breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	7,287	G→A	7.4%	N289N (AAC→AAT) ‡	oxaA ←	membrane protein insertase
RA	7,288	T→A	7.6%	N289I (AAC→ATC) ‡	oxaA ←	membrane protein insertase
RA	7,289	T→C	7.9%	N289D (AAC→GAC) ‡	oxaA ←	membrane protein insertase
RA	58,435	G→C	8.7%	intergenic (‑346/+342)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,437	T→A	8.7%	intergenic (‑348/+340)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,439	G→C	8.7%	intergenic (‑350/+338)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,747	T→A	12.0%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	11.9%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	59,567	T→C	6.8%	N348D (AAT→GAT)	PP_0051 ←	sigma‑54 dependent transcriptional regulator
RA	71,354	Δ1 bp	9.1%	coding (551/2055 nt)	glyS ←	glycine‑tRNA ligase subunit beta
RA	78,506	C→T	9.2%	intergenic (‑34/+27)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,507	G→C	9.2%	intergenic (‑35/+26)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,508	G→C	9.2%	intergenic (‑36/+25)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	78,509	A→G	9.2%	intergenic (‑37/+24)	fmt ← / ← def‑I	methionyl‑tRNA formyltransferase/peptide deformylase
RA	87,956	G→C	8.8%	R454R (CGC→CGG)	betC ←	choline‑sulfatase
RA	87,959	G→C	8.8%	R453R (CGC→CGG)	betC ←	choline‑sulfatase
RA	87,963	T→C	7.4%	Q452R (CAG→CGG)	betC ←	choline‑sulfatase
RA	90,803	C→G	5.9%	G88R (GGG→CGG)	PP_0080 ←	hypothetical protein
RA	100,112	C→A	10.2%	G99G (GGG→GGT) ‡	PP_0094 ←	5'‑nucleotidase
RA	100,113	C→A	11.3%	G99V (GGG→GTG) ‡	PP_0094 ←	5'‑nucleotidase
RA	100,116	T→G	8.7%	N98T (AAC→ACC) ‡	PP_0094 ←	5'‑nucleotidase
RA	100,117	T→G	8.9%	N98H (AAC→CAC) ‡	PP_0094 ←	5'‑nucleotidase
RA	103,818	A→T	12.7%	intergenic (+116/‑24)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	103,819	T→A	12.8%	intergenic (+117/‑23)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	103,820	T→A	11.8%	intergenic (+118/‑22)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	103,821	A→T	11.8%	intergenic (+119/‑21)	PP_0098 → / → PP_0099	hypothetical protein/hypothetical protein
RA	104,876	G→C	10.5%	P345P (CCG→CCC)	PP_0099 →	hypothetical protein
RA	151,912	G→A	9.5%	T65T (ACC→ACT)	PP_0143 ←	membrane protein
RA	156,383	C→T	10.1%	intergenic (‑8/+35)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	156,385	G→A	10.1%	intergenic (‑10/+33)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	156,386	T→C	10.1%	intergenic (‑11/+32)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	156,388	A→G	10.1%	intergenic (‑13/+30)	ygdQ ← / ← citN	transport protein/citrate transporter
RA	161,731	G→T	10.1%	intergenic (‑226/+20)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	161,732	A→T	9.3%	intergenic (‑227/+19)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	161,733	A→C	13.6%	intergenic (‑228/+18)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	162,270	C→T	7.8%	intergenic (‑304/+70)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	163,714	G→A	7.1%	G40G (GGC→GGT)	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,717	G→C	7.0%	A39A (GCC→GCG)	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,722	G→C	6.8%	R38G (CGC→GGC)	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	163,725	T→C	7.0%	T37A (ACC→GCC)	scpC ←	propionyl‑CoA:succinate CoA transferase
RA	169,976	C→A	7.0%	I126I (ATC→ATA)	PP_0159 →	family III CoA‑transferase
RA	182,034	G→A	11.6%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,035	A→T	11.0%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	11.0%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	188,320	G→A	7.3%	K143K (AAG→AAA)	PP_0165 →	GGDEF domain‑containing protein
RA	188,321	C→G	7.2%	L144V (CTT→GTT) ‡	PP_0165 →	GGDEF domain‑containing protein
RA	188,322	T→C	7.1%	L144P (CTT→CCT) ‡	PP_0165 →	GGDEF domain‑containing protein
RA	194,606	G→C	5.7%	E38Q (GAA→CAA) ‡	PP_0168 →	putative surface adhesion protein
RA	194,608	A→C	5.7%	E38D (GAA→GAC) ‡	PP_0168 →	putative surface adhesion protein
RA	194,609	G→T	5.8%	V39L (GTG→TTG) ‡	PP_0168 →	putative surface adhesion protein
RA	194,611	G→C	5.5%	V39V (GTG→GTC) ‡	PP_0168 →	putative surface adhesion protein
RA	195,559	C→A	28.7%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	16.7%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	17.0%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	37.0%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	5.4%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	16.8%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	20.3%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	21.7%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	21.6%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	16.0%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	29.6%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	6.6%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	12.1%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	10.2%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	13.9%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	18.2%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	19.2%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	200,329:1	+G	5.2%	coding (5835/26049 nt)	PP_0168 →	putative surface adhesion protein
