT_1 Phenylalanine‑‑tRNA ligase beta subunit
* * ÷ USA300TCH1516_ALE 1151273 1151333 61 2 [1] [1] 2 USA300HOU_RS05710 hypothetical protein
* * ÷ USA300TCH1516_ALE 1153178 1153250 73 2 [1] [1] 2 polX DNA polymerase/3'‑5' exonuclease PolX
* * ÷ USA300TCH1516_ALE 1164252 1164368 117 2 [1] [1] 3 USA300HOU_RS05765/fib_1 Putative metallophosphoesterase MG207/Fibrinogen‑binding protein
* * ÷ USA300TCH1516_ALE 1168111 1168139 29 3 [1] [1] 2 scn_2 Staphylococcal complement inhibitor
* * ÷ USA300TCH1516_ALE 1172037 1172082 46 2 [0] [1] 2 USA300HOU_RS05830 hypothetical protein
* * ÷ USA300TCH1516_ALE 1179814 1179972 159 2 [1] [1] 2 USA300HOU_RS05875/USA300HOU_RS05880 hypothetical protein/hypothetical protein
* * ÷ USA300TCH1516_ALE 1192171 1192428 258 2 [1] [1] 2 murD UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
* * ÷ USA300TCH1516_ALE 1210124 1210204 81 2 [1] [1] 2 pyrB Aspartate carbamoyltransferase
* * ÷ USA300TCH1516_ALE 1216585 1216660 76 2 [1] [1] 2 pyrF Orotidine 5'‑phosphate decarboxylase
* * ÷ USA300TCH1516_ALE 1217828 1217934 107 2 [1] [1] 2 USA300HOU_RS06060/USA300HOU_RS06065 hypothetical protein/hypothetical protein
* * ÷ USA300TCH1516_ALE 1220993 1221205 213 2 [1] [1] 2 gmk Guanylate kinase
* * ÷ USA300TCH1516_ALE 1243450 1243541 92 2 [1] [1] 2 plsX Phosphate acyltransferase
* * ÷ USA300TCH1516_ALE 1249157 1249214 58 2 [1] [1] 3 smc_2 Chromosome partition protein Smc
* * ÷ USA300TCH1516_ALE 1252217 1252245 29 2 [1] [1] 2 ffh Signal recognition particle protein
* * ÷ USA300TCH1516_ALE 1254222 1254264 43 2 [1] [0] 2 rimM Ribosome maturation factor RimM
* * ÷ USA300TCH1516_ALE 1259647 1259737 91 2 [1] [1] 2 rbgA Ribosome biogenesis GTPase A
* * ÷ USA300TCH1516_ALE 1259978 1260189 212 2 [1] [1] 2 rnhB Ribonuclease HII
* * ÷ USA300TCH1516_ALE 1260446 1260562 117 2 [1] [1] 2 rnhB Ribonuclease HII
* * ÷ USA300TCH1516_ALE 1261244 1261258 15 2 [1] [0] 2 sucC Succinate‑‑CoA ligase [ADP‑forming] subunit beta
* * ÷ USA300TCH1516_ALE 1263588 1263650 63 2 [1] [1] 2 lytN_1 putative cell wall hydrolase LytN
* * ÷ USA300TCH1516_ALE 1263802 1263930 129 2 [1] [1] 2 lytN_1 putative cell wall hydrolase LytN
* * ÷ USA300TCH1516_ALE 1264139 1264179 41 2 [1] [1] 2 lytN_1 putative cell wall hydrolase LytN
* * ÷ USA300TCH1516_ALE 1271469 1271512 44 2 [1] [1] 2 xerC_1 Tyrosine recombinase XerC
* * ÷ USA300TCH1516_ALE 1274365 1274545 181 2 [1] [1] 2 [codY] [codY]
* * ÷ USA300TCH1516_ALE 1290797 1290851 55 2 [1] [1] 2 infB Translation initiation factor IF‑2
* * ÷ USA300TCH1516_ALE 1292532 1292608 77 2 [1] [1] 2 infB/rbfA Translation initiation factor IF‑2/Ribosome‑binding factor A
* * ÷ USA300TCH1516_ALE 1298691 1298765 75 2 [1] [1] 2 rnj2 Ribonuclease J 2
* * ÷ USA300TCH1516_ALE 1303316 1303327 12 2 [1] [1] 2 phnF putative transcriptional regulator PhnF
