mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 310 | (T)9→10 | intergenic (+55/‑27) | thrL → / → thrA | thr operon leader peptide/fused aspartate kinase/homoserine dehydrogenase 1 |
| RA | 11,259 | (T)5→4 | coding (98/714 nt) coding (430/486 nt) |
yaaW ← mbiA → |
putative enzyme‑specific chaperone YaaW uncharacterized protein MbiA |
| RA | 11,649 | A→G | L46L (CTT→CTC) | yaaI ← | DUF2541 domain‑containing protein YaaI |
| RA | 19,070 | T→C | V119A (GTA→GCA) | nhaR → | DNA‑binding transcriptional activator NhaR |
| RA | 29,204 | T→C | intergenic (+9/‑447) | dapB → / → carA | 4‑hydroxy‑tetrahydrodipicolinate reductase/carbamoyl phosphate synthetase subunit alpha |
| RA | 59,338 | C→T | intergenic (+59/+349) | yabQ → / ← rluA | protein YabQ/23S rRNA pseudouridine(746) and tRNA pseudouridine(32) synthase |
| RA | 66,335 | C→T | K72K (AAG→AAA) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| RA | 73,641 | A→G | L294S (TTA→TCA) | thiP ← | thiamine ABC transporter membrane subunit |
| RA | 77,593 | (T)8→9 | noncoding (227/227 nt) | sgrS → | small regulatory RNA SgrS |
| RA | 77,704 | C→T | A28A (GCC→GCT) | setA → | sugar exporter SetA |
| RA | 79,341 | C→A | G38V (GGT→GTT) | leuD ← | 3‑isopropylmalate dehydratase subunit LeuD |
| RA | 91,323 | G→A | E98K (GAA→AAA) | ftsL → | cell division protein FtsL |
| RA | 104,426 | C→T | L149F (CTT→TTT) | ftsA → | cell division protein FtsA |
| RA | 106,233 | T→C | V310A (GTT→GCT) | ftsZ → | cell division protein FtsZ |
| RA | 109,267 | A→G | D330G (GAT→GGT) | secA → | protein translocation ATPase |
| RA | 141,845 | G→A | V139I (GTC→ATC) | hpt → | hypoxanthine phosphoribosyltransferase |
| RA | 147,516 | C→T | R183R (CGC→CGT) | rpnC → | recombination‑promoting nuclease RpnC |
| RA | 150,016 | T→C | Q313R (CAA→CGA) | yadC ← | fimbrial tip‑adhesin YadC |
| RA | 150,562 | A→G | I131T (ATA→ACA) | yadC ← | fimbrial tip‑adhesin YadC |
| RA | 152,807 | (T)5→4 | coding (6/570 nt) | yadM ← | putative fimbrial protein YadM |
| RA | 162,249 | G→A | G49R (GGG→AGG) | hrpB → | putative ATP‑dependent RNA helicase HrpB |
| RA | 163,469 | C→T | G455G (GGC→GGT) | hrpB → | putative ATP‑dependent RNA helicase HrpB |
| RA | 164,352 | C→T | L750L (CTG→TTG) | hrpB → | putative ATP‑dependent RNA helicase HrpB |
| RA | 168,921 | Δ1 bp | coding (1438/2244 nt) | fhuA → | ferrichrome outer membrane transporter/phage receptor |
| RA | 173,198 | C→T | T579T (ACC→ACT) | fhuB → | iron(III) hydroxamate ABC transporter membrane subunit |
| RA | 179,608 | Δ1 bp | coding (372/1518 nt) | dgt → | dGTP triphosphohydrolase |
| RA | 182,578 | G→A | G39D (GGC→GAC) | cdaR → | DNA‑binding transcriptional activator CdaR |
| RA | 191,485 | A→G | E210G (GAA→GGA) | tsf → | protein chain elongation factor EF‑Ts |
| RA | 192,324 | A→G | E157G (GAA→GGA) | pyrH → | UMP kinase |
| RA | 204,263 | C→T | L306L (CTG→TTG) | lpxB → | lipid A disaccharide synthase |
| RA | 207,668 | C→T | A848V (GCC→GTC) | dnaE → | DNA polymerase III subunit alpha |
| RA | 208,192 | T→A | S1023T (TCC→ACC) | dnaE → | DNA polymerase III subunit alpha |
| RA | 215,252 | A→G | E140E (GAA→GAG) | arfB → | peptidyl‑tRNA hydrolase, ribosome rescue factor |
| RA | 217,355 | A→G | F474S (TTC→TCC) | proS ← | proline‑‑tRNA ligase |
| RA | 229,456 | A→G | H97R (CAC→CGC) | dkgB → | methylglyoxal reductase DkgB |
| RA | 233,268 | A→G | Y230H (TAC→CAC) | mltD ← | membrane‑bound lytic murein transglycosylase D |
| RA | 248,373 | (C)5→4 | pseudogene (1698/1713 nt) | lfhA ← | flagellar system protein, promoterless fragment |
| MC JC | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| RA | 266,547 | G→T | R3S (CGT→AGT) | yafY ← | CP4‑6 prophage; inner membrane lipoprotein YafY |
| RA | 267,012 | A→G | intergenic (‑459/+172) | yafY ← / ← yafZ | CP4‑6 prophage; inner membrane lipoprotein YafY/CP4‑6 prophage; conserved protein YafZ |
| RA | 268,409 | C→T | E184E (GAG→GAA) | ykfA ← | CP4‑6 prophage; putative GTP‑binding protein YkfA |
| RA | 278,518 | Δ1 bp | coding (285/1047 nt) | afuC ← | CP4‑6 prophage; ABC transporter ATP‑binding protein AfuC |
| RA | 281,837 | C→A | Q49H (CAG→CAT) | yagA ← | CP4‑6 prophage; integrase core domain‑containing protein YagA |
| RA | 293,374 | A→G | V182A (GTT→GCT) | yagL ← | CP4‑6 prophage; resolvase‑like catalytic domain‑containing protein YagL |
| RA | 298,160 | C→G | A189A (GCG→GCC) | paoD ← | molybdenum cofactor insertion chaperone for PaoABC |
| RA | 304,754 | C→T | R151Q (CGA→CAA) | ecpE ← | putative fimbrial chaperone EcpE |
| RA | 311,801 | G→A | intergenic (‑465/‑311) | ecpR ← / → ykgL | DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL |
| RA | 314,142 | T→A | intergenic (‑337/‑215) | ykgP ← / → eaeH | putative oxidoreductase/putative porin domain‑containing protein EaeH |
| RA | 314,734 | Δ1 bp | pseudogene (378/888 nt) | eaeH → | putative porin domain‑containing protein EaeH |
| RA | 317,653 | A→G | intergenic (‑517/+73) | ykgA ← / ← rclC | putative DNA‑binding transcriptional regulator YkgA/reactive chlorine species resistance protein C |
| RA | 319,137 | C→G | A289P (GCG→CCG) | rclA ← | putative pyridine nucleotide‑disulfide oxidoreductase RclA |
| RA | 334,105 | T→G | H110P (CAC→CCC) | yahB ← | putative LysR‑type DNA‑binding transcriptional regulator YahB |
| RA | 341,434 | C→G | P104A (CCG→GCG) | yahJ → | putative deaminase with metallo‑dependent hydrolase domain |
| RA | 342,381 | A→C | K419N (AAA→AAC) | yahJ → | putative deaminase with metallo‑dependent hydrolase domain |
| RA | 351,307 | A→G | K31K (AAA→AAG) | prpD → | 2‑methylcitrate dehydratase |
| RA | 368,027 | A→G | F132L (TTT→CTT) | mhpR ← | DNA‑binding transcriptional activator MhpR |
| RA | 372,465 | Δ1 bp | coding (351/810 nt) | mhpD → | 2‑hydroxypentadienoate hydratase |
| RA | 380,022 | (G)10→9 | intergenic (‑141/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| RA | 387,413 | T→A | L148Q (CTG→CAG) | tauC → | taurine ABC transporter membrane subunit |
| RA | 389,984 | A→G | intergenic (‑257/‑267) | hemB ← / → yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| RA | 390,136 | A→G | intergenic (‑409/‑115) | hemB ← / → yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| RA | 396,819 | (T)6→5 | coding (181/1221 nt) | sbmA → | peptide antibiotic/peptide nucleic acid transporter |
| RA | 396,964 | A→G | N109S (AAC→AGC) | sbmA → | peptide antibiotic/peptide nucleic acid transporter |
| RA | 399,509 | T→C | intergenic (‑176/‑84) | yaiY ← / → yaiZ | inner membrane protein/DUF2754 domain‑containing protein YaiZ |
| RA | 404,920 | A→G | V242A (GTA→GCA) | proC ← | pyrroline‑5‑carboxylate reductase |
| RA | 405,356 | C→T | A97T (GCT→ACT) | proC ← | pyrroline‑5‑carboxylate reductase |
| RA | 408,476 | Δ1 bp | intergenic (+15/‑133) | ppnP → / → ykiA | nucleoside phosphorylase PpnP/DUF2773 domain‑containing protein YkiA |
| RA | 437,112 | G→A | intergenic (+5/+49) | pgpA → / ← yajO | phosphatidylglycerophosphatase A/1‑deoxyxylulose‑5‑phosphate synthase YajO |
| RA | 450,100 | T→C | Y181C (TAC→TGC) | cyoB ← | cytochrome bo3 ubiquinol oxidase subunit 1 |
| RA | 451,589 | Δ1 bp | coding (22/948 nt) | cyoA ← | cytochrome bo3 ubiquinol oxidase subunit 2 |
| RA | 462,215 | C→A | L101M (CTG→ATG) | ppiD → | periplasmic folding chaperone |
| RA | 471,053 | G→T | V140F (GTT→TTT) | mdlB → | ABC transporter family protein MdlB |
| RA | 480,275 | A→G | L12L (TTA→CTA) | hha ← | hemolysin expression modulating protein |
| RA | 508,288 | A→G | D24G (GAT→GGT) | ybaQ → | putative DNA‑binding transcriptional regulator YbaQ |
| RA | 519,900 | C→T | L56L (CTC→CTT) | ybbA → | putative ABC transporter ATP‑binding protein YbbA |
| RA | 538,029 | A→G | I133V (ATT→GTT) | ybbW → | putative allantoin transporter |
| RA | 539,434 | G→A | L96L (CTG→CTA) | allB → | allantoinase |
| RA | 552,391 | A→G | F68F (TTT→TTC) | purK ← | 5‑(carboxyamino)imidazole ribonucleotide synthase |
| RA | 553,240 | T→C | E234G (GAG→GGG) | lpxH ← | UDP‑2,3‑diacylglucosamine diphosphatase |
| RA | 560,244 | A→G | N183S (AAT→AGT) | sfmD → | putative fimbrial usher protein SfmD |
| RA | 568,797 | T→C | Y35H (TAT→CAT) | ylcJ → | protein YlcJ |
| RA | 577,009 | A→G | intergenic (‑184/‑389) | nmpC ← / → essD | DLP12 prophage; putative outer membrane porin NmpC/DLP12 prophage; putative phage lysis protein |
| RA | 582,267 | G→A | pseudogene (540/655 nt) | ybcY ← | DLP12 prophage; putative SAM‑dependent methyltransferase YbcY |
| RA | 583,957 | (T)6→5 | coding (277/750 nt) | appY → | DNA‑binding transcriptional activator AppY |
| RA | 585,573 | A→G | S21P (TCT→CCT) | ompT ← | outer membrane protease VII (outer membrane protein 3b) |
| RA | 601,907 | C→T | intergenic (+50/‑52) | cusA → / → pheP | copper/silver export system RND permease/phenylalanine:H(+) symporter PheP |
| RA | 611,479 | A→G | I339T (ATT→ACT) | fepA ← | ferric enterobactin outer membrane transporter |