RA	213,354	T→A	10.3%	L6287Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	232,405	T→C	5.5%	P168P (CCT→CCC)	PP_0180 →	cytochrome c family protein
RA	235,575	G→A	8.3%	R420R (CGC→CGT)	argH ←	argininosuccinate lyase
RA	236,407	C→T	7.8%	R143H (CGC→CAC)	argH ←	argininosuccinate lyase
RA	253,361	A→G	5.5%	intergenic (‑146/+25)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	268,746	G→C	7.1%	intergenic (‑77/+23)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	278,742:1	+A	92.5%	intergenic (‑237/+77)	PP_0224 ← / ← sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
RA	284,586	T→A	15.0%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,587	T→A	13.0%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	289,771	C→G	7.3%	A397G (GCC→GGC)	oprE →	outer‑membrane porin E
RA	307,865:1	+C	100%	intergenic (+880/‑989)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	322,133	G→A	19.3%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,140	T→C	17.4%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	334,939	C→T	7.5%	intergenic (‑254/+34)	PP_0276 ← / ← PP_t73	Cro/CI family transcriptional regulator/tRNA‑Thr
RA	336,124:1	+T	100%	coding (209/237 nt)	PP_0278 →	hypothetical protein
RA	337,809	A→G	25.0%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,816:1	+A	25.0%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819	A→C	24.7%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	C→G	25.1%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	G→T	27.7%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,827	Δ1 bp	26.3%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,836	C→T	29.4%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	343,607	T→A	7.4%	intergenic (‑163/‑77)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,608	G→C	7.1%	intergenic (‑164/‑76)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,609	T→A	7.2%	intergenic (‑165/‑75)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	344,041	Δ1 bp	13.1%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,045:1	+T	13.1%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	353,067	A→G	100%	intergenic (+34/+84)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	355,218	C→A	5.7%	intergenic (‑47/+38)	cbcW ← / ← cbcX	choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein
RA	355,219	A→C	5.7%	intergenic (‑48/+37)	cbcW ← / ← cbcX	choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein
RA	355,222	G→T	5.6%	intergenic (‑51/+34)	cbcW ← / ← cbcX	choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein
RA	355,223	T→G	5.6%	intergenic (‑52/+33)	cbcW ← / ← cbcX	choline/betaine/carnitine ABC transporter permease/choline/betaine/carnitine ABC transporter substrate‑binding protein
RA	356,599	G→A	7.8%	intergenic (‑396/‑57)	cbcX ← / → tdcG‑I	choline/betaine/carnitine ABC transporter substrate‑binding protein/L‑serine dehydratase
RA	369,640	T→C	8.6%	G240G (GGT→GGC)	PP_0308 →	dipeptidase
RA	390,088	G→T	7.2%	S121I (AGC→ATC)	soxA →	sarcosine oxidase subunit alpha
RA	427,742	G→C	6.2%	G19G (GGC→GGG)	PP_0350 ←	ferrichrome‑iron receptor
RA	427,753	G→T	5.9%	L16M (CTG→ATG)	PP_0350 ←	ferrichrome‑iron receptor
RA	428,854	Δ1 bp	6.0%	coding (153/957 nt)	PP_0351 ←	transmembrane sensor
RA	428,858:1	+C	6.2%	coding (149/957 nt)	PP_0351 ←	transmembrane sensor
RA	436,899	C→A	8.0%	W130L (TGG→TTG)	PP_0358 ←	membrane protein
RA	436,902	T→G	6.2%	Q129P (CAA→CCA)	PP_0358 ←	membrane protein
RA	445,095	T→C	19.3%	intergenic (+68/‑220)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,105	A→T	19.4%	intergenic (+78/‑210)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,107	T→G	15.4%	intergenic (+80/‑208)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,115	G→A	11.9%	intergenic (+88/‑200)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	468,461	C→T	10.9%	A832A (GCG→GCA)	PP_0386 ←	sensory box protein
RA	468,464	A→G	10.5%	C831C (TGT→TGC)	PP_0386 ←	sensory box protein
RA	474,144	G→C	6.3%	R281G (CGC→GGC)	dnaG ←	DNA primase
RA	474,146	A→T	6.2%	L280Q (CTG→CAG)	dnaG ←	DNA primase
RA	474,151	T→C	6.4%	Q278Q (CAA→CAG) ‡	dnaG ←	DNA primase
RA	474,152	T→A	6.4%	Q278L (CAA→CTA) ‡	dnaG ←	DNA primase
RA	474,155	T→A	6.4%	Q277L (CAG→CTG)	dnaG ←	DNA primase
RA	474,161	A→T	6.2%	L275Q (CTG→CAG)	dnaG ←	DNA primase
RA	494,525	C→A	5.6%	R96R (CGG→AGG)	djlA →	DnaJ‑like protein DjlA
RA	499,203	A→G	100%	intergenic (+47/‑249)	uhpA → / → PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
RA	502,121	A→T	7.2%	Y137F (TAT→TTT)	PP_0413 →	polyamine ABC transporter permease
RA	502,123	A→T	7.3%	K138* (AAA→TAA)	PP_0413 →	polyamine ABC transporter permease
RA	503,825	Δ1 bp	9.3%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,831	A→T	11.1%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,832	A→T	9.2%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,837:1	+C	8.2%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	532,676	G→T	5.4%	intergenic (+19/‑60)	PP_t03 → / → tufA	tRNA‑Thr/elongation factor Tu‑A
RA	532,677	A→T	5.5%	intergenic (+20/‑59)	PP_t03 → / → tufA	tRNA‑Thr/elongation factor Tu‑A
RA	532,944	A→T	6.8%	Y70F (TAC→TTC) ‡	tufA →	elongation factor Tu‑A
RA	532,945	C→G	7.2%	Y70* (TAC→TAG) ‡	tufA →	elongation factor Tu‑A
RA	532,946	A→T	7.5%	N71Y (AAC→TAC)	tufA →	elongation factor Tu‑A