* * ÷ USA300TCH1516_ALE 1307827 1307883 57 2 [1] [1] 2 rodZ Cytoskeleton protein RodZ
* * ÷ USA300TCH1516_ALE 1311666 1311683 18 2 [0] [1] 3 rny_1 Ribonuclease Y
* * ÷ USA300TCH1516_ALE 1319266 1319303 38 2 [1] [1] 2 miaB tRNA‑2‑methylthio‑N(6)‑dimethylallyladenosine synthase
* * ÷ USA300TCH1516_ALE 1324675 1324712 38 2 [1] [1] 2 mutL DNA mismatch repair protein MutL
* * ÷ USA300TCH1516_ALE 1328755 1328853 99 2 [1] [1] 2 [glpD] [glpD]
* * ÷ USA300TCH1516_ALE 1331419 1331464 46 2 [1] [1] 2 USA300HOU_RS06555 Monoacylglycerol lipase
* * ÷ USA300TCH1516_ALE 1335434 1335573 140 2 [1] [1] 2 mgl L‑methionine gamma‑lyase
* * ÷ USA300TCH1516_ALE 1336196 1336326 131 2 [1] [1] 2 mgl/glnR L‑methionine gamma‑lyase/HTH‑type transcriptional regulator GlnR
* * ÷ USA300TCH1516_ALE 1338957 1339018 62 2 [1] [1] 2 glnA/USA300TCH1516_01240 Glutamine synthetase/hypothetical protein
* * ÷ USA300TCH1516_ALE 1343202 1343281 80 2 [1] [1] 2 [USA300HOU_RS06635] [USA300HOU_RS06635]
* * ÷ USA300TCH1516_ALE 1344148 1344211 64 2 [1] [1] 2 USA300HOU_RS06660 hypothetical protein
* * ÷ USA300TCH1516_ALE 1346251 1346302 52 2 [1] [1] 2 USA300HOU_RS06685/ltaE hypothetical protein/Low specificity L‑threonine aldolase
* * ÷ USA300TCH1516_ALE 1356302 1356396 95 2 [1] [1] 2 yclM Aspartokinase 3
* * ÷ USA300TCH1516_ALE 1356538 1356644 107 2 [1] [1] 3 yclM Aspartokinase 3
* * ÷ USA300TCH1516_ALE 1366556 1366697 142 2 [1] [1] 2 [guaC] [guaC]
* * ÷ USA300TCH1516_ALE 1367463 1367636 174 2 [1] [1] 2 [guaC] [guaC]
* * ÷ USA300TCH1516_ALE 1369061 1369118 58 2 [1] [1] 3 lexA_1 LexA repressor
* * ÷ USA300TCH1516_ALE 1369429 1369449 21 2 [1] [1] 2 lexA_1 LexA repressor
* * ÷ USA300TCH1516_ALE 1380772 1381350 579 2 [1] [1] 2 [acnA] [acnA]
* * ÷ USA300TCH1516_ALE 1383000 1383109 110 2 [1] [1] 3 acnA Aconitate hydratase A
* * ÷ USA300TCH1516_ALE 1383353 1383394 42 2 [1] [1] 2 acnA Aconitate hydratase A
* * ÷ USA300TCH1516_ALE 1390161 1390391 231 2 [1] [1] 2 parC DNA topoisomerase 4 subunit A
* * ÷ USA300TCH1516_ALE 1408515 1408689 175 2 [1] [1] 2 trpF N‑(5'‑phosphoribosyl)anthranilate isomerase
* * ÷ USA300TCH1516_ALE 1417095 1417219 125 2 [1] [1] 2 gsiD_3 Glutathione transport system permease protein GsiD
* * ÷ USA300TCH1516_ALE 1419276 1419342 67 2 [1] [1] 2 USA300HOU_RS07040 hypothetical protein
* * ÷ USA300TCH1516_ALE 1422339 1422505 167 2 [1] [1] 2 [phoU]–[pstB3] [phoU],[pstB3]
* * ÷ USA300TCH1516_ALE 1425215 1425296 82 2 [1] [1] 2 [pstS] [pstS]
* * ÷ USA300TCH1516_ALE 1428156 1428223 68 2 [1] [1] 2 cvfB/ybiT Conserved virulence factor B/putative ABC transporter ATP‑binding protein YbiT
* * ÷ USA300TCH1516_ALE 1434892 1434974 83 2 [1] [1] 2 dapH 2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑acetyltransferase
* * ÷ USA300TCH1516_ALE 1453597 1453706 110 2 [1] [1] 2 odhA 2‑oxoglutarate dehydrogenase E1 component