| RA | 612,345 | A→G | V50V (GTT→GTC) | fepA ← | ferric enterobactin outer membrane transporter |
| RA | 612,670 | A→G | intergenic (‑176/‑67) | fepA ← / → fes | ferric enterobactin outer membrane transporter/enterochelin esterase |
| RA | 629,717 | C→T | intergenic (+4/‑177) | entH → / → cstA | proofreading thioesterase in enterobactin biosynthesis/carbon starvation protein A |
| RA | 633,421 | T→C | P19P (CCA→CCG) | hcxA ← | hydroxycarboxylate dehydrogenase A |
| RA | 635,957 | A→G | Y205H (TAC→CAC) | ybdN ← | putative PAPS reductase/DUF3440 domain‑containing protein YbdN |
| RA | 636,750 | G→A | S290F (TCC→TTC) | ybdO ← | putative LysR family DNA‑binding transcriptional regulator YbdO |
| RA | 642,100 | Δ1 bp | coding (13/1239 nt) | ybdR → | putative Zn(2(+))‑dependent alcohol dehydrogenase YbdR |
| RA | 653,615 | T→C | F461L (TTC→CTC) | dpiB → | sensory histidine kinase DpiB |
| RA | 673,832 | T→A | I318F (ATT→TTT) | leuS ← | leucine‑‑tRNA ligase |
| RA | 689,114 | C→T | intergenic (‑101/+229) | insH‑3 ← / ← lnt | IS5 transposase and trans‑activator/apolipoprotein N‑acyltransferase |
| RA | 692,765 | Δ1 bp | coding (614/1041 nt) | ybeZ ← | PhoH‑like protein |
| RA | 697,144 | (T)8→7 | intergenic (‑11/+369) | metT ← / ← asnB | tRNA‑Met/asparagine synthetase B |
| RA | 698,541 | G→T | R213S (CGT→AGT) | asnB ← | asparagine synthetase B |
| RA | 721,886 | (C)5→4 | coding (2529/2685 nt) | kdpD ← | sensory histidine kinase KdpD |
| RA | 723,868 | (G)5→4 | coding (547/2685 nt) | kdpD ← | sensory histidine kinase KdpD |
| RA | 728,969 | Δ1 bp | intergenic (‑148/‑165) | kdpF ← / → ybfA | K(+) transporting P‑type ATPase subunit KdpF/DUF2517 domain‑containing protein YbfA |
| RA | 736,714 | A→G | intergenic (+15/‑186) | ybfQ → / → ybfL | inactive transposase YbfQ/putative transposase YbfL |
| RA | 742,314 | (C)5→4 | coding (243/1482 nt) | dtpD ← | dipeptide:H(+) symporter DtpD |
| RA | 751,308 | C→T | V288I (GTC→ATC) | ybgQ ← | putative fimbrial usher protein YbgQ |
| RA | 753,415 | A→G | Y352H (TAC→CAC) | gltA ← | citrate synthase |
| RA | 797,736 | T→C | E232E (GAA→GAG) | ybhA ← | pyridoxal phosphate/fructose‑1,6‑bisphosphate phosphatase |
| RA | 808,026 | T→C | Q411R (CAG→CGG) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| RA | 814,361 | A→G | K279R (AAA→AGA) | uvrB → | excision nuclease subunit B |
| RA | 819,067 | (T)7→8 | coding (20/246 nt) | moaD → | molybdopterin synthase sulfur carrier subunit |
| RA | 844,966 | (T)7→8 | coding (515/2226 nt) | ybiO ← | moderate conductance mechanosensitive channel |
| RA | 868,422 | (C)8→7 | coding (903/1872 nt) | gsiA → | glutathione ABC transporter ATP binding subunit GsiA |
| RA | 872,430 | Δ1 bp | coding (541/912 nt) | gsiD → | glutathione ABC transporter membrane subunit GsiD |
| RA | 881,661 | T→G | L312R (CTC→CGC) | dacC → | D‑alanyl‑D‑alanine carboxypeptidase DacC |
| RA | 885,221 | T→C | K4E (AAA→GAA) | ybjH ← | uncharacterized protein YbjH |
| RA | 894,965 | C→A | intergenic (+69/‑26) | potF → / → potG | putrescine ABC transporter periplasmic binding protein/putrescine ABC transporter ATP binding subunit |
| RA | 900,736 | A→G | intergenic (‑161/+130) | artJ ← / ← artM | L‑arginine ABC transporter periplasmic binding protein/L‑arginine ABC transporter membrane subunit ArtM |
| RA | 903,830 | G→A | intergenic (‑96/+122) | artP ← / ← ybjP | L‑arginine ABC transporter ATP binding subunit/DUF3828 domain‑containing lipoprotein YbjP |
| RA | 911,171 | Δ1 bp | intergenic (‑122/+11) | poxB ← / ← hcr | pyruvate oxidase/NADH oxidoreductase |
| RA | 913,852 | Δ1 bp | intergenic (‑38/+106) | hcp ← / ← lysO | protein S‑nitrosylase/L‑lysine exporter |
| RA | 914,159 | T→C | E233E (GAA→GAG) | lysO ← | L‑lysine exporter |
| RA | 919,229 | A→G | intergenic (‑109/‑6) | ybjX ← / → macA | DUF535 domain‑containing protein YbjX/ABC‑type tripartite efflux pump membrane fusion protein |
| RA | 922,079 | T→G | L578R (CTG→CGG) | macB → | ABC‑type tripartite efflux pump ATP binding/membrane subunit |
| RA | 932,340 | (A)8→7 | intergenic (‑290/‑255) | trxB ← / → lrp | thioredoxin reductase/DNA‑binding transcriptional dual regulator Lrp |
| RA | 934,494 | C→T | A424V (GCG→GTG) | ftsK → | cell division DNA translocase FtsK |
| RA | 935,242 | A→G | V673V (GTA→GTG) | ftsK → | cell division DNA translocase FtsK |
| RA | 940,853 | C→T | intergenic (+133/‑106) | serS → / → dmsA | serine‑‑tRNA ligase/dimethyl sulfoxide reductase subunit A |
| RA | 941,442 | T→G | S162A (TCT→GCT) | dmsA → | dimethyl sulfoxide reductase subunit A |
| RA | 949,466 | T→C | S35G (AGC→GGC) | ycaN ← | putative LysR‑type transcriptional regulator YcaN |
| RA | 970,141 | C→T | I251I (ATC→ATT) | ycaQ → | winged helix DNA‑binding domain‑containing protein YcaQ |
| RA | 978,267 | G→A | E648K (GAA→AAA) | mukB → | chromosome partitioning protein MukB |
| RA | 981,907 | C→A | S287S (TCC→TCA) | ldtD → | L,D‑transpeptidase LdtD |
| RA | 982,788 | T→C | V581A (GTT→GCT) | ldtD → | L,D‑transpeptidase LdtD |
| RA | 989,174 | G→A | H395Y (CAT→TAT) | pncB ← | nicotinate phosphoribosyltransferase |
| RA | 990,420 | G→A | intergenic (‑64/‑202) | pncB ← / → pepN | nicotinate phosphoribosyltransferase/aminopeptidase N |
| RA | 994,959 | A→G | L344L (TTG→CTG) | ssuD ← | FMNH2‑dependent alkanesulfonate monooxygenase |
| RA | 995,400 | A→G | W197R (TGG→CGG) | ssuD ← | FMNH2‑dependent alkanesulfonate monooxygenase |
| RA | 997,898 | A→G | T11A (ACT→GCT) | elfA → | putative laminin‑binding fimbrial subunit |
| RA | 1,019,171 | T→A | I295F (ATC→TTC) | ompA ← | outer membrane porin A |
| RA | 1,046,805 | T→G | T381P (ACC→CCC) | gfcD ← | putative lipoprotein GfcD |
| RA | 1,064,853 | A→T | D273V (GAT→GTT) | yccE → | uncharacterized protein YccE |
| RA | 1,065,263 | C→T | L410F (CTC→TTC) | yccE → | uncharacterized protein YccE |
| RA | 1,065,984 | A→G | I134V (ATT→GTT) | agp → | glucose‑1‑phosphatase |
| RA | 1,068,977 | C→G | G288A (GGC→GCC) | rutG ← | pyrimidine:H(+) symporter |
| RA | 1,073,996 | Δ1 bp | coding (16/1149 nt) | rutA ← | pyrimidine oxygenase |
| RA | 1,087,850 | (T)5→4 | coding (2008/2019 nt) | pgaB ← | poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase and beta‑1,6 glycoside hydrolase |
| RA | 1,091,005 | A→G | Y429H (TAT→CAT) | pgaA ← | partially deacetylated poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine outer membrane porin |
| RA | 1,096,234 | C→G | P131R (CCG→CGG) | ycdU → | uncharacterized protein YcdU |
| RA | 1,100,298 | G→A | M1M (ATG→ATA) † | ycdZ → | putative inner membrane protein |
| RA | 1,104,203 | A→G | T85A (ACA→GCA) | csgB → | curlin, minor subunit |
| RA | 1,108,352 | (A)5→4 | coding (590/1158 nt) | opgC ← | protein required for succinyl modification of osmoregulated periplasmic glucans |
| RA | 1,108,581 | G→A | P121S (CCT→TCT) | opgC ← | protein required for succinyl modification of osmoregulated periplasmic glucans |
| RA | 1,114,355 | A→G | V379A (GTA→GCA) | mdtG ← | efflux pump MdtG |
| RA | 1,114,813 | G→A | V226V (GTC→GTT) | mdtG ← | efflux pump MdtG |
| RA | 1,115,538 | G→A | intergenic (‑48/+124) | mdtG ← / ← lpxL | efflux pump MdtG/lauroyl acyltransferase |
| RA | 1,121,231 | (A)8→9 | intergenic (‑276/+11) | bssS ← / ← dinI | regulator of biofilm formation/DNA damage‑inducible protein I |
| RA | 1,128,283 | G→T | A149S (GCG→TCG) | murJ → | putative lipid II flippase MurJ |
| RA | 1,129,774 | T→G | K19N (AAA→AAC) | flgN ← | flagellar biosynthesis protein FlgN |
| RA | 1,133,116 | (A)6→7 | coding (543/1209 nt) | flgE → | flagellar hook protein FlgE |
| RA | 1,135,698 | Δ1 bp | coding (135/699 nt) | flgH → | flagellar L‑ring protein |
| RA | 1,143,716 | A→G | F218L (TTC→CTC) | rne ← | ribonuclease E |
| RA | 1,146,195 | T→C | E134G (GAG→GGG) | yceF ← | m(7)GTP pyrophosphatase |
| RA | 1,146,603 | (T)7→6 | noncoding (15/169 nt) | sraB → | small RNA SraB |
| RA | 1,149,850 | C→T | G41G (GGC→GGT) | fabD → | [acyl‑carrier‑protein] S‑malonyltransferase |
| RA | 1,150,461 | A→G | D245G (GAC→GGC) | fabD → | [acyl‑carrier‑protein] S‑malonyltransferase |
| RA | 1,150,676 | T→C | F3L (TTT→CTT) | fabG → | 3‑oxoacyl‑[acyl‑carrier‑protein] reductase FabG |
| RA | 1,157,840 | (A)7→8 | intergenic (+266/‑29) | ycfH → / → ptsG | putative metal‑dependent hydrolase YcfH/glucose‑specific PTS enzyme IIBC component |
| RA | 1,181,196 | A→G | I24I (ATT→ATC) | ycfZ ← | putative inner membrane protein |
| RA | 1,181,866 | (T)5→4 | coding (964/1047 nt) | potD ← | spermidine preferential ABC transporter periplasmic binding protein |
| RA | 1,185,245 | (T)6→5 | coding (350/1137 nt) | potA ← | spermidine preferential ABC transporter ATP binding subunit |
| RA | 1,189,597 | A→G | Y60Y (TAT→TAC) | phoQ ← | sensory histidine kinase PhoQ |
| RA | 1,196,790 | A→T | intergenic (+417/+77) | icd → / ← ymfD | isocitrate dehydrogenase/e14 prophage; putative SAM‑dependent methyltransferase |