RA	535,044	C→A	9.9%	intergenic (+29/‑91)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,046	T→A	12.0%	intergenic (+31/‑89)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,047	G→C	10.9%	intergenic (+32/‑88)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,048	T→A	10.9%	intergenic (+33/‑87)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	535,050	T→G	10.9%	intergenic (+35/‑85)	nusG → / → rplK	transcription antipausing factor NusG/50S ribosomal protein L11
RA	539,941	T→G	7.2%	R773R (CGT→CGG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	539,942	C→A	7.2%	P774T (CCG→ACG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	546,002	G→A	10.4%	intergenic (+42/‑31)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,007	G→T	13.0%	intergenic (+47/‑26)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,008	A→T	10.4%	intergenic (+48/‑25)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,009	A→C	10.0%	intergenic (+49/‑24)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,014	T→C	10.3%	intergenic (+54/‑19)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	556,149	C→T	8.7%	A29V (GCT→GTT)	rplX →	50S ribosomal protein L24
RA	583,719	C→G	7.2%	P529A (CCC→GCC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,720	C→G	7.2%	P529R (CCC→CGC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,721	C→G	7.2%	P529P (CCC→CCG) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	587,076	C→G	7.1%	P43R (CCG→CGG)	PP_0497 →	Cro/CI family transcriptional regulator
RA	607,608	T→G	5.3%	L171R (CTG→CGG)	ribA →	GTP cyclohydrolase II
RA	624,426	Δ1 bp	8.8%	coding (481/702 nt)	PP_0537 ←	transcriptional regulator
RA	624,430:1	+A	8.3%	coding (477/702 nt)	PP_0537 ←	transcriptional regulator
RA	635,840	G→T	10.2%	E22* (GAA→TAA) ‡	mpl →	UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase
RA	635,841	A→T	8.2%	E22V (GAA→GTA) ‡	mpl →	UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase
RA	635,842	A→C	8.2%	E22D (GAA→GAC) ‡	mpl →	UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase
RA	644,641:1	+G	7.8%	coding (376/978 nt)	acoA ←	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit alpha
RA	646,272	T→A	12.4%	intergenic (‑178/‑106)	PP_0556 ← / → acoR	acetoin catabolism protein/acetoin catabolism regulatory protein
RA	652,764	G→C	13.3%	intergenic (‑101/+17)	dsbD‑I ← / ← ctpL	thiol/disulfide interchange protein 1/methyl‑accepting chemotaxis protein CtpL
RA	652,767	G→C	13.5%	intergenic (‑104/+14)	dsbD‑I ← / ← ctpL	thiol/disulfide interchange protein 1/methyl‑accepting chemotaxis protein CtpL
RA	654,403	T→G	6.1%	K114Q (AAG→CAG)	ctpL ←	methyl‑accepting chemotaxis protein CtpL
RA	664,887	A→G	6.9%	S585G (AGC→GGC)	yfhM →	lipoprotein
RA	680,671	C→T	6.5%	P64L (CCG→CTG)	PP_0583 →	AraC family transcriptional regulator
RA	680,674	A→G	6.6%	Q65R (CAG→CGG)	PP_0583 →	AraC family transcriptional regulator
RA	691,951	G→A	6.8%	S137S (AGC→AGT)	yigZ ←	ribosome‑binding factor
RA	697,225	C→G	8.6%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	7.2%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,722	A→G	56.6%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,764	T→G	17.5%	intergenic (+12/‑120)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,765	A→T	16.9%	intergenic (+13/‑119)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,766	C→A	16.9%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	718,639	G→T	7.8%	F426L (TTC→TTA)	PP_0613 ←	amidase family protein
RA	743,432	A→C	5.5%	intergenic (+111/+163)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,439	T→G	6.8%	intergenic (+118/+156)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,440	T→A	6.7%	intergenic (+119/+155)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,441	C→A	6.9%	intergenic (+120/+154)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,448	G→T	6.7%	intergenic (+127/+147)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	772,178	T→C	6.2%	intergenic (+39/‑160)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,179	T→G	6.0%	intergenic (+40/‑159)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,182	C→A	6.2%	intergenic (+43/‑156)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,183	G→A	6.2%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	784,329	G→T	5.7%	R533S (CGC→AGC)	PP_0672 ←	sensory box protein
RA	793,656	T→C	9.1%	intergenic (‑21/‑203)	PP_0679 ← / → PP_0680	hypothetical protein/ATP‑dependent protease‑like protein
RA	793,657	C→G	9.1%	intergenic (‑22/‑202)	PP_0679 ← / → PP_0680	hypothetical protein/ATP‑dependent protease‑like protein
RA	793,658	G→A	9.2%	intergenic (‑23/‑201)	PP_0679 ← / → PP_0680	hypothetical protein/ATP‑dependent protease‑like protein
RA	802,770	T→C	9.8%	intergenic (+28/‑58)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,771	C→A	9.6%	intergenic (+29/‑57)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,772	T→G	9.7%	intergenic (+30/‑56)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	802,773	G→A	9.2%	intergenic (+31/‑55)	obg → / → proB	GTPase Obg/glutamate 5‑kinase
RA	806,078	T→G	6.3%	M418L (ATG→CTG)	PP_0693 ←	hypothetical protein
RA	806,084	G→C	5.4%	R416G (CGC→GGC)	PP_0693 ←	hypothetical protein
RA	806,091	G→C	5.7%	D413E (GAC→GAG) ‡	PP_0693 ←	hypothetical protein
RA	806,092	T→G	6.7%	D413A (GAC→GCC) ‡	PP_0693 ←	hypothetical protein