* * ÷ USA300TCH1516_ALE 1457857 1457882 26 2 [1] [1] 2 ybjG Putative undecaprenyl‑diphosphatase YbjG
* * ÷ USA300TCH1516_ALE 1463901 1463957 57 2 [1] [1] 2 USA300HOU_RS07285 DegV domain‑containing protein
* * ÷ USA300TCH1516_ALE 1464561 1464668 108 2 [1] [1] 2 [USA300HOU_RS07285] [USA300HOU_RS07285]
* * ÷ USA300TCH1516_ALE 1486225 1486274 50 2 [1] [1] 2 ebh_1 Extracellular matrix‑binding protein ebh
* * ÷ USA300TCH1516_ALE 1486628 1486663 36 2 [1] [1] 2 ebh_1 Extracellular matrix‑binding protein ebh
* * ÷ USA300TCH1516_ALE 1512947 1513040 94 2 [1] [1] 2 USA300HOU_RS07375 hypothetical protein
* * ÷ USA300TCH1516_ALE 1516518 1516603 86 2 [1] [1] 3 gpsB Cell cycle protein GpsB
* * ÷ USA300TCH1516_ALE 1526796 1526982 187 2 [1] [1] 2 dinG_1 putative ATP‑dependent helicase DinG
* * ÷ USA300TCH1516_ALE 1530186 1530219 34 2 [1] [1] 2 bshA N‑acetyl‑alpha‑D‑glucosaminyl L‑malate synthase
* * ÷ USA300TCH1516_ALE 1534060 1534071 12 2 [0] [1] 3 USA300HOU_RS07480 hypothetical protein
* * ÷ USA300TCH1516_ALE 1537322 1537367 46 2 [1] [1] 2 aroB 3‑dehydroquinate synthase
* * ÷ USA300TCH1516_ALE 1564073 1564136 64 2 [0] [1] 2 USA300HOU_RS07660 hypothetical protein
* * ÷ USA300TCH1516_ALE 1565625 1565665 41 2 [1] [1] 2 USA300HOU_RS07680 hypothetical protein
* * ÷ USA300TCH1516_ALE 1573790 1573830 41 2 [1] [1] 2 USA300HOU_RS07705 Glycyl‑glycine endopeptidase ALE‑1
* * ÷ USA300TCH1516_ALE 1574104 1574210 107 2 [1] [1] 2 USA300HOU_RS07705 Glycyl‑glycine endopeptidase ALE‑1
* * ÷ USA300TCH1516_ALE 1580338 1580378 41 2 [1] [1] 2 USA300HOU_RS07740 hypothetical protein
* * ÷ USA300TCH1516_ALE 1588686 1588755 70 3 [1] [1] 2 [USA300HOU_RS07790] [USA300HOU_RS07790]
* * ÷ USA300TCH1516_ALE 1597380 1597607 228 2 [1] [1] 2 USA300HOU_RS07875 hypothetical protein
* * ÷ USA300TCH1516_ALE 1597749 1597805 57 2 [1] [1] 2 USA300HOU_RS07875 hypothetical protein
* * ÷ USA300TCH1516_ALE 1597920 1597965 46 2 [1] [1] 2 [USA300HOU_RS07875]–[USA300HOU_RS07880] [USA300HOU_RS07875],[USA300HOU_RS07880]
* * ÷ USA300TCH1516_ALE 1600555 1600640 86 2 [1] [1] 2 [USA300HOU_RS07910] [USA300HOU_RS07910]
* * ÷ USA300TCH1516_ALE 1607820 1607979 160 3 [1] [1] 2 [frc]–[USA300HOU_RS07970] [frc],[USA300HOU_RS07970]
* * ÷ USA300TCH1516_ALE 1608841 1609091 251 2 [1] [1] 2 [USA300HOU_RS07970] [USA300HOU_RS07970]
* * ÷ USA300TCH1516_ALE 1614455 1614491 37 2 [0] [1] 2 xerD_3 Tyrosine recombinase XerD
* * ÷ USA300TCH1516_ALE 1615837 1615865 29 2 [1] [0] 3 fur/nudF Ferric uptake regulation protein/ADP‑ribose pyrophosphatase
* * ÷ USA300TCH1516_ALE 1621367 1621378 12 2 [1] [1] 2 zwf Glucose‑6‑phosphate 1‑dehydrogenase
* * ÷ USA300TCH1516_ALE 1627440 1627485 46 2 [1] [1] 2 gnd 6‑phosphogluconate dehydrogenase, decarboxylating
* * ÷ USA300TCH1516_ALE 1628561 1628610 50 2 [0] [0] 2 pepT_2 Peptidase T
* * ÷ USA300TCH1516_ALE 1628752 1628847 96 3 [1] [1] 2 pepT_2 Peptidase T