| RA | 1,197,711 | Δ1 bp | coding (527/705 nt) | ymfE ← | e14 prophage; uncharacterized protein YmfE |
| RA | 1,198,874 | A→G | E60E (GAA→GAG) | lit → | e14 prophage; cell death peptidase Lit |
| RA | 1,214,175 | A→G | intergenic (‑116/+89) | bluR ← / ← bluF | DNA‑binding transcriptional repressor BluR/blue light‑responsive regulator of BluR |
| RA | 1,217,089 | C→T | intergenic (+93/‑239) | ymgC → / → pdeG | protein YmgC/putative c‑di‑GMP phosphodiesterase PdeG |
| RA | 1,219,687 | T→C | pseudogene (87/2648 nt) | ycgH → | putative transporter component, N‑terminal fragment |
| RA | 1,220,871 | G→A | pseudogene (1271/2648 nt) | ycgH → | putative transporter component, N‑terminal fragment |
| RA | 1,224,226 | (A)5→4 | intergenic (+319/+53) | ycgI → / ← minE | protein YcgI/Z‑ring positioning protein MinE |
| RA | 1,229,560 | (T)7→8 | coding (835/912 nt) | hlyE ← | hemolysin E |
| RA | 1,230,433 | C→T | intergenic (‑39/‑334) | hlyE ← / → umuD | hemolysin E/DNA polymerase V protein UmuD |
| RA | 1,245,163 | A→G | I2V (ATT→GTT) | ycgY → | uncharacterized protein YcgY |
| RA | 1,253,815 | C→T | G713D (GGC→GAC) | ycgV ← | putative autotransporter adhesin YcgV |
| RA | 1,259,230 | T→C | N525S (AAC→AGC) | dauA ← | aerobic C4‑dicarboxylate transporter DauA |
| RA | 1,276,549 | T→A | D357V (GAT→GTT) | narX ← | sensory histidine kinase NarX |
| RA | 1,277,223 | G→C | A132A (GCC→GCG) | narX ← | sensory histidine kinase NarX |
| RA | 1,284,681 | T→C | S360P (TCT→CCT) | narH → | nitrate reductase A subunit beta |
| RA | 1,287,255 | (G)5→4 | noncoding (74/85 nt) | tyrV ← | tRNA‑Tyr |
| RA | 1,296,554 | C→T | S523N (AGC→AAC) | adhE ← | aldehyde‑alcohol dehydrogenase |
| RA | 1,299,534 | T→C | F2L (TTT→CTT) | insH21 → | IS5 transposase and trans‑activator |
| RA | 1,302,297 | (A)6→7 | coding (1116/1632 nt) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,308,004 | C→A | V214V (GTG→GTT) | clsA ← | cardiolipin synthase A |
| RA | 1,308,572 | A→G | L25S (TTA→TCA) | clsA ← | cardiolipin synthase A |
| RA | 1,313,464 | A→G | V67A (GTT→GCT) | yciC ← | putative inner membrane protein |
| RA | 1,314,871 | (T)6→5 | coding (354/507 nt) | yciE ← | DUF892 domain‑containing protein YciE |
| RA | 1,320,045 | G→T | A447E (GCA→GAA) | trpD ← | anthranilate synthase subunit TrpD |
| RA | 1,323,360 | C→T | T47T (ACC→ACT) | yciV → | RNA/ssDNA 5'‑>3' exonuclease |
| RA | 1,323,906 | C→G | C229W (TGC→TGG) | yciV → | RNA/ssDNA 5'‑>3' exonuclease |
| RA | 1,328,943 | T→C | N57S (AAC→AGC) | yciK ← | putative oxidoreductase |
| RA | 1,336,311 | A→G | K161E (AAA→GAA) | acnA → | aconitate hydratase 1 |
| RA | 1,340,717 | G→A | A54T (GCG→ACG) | lapB → | lipopolysaccharide assembly protein B |
| RA | 1,341,740 | (A)8→9 | intergenic (+13/‑181) | lapB → / → pyrF | lipopolysaccharide assembly protein B/orotidine‑5'‑phosphate decarboxylase |
| RA | 1,345,388 | A→G | L452S (TTG→TCG) | pdeR ← | cyclic di‑GMP phosphodiesterase PdeR |
| RA | 1,346,840 | (T)8→7 | coding (45/105 nt) | ymiB → | putative protein YmiB |
| RA | 1,355,090 | C→T | A127A (GCG→GCA) | sapB ← | putrescine ABC exporter membrane subunit SapB |
| RA | 1,357,678 | Δ1 bp | intergenic (‑10/+124) | ymjA ← / ← puuP | DUF2543 domain‑containing protein YmjA/putrescine:H(+) symporter PuuP |
| RA | 1,371,451 | G→T | L412F (TTG→TTT) | ycjM → | glucosylglycerate phosphorylase |
| RA | 1,374,259 | A→G | E57G (GAG→GGG) | ycjP → | putative ABC transporter membrane subunit YcjP |
| RA | 1,374,401 | Δ1 bp | coding (312/843 nt) | ycjP → | putative ABC transporter membrane subunit YcjP |
| RA | 1,375,016 | A→G | E18E (GAA→GAG) | ycjQ → | putative zinc‑binding dehydrogenase YcjQ |
| RA | 1,384,010 | C→T | intergenic (‑49/‑107) | ycjW ← / → ycjX | putative LacI‑type DNA‑binding transcriptional regulator YcjW/DUF463 domain‑containing protein YcjX |
| RA | 1,384,529 | G→A | W138* (TGG→TAG) | ycjX → | DUF463 domain‑containing protein YcjX |
| RA | 1,399,433 | A→G | F32L (TTC→CTC) | fnr ← | DNA‑binding transcriptional dual regulator FNR |
| RA | 1,402,480 | A→G | I259T (ATC→ACC) | abgB ← | p‑aminobenzoyl‑glutamate hydrolase subunit B |
| RA | 1,405,809 | A→G | intergenic (‑58/‑170) | mcaS ← / → smrA | small regulatory RNA McaS/DNA endonuclease SmrA |
| RA | 1,411,941 | Δ1 bp | coding (8/936 nt) | ttcA ← | tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,413,532 | T→A | *70L (TAA→TTA) | rcbA ← | Rac prophage; double‑strand break reduction protein |
| RA | 1,416,023 | T→C | D455G (GAC→GGC) | recE ← | Rac prophage; exonuclease VIII, ds DNA exonuclease, 5' ‑‑> 3' specific |
| RA | 1,425,909 | A→C | I97L (ATC→CTC) | ydaY → | Rac prophage; putative uncharacterized protein YdaY |
| RA | 1,428,030 | C→G | A233P (GCC→CCC) | insH‑5 ← | Rac prophage; IS5 transposase and trans‑activator |
| RA | 1,435,732 | (A)5→4 | intergenic (‑113/+28) | uspF ← / ← ompN | nucleotide binding filament protein/outer membrane porin N |
| RA | 1,446,434 | C→T | V284I (GTA→ATA) | feaR ← | DNA‑binding transcriptional activator FeaR |
| RA | 1,452,438 | G→T | T402K (ACG→AAG) | paaZ ← | oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase |
| RA | 1,471,263 | G→A | pseudogene (745/3495 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| RA | 1,476,628 | (A)6→5 | coding (1485/2307 nt) | ydbD → | DUF2773 domain‑containing protein YdbD |
| RA | 1,476,830 | T→C | Y563H (TAT→CAT) | ydbD → | DUF2773 domain‑containing protein YdbD |
| RA | 1,477,049 | G→A | E636K (GAA→AAA) | ydbD → | DUF2773 domain‑containing protein YdbD |
| RA | 1,481,929 | (T)5→4 | coding (1021/1293 nt) | ynbD → | putative phosphatase |
| RA | 1,482,623 | A→G | L80L (TTG→CTG) | azoR ← | FMN dependent NADH:quinone oxidoreductase |
| RA | 1,483,753 | T→C | T231T (ACT→ACC) | hrpA → | ATP‑dependent RNA helicase HrpA |
| RA | 1,490,954 | (T)5→4 | coding (53/531 nt) | cybB → | cytochrome b561 |
| RA | 1,493,606 | T→C | I379I (ATT→ATC) | trg → | methyl‑accepting chemotaxis protein Trg |
| RA | 1,495,571 | G→A | S95N (AGC→AAC) | ydcJ → | DUF1338 domain‑containing protein YdcJ |
| RA | 1,497,463 | C→T | T203I (ACT→ATT) | opgD → | glucan biosynthesis protein D |
| RA | 1,497,760 | A→C | D302A (GAT→GCT) | opgD → | glucan biosynthesis protein D |
| RA | 1,501,508 | A→G | G312G (GGA→GGG) | tehA → | tellurite resistance protein |
| RA | 1,508,541 | T→A | N587K (AAT→AAA) | rlhA → | 23S rRNA 5‑hydroxycytidine C2501 synthase |
| RA | 1,512,246 | T→G | V198G (GTT→GGT) | ydcS → | putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase |
| RA | 1,519,851 | (A)6→5 | coding (825/1038 nt) | curA → | NADPH‑dependent curcumin/dihydrocurcumin reductase |
| RA | 1,520,982 | A→G | I695T (ATT→ACT) | yncD ← | putative TonB‑dependent outer membrane receptor |
| RA | 1,531,277 | G→A | pseudogene (692/1054 nt) | yncI → | putative transposase YncI |
| RA | 1,533,437 | A→G | Y139H (TAC→CAC) | yddH ← | flavin reductase‑like protein YddH |
| RA | 1,551,332 | A→C | D291A (GAT→GCT) | fdnH → | formate dehydrogenase N subunit beta |
| RA | 1,561,398 | A→G | Y362H (TAC→CAC) | ddpA ← | putative D,D‑dipeptide ABC transporter periplasmic binding protein |
| RA | 1,572,102 | T→C | intergenic (‑57/+305) | gadB ← / ← pqqL | glutamate decarboxylase B/putative zinc peptidase |
| RA | 1,575,336 | T→G | S762R (AGC→CGC) | yddB ← | putative TonB‑dependent receptor |
| RA | 1,578,871 | A→G | F158L (TTC→CTC) | yddA ← | ABC transporter family protein YddA |
| RA | 1,585,441 | G→C | A349G (GCC→GGC) | ydeP ← | putative oxidoreductase YdeP |
| RA | 1,589,881 | G→A | L41F (CTT→TTT) | ydeT ← | fimbrial usher domain‑containing protein YdeT |
| RA | 1,601,831 | (A)7→6 | coding (342/1536 nt) | lsrA → | Autoinducer‑2 ABC transporter ATP binding subunit |
| RA | 1,603,093 | T→C | G25G (GGT→GGC) | lsrC → | Autoinducer‑2 ABC transporter membrane subunit LsrC |
| RA | 1,607,828 | C→T | G161G (GGC→GGT) | tam → | trans‑aconitate 2‑methyltransferase |
| RA | 1,610,589 | A→G | V31A (GTT→GCT) | uxaB ← | tagaturonate reductase |
| RA | 1,622,797 | Δ1 bp | intergenic (+56/+20) | mgtS → / ← mgrR | small protein MgtS/small regulatory RNA MgrR |
| RA | 1,637,304 | C→T | I86I (ATC→ATT) | ydfO → | Qin prophage; protein YdfO |
| RA | 1,651,979 | Δ1 bp | pseudogene (468/1197 nt) | intQ → | Qin prophage; putative defective integrase |
| RA | 1,658,706 | G→C | G213A (GGC→GCC) | ynfE → | putative selenate reductase YnfE |
| RA | 1,667,359 | A→G | R402R (CGT→CGC) | mlc ← | DNA‑binding transcriptional repressor Mlc |
| RA | 1,674,767 | Δ1 bp | coding (855/1035 nt) | tqsA → | autoinducer 2 exporter |
| RA | 1,676,370 | +C | intergenic (‑10/+1) | pntB ← / ← pntA | pyridine nucleotide transhydrogenase subunit beta/pyridine nucleotide transhydrogenase subunit alpha |
| RA | 1,677,184 | T→C | E240E (GAA→GAG) | pntA ← | pyridine nucleotide transhydrogenase subunit alpha |
| RA | 1,680,663 | C→T | P369P (CCC→CCT) | ydgI → | putative arginine:ornithine antiporter |