RA	813,203	C→A	5.7%	intergenic (+110/+21)	PP_0699 → / ← PP_t70	LysE family transporter/tRNA‑Met
RA	819,241:1	+C	14.5%	coding (395/627 nt)	PP_0705 →	DNA‑3‑methyladenine glycosylase
RA	819,246	Δ1 bp	14.8%	coding (400/627 nt)	PP_0705 →	DNA‑3‑methyladenine glycosylase
RA	830,862	A→C	6.8%	S46R (AGC→CGC)	PP_0715 →	outer membrane efflux protein
RA	830,865	G→C	7.1%	A47P (GCG→CCG) ‡	PP_0715 →	outer membrane efflux protein
RA	830,866	C→G	7.1%	A47G (GCG→GGG) ‡	PP_0715 →	outer membrane efflux protein
RA	830,867	G→C	7.1%	A47A (GCG→GCC) ‡	PP_0715 →	outer membrane efflux protein
RA	871,188	G→C	5.6%	intergenic (+36/+39)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	871,189	A→T	5.6%	intergenic (+37/+38)	PP_0753 → / ← PP_0754	lipoprotein/hypothetical protein
RA	895,198	G→C	7.3%	intergenic (+38/+26)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,207	G→C	8.2%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,210	G→C	10.9%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,216	G→A	11.2%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→C	8.2%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	896,592	G→C	6.2%	V8V (GTG→GTC)	PP_0779 →	methyl‑accepting chemotaxis transducer/sensory box protein
RA	901,418	G→A	9.2%	intergenic (‑137/‑194)	cysZ ← / → trxB	sulfate transport protein CysZ/thioredoxin reductase
RA	901,419	A→T	8.9%	intergenic (‑138/‑193)	cysZ ← / → trxB	sulfate transport protein CysZ/thioredoxin reductase
RA	901,420	T→C	8.9%	intergenic (‑139/‑192)	cysZ ← / → trxB	sulfate transport protein CysZ/thioredoxin reductase
RA	901,737	C→T	6.2%	G42G (GGC→GGT)	trxB →	thioredoxin reductase
RA	903,026	T→G	10.5%	N158T (AAC→ACC)	nadC ←	quinolinate phosphoribosyltransferase
RA	903,029	T→C	9.7%	D157G (GAC→GGC) ‡	nadC ←	quinolinate phosphoribosyltransferase
RA	903,030	C→G	9.8%	D157H (GAC→CAC) ‡	nadC ←	quinolinate phosphoribosyltransferase
RA	903,031	G→A	9.7%	C156C (TGC→TGT)	nadC ←	quinolinate phosphoribosyltransferase
RA	903,034	C→A	9.1%	G155G (GGG→GGT)	nadC ←	quinolinate phosphoribosyltransferase
RA	924,319	T→C	12.3%	T292A (ACG→GCG)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	924,320	C→G	10.0%	A291A (GCG→GCC)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	927,795	C→T	7.4%	V5943I (GTC→ATC)	PP_0806 ←	surface adhesion protein
RA	935,510	C→G	7.8%	G3371A (GGC→GCC) ‡	PP_0806 ←	surface adhesion protein
RA	935,511	C→G	7.2%	G3371R (GGC→CGC) ‡	PP_0806 ←	surface adhesion protein
RA	949,316	T→A	5.8%	F53Y (TTC→TAC)	dsbB →	disulfide bond formation protein B
RA	950,367	G→A	7.5%	G48D (GGC→GAC)	cyoA →	cytochrome bo terminal oxidase subunit II
RA	961,710	G→C	7.0%	H235Q (CAC→CAG)	selD ←	selenide, water dikinase
RA	963,453	G→A	6.7%	R21H (CGC→CAC)	phnC →	phosphonate ABC transporter ATP‑binding protein
RA	989,155	G→T	7.0%	C336F (TGC→TTC)	hisS →	histidine‑‑tRNA ligase
RA	989,160	T→A	6.9%	F338I (TTT→ATT) ‡	hisS →	histidine‑‑tRNA ligase
RA	989,161	T→A	7.0%	F338Y (TTT→TAT) ‡	hisS →	histidine‑‑tRNA ligase
RA	989,162	T→A	6.9%	F338L (TTT→TTA) ‡	hisS →	histidine‑‑tRNA ligase
RA	989,167	A→C	7.3%	E340A (GAA→GCA)	hisS →	histidine‑‑tRNA ligase
RA	994,947	T→A	14.2%	intergenic (+26/+99)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	994,948	T→A	15.8%	intergenic (+27/+98)	PP_0859 → / ← PP_0860	ketoglutaramate omega‑amidase/sulfite reductase flavoprotein subunit
RA	1,001,193	A→T	6.8%	Q57L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,010,849	G→C	6.4%	P72A (CCC→GCC)	PP_0871 ←	glycine betaine/carnitine/choline ABC transporter permease
RA	1,010,851	A→C	6.4%	I71S (ATC→AGC)	PP_0871 ←	glycine betaine/carnitine/choline ABC transporter permease
RA	1,010,854	C→G	6.2%	G70A (GGC→GCC)	PP_0871 ←	glycine betaine/carnitine/choline ABC transporter permease
RA	1,010,857	A→G	6.3%	V69A (GTG→GCG)	PP_0871 ←	glycine betaine/carnitine/choline ABC transporter permease
RA	1,010,861	C→G	6.2%	A68P (GCC→CCC)	PP_0871 ←	glycine betaine/carnitine/choline ABC transporter permease
RA	1,010,864	G→T	6.1%	L67M (CTG→ATG)	PP_0871 ←	glycine betaine/carnitine/choline ABC transporter permease
RA	1,013,192	T→A	11.3%	intergenic (+20/+111)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,194	T→A	13.9%	intergenic (+22/+109)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,023,925	C→A	6.3%	E408* (GAG→TAG)	opdP ←	glycine‑glutamate dipeptide porin
RA	1,023,926	A→T	6.8%	Y407* (TAT→TAA) ‡	opdP ←	glycine‑glutamate dipeptide porin
RA	1,023,927	T→G	6.8%	Y407S (TAT→TCT) ‡	opdP ←	glycine‑glutamate dipeptide porin
RA	1,033,599	T→A	8.5%	G73G (GGT→GGA)	PP_0891 →	hypothetical protein
RA	1,033,602	T→A	8.5%	I74I (ATT→ATA)	PP_0891 →	hypothetical protein
RA	1,035,781	T→C	7.1%	intergenic (+30/+1)	PP_0893 → / ← PP_0894	ThiJ/PfpI family protein/hypothetical protein
RA	1,035,783	C→G	6.9%	*133S (TGA→TCA)	PP_0894 ←	hypothetical protein
RA	1,070,246:1	+GA	100%	intergenic (+46/+96)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,260	G→C	27.1%	intergenic (+60/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,263	G→C	27.1%	intergenic (+63/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,086,865	G→A	7.0%	H62Y (CAT→TAT)	PP_0941 ←	ribosome associated protein
RA	1,092,896	T→G	6.2%	R268R (CGA→CGC)	PP_0949 ←	ATP‑binding protein
RA	1,113,802	G→T	7.4%	K93N (AAG→AAT)	hupN →	DNA‑binding protein HU