* * ÷ USA300TCH1516_ALE 1636558 1636712 155 2 [1] [1] 2 USA300HOU_RS08115 Dihydrolipoyl dehydrogenase
* * ÷ USA300TCH1516_ALE 1637361 1637449 89 2 [0] [1] 2 recN DNA repair protein RecN
* * ÷ USA300TCH1516_ALE 1640157 1640197 41 2 [1] [1] 2 USA300HOU_RS08130 Farnesyl diphosphate synthase
* * ÷ USA300TCH1516_ALE 1647579 1647665 87 2 [1] [1] 2 [lipM] [lipM]
* * ÷ USA300TCH1516_ALE 1662310 1662366 57 2 [1] [1] 2 [pbpH] [pbpH]
* * ÷ USA300TCH1516_ALE 1671314 1671372 59 2 [0] [1] 2 trmK tRNA (adenine(22)‑N(1))‑methyltransferase
* * ÷ USA300TCH1516_ALE 1686541 1686674 134 2 [1] [1] 2 mtaB Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
* * ÷ USA300TCH1516_ALE 1689396 1689446 51 3 [1] [1] 3 dnaJ Chaperone protein DnaJ
* * ÷ USA300TCH1516_ALE 1693599 1693671 73 2 [1] [1] 2 [hemN_1] [hemN_1]
* * ÷ USA300TCH1516_ALE 1698283 1698391 109 3 [1] [1] 2 USA300HOU_RS08460 hypothetical protein
* * ÷ USA300TCH1516_ALE 1708503 1708698 196 2 [1] [1] 2 [USA300HOU_RS08530] [USA300HOU_RS08530]
* * ÷ USA300TCH1516_ALE 1709709 1709798 90 3 [1] [1] 2 entA_3/fic Enterotoxin type A/Adenosine monophosphate‑protein transferase SoFic
* * ÷ USA300TCH1516_ALE 1710132 1710259 128 2 [1] [1] 2 fic Adenosine monophosphate‑protein transferase SoFic
* * ÷ USA300TCH1516_ALE 1722421 1722436 16 2 [1] [1] 2 USA300HOU_RS08610 hypothetical protein
* * ÷ USA300TCH1516_ALE 1730734 1730777 44 2 [0] [1] 2 iscS_1 Cysteine desulfurase IscS
* * ÷ USA300TCH1516_ALE 1731081 1731145 65 2 [1] [1] 2 iscS_1 Cysteine desulfurase IscS
* * ÷ USA300TCH1516_ALE 1738464 1738704 241 2 [1] [1] 2 [hisS] [hisS]
* * ÷ USA300TCH1516_ALE 1740141 1740212 72 2 [1] [1] 2 [lytC] [lytC]
* * ÷ USA300TCH1516_ALE 1741018 1741365 348 2 [1] [1] 2 [lytC]–[dtd] [lytC],[dtd]
* * ÷ USA300TCH1516_ALE 1742463 1742538 76 2 [1] [0] 2 relA GTP pyrophosphokinase
* * ÷ USA300TCH1516_ALE 1743691 1743721 31 2 [1] [1] 2 relA GTP pyrophosphokinase
* * ÷ USA300TCH1516_ALE 1759892 1760062 171 2 [1] [1] 2 [USA300HOU_RS08785] [USA300HOU_RS08785]
* * ÷ USA300TCH1516_ALE 1762854 1762951 98 2 [1] [1] 2 fpgS Folylpolyglutamate synthase
* * ÷ USA300TCH1516_ALE 1772796 1772968 173 2 [1] [1] 2 [USA300HOU_RS08850]–[hemA] [USA300HOU_RS08850],[hemA]
* * ÷ USA300TCH1516_ALE 1774551 1774583 33 2 [1] [1] 2 engB putative GTP‑binding protein EngB
* * ÷ USA300TCH1516_ALE 1778458 1778635 178 2 [1] [1] 2 USA300TCH1516_01663 hypothetical protein
* * ÷ USA300TCH1516_ALE 1794518 1794554 37 2 [1] [1] 2 USA300HOU_RS08960 hypothetical protein
* * ÷ USA300TCH1516_ALE 1797520 1797566 47 2 [1] [1] 2 phoR Alkaline phosphatase synthesis sensor protein PhoR
* * ÷ USA300TCH1516_ALE 1813307 1813400 94 2 [1] [1] 2 dnaE DNA polymerase III subunit alpha
* * ÷ USA300TCH1516_ALE 1823682 1823765 84 2 [1] [1] 2 ackA Acetate kinase
* * ÷ USA300TCH1516_ALE 1824765 1824848 84 2 [1] [1] 2 USA300HOU_RS09080 hypothetical protein