| RA | 1,682,286 | G→A | R43Q (CGA→CAA) | rstA → | DNA‑binding transcriptional regulator RstA |
| RA | 1,686,411 | C→T | E60K (GAA→AAA) | fumC ← | fumarase C |
| RA | 1,688,632 | G→A | L19L (TTG→TTA) | manA → | mannose‑6‑phosphate isomerase |
| RA | 1,706,464 | A→T | K39N (AAA→AAT) | rsxB → | SoxR [2Fe‑2S] reducing system protein RsxB |
| RA | 1,709,108 | (A)6→5 | coding (2190/2223 nt) | rsxC → | SoxR [2Fe‑2S] reducing system protein RsxC |
| RA | 1,712,286 | (A)5→4 | intergenic (+128/‑483) | nth → / → dtpA | endonuclease III/dipeptide/tripeptide:H(+) symporter DtpA |
| RA | 1,719,889 | T→C | V5A (GTA→GCA) | slyB → | outer membrane lipoprotein SlyB |
| RA | 1,724,672 | G→C | intergenic (‑17/+64) | sodC ← / ← ydhF | superoxide dismutase (Cu‑Zn)/putative oxidoreductase |
| RA | 1,734,482 | (T)5→6 | coding (48/816 nt) | mepH → | peptidoglycan DD‑endopeptidase MepH |
| RA | 1,737,888 | T→C | T15T (ACT→ACC) | purR → | DNA‑binding transcriptional repressor PurR |
| RA | 1,738,219 | T→C | Y126H (TAC→CAC) | purR → | DNA‑binding transcriptional repressor PurR |
| RA | 1,739,480 | T→C | T107A (ACA→GCA) | ydhB ← | putative LysR family DNA‑binding transcriptional regulator YdhB |
| RA | 1,740,480 | T→C | S190S (AGT→AGC) | ydhC → | putative transporter YdhC |
| RA | 1,747,237 | A→G | D36G (GAC→GGC) | ydhS → | FAD/NAD(P) binding domain‑containing protein YdhS |
| RA | 1,750,974 | T→A | T14S (ACA→TCA) | ydhX ← | putative 4Fe‑4S ferredoxin‑type protein |
| RA | 1,756,051 | T→C | S118S (TCT→TCC) | pykF → | pyruvate kinase I |
| RA | 1,756,965 | T→A | I423N (ATC→AAC) | pykF → | pyruvate kinase I |
| RA | 1,757,817 | G→A | S303S (AGC→AGT) | ldtE ← | L,D‑transpeptidase LdtE |
| RA | 1,768,939 | (T)7→6 | intergenic (‑254/‑135) | ydiJ ← / → ydiK | putative FAD‑linked oxidoreductase/putative transporter YdiK |
| RA | 1,770,149 | T→G | L359R (CTC→CGC) | ydiK → | putative transporter YdiK |
| RA | 1,774,321 | T→C | V178A (GTC→GCC) | ydiB → | shikimate dehydrogenase/quinate dehydrogenase |
| RA | 1,775,523 | G→A | intergenic (+79/‑64) | aroD → / → ydiF | 3‑dehydroquinate dehydratase/putative acetate‑CoA transferase |
| RA | 1,776,136 | G→A | A184T (GCC→ACC) | ydiF → | putative acetate‑CoA transferase |
| RA | 1,779,491 | (T)8→9 | intergenic (‑190/‑126) | ydiP ← / → ydiQ | putative DNA‑binding transcriptional regulator YdiP/putative electron transfer flavoprotein subunit YdiQ |
| RA | 1,781,876 | G→A | G161D (GGC→GAC) | ydiS → | putative oxidoreductase with FAD/NAD(P)‑binding domain |
| RA | 1,785,652 | C→T | M487I (ATG→ATA) | ppsA ← | phosphoenolpyruvate synthetase |
| RA | 1,787,109 | A→G | S2P (TCC→CCC) | ppsA ← | phosphoenolpyruvate synthetase |
| RA | 1,790,264 | T→C | E327E (GAA→GAG) | ydiU ← | UPF0061 family protein YdiU |
| RA | 1,790,524 | Δ1 bp | coding (721/1437 nt) | ydiU ← | UPF0061 family protein YdiU |
| RA | 1,791,609 | Δ1 bp | coding (412/714 nt) | ydiV ← | anti‑FlhDC factor |
| RA | 1,796,866 | T→C | Y360C (TAT→TGT) | pheT ← | phenylalanine‑‑tRNA ligase subunit beta |
| RA | 1,799,179 | Δ1 bp | intergenic (‑237/+47) | pheS ← / ← pheM | phenylalanine‑‑tRNA ligase subunit alpha/pheST‑ihfA operon leader peptide |
| RA | 1,807,314 | (C)5→4 | intergenic (+15/‑86) | pfkB → / → ydiZ | 6‑phosphofructokinase II/protein YdiZ |
| RA | 1,808,200 | G→A | Q135Q (CAG→CAA) | yniA → | putative kinase YniA |
| RA | 1,809,808 | (A)5→6 | coding (429/669 nt) | hxpB → | hexitol phosphatase B |
| RA | 1,812,996 | C→T | C46Y (TGC→TAC) | ydjO ← | protein YdjO |
| RA | 1,824,185 | T→C | V224A (GTG→GCG) | cho → | endonuclease of nucleotide excision repair |
| RA | 1,830,943 | T→C | Y347C (TAC→TGC) | astC ← | succinylornithine transaminase |
| RA | 1,832,109 | G→A | intergenic (‑127/‑319) | astC ← / → xthA | succinylornithine transaminase/exodeoxyribonuclease III |
| RA | 1,832,618 | G→C | G64A (GGC→GCC) | xthA → | exodeoxyribonuclease III |
| RA | 1,838,080 | (T)7→8 | coding (869/1536 nt) | ynjC → | putative ABC transporter membrane subunit YnjC |
| RA | 1,844,593 | (T)7→8 | coding (279/1041 nt) | ynjI ← | DUF1266 domain‑containing protein YnjI |
| RA | 1,861,251 | C→T | D28N (GAT→AAT) | ydjL ← | putative zinc‑binding dehydrogenase YdjL |
| RA | 1,873,121 | G→A | E361K (GAA→AAA) | dgcJ → | putative diguanylate cyclase DgcJ |
| RA | 1,878,986 | A→G | intergenic (+38/+21) | yoaJ → / ← yeaQ | uncharacterized protein YoaJ/PF04226 family protein YeaQ |
| RA | 1,895,120 | G→A | A106T (GCA→ACA) | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,915,070 | T→C | K155K (AAA→AAG) | proQ ← | RNA chaperone ProQ |
| RA | 1,915,177 | (T)6→5 | coding (358/699 nt) | proQ ← | RNA chaperone ProQ |
| RA | 1,916,632 | T→C | V125V (GTT→GTC) | yebS → | intermembrane transport protein YebS |
| RA | 1,925,648 | G→A | C70Y (TGT→TAT) | yobB → | putative carbon‑nitrogen hydrolase family protein YobB |
| RA | 1,928,777 | A→G | D21D (GAT→GAC) | ptrB ← | oligopeptidase B |
| RA | 1,931,057 | T→C | I59I (ATT→ATC) | purT → | phosphoribosylglycinamide formyltransferase 2 |
| RA | 1,936,532 | (A)8→7 | intergenic (‑218/‑120) | zwf ← / → yebK | NADP(+)‑dependent glucose‑6‑phosphate dehydrogenase/DNA‑binding transcriptional repressor YebK |
| RA | 1,945,629 | A→G | I116I (ATT→ATC) | ruvA ← | Holliday junction branch migration complex subunit RuvA |
| RA | 1,946,197 | (A)6→5 | intergenic (‑17/‑54) | yobI ← / → yebB | uncharacterized protein YobI/putative papain‑like amidase YebB |
| RA | 1,946,207 | (T)6→5 | intergenic (‑27/‑44) | yobI ← / → yebB | uncharacterized protein YobI/putative papain‑like amidase YebB |
| RA | 1,947,941 | C→T | A71T (GCA→ACA) | yebC ← | putative transcriptional regulator YebC |
| RA | 1,958,445 | A→C | noncoding (76/80 nt) | micL ← | small regulatory RNA MicL‑S |
| RA | 1,962,324 | T→C | V118A (GTT→GCT) | yecT → | protein YecT |
| RA | 1,968,362 | T→C | K47R (AAA→AGA) | cheB ← | protein‑glutamate methylesterase/protein glutamine deamidase |
| RA | 1,978,270 | Δ1 bp | intergenic (‑73/+248) | flhD ← / ← insB‑5 | DNA‑binding transcriptional dual regulator FlhD/IS1 protein InsB |
| RA | 1,993,117 | G→A | I530I (ATC→ATT) | uvrC ← | excision nuclease subunit C |
| RA | 1,995,681 | T→C | Y9Y (TAT→TAC) | yecU → | protein YecU |
| RA | 1,995,748 | C→G | L32V (CTT→GTT) | yecU → | protein YecU |
| RA | 2,004,304 | G→A | A145T (GCG→ACG) | fliD → | flagellar filament capping protein |
| RA | 2,007,153 | C→T | T333I (ACC→ATC) | amyA → | alpha‑amylase |
| RA | 2,015,409 | A→G | E177G (GAA→GGA) | fliG → | flagellar motor switch protein FliG |
| RA | 2,021,488 | G→T | R134L (CGC→CTC) | fliN → | flagellar motor switch protein FliN |
| RA | 2,023,827 | T→C | intergenic (+149/‑141) | fliR → / → rcsA | flagellar biosynthesis protein FliR/DNA‑binding transcriptional activator RcsA |
| RA | 2,029,902 | C→T | R122C (CGC→TGC) | yedA → | putative transporter YedA |
| RA | 2,043,040 | (A)5→4 | intergenic (+142/+428) | yodB → / ← serU | putative cytochrome/tRNA‑Ser |
| RA | 2,044,771 | Δ1 bp | intergenic (+147/‑167) | asnT → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| RA | 2,052,044 | C→T | intergenic (+30/+232) | yeeJ → / ← yeeL | inverse autotransporter adhesin/putative glycosyltransferase, N‑terminal fragment |
| RA | 2,056,756 | T→C | intergenic (+241/‑102) | amn → / → yeeN | AMP nucleosidase/putative transcriptional regulator YeeN |
| RA | 2,062,407 | G→A | S306L (TCA→TTA) | ldtA ← | L,D‑transpeptidase ErfK |
| RA | 2,063,976 | (T)6→7 | coding (492/1080 nt) | cobT ← | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase |
| RA | 2,072,377 | (A)5→4 | coding (839/3120 nt) | flu → | CP4‑44 prophage; self recognizing antigen 43 (Ag43) autotransporter |
| RA | 2,081,891 | C→A | G219G (GGG→GGT) | dacD ← | D‑alanyl‑D‑alanine carboxypeptidase DacD |
| RA | 2,088,440 | A→T | L230* (TTA→TAA) | yeeZ ← | putative epimerase YeeZ |
| RA | 2,098,903 | A→G | R237R (CGT→CGC) | ugd ← | UDP‑glucose 6‑dehydrogenase |
| RA | 2,103,378 | T→C | pseudogene (12/446 nt) | wbbL ← | interrupted rhamnosyltransferase WbbL |
| RA | 2,107,809 | C→T | R174K (AGA→AAA) | glf ← | UDP‑galactopyranose mutase |
| RA | 2,108,138 | A→G | Y64Y (TAT→TAC) | glf ← | UDP‑galactopyranose mutase |
| RA | 2,113,482 | T→C | K282K (AAA→AAG) | galF ← | UTP:glucose‑1‑phosphate uridylyltransferase, low activity |
| RA | 2,113,535 | (T)7→8 | coding (793/894 nt) | galF ← | UTP:glucose‑1‑phosphate uridylyltransferase, low activity |
| RA | 2,113,701 | G→A | I209I (ATC→ATT) | galF ← | UTP:glucose‑1‑phosphate uridylyltransferase, low activity |
| RA | 2,125,056 | (T)7→8 | coding (691/1224 nt) | wcaI ← | putative colanic biosynthesis glycosyl transferase |
| RA | 2,138,744 | G→A | Q281Q (CAG→CAA) | yegH → | inner membrane protein YegH |
| RA | 2,141,015 | T→A | T200S (ACG→TCG) | asmA ← | putative assembly protein AsmA |
| RA | 2,150,632 | Δ1 bp | coding (354/1947 nt) | yegI ← | protein kinase YegI |