RA	1,113,805	A→C	7.0%	*94Y (TAA→TAC)	hupN →	DNA‑binding protein HU
RA	1,122,758	T→C	11.5%	intergenic (+29/+118)	PP_0983 → / ← PP_0984	membrane protein/membrane protein
RA	1,122,759	C→T	10.2%	intergenic (+30/+117)	PP_0983 → / ← PP_0984	membrane protein/membrane protein
RA	1,122,760	A→G	10.2%	intergenic (+31/+116)	PP_0983 → / ← PP_0984	membrane protein/membrane protein
RA	1,122,761	G→A	10.2%	intergenic (+32/+115)	PP_0983 → / ← PP_0984	membrane protein/membrane protein
RA	1,126,645:1	+C	100%	intergenic (‑99/+50)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,134,089	A→T	7.1%	intergenic (+34/+44)	PP_0995 → / ← gltS	membrane protein/glutamate:sodium symporter
RA	1,145,433	C→T	8.7%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,440	G→A	7.8%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,441	T→C	7.8%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,448	A→G	7.4%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,146,623	G→A	8.0%	G480G (GGC→GGT)	PP_1006 ←	heme receptor
RA	1,244,369	C→G	8.2%	G39A (GGT→GCT)	rnt ←	ribonuclease T
RA	1,245,697	A→G	9.3%	S18G (AGC→GGC)	PP_1087 →	OmpA family outer membrane protein
RA	1,245,701	T→G	9.4%	L19R (CTG→CGG)	PP_1087 →	OmpA family outer membrane protein
RA	1,245,704	C→A	9.0%	P20Q (CCG→CAG)	PP_1087 →	OmpA family outer membrane protein
RA	1,245,708	C→T	9.2%	A21A (GCC→GCT)	PP_1087 →	OmpA family outer membrane protein
RA	1,256,884	A→T	6.9%	noncoding (431/451 nt)	PP_mr14 ←	cspA regulatory region
RA	1,294,114	C→T	10.9%	intergenic (+15/+25)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,115	A→T	10.5%	intergenic (+16/+24)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,294,116	A→G	10.5%	intergenic (+17/+23)	pdxH → / ← PP_1130	pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein
RA	1,301,533	G→A	7.0%	A95T (GCT→ACT)	PP_1136 →	hypothetical protein
RA	1,312,287	C→T	9.3%	A790A (GCG→GCA) ‡	rapA ←	RNA polymerase‑associated protein RapA
RA	1,312,288	G→A	9.3%	A790V (GCG→GTG) ‡	rapA ←	RNA polymerase‑associated protein RapA
RA	1,316,485	G→A	9.3%	intergenic (+51/‑98)	PP_mr15 → / → PP_1150	P20 ncRNA/membrane protein
RA	1,327,121	C→T	46.4%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,356,405	G→C	6.2%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,362,770	C→A	6.5%	P387Q (CCG→CAG)	phoQ →	sensor protein
RA	1,385,147	G→A	13.7%	intergenic (‑117/+44)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,148	T→A	13.7%	intergenic (‑118/+43)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,149	G→T	13.7%	intergenic (‑119/+42)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,150	A→C	13.7%	intergenic (‑120/+41)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,151	T→A	13.7%	intergenic (‑121/+40)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,385,152	T→C	13.7%	intergenic (‑122/+39)	proS ← / ← oprD	proline‑‑tRNA ligase/basic amino acid specific porin OprD
RA	1,389,946	C→G	11.3%	A23G (GCC→GGC)	PP_1212 →	hypothetical protein
RA	1,389,951	C→G	11.4%	P25A (CCG→GCG)	PP_1212 →	hypothetical protein
RA	1,392,039	G→A	5.8%	intergenic (+70/‑45)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,041	C→G	5.4%	intergenic (+72/‑43)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,043	T→C	5.6%	intergenic (+74/‑41)	aspS → / → PP_1214	aspartate‑‑tRNA ligase/transcriptional regulator
RA	1,392,915	T→C	14.8%	intergenic (+85/‑101)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,917	A→G	15.4%	intergenic (+87/‑99)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,919	G→A	15.4%	intergenic (+89/‑97)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,921:1	+A	13.8%	intergenic (+91/‑95)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,927	C→G	12.5%	intergenic (+97/‑89)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,933	Δ1 bp	12.9%	intergenic (+103/‑83)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,936	T→C	13.4%	intergenic (+106/‑80)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,938	C→T	12.5%	intergenic (+108/‑78)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,940	G→A	12.5%	intergenic (+110/‑76)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,400,872	C→A	5.8%	intergenic (+35/‑134)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,874	A→T	5.5%	intergenic (+37/‑132)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,876	T→G	5.5%	intergenic (+39/‑130)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,411,292	G→A	6.5%	P215S (CCG→TCG)	PP_1232 ←	hypothetical protein
RA	1,419,548:1	+C	100%	intergenic (‑37/+99)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,424,251	A→C	10.9%	E321A (GAG→GCG) ‡	PP_5467 →	hypothetical protein
RA	1,424,252	G→C	11.1%	E321D (GAG→GAC) ‡	PP_5467 →	hypothetical protein
RA	1,424,253	G→T	10.5%	A322S (GCT→TCT)	PP_5467 →	hypothetical protein
RA	1,458,077	G→A	8.3%	V146I (GTC→ATC)	PP_1276 →	hypothetical protein
RA	1,474,995	T→G	8.1%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,474,996	C→A	7.7%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,493,662	A→T	7.3%	Y403* (TAT→TAA)	PP_1306 ←	Pyocin S‑type killer domain‑containing protein