* * ÷ USA300TCH1516_ALE 1844689 1844745 57 2 [1] [1] 2 mrcA/isdH Penicillin‑binding protein 1A/Iron‑regulated surface determinant protein H
* * ÷ USA300TCH1516_ALE 1844887 1845007 121 2 [1] [1] 2 isdH Iron‑regulated surface determinant protein H
* * ÷ USA300TCH1516_ALE 1856435 1856465 31 2 [0] [1] 2 aroF/USA300HOU_RS09235 Phospho‑2‑dehydro‑3‑deoxyheptonate aldolase/hypothetical protein
* * ÷ USA300TCH1516_ALE 1865306 1865360 55 2 [1] [1] 2 USA300HOU_RS09260 hypothetical protein
* * ÷ USA300TCH1516_ALE 1876063 1876177 115 2 [1] [1] 2 murJ_2 Lipid II flippase MurJ
* * ÷ USA300TCH1516_ALE 1876292 1876489 198 2 [1] [1] 2 murJ_2 Lipid II flippase MurJ
* * ÷ USA300TCH1516_ALE 1882791 1883047 257 2 [1] [1] 2 ebh_2 Extracellular matrix‑binding protein ebh
* * ÷ USA300TCH1516_ALE 1888383 1888585 203 2 [1] [1] 2 [mdtH] [mdtH]
* * ÷ USA300TCH1516_ALE 1889376 1889450 75 2 [1] [1] 2 mdtH Multidrug resistance protein MdtH
* * ÷ USA300TCH1516_ALE 1892499 1892554 56 2 [1] [1] 2 USA300TCH1516_01749 hypothetical protein
* * ÷ USA300TCH1516_ALE 1896179 1896364 186 2 [1] [1] 2 ribBA Riboflavin biosynthesis protein RibBA
* * ÷ USA300TCH1516_ALE 1909237 1909414 178 2 [1] [1] 2 USA300HOU_RS09460 hypothetical protein
* * ÷ USA300TCH1516_ALE 1910799–1910847 1910961–1910879 33–163 2 [1] [1] 2 crcB_2/USA300TCH1516_01771 Putative fluoride ion transporter CrcB/hypothetical protein
* * ÷ USA300TCH1516_ALE 1913310 1913436 127 2 [1] [1] 2 [yvgN] [yvgN]
* * ÷ USA300TCH1516_ALE 1915881 1916062 182 2 [1] [1] 2 metK/pckA S‑adenosylmethionine synthase/Phosphoenolpyruvate carboxykinase (ATP)
* * ÷ USA300TCH1516_ALE 1921895 1921963 69 2 [1] [1] 2 menE 2‑succinylbenzoate‑‑CoA ligase
* * ÷ USA300TCH1516_ALE 1926530 1926635 106 2 [1] [1] 2 [USA300HOU_RS09555] [USA300HOU_RS09555]
* * ÷ USA300TCH1516_ALE 1932292 1932429 138 2 [1] [1] 3 USA300HOU_RS09605 hypothetical protein
* * ÷ USA300TCH1516_ALE 1946079 1946161 83 3 [1] [1] 2 USA300HOU_RS09665/USA300HOU_RS15380 hypothetical protein/hypothetical protein
* * ÷ USA300TCH1516_ALE 1953708 1953812 105 2 [1] [1] 2 nisB Nisin biosynthesis protein NisB
* * ÷ USA300TCH1516_ALE 1986007 1986054 48 2 [1] [1] 2 fumC Fumarate hydratase class II
* * ÷ USA300TCH1516_ALE 1986540 1986603 64 3 [1] [0] 2 [USA300HOU_RS09895] [USA300HOU_RS09895]
* * ÷ USA300TCH1516_ALE 1988768 1988872 105 2 [1] [1] 2 trmL tRNA (cytidine(34)‑2'‑O)‑methyltransferase
* * ÷ USA300TCH1516_ALE 2005129 2005164 36 2 [0] [1] 2 ghrB_2 Glyoxylate/hydroxypyruvate reductase B
* * ÷ USA300TCH1516_ALE 2009701 2009754 54 2 [1] [1] 2 USA300HOU_RS10125 Putative multidrug export ATP‑binding/permease protein
* * ÷ USA300TCH1516_ALE 2010185 2010217 33 2 [1] [1] 2 USA300HOU_RS10125 Putative multidrug export ATP‑binding/permease protein