| RA | 2,176,866 | A→G | N113N (AAT→AAC) | gatY ← | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY |
| RA | 2,177,022 | A→C | N61K (AAT→AAG) | gatY ← | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY |
| RA | 2,183,325 | Δ1 bp | coding (327/819 nt) | yegX ← | putative hydrolase |
| RA | 2,191,691 | C→T | A178T (GCG→ACG) | yehD ← | putative fimbrial protein YehD |
| RA | 2,197,865 | C→A | intergenic (+567/‑2414) | yehF → / → yehI | putative protein YehF/DUF4132 domain‑containing protein YehI |
| RA | 2,209,997 | T→C | L300L (TTA→CTA) | yehQ → | SWIM zinc finger domains‑containing protein YehQ |
| RA | 2,221,701 | T→C | M97V (ATG→GTG) | bglX ← | beta‑D‑glucoside glucohydrolase, periplasmic |
| RA | 2,229,186 | C→G | intergenic (+121/+252) | yohP → / ← dusC | putative membrane protein YohP/tRNA‑dihydrouridine(16) synthase |
| RA | 2,233,561 | A→G | E228E (GAA→GAG) | sanA → | DUF218 domain‑containing protein SanA |
| RA | 2,234,698 | T→C | G222G (GGT→GGC) | preT → | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreT |
| RA | 2,249,651 | A→G | intergenic (‑33/‑66) | yeiE ← / → yeiH | putative LysR‑type transcriptional regulator YeiE/conserved inner membrane protein YeiH |
| RA | 2,254,557 | Δ1 bp | coding (630/942 nt) | rihB ← | pyrimidine‑specific ribonucleoside hydrolase RihB |
| RA | 2,259,134 | T→A | N55Y (AAC→TAC) | psuK ← | putative pseudouridine kinase |
| RA | 2,260,779 | T→C | K211R (AAA→AGA) | fruA ← | fructose‑specific PTS multiphosphoryl transfer protein FruA |
| RA | 2,263,837 | T→C | intergenic (‑342/‑26) | fruB ← / → setB | fructose‑specific PTS multiphosphoryl transfer protein FruB/sugar exporter SetB |
| RA | 2,269,545 | (A)6→5 | coding (692/714 nt) | lpxT → | Kdo2‑lipid A phosphotransferase |
| RA | 2,273,494 | (A)6→5 | coding (1131/1815 nt) | yejA → | putative oligopeptide ABC transporter periplasmic binding protein |
| RA | 2,284,750 | C→T | N125N (AAC→AAT) | yejM → | putative cardiolipin transport protein |
| RA | 2,312,788 | (T)6→7 | intergenic (‑39/‑296) | ompC ← / → micF | outer membrane porin C/small regulatory RNA MicF |
| RA | 2,328,408 | (T)7→8 | coding (1390/1650 nt) | yfaQ ← | tandem DUF2300 domain‑containing protein YfaQ |
| RA | 2,328,774 | C→T | A342T (GCA→ACA) | yfaQ ← | tandem DUF2300 domain‑containing protein YfaQ |
| RA | 2,329,692 | G→A | L36L (CTG→TTG) | yfaQ ← | tandem DUF2300 domain‑containing protein YfaQ |
| RA | 2,342,381 | C→T | V597I (GTT→ATT) | yfaL ← | putative autotransporter adhesin YfaL |
| RA | 2,354,944 | C→T | A227V (GCC→GTC) | glpB → | anaerobic glycerol‑3‑phosphate dehydrogenase subunit B |
| RA | 2,355,061 | T→C | F266S (TTT→TCT) | glpB → | anaerobic glycerol‑3‑phosphate dehydrogenase subunit B |
| RA | 2,359,162 | C→T | A331T (GCG→ACG) | yfaV ← | putative transporter YfaV |
| RA | 2,359,509 | A→G | L215P (CTT→CCT) | yfaV ← | putative transporter YfaV |
| RA | 2,364,390 | T→C | intergenic (‑115/‑164) | yfaZ ← / → nudI | putative porin YfaZ/pyrimidine deoxynucleotide diphosphatase NudI |
| RA | 2,382,824 | (A)8→7 | coding (112/1212 nt) | elaD → | protease ElaD |
| RA | 2,384,163 | T→C | V520V (GTA→GTG) | yfbK ← | IPR002035/DUF3520 domain‑containing protein YfbK |
| RA | 2,386,436 | G→A | A193T (GCA→ACA) | yfbL → | putative peptidase YfbL |
| RA | 2,398,385 | T→A | D594V (GAT→GTT) | nuoG ← | NADH:quinone oxidoreductase subunit G |
| RA | 2,430,633 | T→C | Y44C (TAC→TGC) | cvpA ← | colicin V production protein |
| RA | 2,439,254 | T→C | E289E (GAA→GAG) | yfcJ ← | putative transporter YfcJ |
| RA | 2,449,191 | G→A | intergenic (+34/+37) | smrB → / ← yfcO | putative endonuclease SmrB/DUF2544 domain‑containing protein YfcO |
| RA | 2,450,781 | T→C | T99A (ACT→GCT) | yfcQ ← | putative fimbrial protein YfcQ |
| RA | 2,451,016 | A→G | D20D (GAT→GAC) | yfcQ ← | putative fimbrial protein YfcQ |
| RA | 2,451,787 | C→T | A184T (GCC→ACC) | yfcS ← | putative fimbrial chaperone YfcS |
| RA | 2,477,517 | T→C | E38G (GAA→GGA) | dsdC ← | DNA‑binding transcriptional dual regulator DsdC |
| RA | 2,483,224 | A→G | L39S (TTA→TCA) | emrK ← | tripartite efflux pump membrane fusion protein EmrK |
| RA | 2,483,477 | (A)8→7 | intergenic (‑138/‑278) | emrK ← / → evgA | tripartite efflux pump membrane fusion protein EmrK/DNA‑binding transcriptional activator EvgA |
| RA | 2,489,635 | G→A | I184I (ATC→ATT) | yfdV ← | putative transport protein YfdV |
| RA | 2,498,376 | T→C | intergenic (‑81/‑295) | alaC ← / → ypdA | glutamate‑‑pyruvate aminotransferase AlaC/sensory histidine kinase YpdA |
| RA | 2,498,790 | C→T | H40H (CAC→CAT) | ypdA → | sensory histidine kinase YpdA |
| RA | 2,499,544 | Δ1 bp | coding (874/1698 nt) | ypdA → | sensory histidine kinase YpdA |
| RA | 2,516,215 | Δ1 bp | coding (1618/2190 nt) | pdeA ← | putative c‑di‑GMP phosphodiesterase PdeA |
| RA | 2,517,367 | (A)5→4 | coding (466/2190 nt) | pdeA ← | putative c‑di‑GMP phosphodiesterase PdeA |
| RA | 2,517,703 | G→A | L44L (CTG→TTG) | pdeA ← | putative c‑di‑GMP phosphodiesterase PdeA |
| RA | 2,520,945 | G→A | noncoding (15/76 nt) | valU → | tRNA‑Val |
| RA | 2,526,860 | T→C | intergenic (‑4/‑86) | yfeR ← / → yfeH | putative LysR‑type DNA‑binding transcriptional regulator YfeR/putative solute:Na(+) symporter |
| RA | 2,532,981 | C→T | G191G (GGC→GGT) | cysK → | O‑acetylserine sulfhydrylase A |
| RA | 2,575,236 | T→C | A74A (GCA→GCG) | eutP ← | putative ethanolamine utilization protein EutP with nucleoside triphosphate hydrolase domain |
| RA | 2,588,353 | C→T | V253V (GTC→GTT) | acrD → | multidrug efflux pump RND permease AcrD |
| RA | 2,592,808 | (T)5→4 | coding (47/201 nt) | ypfN → | UPF0370 protein YpfN |
| RA | 2,597,902 | T→C | K322E (AAA→GAA) | bamC ← | outer membrane protein assembly factor BamC |
| RA | 2,601,519 | G→A | A107T (GCC→ACC) | hyfA → | hydrogenase 4 component A |
| RA | 2,602,017 | (C)7→8 | coding (200/2019 nt) | hyfB → | hydrogenase 4 component B |
| RA | 2,602,223 | (T)5→4 | coding (406/2019 nt) | hyfB → | hydrogenase 4 component B |
| RA | 2,607,268 | T→C | F118L (TTC→CTC) | hyfF → | hydrogenase 4 component F |
| RA | 2,626,871 | A→G | C690R (TGC→CGC) | pdeF ← | cyclic di‑GMP phosphodiesterase PdeF |
| RA | 2,637,925 | C→A | R243L (CGT→CTT) | bamB ← | outer membrane protein assembly factor BamB |
| RA | 2,645,776 | C→T | G517D (GGC→GAC) | pbpC ← | peptidoglycan glycosyltransferase PbpC |
| RA | 2,669,174 | A→G | H48R (CAC→CGC) | hcaE → | putative 3‑phenylpropionate/cinnamate dioxygenase subunit alpha |
| RA | 2,672,278 | G→A | G78S (GGT→AGT) | hcaD → | putative 3‑phenylpropionate/cinnamate dioxygenase ferredoxin reductase subunit |
| RA | 2,693,373 | G→C | A724G (GCC→GGC) | purL ← | phosphoribosylformylglycinamide synthetase |
| RA | 2,717,182 | C→T | T143T (ACC→ACT) | ung → | uracil‑DNA glycosylase |
| RA | 2,717,817 | C→T | A238T (GCG→ACG) | yfiF ← | putative methyltransferase |
| RA | 2,720,128 | C→T | A59V (GCC→GTC) | patZ → | peptidyl‑lysine acetyltransferase |
| RA | 2,732,542 | Δ1 bp | coding (1632/2574 nt) | clpB ← | ClpB chaperone |
| RA | 2,733,607 | A→G | R189R (CGT→CGC) | clpB ← | ClpB chaperone |
| JC JC | 2,737,118 | IS1 (+) +8 bp | intergenic (+235/‑29) | bamD → / → raiA | outer membrane protein assembly factor BamD/stationary phase translation inhibitor and ribosome stability factor |
| RA | 2,738,716 | T→C | I324I (ATT→ATC) | pheA → | fused chorismate mutase/prephenate dehydratase |
| RA | 2,755,418 | C→A | intergenic (+40/‑175) | smpB → / → ssrA | SsrA‑binding protein/tmRNA |
| RA | 2,758,557 | (A)5→4 | coding (44/957 nt) | yfjH ← | CP4‑57 prophage; protein YfjH |
| RA | 2,759,898 | G→A | C305Y (TGC→TAC) | yfjI → | CP4‑57 prophage; protein YfjI |
| RA | 2,763,869 | (T)7→8 | coding (1285/1617 nt) | abpA ← | CP4‑57 prophage; anti‑bacteriophage protein |
| RA | 2,766,859 | (T)7→8 | coding (942/1074 nt) | rnlA → | CP4‑57 prophage; RNase LS, toxin of the RnlAB toxin‑antitoxin system |
| RA | 2,773,369 | (A)7→6 | coding (52/1704 nt) | yfjW → | CP4‑57 prophage; uncharacterized protein YfjW |
| RA | 2,783,986 | C→T | L148L (TTG→TTA) | ypjB ← | DUF5508 domain‑containing protein YpjB |
| RA | 2,787,520 | C→T | pseudogene (1124/2253 nt) | ygaQ → | putative uncharacterized protein YgaQ |
| RA | 2,796,579 | T→C | I70V (ATC→GTC) | kbp ← | K(+) binding protein |
| RA | 2,797,709 | T→C | C64R (TGC→CGC) | ygaP → | thiosulfate sulfurtransferase YgaP |
| RA | 2,813,126 | T→C | F171L (TTC→CTC) | emrB → | multidrug efflux pump membrane subunit EmrB |
| RA | 2,819,073 | A→G | V25A (GTA→GCA) | csrA ← | carbon storage regulator |
| RA | 2,821,522 | G→A | P164S (CCA→TCA) | alaS ← | alanine‑‑tRNA ligase/DNA‑binding transcriptional repressor |
| RA | 2,852,276 | T→C | A47A (GCT→GCC) | hypD → | Fe‑(CN)2CO cofactor assembly scaffold protein HypD |
| RA | 2,858,782 | A→C | T564P (ACC→CCC) | mutS → | DNA mismatch repair protein MutS |