RA	1,499,480	2 bp→AC	100%	intergenic (+57/‑106)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,498	1 bp→CG	100%	intergenic (+75/‑89)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,506:1	+C	100%	intergenic (+83/‑81)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,506,923	A→G	9.4%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,927	G→A	9.5%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,930	T→C	10.0%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,934	C→T	11.1%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,513,956	T→C	7.5%	L42P (CTG→CCG)	rsmH →	ribosomal RNA small subunit methyltransferase H
RA	1,521,246	T→G	9.0%	F168C (TTC→TGC) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,247	C→G	9.0%	F168L (TTC→TTG) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,248	C→A	9.0%	Q169K (CAG→AAG)	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,526,580	T→A	5.3%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,712	T→A	6.5%	L300Q (CTG→CAG)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,718	T→G	6.5%	F302C (TTC→TGC)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,725	A→C	10.4%	Q304H (CAA→CAC)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,727	T→A	10.5%	L305Q (CTG→CAG)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,729	G→T	10.5%	V306L (GTG→TTG)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,736	C→A	6.7%	A308E (GCA→GAA)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,738	A→G	6.6%	I309V (ATC→GTC)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,742	T→A	6.6%	L310Q (CTG→CAG)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,528,705	T→C	5.4%	V349A (GTA→GCA)	ftsA →	cell division protein FtsA
RA	1,551,282	G→T	8.8%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,285	A→C	8.6%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,555,364	G→A	7.0%	intergenic (+2/+72)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,388	A→C	7.6%	intergenic (+26/+48)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,389	T→A	7.7%	intergenic (+27/+47)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,390	G→T	7.7%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,565,158	G→A	6.1%	S57S (TCC→TCT)	pitB ←	phosphate transporter
RA	1,576,756	G→C	9.7%	intergenic (‑276/+37)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,576,757	A→T	10.0%	intergenic (‑277/+36)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,576,760	A→T	10.0%	intergenic (‑280/+33)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,588,062	T→C	8.9%	G158G (GGT→GGC)	PP_1392 →	NAD‑binding protein
RA	1,591,965	G→C	6.8%	intergenic (‑72/‑131)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,591,982	C→A	10.4%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,591,987	T→G	12.4%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,594,061	T→C	8.6%	intergenic (‑259/+42)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,594,066	G→T	7.6%	intergenic (‑264/+37)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,594,067	C→G	7.4%	intergenic (‑265/+36)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,594,068	A→C	7.5%	intergenic (‑266/+35)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,594,073	G→A	7.6%	intergenic (‑271/+30)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,596,373	A→T	7.3%	L213Q (CTG→CAG)	dctD‑III ←	C4‑dicarboxylate transport transcriptional regulator
RA	1,598,828	A→G	9.1%	intergenic (‑67/+64)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,831	C→G	8.9%	intergenic (‑70/+61)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,832	T→C	8.9%	intergenic (‑71/+60)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,833	G→A	8.9%	intergenic (‑72/+59)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,834	C→G	8.9%	intergenic (‑73/+58)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,598,837	C→T	8.9%	intergenic (‑76/+55)	dctB ← / ← bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
RA	1,609,146	C→T	6.2%	A373A (GCG→GCA)	PP_1411 ←	GGDEF domain‑containing protein
RA	1,619,627	A→G	8.1%	L203P (CTG→CCG)	opdH ←	tricarboxylate‑specific outer membrane porin
RA	1,622,188	G→A	12.0%	E368K (GAG→AAG) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,622,190	G→C	13.4%	E368D (GAG→GAC) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,622,192	T→C	11.1%	L369S (TTG→TCG)	PP_1421 →	sensor histidine kinase TctE
RA	1,631,093	T→C	6.5%	intergenic (+27/‑154)	PP_1430 → / → lepA	DegP‑like serine endoprotease/elongation factor 4
RA	1,631,094	T→G	6.6%	intergenic (+28/‑153)	PP_1430 → / → lepA	DegP‑like serine endoprotease/elongation factor 4
RA	1,631,095	C→A	6.7%	intergenic (+29/‑152)	PP_1430 → / → lepA	DegP‑like serine endoprotease/elongation factor 4
RA	1,632,093	C→T	8.3%	P283S (CCT→TCT) ‡	lepA →	elongation factor 4
RA	1,632,095	T→A	8.1%	P283P (CCT→CCA) ‡	lepA →	elongation factor 4
RA	1,632,097	A→G	8.3%	E284G (GAG→GGG)	lepA →	elongation factor 4
RA	1,642,271	G→C	8.8%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,278	C→G	8.5%	intergenic (‑106/+46)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,279	G→C	8.5%	intergenic (‑107/+45)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,285	G→C	8.5%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,292	T→C	6.9%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,643,943	G→C	6.5%	Q267E (CAA→GAA)	lon‑I ←	DNA‑binding ATP‑dependent protease
RA	1,643,949	T→C	6.2%	K265E (AAG→GAG)	lon‑I ←	DNA‑binding ATP‑dependent protease