* * ÷ USA300TCH1516_ALE 2020626 2020785 160 2 [1] [1] 2 queE_2 7‑carboxy‑7‑deazaguanine synthase
* * ÷ USA300TCH1516_ALE 2020927 2021071 145 2 [1] [1] 2 queE_2 7‑carboxy‑7‑deazaguanine synthase
* * ÷ USA300TCH1516_ALE 2021805 2021964 160 2 [1] [1] 2 USA300HOU_RS10190 putative acyl‑CoA thioester hydrolase
* * ÷ USA300TCH1516_ALE 2024893 2024917 25 2 [1] [1] 2 USA300HOU_RS10210/USA300HOU_RS10215 hypothetical protein/hypothetical protein
* * ÷ USA300TCH1516_ALE 2035810 2035893 84 2 [1] [0] 2 [polC_2] [polC_2]
* * ÷ USA300TCH1516_ALE 2036035 2036118 84 2 [0] [1] 2 polC_2 DNA polymerase III PolC‑type
* * ÷ USA300TCH1516_ALE 2036684 2036758 75 2 [1] [1] 2 dinB DNA polymerase IV
* * ÷ USA300TCH1516_ALE 2054991 2055083 93 2 [1] [1] 2 purB/sspP Adenylosuccinate lyase/Staphopain A
* * ÷ USA300TCH1516_ALE 2059386 2059441 56 2 [1] [1] 2 pncB2 Nicotinate phosphoribosyltransferase pncB2
* * ÷ USA300TCH1516_ALE 2061578 2061666 89 2 [1] [1] 2 nos Nitric oxide synthase oxygenase
* * ÷ USA300TCH1516_ALE 2061808 2061908 101 2 [1] [1] 2 nos Nitric oxide synthase oxygenase
* * ÷ USA300TCH1516_ALE 2069073 2069113 41 2 [1] [1] 2 mdlD NAD(P)‑dependent benzaldehyde dehydrogenase
* * ÷ USA300TCH1516_ALE 2069445 2069481 37 2 [1] [1] 2 mdlD NAD(P)‑dependent benzaldehyde dehydrogenase
* * ÷ USA300TCH1516_ALE 2077131 2077204 74 2 [1] [1] 2 USA300HOU_RS10480 hypothetical protein
* * ÷ USA300TCH1516_ALE 2086748 2086828 81 2 [1] [1] 2 scn_3 Staphylococcal complement inhibitor
* * ÷ USA300TCH1516_ALE 2109708 2109809 102 2 [1] [1] 3 USA300HOU_RS10675 hypothetical protein
* * ÷ USA300TCH1516_ALE 2118920 2119003 84 2 [1] [1] 2 smc_4 Chromosome partition protein Smc
* * ÷ USA300TCH1516_ALE 2124911 2124978 68 2 [1] [1] 2 dinG_2 putative ATP‑dependent helicase DinG
* * ÷ USA300TCH1516_ALE 2130421 2130439 19 2 [1] [1] 2 [USA300HOU_RS10870] [USA300HOU_RS10870]
* * ÷ USA300TCH1516_ALE 2144825 2144936 112 2 [1] [1] 2 [USA300HOU_RS10945] [USA300HOU_RS10945]
* * ÷ USA300TCH1516_ALE 2155963 2155994 32 2 [1] [1] 2 tusA Sulfurtransferase TusA
* * ÷ USA300TCH1516_ALE 2164656 2164716 61 2 [1] [1] 2 tsaE tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
* * ÷ USA300TCH1516_ALE 2170350 2170376 27 2 [1] [1] 2 ilvC Ketol‑acid reductoisomerase (NADP(+))
* * ÷ USA300TCH1516_ALE 2176707–2179431 2181125–2179438 8–4419 2 [1] [1] 2 ilvA/USA300TCH1516_02069 L‑threonine dehydratase biosynthetic IlvA/tRNA‑Gly
* * ÷ USA300TCH1516_ALE 2191553 2191638 86 2 [1] [1] 2 USA300HOU_RS11195 hypothetical protein
* * ÷ USA300TCH1516_ALE 2193898 2194047 150 2 [1] [1] 2 [kdpC]–[kdpB] [kdpC],[kdpB]
* * ÷ USA300TCH1516_ALE 2200519 2200666 148 2 [1] [1] 2 [kdpD]–[kdpE] [kdpD],[kdpE]
* * ÷ USA300TCH1516_ALE 2200808 2200836 29 2 [1] [0] 2 kdpE KDP operon transcriptional regulatory protein KdpE
* * ÷ USA300TCH1516_ALE 2212491 2212532 42 2 [1] [1] 2 yidC Membrane protein insertase YidC