| RA | 2,865,111 | T→C | I4T (ATT→ACT) | ygbN → | putative transporter YgbN |
| RA | 2,871,206 | Δ1 bp | coding (99/1050 nt) | truD ← | tRNA pseudouridine(13) synthase |
| RA | 2,887,571 | Δ1 bp | intergenic (+163/+7) | sokX → / ← cysH | small RNA SokX/phosphoadenosine phosphosulfate reductase |
| RA | 2,889,110 | T→C | K330K (AAA→AAG) | cysI ← | sulfite reductase, hemoprotein subunit |
| RA | 2,898,999 | Δ1 bp | coding (420/1455 nt) | ygcU ← | putative FAD‑containing dehydrogenase |
| RA | 2,902,559 | G→A | D222N (GAT→AAT) | ygcE → | putative sugar kinase YgcE |
| RA | 2,905,487 | C→T | intergenic (‑69/‑70) | queE ← / → yqcG | putative 7‑carboxy‑7‑deazaguanine synthase QueE/cell envelope stress response protein YqcG |
| RA | 2,918,157 | Δ1 bp | coding (1229/1341 nt) | gudD ← | D‑glucarate dehydratase |
| RA | 2,922,977 | T→C | E3G (GAA→GGA) | yqcA ← | putative flavodoxin YqcA |
| RA | 2,928,914 | C→T | S229F (TCT→TTT) | sdaC → | serine:H(+) symporter SdaC |
| RA | 2,945,771 | C→T | A24A (GCG→GCA) | tcdA ← | tRNA threonylcarbamoyladenosine dehydratase |
| RA | 2,947,713 | (T)7→8 | intergenic (+30/+44) | metV → / ← amiC | tRNA‑Met/N‑acetylmuramoyl‑L‑alanine amidase C |
| RA | 2,948,577 | G→C | A145G (GCC→GGC) | amiC ← | N‑acetylmuramoyl‑L‑alanine amidase C |
| RA | 2,960,513 | T→C | D639G (GAT→GGT) | recC ← | exodeoxyribonuclease V subunit RecC |
| RA | 2,962,983 | (T)5→4 | coding (174/408 nt) | ygdB ← | DUF2509 domain‑containing protein YgdB |
| RA | 2,967,332 | Δ1 bp | coding (1103/2247 nt) | ptsP ← | phosphoenolpyruvate‑protein phosphotransferase PtsP |
| RA | 2,983,085 | (A)6→5 | coding (174/762 nt) | kduD ← | putative 2‑keto‑3‑deoxy‑D‑gluconate dehydrogenase |
| RA | 2,986,420 | C→T | H192Y (CAC→TAC) | yqeG → | putative transporter YqeG |
| RA | 2,989,072 | G→A | E191K (GAA→AAA) | yqeI → | putative transcriptional regulator YqeI |
| RA | 2,989,382 | A→G | T27A (ACT→GCT) | yqeJ → | protein YqeJ |
| RA | 2,989,488 | (A)8→7 | coding (185/483 nt) | yqeJ → | protein YqeJ |
| RA | 2,993,623 | A→T | intergenic (+153/‑15) | ygeH → / → ygeI | putative transcriptional regulator YgeH/protein YgeI |
| RA | 2,993,754 | T→A | D39E (GAT→GAA) | ygeI → | protein YgeI |
| RA | 2,998,727 | G→A | N34N (AAC→AAT) | ygeQ ← | protein YgeQ |
| RA | 2,998,759 | Δ1 bp | coding (70/795 nt) | ygeQ ← | protein YgeQ |
| RA | 2,999,715 | G→A | T59T (ACC→ACT) | ygeR ← | LysM domain‑containing putative peptidase lipoprotein YgeR |
| RA | 3,003,097 | C→T | H162Y (CAT→TAT) | xdhB → | putative xanthine dehydrogenase FAD‑binding subunit XdhB |
| RA | 3,005,966 | G→A | intergenic (‑180/‑296) | ygeV ← / → ygeW | putative sigma(54)‑dependent transcriptional regulator YgeV/putative carbamoyltransferase YgeW |
| RA | 3,006,049 | (A)7→6 | intergenic (‑263/‑213) | ygeV ← / → ygeW | putative sigma(54)‑dependent transcriptional regulator YgeV/putative carbamoyltransferase YgeW |
| RA | 3,014,976 | C→T | A28T (GCT→ACT) | yqeC ← | uncharacterized protein YqeC |
| RA | 3,028,232 | C→A | A371D (GCT→GAT) | ghxQ → | guanine/hypoxanthine transporter GhxQ |
| RA | 3,030,090 | A→G | V281A (GTC→GCC) | ygfT ← | fused putative oxidoreductase, Fe‑S subunit and nucleotide‑binding subunit |
| RA | 3,030,758 | G→C | H58Q (CAC→CAG) | ygfT ← | fused putative oxidoreductase, Fe‑S subunit and nucleotide‑binding subunit |
| RA | 3,057,133 | (A)7→8 | intergenic (+142/+45) | sibC → / ← serA | small RNA SibC/phosphoglycerate dehydrogenase |
| RA | 3,058,659 | (C)5→4 | intergenic (‑249/+7) | serA ← / ← rpiA | phosphoglycerate dehydrogenase/ribose‑5‑phosphate isomerase A |
| RA | 3,060,772 | (T)8→9 | intergenic (+126/‑78) | argP → / → scpA | DNA‑binding transcriptional dual regulator ArgP/methylmalonyl‑CoA mutase |
| RA | 3,064,651 | A→G | H220R (CAC→CGC) | scpB → | methylmalonyl‑CoA decarboxylase |
| RA | 3,077,875 | C→T | A329T (GCT→ACT) | cmtA ← | mannitol‑specific PTS enzyme IICB component CmtA |
| RA | 3,079,659 | Δ1 bp | coding (1977/1992 nt) | tktA ← | transketolase 1 |
| RA | 3,086,426 | Δ1 bp | coding (225/252 nt) | yqgD ← | DUF2684 domain‑containing protein YqgD |
| RA | 3,099,780 | Δ1 bp | coding (949/1047 nt) | ansB ← | L‑asparaginase 2 |
| RA | 3,107,146 | T→C | Q670Q (CAA→CAG) | speC ← | ornithine decarboxylase, biosynthetic |
| RA | 3,119,442 | (A)7→6 | intergenic (‑330/+155) | yghJ ← / ← glcA | putative lipoprotein YghJ/glycolate/lactate:H(+) symporter GlcA |
| RA | 3,123,304 | C→T | A168T (GCC→ACC) | glcB ← | malate synthase G |
| RA | 3,124,738 | G→A | A241V (GCC→GTC) | glcF ← | glycolate dehydrogenase, putative iron‑sulfur subunit |
| RA | 3,134,388 | T→C | I86I (ATT→ATC) | yghT → | putative ATP‑binding protein YghT |
| RA | 3,139,164 | Δ1 bp | coding (438/867 nt) | yghU → | disulfide reductase/organic hydroperoxide reductase |
| RA | 3,139,574 | A→T | E283V (GAA→GTA) | yghU → | disulfide reductase/organic hydroperoxide reductase |
| RA | 3,141,584 | A→G | F469S (TTC→TCC) | hybC ← | hydrogenase 2 large subunit |
| RA | 3,182,453 | C→A | intergenic (‑19/‑97) | ygiD ← / → zupT | 4,5‑DOPA dioxygenase extradiol/heavy metal divalent cation transporter ZupT |
| RA | 3,184,351 | T→C | N39S (AAC→AGC) | ribB ← | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| RA | 3,187,697 | (A)6→7 | pseudogene (266/2434 nt) | yqiG → | putative outer membrane usher protein YqiG |
| RA | 3,189,625 | C→A | pseudogene (2194/2434 nt) | yqiG → | putative outer membrane usher protein YqiG |
| RA | 3,190,185 | T→C | L102P (CTT→CCT) | yqiH → | putative fimbrial chaperone YqiH |
| RA | 3,193,105 | G→A | R81H (CGC→CAC) | yqiK → | protein YqiK |
| RA | 3,194,572 | (T)6→5 | intergenic (+47/+149) | yqiK → / ← sibD | protein YqiK/small RNA SibD |
| RA | 3,195,223 | Δ1 bp | noncoding (18/144 nt) | sibE ← | small RNA SibE |
| RA | 3,200,368 | G→A | Q200* (CAG→TAG) | ygiF ← | inorganic triphosphatase |
| RA | 3,207,553 | C→T | P61P (CCC→CCT) | ttdB → | L(+)‑tartrate dehydratase subunit beta |
| RA | 3,219,561 | A→G | K23R (AAG→AGG) | patA → | putrescine aminotransferase |
| RA | 3,243,047 | A→T | Y90N (TAT→AAT) | uxaA ← | D‑altronate dehydratase |
| RA | 3,243,465 | C→A | R426L (CGC→CTC) | uxaC ← | D‑glucoronate/D‑galacturonate isomerase |
| RA | 3,257,401 | G→T | H204N (CAT→AAT) | cyuP ← | putative D/L‑serine transporter |
| RA | 3,264,691 | Δ1 bp | coding (327/1332 nt) | tdcC ← | threonine/serine:H(+) symporter |
| RA | 3,265,761 | C→A | V90F (GTT→TTT) | tdcB ← | catabolic threonine dehydratase |
| RA | 3,268,304 | (C)6→5 | coding (451/540 nt) | yhaB → | protein YhaB |
| RA | 3,269,345 | A→C | I311L (ATC→CTC) | yhaC → | uncharacterized protein YhaC |
| RA | 3,280,706 | A→G | pseudogene (6/402 nt) | agaW → | N‑acetyl‑D‑galactosamine specific PTS truncated enzyme IIC component |
| RA | 3,283,066 | Δ1 bp | coding (1091/1155 nt) | agaS → | putative galactosamine‑6‑phosphate deaminase/isomerase |
| RA | 3,286,033 | G→A | G186S (GGC→AGC) | agaD → | galactosamine‑specific PTS enzyme IID component |
| RA | 3,302,238 | C→A | L252I (CTC→ATC) | yhbU → | putative peptidase YhbU |
| RA | 3,302,518 | Δ1 bp | coding (30/879 nt) | yhbV → | putative peptidase YhbV |
| RA | 3,310,694 | C→T | D159N (GAC→AAC) | pnp ← | polynucleotide phosphorylase |
| RA | 3,313,786 | C→T | L743L (CTG→CTA) | infB ← | translation initiation factor IF‑2 |
| RA | 3,314,620 | T→C | V465V (GTA→GTG) | infB ← | translation initiation factor IF‑2 |
| RA | 3,317,713 | C→T | E98E (GAG→GAA) | rimP ← | ribosome maturation factor RimP |
| RA | 3,324,584 | C→A | G110C (GGC→TGC) | folP ← | dihydropteroate synthase |
| RA | 3,328,268 | A→G | F150L (TTT→CTT) | greA ← | transcription elongation factor GreA |
| RA | 3,354,739 | Δ1 bp | coding (15/4461 nt) | gltB → | glutamate synthase subunit GltB |
| RA | 3,360,842 | T→C | intergenic (+226/‑334) | gltD → / → gltF | glutamate synthase subunit GltD/periplasmic protein GltF |
| RA | 3,362,620 | T→C | F170S (TTT→TCT) | yhcA → | putative fimbrial chaperone YhcA |
| RA | 3,362,820 | C→T | T5M (ACG→ATG) | yhcD → | putative fimbrial usher protein YhcD |
| RA | 3,371,572 | C→T | G335S (GGT→AGT) | nanT ← | N‑acetylneuraminate:H(+) symporter |
| RA | 3,375,973 | G→A | G369S (GGC→AGC) | dcuD → | putative transporter DcuD |
| RA | 3,381,055 | C→T | L105L (CTG→TTG) | degQ → | periplasmic serine endoprotease |
| RA | 3,381,442 | G→A | A234T (GCG→ACG) | degQ → | periplasmic serine endoprotease |
| RA | 3,385,853 | (T)8→9 | intergenic (+52/+4) | yhcN → / ← yhcO | DUF1471 domain‑containing stress‑induced protein YhcN/putative barnase inhibitor |
| RA | 3,390,209 | G→A | L230L (CTG→CTA) | aaeR → | LysR‑type transcriptional regulator AaeR |
| RA | 3,393,640 | T→C | E873E (GAA→GAG) | yhdP ← | AsmA2 domain‑containing protein |
| RA | 3,402,941 | A→G | F131S (TTC→TCC) | csrD ← | regulator of CsrB and CsrC decay |
| RA | 3,411,849 | T→C | F66S (TTT→TCT) | yhdJ → | DNA adenine methyltransferase |