RA	1,643,950	G→A	6.2%	L264L (CTC→CTT)	lon‑I ←	DNA‑binding ATP‑dependent protease
RA	1,643,956	G→C	6.2%	F262L (TTC→TTG)	lon‑I ←	DNA‑binding ATP‑dependent protease
RA	1,655,873	G→A	7.1%	T299I (ACC→ATC)	PP_1449 ←	hypothetical protein
RA	1,665,249	T→G	7.1%	I207L (ATC→CTC)	PP_1459 ←	CBS domain‑containing protein
RA	1,665,250	G→C	7.0%	R206R (CGC→CGG)	PP_1459 ←	CBS domain‑containing protein
RA	1,665,258	T→A	6.9%	I204F (ATC→TTC)	PP_1459 ←	CBS domain‑containing protein
RA	1,665,261	G→C	6.9%	P203A (CCG→GCG)	PP_1459 ←	CBS domain‑containing protein
RA	1,665,262	C→A	6.9%	E202D (GAG→GAT)	PP_1459 ←	CBS domain‑containing protein
RA	1,691,772	T→C	8.1%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,773	C→G	9.2%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,783	C→A	9.5%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,786	T→G	9.6%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,703,221	T→C	11.8%	intergenic (+70/‑97)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,248	A→G	16.3%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,250	G→C	17.3%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,252	C→T	16.0%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,279	G→A	12.0%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,284	A→G	11.6%	intergenic (+133/‑34)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,286	C→T	11.9%	intergenic (+135/‑32)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,707,246	A→G	8.3%	intergenic (+64/+78)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,708,163	G→C	7.5%	intergenic (‑48/+3)	PP_1502 ← / ← PP_1503	OmpA family protein/hypothetical protein
RA	1,714,464	C→A	6.0%	P103Q (CCG→CAG)	PP_1509 →	hypothetical protein
RA	1,716,051	C→T	6.5%	P56L (CCA→CTA)	PP_1511 →	hypothetical protein
RA	1,717,899	G→T	7.7%	V200L (GTG→TTG)	rsmJ →	ribosomal RNA small subunit methyltransferase J
RA	1,726,485	A→T	16.1%	L560Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,726,488	A→T	16.1%	L559Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,728,855	G→C	9.4%	A84A (GCC→GCG)	PP_1523 ←	hypothetical protein
RA	1,728,859	A→T	8.7%	F83Y (TTT→TAT) ‡	PP_1523 ←	hypothetical protein
RA	1,728,860	A→T	10.1%	F83I (TTT→ATT) ‡	PP_1523 ←	hypothetical protein
RA	1,728,864	G→C	7.9%	A81A (GCC→GCG)	PP_1523 ←	hypothetical protein
RA	1,728,868:1	+T	6.7%	coding (239/378 nt)	PP_1523 ←	hypothetical protein
RA	1,741,445	C→T	7.9%	V156V (GTG→GTA)	PP_1538 ←	hypothetical protein
RA	1,747,350:1	+G	11.8%	coding (159/219 nt)	PP_5473 ←	LuxR family transcriptional regulator
RA	1,747,351	T→A	19.5%	E53V (GAG→GTG)	PP_5473 ←	LuxR family transcriptional regulator
RA	1,747,355	G→C	12.5%	P52A (CCG→GCG)	PP_5473 ←	LuxR family transcriptional regulator
RA	1,747,863	C→T	9.2%	intergenic (‑355/+176)	PP_5473 ← / ← PP_5474	LuxR family transcriptional regulator/hypothetical protein
RA	1,771,175	T→A	7.0%	V641V (GTT→GTA)	PP_1579 →	hypothetical protein
RA	1,771,176	T→A	7.0%	Y642N (TAC→AAC)	PP_1579 →	hypothetical protein
RA	1,771,179	C→G	6.3%	P643A (CCT→GCT)	PP_1579 →	hypothetical protein
RA	1,797,344	G→C	9.0%	K15N (AAG→AAC)	lpxA →	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
RA	1,800,993	G→A	10.2%	R326H (CGC→CAC)	dnaEA →	DNA polymerase III subunit alpha
RA	1,810,335	T→G	12.4%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,336	C→A	11.6%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,819,789	Δ1 bp	10.8%	intergenic (+26/‑449)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,791	T→A	11.0%	intergenic (+28/‑447)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,795:1	+A	11.0%	intergenic (+32/‑443)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,819,796	T→C	11.0%	intergenic (+33/‑442)	rpoS → / → PP_1624	RNA polymerase sigma S factor/group II intron‑encoding maturase
RA	1,831,777	G→A	12.2%	R219Q (CGG→CAG)	yfiP →	hypothetical protein
RA	1,831,780	T→C	12.2%	L220P (CTG→CCG)	yfiP →	hypothetical protein
RA	1,831,789	A→C	9.3%	D223A (GAC→GCC)	yfiP →	hypothetical protein
RA	1,839,367	A→T	6.9%	L51Q (CTG→CAG)	yfgD ←	arsenate reductase
RA	1,839,371	T→C	6.9%	K50E (AAG→GAG)	yfgD ←	arsenate reductase
RA	1,839,373	C→G	7.1%	G49A (GGC→GCC)	yfgD ←	arsenate reductase
RA	1,839,379	A→T	7.0%	L47Q (CTG→CAG)	yfgD ←	arsenate reductase
RA	1,845,783	T→C	14.6%	L25P (CTC→CCC)	pfeS‑II →	histidine kinase
RA	1,845,787	T→G	15.0%	S26R (AGT→AGG)	pfeS‑II →	histidine kinase
RA	1,845,792	C→A	15.5%	T28N (ACC→AAC)	pfeS‑II →	histidine kinase
RA	1,845,796	G→A	14.3%	W29* (TGG→TGA)	pfeS‑II →	histidine kinase
RA	1,846,297	Δ1 bp	10.5%	coding (588/1377 nt)	pfeS‑II →	histidine kinase
RA	1,846,303:1	+A	9.8%	coding (594/1377 nt)	pfeS‑II →	histidine kinase
RA	1,848,876	C→T	6.5%	A106V (GCC→GTC)	cysM →	cysteine synthase B
RA	1,859,527	A→C	5.5%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,529	T→A	5.5%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,531	G→T	5.6%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,898,889	T→A	13.7%	noncoding (36/77 nt)	PP_t18 →	tRNA‑Asp
RA	1,903,968	T→G	6.5%	F75V (TTC→GTC)	nirB →	nitrite reductase large subunit
RA	1,915,826	A→T	7.2%	intergenic (+254/‑35)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,915,830	A→T	7.8%	intergenic (+258/‑31)	fklB‑II → / → PP_1715	FKBP‑type peptidyl‑prolyl cis‑trans isomerase/hypothetical protein