* * ÷ USA300TCH1516_ALE 2214670 2214749 80 2 [1] [1] 2 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
* * ÷ USA300TCH1516_ALE 2231222 2231355 134 2 [1] [1] 2 USA300HOU_RS11415 hypothetical protein
* * ÷ USA300TCH1516_ALE 2264497 2264708 212 2 [1] [1] 2 USA300HOU_RS11590 hypothetical protein
* * ÷ USA300TCH1516_ALE 2267953 2268050 98 2 [1] [1] 2 USA300HOU_RS11605/ywpJ_2 hypothetical protein/Phosphatase YwpJ
* * ÷ USA300TCH1516_ALE 2274772 2275031 260 2 [1] [1] 2 mtlR Transcriptional regulator MtlR
* * ÷ USA300TCH1516_ALE 2299179 2299277 99 2 [1] [1] 2 [salA] [salA]
* * ÷ USA300TCH1516_ALE 2299862 2299975 114 2 [1] [1] 2 emrY putative multidrug resistance protein EmrY
* * ÷ USA300TCH1516_ALE 2310610 2310652 43 2 [1] [1] 2 yfmC_2 Fe(3+)‑citrate‑binding protein YfmC
* * ÷ USA300TCH1516_ALE 2316903 2316973 71 2 [0] [1] 2 iucC_3 Aerobactin synthase
* * ÷ USA300TCH1516_ALE 2324430 2324521 92 2 [0] [1] 2 yfmJ Putative NADP‑dependent oxidoreductase YfmJ
* * ÷ USA300TCH1516_ALE 2348120 2348229 110 2 [1] [1] 2 USA300HOU_RS11980 hypothetical protein
* * ÷ USA300TCH1516_ALE 2355540 2355576 37 2 [1] [1] 2 ecfA2 Energy‑coupling factor transporter ATP‑binding protein EcfA2
* * ÷ USA300TCH1516_ALE 2355846 2355939 94 2 [1] [1] 2 ecfA2 Energy‑coupling factor transporter ATP‑binding protein EcfA2
* * ÷ USA300TCH1516_ALE 2372758 2372812 55 2 [1] [1] 3 pbuG Guanine/hypoxanthine permease PbuG
* * ÷ USA300TCH1516_ALE 2382641 2382677 37 2 [1] [1] 2 swrC Swarming motility protein SwrC
* * ÷ USA300TCH1516_ALE 2389991 2390050 60 2 [1] [1] 2 moaA GTP 3',8‑cyclase
* * ÷ USA300TCH1516_ALE 2406170 2406260 91 2 [1] [1] 2 ureB Urease subunit beta
* * ÷ USA300TCH1516_ALE 2421509 2421568 60 2 [1] [1] 2 USA300HOU_RS12475 Putative 2‑hydroxyacid dehydrogenase
* * ÷ USA300TCH1516_ALE 2447554 2447640 87 2 [1] [1] 2 yxeP_4 putative hydrolase YxeP
* * ÷ USA300TCH1516_ALE 2459778 2459858 81 2 [1] [1] 2 USA300HOU_RS12665 hypothetical protein
* * ÷ USA300TCH1516_ALE 2478750 2478968 219 2 [1] [1] 3 USA300HOU_RS12765 hypothetical protein
* * ÷ USA300TCH1516_ALE 2483910 2483947 38 2 [1] [1] 2 USA300HOU_RS12795 hypothetical protein
* * ÷ USA300TCH1516_ALE 2507562 2507664 103 2 [1] [1] 2 sarZ HTH‑type transcriptional regulator SarZ
* * ÷ USA300TCH1516_ALE 2508087 2508170 84 2 [1] [1] 2 USA300TCH1516_02393 Acid shock protein
* * ÷ USA300TCH1516_ALE 2511470 2511569 100 2 [1] [1] 2 mta HTH‑type transcriptional activator mta
* * ÷ USA300TCH1516_ALE 2525054 2525343 290 2 [1] [1] 2 sirB Sirohydrochlorin ferrochelatase
* * ÷ USA300TCH1516_ALE 2527466 2527499 34 2 [1] [1] 2 [USA300TCH1516_02411] [USA300TCH1516_02411]
* * ÷ USA300TCH1516_ALE 2528562 2528572 11 2 [0] [1] 2 zinT Metal‑binding protein ZinT
* * ÷ USA300TCH1516_ALE 2540122 2540154 33 2 [1] [1] 2 fieF/sbi Ferrous‑iron efflux pump FieF/Immunoglobulin‑binding protein sbi