| RA | 3,429,412 | T→C | N59N (AAT→AAC) | yrdA → | protein YrdA |
| RA | 3,431,553 | G→A | A137V (GCC→GTC) | yrdD ← | putative DNA topoisomerase |
| RA | 3,459,753 | T→C | I472T (ATA→ACA) | gspE → | Type II secretion system protein GspE |
| RA | 3,460,788 | C→T | F324F (TTC→TTT) | gspF → | Type II secretion system protein GspF |
| RA | 3,467,731 | G→A | A708V (GCA→GTA) | chiA ← | endochitinase |
| RA | 3,469,803 | A→G | C17C (TGT→TGC) | chiA ← | endochitinase |
| RA | 3,471,702 | A→T | F605I (TTT→ATT) | fusA ← | elongation factor G |
| RA | 3,485,644 | C→T | G59R (GGG→AGG) | yhfA ← | OsmC family protein |
| RA | 3,493,804 | T→C | intergenic (+55/‑207) | tsgA → / → nirB | putative transporter TsgA/nitrite reductase catalytic subunit NirB |
| RA | 3,497,365 | G→A | M121I (ATG→ATA) | nirC → | nitrite transporter NirC |
| RA | 3,500,149 | G→A | L80L (CTG→CTA) | frlA → | fructoselysine/psicoselysine transporter |
| RA | 3,545,060 | C→A | P60H (CCC→CAC) | yhgH → | DNA utilization protein YhgH |
| RA | 3,565,112 | G→A | G490G (GGC→GGT) | glgP ← | glycogen phosphorylase |
| RA | 3,568,321 | G→A | G336G (GGC→GGT) | glgC ← | glucose‑1‑phosphate adenylyltransferase |
| RA | 3,569,344 | (T)6→5 | intergenic (‑16/+2) | glgC ← / ← glgX | glucose‑1‑phosphate adenylyltransferase/limit dextrin alpha‑1,6‑glucohydrolase |
| RA | 3,571,289 | Δ1 bp | coding (31/1974 nt) | glgX ← | limit dextrin alpha‑1,6‑glucohydrolase |
| RA | 3,577,424 | G→A | L57L (CTG→TTG) | gntK ← | D‑gluconate kinase, thermostable |
| RA | 3,583,237 | T→A | pseudogene (200/390 nt) | yrhA → | putative uncharacterized protein YrhA |
| RA | 3,586,418 | (T)6→7 | coding (406/1743 nt) | ggt ← | glutathione hydrolase proenzyme |
| RA | 3,586,933 | A→T | intergenic (‑110/‑10) | ggt ← / → yhhA | glutathione hydrolase proenzyme/DUF2756 domain‑containing protein YhhA |
| RA | 3,595,737 | G→T | L223I (CTC→ATC) | livH ← | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH |
| RA | 3,595,767 | C→A | A213S (GCG→TCG) | livH ← | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH |
| RA | 3,597,808 | T→C | intergenic (‑248/‑176) | livK ← / → panZ | L‑leucine/L‑phenylalanine ABC transporter periplasmic binding protein/PanD maturation factor |
| RA | 3,605,159 | C→T | Q61* (CAG→TAG) | yhhL → | DUF1145 domain‑containing protein YhhL |
| RA | 3,605,436 | G→T | R59S (CGC→AGC) | yhhM ← | DUF2500 domain‑containing protein YhhM |
| RA | 3,609,208 | (A)5→4 | intergenic (‑212/‑9) | tusA ← / → yhhQ | sulfur transfer protein TusA/putative queuosine precursor transporter |
| RA | 3,611,584 | A→G | F50F (TTT→TTC) | yhhS ← | putative transporter YhhS |
| RA | 3,634,918 | T→C | F26F (TTT→TTC) | yhiM → | inner membrane protein with a role in acid resistance |
| RA | 3,645,285 | A→G | intergenic (‑103/‑100) | prlC ← / → rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase |
| RA | 3,648,020 | C→T | intergenic (‑232/‑43) | dinQ ← / → agrA | UV inducible membrane toxin DinQ/small RNA AgrA |
| RA | 3,651,128 | (T)7→8 | intergenic (+466/‑163) | arsC → / → yhiS | arsenate reductase/putative uncharacterized protein YhiS |
| RA | 3,658,962 | (C)5→4 | intergenic (+69/‑30) | gadE → / → gadF | DNA‑binding transcriptional activator GadE/small regulatory RNA GadF |
| RA | 3,667,617 | (A)6→5 | intergenic (‑37/+174) | gadA ← / ← ccp | glutamate decarboxylase A/cytochrome c peroxidase |
| RA | 3,674,725 | G→T | intergenic (+350/‑61) | yhjD → / → yhjE | putative transporter YhjD/putative transporter YhjE |
| RA | 3,679,276 | +G | intergenic (‑89/‑143) | pdeH ← / → kdgK | c‑di‑GMP phosphodiesterase PdeH/2‑dehydro‑3‑deoxygluconokinase |
| RA | 3,704,816 | A→T | D325E (GAT→GAA) | dppB ← | dipeptide ABC transporter membrane subunit DppB |
| RA | 3,708,650 | T→C | noncoding (43/77 nt) | proK ← | tRNA‑Pro |
| RA | 3,710,538 | G→T | intergenic (‑63/+261) | eptB ← / ← yhjX | Kdo2‑lipid A phosphoethanolamine 7''‑transferase/putative pyruvate transporter |
| RA | 3,710,634 | Δ1 bp | intergenic (‑159/+165) | eptB ← / ← yhjX | Kdo2‑lipid A phosphoethanolamine 7''‑transferase/putative pyruvate transporter |
| RA | 3,713,323 | Δ1 bp | coding (232/564 nt) | tag → | 3‑methyl‑adenine DNA glycosylase I, constitutive |
| RA | 3,719,397 | Δ1 bp | intergenic (‑353/‑81) | yiaF ← / → yiaG | DUF3053 domain‑containing protein YiaF/putative DNA‑binding transcriptional regulator YiaG |
| RA | 3,737,646 | G→A | T50T (ACG→ACA) | malS → | alpha‑amylase |
| RA | 3,744,337 | (A)7→6 | coding (10/474 nt) | yiaM → | 2,3‑diketo‑L‑gulonate:Na(+) symporter ‑ membrane subunit |
| RA | 3,760,469 | T→C | S261G (AGT→GGT) | selA ← | selenocysteine synthase |
| RA | 3,775,361 | Δ1 bp | coding (938/1149 nt) | mtlD → | mannitol‑1‑phosphate 5‑dehydrogenase |
| RA | 3,776,553 | (T)5→6 | intergenic (‑173/‑112) | yibT ← / → yibL | protein YibT/DUF2810 domain‑containing protein YibL |
| RA | 3,778,242 | (G)5→4 | coding (844/1656 nt) | lldP → | lactate/glycolate:H(+) symporter LldP |
| RA | 3,785,138 | (A)8→7 | intergenic (‑123/‑122) | yibN ← / → gpmM | putative sulfurtransferase YibN/2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| RA | 3,791,313 | Δ1 bp | coding (33/1026 nt) | tdh ← | threonine dehydrogenase |
| RA | 3,793,741 | A→G | intergenic (‑58/‑246) | htrL ← / → rfaD | protein HtrL/ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| RA | 3,795,757 | G→C | A277P (GCG→CCG) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,797,159 | (A)6→5 | coding (212/1260 nt) | waaL → | O‑antigen ligase |
| RA | 3,807,402 | T→C | T233A (ACT→GCT) | waaQ ← | lipopolysaccharide core heptosyltransferase 3 |
| RA | 3,808,417 | (A)8→9 | intergenic (‑319/‑123) | waaQ ← / → waaA | lipopolysaccharide core heptosyltransferase 3/KDO transferase |
| RA | 3,815,808 | (A)8→7 | intergenic (‑40/+55) | pyrE ← / ← rph | orotate phosphoribosyltransferase/truncated RNase PH |
| RA | 3,826,047 | A→T | I280F (ATC→TTC) | recG → | ATP‑dependent DNA helicase RecG |
| RA | 3,833,590 | G→A | C316C (TGC→TGT) | yicI ← | alpha‑D‑xyloside xylohydrolase |
| RA | 3,855,981 | T→C | G109G (GGA→GGG) | yidH ← | conserved inner membrane protein YidH |
| RA | 3,863,817 | A→T | intergenic (‑214/‑82) | glvC ← / → yidP | putative PTS enzyme II component GlvC/putative DNA‑binding transcriptional regulator YidP |
| RA | 3,866,522 | G→C | P126A (CCC→GCC) | ibpB ← | small heat shock protein IbpB |
| RA | 3,869,009 | G→A | H101Y (CAT→TAT) | yidR ← | DUF3748 domain‑containing galacturonate catabolism protein YidR |
| RA | 3,876,270 | A→G | I228T (ATT→ACT) | yidA ← | sugar phosphatase YidA |
| RA | 3,883,138 | C→G | V198L (GTG→CTG) | dnaA ← | chromosomal replication initiator protein DnaA |
| RA | 3,899,378 | T→C | T6A (ACC→GCC) | yieK ← | putative glucosamine‑6‑phosphate deaminase YieK |
| RA | 3,900,470 | C→T | V36V (GTG→GTA) | yieL ← | putative hydrolase YieL |
| RA | 3,912,061 | T→C | E536E (GAA→GAG) | glmS ← | L‑glutamine‑‑D‑fructose‑6‑phosphate aminotransferase |
| RA | 3,917,346 | G→A | I10I (ATC→ATT) | atpD ← | ATP synthase F1 complex subunit beta |
| RA | 3,918,625 | G→A | S411S (TCC→TCT) | atpA ← | ATP synthase F1 complex subunit alpha |
| RA | 3,918,962 | T→A | E299V (GAG→GTG) | atpA ← | ATP synthase F1 complex subunit alpha |
| RA | 3,941,650 | A→G | intergenic (‑323/‑158) | yieP ← / → rrsC | putative transcriptional regulator YieP/16S ribosomal RNA |
| RA | 3,949,783 | (T)7→6 | coding (187/1521 nt) | yifB ← | putative magnesium chelatase YifB |
| RA | 3,950,476 | (T)8→9 | intergenic (+56/‑31) | ilvL → / → ilvX | ilvXGMEDA operon leader peptide/uncharacterized protein IlvX |
| RA | 3,960,055 | Δ1 bp | pseudogene (406/449 nt) | yifN ← | putative toxin YifN |
| RA | 3,960,934 | G→T | T86T (ACG→ACT) | rep → | ATP‑dependent DNA helicase Rep |
| RA | 3,968,005 | (A)7→8 | coding (90/1104 nt) | rfe → | UDP‑N‑acetylglucosamine‑‑undecaprenyl‑phosphate N‑acetylglucosaminephosphotransferase |
| RA | 3,979,952 | A→G | *451* (TAA→TGA) | wzyE → | enterobacterial common antigen polymerase |
| RA | 3,983,380 | C→A | R141R (CGC→CGA) | aslB → | putative anaerobic sulfatase maturation enzyme AslB |
| RA | 3,994,218 | T→C | S123S (AGT→AGC) | yzcX → | protein YzcX |
| RA | 4,003,238 | G→A | intergenic (‑45/+50) | yigG ← / ← rarD | inner membrane protein/putative transporter RarD |
| RA | 4,007,952 | A→G | K66E (AAA→GAA) | rhtC → | L‑threonine exporter |
| RA | 4,033,626 | A→G | Y161C (TAT→TGT) | trkH → | K(+) transporter TrkH |
| RA | 4,048,459 | C→T | A498A (GCC→GCT) | polA → | DNA polymerase I |
| RA | 4,049,998 | Δ1 bp | noncoding (100/109 nt) | spf → | small regulatory RNA Spot 42 |
| RA | 4,084,906 | +G | coding (917/3051 nt) | fdoG ← | formate dehydrogenase O subunit alpha |
| RA | 4,090,946 | G→A | A474V (GCC→GTC) | frvB ← | putative PTS enzyme IIBC component FrvB |
| RA | 4,093,381 | G→A | R20C (CGT→TGT) | rhaM ← | L‑rhamnose mutarotase |