* * ÷ USA300TCH1516_ALE 2551285 2551377 93 2 [1] [1] 2 bioD1/USA300HOU_RS13150 ATP‑dependent dethiobiotin synthetase BioD 1/putative ABC transporter ATP‑binding protein
* * ÷ USA300TCH1516_ALE 2557742 2557771 30 2 [0] [1] 2 [mapZ] [mapZ]
* * ÷ USA300TCH1516_ALE 2557920 2558039 120 2 [1] [1] 2 mapZ Mid‑cell‑anchored protein Z
* * ÷ USA300TCH1516_ALE 2562155 2562248 94 2 [1] [1] 2 cpdA/cycA_2 3',5'‑cyclic adenosine monophosphate phosphodiesterase CpdA/D‑serine/D‑alanine/glycine transporter
* * ÷ USA300TCH1516_ALE 2578823 2578852 30 2 [1] [1] 2 yveA Aspartate‑proton symporter
* * ÷ USA300TCH1516_ALE 2581539 2581672 134 2 [1] [1] 2 pnbA Para‑nitrobenzyl esterase
* * ÷ USA300TCH1516_ALE 2589902 2589965 64 2 [1] [1] 2 gltB_2 Glutamate synthase [NADPH] large chain
* * ÷ USA300TCH1516_ALE 2597010 2597076 67 2 [1] [1] 2 nikA_2 Nickel‑binding periplasmic protein
* * ÷ USA300TCH1516_ALE 2597218 2597332 115 2 [1] [1] 2 nikA_2 Nickel‑binding periplasmic protein
* * ÷ USA300TCH1516_ALE 2633610 2633644 35 2 [1] [1] 2 fnbA_2 Fibronectin‑binding protein A
* * ÷ USA300TCH1516_ALE 2650927 2651034 108 2 [1] [1] 2 USA300HOU_RS13635 hypothetical protein
* * ÷ USA300TCH1516_ALE 2651580 2651663 84 2 [1] [1] 2 fbp Fructose‑1,6‑bisphosphatase class 3
* * ÷ USA300TCH1516_ALE 2658954 2659012 59 2 [1] [1] 2 USA300HOU_RS13680 Putative NAD(P)H nitroreductase
* * ÷ USA300TCH1516_ALE 2676739 2676813 75 2 [1] [1] 2 cidB Holin‑like protein CidB
* * ÷ USA300TCH1516_ALE 2678019 2678074 56 2 [1] [1] 2 cynR_2 HTH‑type transcriptional regulator CynR
* * ÷ USA300TCH1516_ALE 2679741 2679785 45 2 [1] [1] 2 ssaA2_4 Staphylococcal secretory antigen ssaA2
* * ÷ USA300TCH1516_ALE 2695745 2695856 112 2 [1] [1] 2 USA300HOU_RS13870 Putative acetyltransferase
* * ÷ USA300TCH1516_ALE 2723471 2723476 6 2 [1] [0] 2 feoB_2 Fe(2+) transporter FeoB
* * ÷ USA300TCH1516_ALE 2728886 2728955 70 2 [1] [0] 2 pyrD Dihydroorotate dehydrogenase (quinone)
* * ÷ USA300TCH1516_ALE 2799762 2799821 60 2 [1] [1] 2 USA300HOU_RS14380 hypothetical protein
* * ÷ USA300TCH1516_ALE 2800232 2800261 30 2 [1] [1] 2 USA300HOU_RS14380 hypothetical protein
* * ÷ USA300TCH1516_ALE 2824004 2824066 63 2 [1] [0] 2 ywqD_2 Tyrosine‑protein kinase YwqD
* * ÷ USA300TCH1516_ALE 2837894 2837922 29 2 [1] [1] 2 hisC_2 Histidinol‑phosphate aminotransferase
* * ÷ USA300TCH1516_ALE 2840951 2840988 38 2 [1] [1] 2 [USA300HOU_RS14555] [USA300HOU_RS14555]
* * ÷ USA300TCH1516_ALE 2844229 2844411 183 2 [1] [1] 2 ykoD_2 Putative HMP/thiamine import ATP‑binding protein YkoD
* * ÷ USA300TCH1516_ALE 2850976 2851002 27 2 [0] [1] 2 USA300HOU_RS14605 hypothetical protein
* * ÷ USA300TCH1516_ALE 2852943 2853019 77 2 [1] [1] 2 yflS Putative malate transporter YflS
* * ÷ USA300TCH1516_ALE 2865776 2865812 37 2 [1] [1] 2 [USA300HOU_RS14690] [USA300HOU_RS14690]