| RA | 4,098,418 | C→T | A228V (GCC→GTC) | rhaS → | DNA‑binding transcriptional activator RhaS |
| RA | 4,098,551 | A→G | G272G (GGA→GGG) | rhaS → | DNA‑binding transcriptional activator RhaS |
| RA | 4,108,387 | G→C | G279A (GGT→GCT) | pfkA → | 6‑phosphofructokinase I |
| RA | 4,109,886 | T→C | intergenic (+63/‑44) | sbp → / → cdh | sulfate/thiosulfate ABC transporter periplasmic binding protein Sbp/CDP‑diacylglycerol diphosphatase |
| RA | 4,110,248 | G→T | A107S (GCG→TCG) | cdh → | CDP‑diacylglycerol diphosphatase |
| RA | 4,112,269 | G→A | intergenic (‑55/‑46) | yiiQ ← / → yiiR | DUF1454 domain‑containing protein YiiQ/DUF805 domain‑containing protein YiiR |
| RA | 4,123,764 | G→A | A231A (GCC→GCT) | cytR ← | DNA‑binding transcriptional repressor CytR |
| RA | 4,127,160 | G→A | D50N (GAT→AAT) | rpmE → | 50S ribosomal subunit protein L31 |
| RA | 4,128,696 | G→T | A9S (GCA→TCA) | metB → | O‑succinylhomoserine(thiol)‑lyase/O‑ succinylhomoserine lyase |
| RA | 4,131,924 | C→T | S697L (TCG→TTG) | metL → | fused aspartate kinase/homoserine dehydrogenase 2 |
| RA | 4,136,921 | (G)5→4 | coding (814/906 nt) | yijE → | cystine exporter |
| RA | 4,142,492 | A→T | intergenic (‑271/‑38) | ptsA ← / → frwC | putative PTS multiphosphoryl transfer protein PtsA/putative PTS enzyme IIC component FrwC |
| RA | 4,147,894 | C→A | A142S (GCA→TCA) | yijO ← | putative DNA‑binding transcriptional regulator YijO |
| RA | 4,156,840 | A→G | intergenic (+51/‑10) | argB → / → argH | acetylglutamate kinase/argininosuccinate lyase |
| RA | 4,163,286 | (A)5→4 | intergenic (‑16/‑353) | trmA ← / → btuB | tRNA m(5)U54 methyltransferase/cobalamin/cobinamide outer membrane transporter |
| RA | 4,175,853 | (T)6→5 | intergenic (+24/‑91) | thrT → / → tufB | tRNA‑Thr/translation elongation factor Tu 2 |
| RA | 4,192,531 | G→A | S35S (AGC→AGT) | thiG ← | 1‑deoxy‑D‑xylulose 5‑phosphate:thiol sulfurtransferase |
| RA | 4,219,725 | A→G | N377S (AAC→AGC) | aceK → | isocitrate dehydrogenase kinase/phosphatase |
| RA | 4,221,347 | T→C | I381V (ATT→GTT) | arpA ← | regulator of acetyl CoA synthetase |
| RA | 4,222,138 | G→A | T117I (ACT→ATT) | arpA ← | regulator of acetyl CoA synthetase |
| RA | 4,232,891 | C→T | V115I (GTC→ATC) | lysC ← | aspartate kinase III |
| RA | 4,251,346 | A→G | pseudogene (644/1581 nt) | yjbI → | pentapeptide repeats‑containing protein YjbI |
| RA | 4,252,298 | C→T | intergenic (+15/‑208) | yjbI → / → ubiC | pentapeptide repeats‑containing protein YjbI/chorismate lyase |
| RA | 4,272,220 | A→G | I551T (ATT→ACT) | uvrA ← | excision nuclease subunit A |
| RA | 4,272,422 | C→T | A484T (GCA→ACA) | uvrA ← | excision nuclease subunit A |
| RA | 4,288,159 | T→C | R132R (CGT→CGC) | nrfA → | cytochrome c552 nitrite reductase |
| RA | 4,297,609 | G→A | Y586Y (TAC→TAT) | fdhF ← | formate dehydrogenase H |
| RA | 4,297,871 | T→C | Q499R (CAG→CGG) | fdhF ← | formate dehydrogenase H |
| RA | 4,313,074 | (A)7→8 | intergenic (‑83/‑276) | alsR ← / → rpiB | DNA‑binding transcriptional repressor AlsR/allose‑6‑phosphate isomerase/ribose‑5‑phosphate isomerase B |
| RA | 4,318,511 | Δ1 bp | coding (254/759 nt) | phnK ← | carbon‑phosphorus lyase subunit PhnK |
| RA | 4,333,425 | Δ1 bp | coding (526/669 nt) | basR ← | DNA‑binding transcriptional dual regulator BasR |
| RA | 4,337,207 | C→T | L241L (CTG→CTA) | adiY ← | DNA‑binding transcriptional activator AdiY |
| RA | 4,339,401 | T→C | N374S (AAC→AGC) | adiA ← | arginine decarboxylase, degradative |
| RA | 4,342,680 | (A)5→4 | coding (770/1356 nt) | melA → | alpha‑galactosidase |
| RA | 4,343,621 | T→C | L85L (TTG→CTG) | melB → | melibiose:H(+)/Na(+)/Li(+) symporter |
| RA | 4,347,470 | C→T | G425G (GGG→GGA) | dcuB ← | anaerobic C4‑dicarboxylate transporter DcuB |
| RA | 4,351,047 | (T)7→8 | coding (616/1632 nt) | dcuS ← | sensory histidine kinase DcuS |
| RA | 4,367,827 | A→G | I167I (ATT→ATC) | aspA ← | aspartate ammonia‑lyase |
| RA | 4,371,109 | G→A | V29I (GTT→ATT) | groL → | chaperonin GroEL |
| RA | 4,372,049 | T→C | I342T (ATC→ACC) | groL → | chaperonin GroEL |
| RA | 4,390,171 | T→C | N64D (AAC→GAC) | psd ← | phosphatidylserine decarboxylase proenzyme |
| RA | 4,399,875 | A→G | E208E (GAA→GAG) | miaA → | tRNA dimethylallyltransferase |
| RA | 4,419,570 | T→C | E19G (GAG→GGG) | ulaG ← | L‑ascorbate‑6‑phosphate lactonase |
| RA | 4,425,249 | C→T | R44R (CGC→CGT) | rpsF → | 30S ribosomal subunit protein S6 |
| RA | 4,429,686 | T→C | intergenic (+131/‑178) | fklB → / → cycA | FKBP‑type peptidyl‑prolyl cis‑trans isomerase FklB/serine/alanine/glycine/cycloserine:H(+)symporter |
| RA | 4,453,747 | G→A | V55V (GTG→GTA) | yjfF → | galactofuranose ABC transporter putative membrane subunit YjtF |
| RA | 4,457,853 | Δ1 bp | coding (13/552 nt) | yjgA ← | DUF615 domain‑containing protein YjgA |
| RA | 4,459,139 | Δ1 bp | coding (1181/1353 nt) | pmbA → | metalloprotease PmbA |
| RA | 4,477,066 | G→A | V544I (GTT→ATT) | yjgL → | protein YjgL |
| RA | 4,478,540 | A→C | E23A (GAA→GCA) | rraB → | ribonuclease E inhibitor protein B |
| RA | 4,481,269 | G→A | P857S (CCT→TCT) | valS ← | valine‑‑tRNA ligase |
| RA | 4,486,041 | T→C | intergenic (‑90/‑177) | pepA ← / → lptF | aminopeptidase A/I/lipopolysaccharide transport system protein LptF |
| RA | 4,486,291 | T→A | I25N (ATC→AAC) | lptF → | lipopolysaccharide transport system protein LptF |
| RA | 4,486,821 | T→C | S202P (TCC→CCC) | lptF → | lipopolysaccharide transport system protein LptF |
| RA | 4,487,099 | A→G | G294G (GGA→GGG) | lptF → | lipopolysaccharide transport system protein LptF |
| RA | 4,502,703 | G→A | I243I (ATC→ATT) | insG ← | KpLE2 phage‑like element; IS4 putative transposase |
| RA | 4,503,704 | A→G | intergenic (‑273/‑354) | insG ← / → yjhB | KpLE2 phage‑like element; IS4 putative transposase/putative sialic acid transporter |
| RA | 4,504,741 | A→G | L228L (CTA→CTG) | yjhB → | putative sialic acid transporter |
| RA | 4,504,957 | (T)8→7 | coding (900/1218 nt) | yjhB → | putative sialic acid transporter |
| RA | 4,507,390 | T→C | pseudogene (194/255 nt) | insO → | KpLE2 phage‑like element; IS911B regulator fragment |
| RA | 4,513,865 | A→G | G148G (GGT→GGC) | fecB ← | ferric citrate ABC transporter periplasmic binding protein |
| RA | 4,514,463 | (T)5→4 | coding (2215/2325 nt) | fecA ← | ferric citrate outer membrane transporter |
| RA | 4,520,100 | A→G | I75I (ATT→ATC) | yjhU ← | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU |
| RA | 4,520,574 | (T)5→4 | intergenic (‑250/+97) | yjhU ← / ← yjhF | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU/KpLE2 phage‑like element; putative transporter YjhF |
| RA | 4,524,914 | G→T | L33M (CTG→ATG) | yjhH ← | KpLE2 phage‑like element; putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| RA | 4,525,883 | G→A | intergenic (‑80/+223) | yjhI ← / ← sgcR | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhI/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator SgcR |
| RA | 4,531,506 | A→C | V49G (GTC→GGC) | sgcX ← | KpLE2 phage‑like element; putative endoglucanase with Zn‑dependent exopeptidase domain |
| RA | 4,542,288 | Δ1 bp | coding (252/597 nt) | fimE → | regulator for fimA |
| RA | 4,548,591 | A→G | T103A (ACC→GCC) | fimG → | type 1 fimbriae minor subunit FimG |
| RA | 4,601,154 | C→T | A122T (GCC→ACC) | dnaT ← | primosomal protein DnaT |
| RA | 4,601,522 | T→C | intergenic (‑5/+102) | dnaT ← / ← yjjB | primosomal protein DnaT/putative succinate exporter YjjB |
| RA | 4,607,016 | A→G | S229P (TCT→CCT) | rsmC ← | 16S rRNA m(2)G1207 methyltransferase |
| RA | 4,638,175 | A→G | intergenic (+55/‑3) | creC → / → creD | sensory histidine kinase CreC/putative inner membrane protein |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 236069 | 236776 | 708 | 3 [2] | [0] 3 | dnaQ | DNA polymerase III subunit epsilon |
| * | * | ÷ | NC_000913 | 1209603 | 1209618 | 16 | 18 [0] | [0] 20 | stfE | e14 prophage; putative side tail fiber protein fragment |
| * | * | ÷ | NC_000913 | 1583867 | 1583899 | 33 | 3 [2] | [2] 3 | safA | two‑component system connector SafA |
| * | * | ÷ | NC_000913 | 3423731–3424234 | 3424573–3424238 | 5–843 | 3 [2] | [1] 3 | [rrfD]–[rrlD] | [rrfD],[rrlD] |
| * | * | ÷ | NC_000913 | 3762338–3764074 | 3765210–3764076 | 3–2873 | 3 [2] | [1] 3 | rhsA | rhs element protein RhsA |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1207790 = | 0 (0.000) | 15 (0.620) | 14/128 | 0.6 | 100% | coding (290/630 nt) | ycfK | e14 prophage; protein StfP |
| ? | NC_000913 | 1209619 = | 0 (0.000) | pseudogene (37/537 nt) | stfE | e14 prophage; putative side tail fiber protein fragment | |||||
| * | ? | NC_000913 | = 1207805 | 0 (0.000) | 15 (0.620) | 13/128 | 0.7 | 100% | coding (305/630 nt) | ycfK | e14 prophage; protein StfP |
| ? | NC_000913 | = 1209602 | 0 (0.000) | pseudogene (54/537 nt) | stfE | e14 prophage; putative side tail fiber protein fragment | |||||