RA	1,921,549	T→A	21.4%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,550	T→A	24.7%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,928,936	G→A	7.2%	R386* (CGA→TGA)	PP_1728 ←	membrane protein
RA	1,932,638:1	+C	100%	intergenic (‑105/+45)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,975,986	T→A	6.0%	Y306* (TAT→TAA)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,987	C→T	6.2%	Q307* (CAG→TAG)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,976,195	T→G	5.3%	intergenic (+23/‑142)	pheA → / → PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,984,435	T→C	8.0%	V209A (GTG→GCG)	PP_1776 →	bifunctional mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,987,992	C→A	10.2%	R152R (CGC→CGA)	PP_1779 →	lipopolysaccharide ABC transporter ATP‑binding protein
RA	1,987,993	G→C	10.1%	V153L (GTC→CTC) ‡	PP_1779 →	lipopolysaccharide ABC transporter ATP‑binding protein
RA	1,987,994	T→G	10.0%	V153G (GTC→GGC) ‡	PP_1779 →	lipopolysaccharide ABC transporter ATP‑binding protein
RA	1,998,668	A→T	8.9%	M271K (ATG→AAG)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	1,998,680	A→T	8.3%	L267H (CTT→CAT)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,002,446	T→A	5.9%	V796D (GTC→GAC)	PP_1786 →	glycosyl transferase
RA	2,004,570	G→A	8.1%	intergenic (+60/+90)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,004,573	T→C	7.9%	intergenic (+63/+87)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,009,367	C→A	5.8%	Q689H (CAG→CAT)	PP_1792 ←	group 2 family glycosyl transferase
RA	2,011,276	A→T	8.5%	V53D (GTT→GAT)	PP_1792 ←	group 2 family glycosyl transferase
RA	2,051,065	T→A	9.9%	intergenic (‑63/+23)	PP_1825 ← / ← PP_1826	hypothetical protein/isochorismatase family hydrolase
RA	2,068,151	A→T	10.4%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,152	A→T	10.4%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,078,179	G→A	8.7%	G301G (GGG→GGA)	PP_1853 →	LysR family transcriptional regulator
RA	2,081,082	A→T	6.0%	*190Y (TAA→TAT)	efp →	elongation factor P
RA	2,082,279	A→T	8.8%	intergenic (‑58/+1)	ohrR ← / ← PP_1861	organic hydroperoxide resistance transcriptional regulator/LysR family transcriptional regulator
RA	2,082,281	T→A	8.1%	*318L (TAA→TTA)	PP_1861 ←	LysR family transcriptional regulator
RA	2,082,283	A→T	7.6%	D317E (GAT→GAA)	PP_1861 ←	LysR family transcriptional regulator
RA	2,101,386	G→C	7.7%	T135T (ACG→ACC)	msrC →	free methionine‑(R)‑sulfoxide reductase
RA	2,136,930:1	+C	5.7%	intergenic (‑180/‑211)	fadE ← / → gstB	medium‑long chain acyl‑CoA dehydrogenase/glutathione S‑transferase
RA	2,136,934	G→C	5.8%	intergenic (‑184/‑207)	fadE ← / → gstB	medium‑long chain acyl‑CoA dehydrogenase/glutathione S‑transferase
RA	2,136,937	G→C	6.2%	intergenic (‑187/‑204)	fadE ← / → gstB	medium‑long chain acyl‑CoA dehydrogenase/glutathione S‑transferase
RA	2,136,941	Δ1 bp	5.7%	intergenic (‑191/‑200)	fadE ← / → gstB	medium‑long chain acyl‑CoA dehydrogenase/glutathione S‑transferase
RA	2,140,016	T→C	9.1%	H36R (CAC→CGC)	PP_5481 ←	hypothetical protein
RA	2,146,710	A→T	8.0%	Q213H (CAA→CAT)	murB →	UDP‑N‑acetylenolpyruvoylglucosamine reductase
RA	2,194,323	C→T	5.8%	A448T (GCC→ACC)	PP_1940 ←	methyl‑accepting chemotaxis transducer
RA	2,237,678	C→G	7.9%	A302A (GCG→GCC) ‡	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,237,679	G→C	8.2%	A302G (GCG→GGG) ‡	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,237,680	C→G	9.8%	A302P (GCG→CCG) ‡	PP_1975 ←	EmrB/QacA family drug resistance transporter
RA	2,241,843	G→C	8.7%	noncoding (35/76 nt)	PP_t27 →	tRNA‑Ala
RA	2,282,770	T→G	39.8%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,774	G→C	36.6%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,775	G→C	36.5%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,779	C→A	40.7%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,296,432	G→T	5.3%	L19M (CTG→ATG)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,296,439	A→G	5.9%	R16R (CGT→CGC)	PP_2023 ←	glutathione S‑transferase family protein
RA	2,313,687	A→T	7.0%	I134N (ATT→AAT)	benE‑I ←	benzoate transport protein
RA	2,320,485	Δ1 bp	5.7%	coding (756/945 nt)	PP_2041 ←	LysR family transcriptional regulator
RA	2,320,489	G→C	5.8%	A251G (GCC→GGC)	PP_2041 ←	LysR family transcriptional regulator
RA	2,320,492:1	+C	5.9%	coding (749/945 nt)	PP_2041 ←	LysR family transcriptional regulator
RA	2,322,627	G→T	5.1%	T391T (ACG→ACT)	PP_2042 →	hypothetical protein
RA	2,324,331	C→T	7.6%	T340M (ACG→ATG)	PP_2043 →	hypothetical protein
RA	2,334,995	C→A	7.3%	E488* (GAA→TAA)	PP_2052 ←	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase
RA	2,336,497	C→T	7.8%	intergenic (‑41/+39)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,498	A→T	7.8%	intergenic (‑42/+38)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,499	A→G	7.9%	intergenic (‑43/+37)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,337,328	A→G	6.1%	L245P (CTG→CCG)	ybhD ←	DNA‑binding transcriptional regulator
RA	2,394,761	T→A	6.5%	D211V (GAT→GTT)	dacB ←	D‑alanyl‑D‑alanine carboxypeptidase
RA	2,398,162	G→T	7.4%	L499I (CTC→ATC)	PP_2100 ←	two‑component system sensor protein
RA	2,398,163	G→C	7.6%	I498M (ATC→ATG) ‡	PP_2100 ←	two‑component system sensor protein
RA	2,398,164	A→C	7.8%	I498S (ATC→AGC) ‡	PP_2100 ←	two‑component system sensor protein
RA	2,402,301:1	+A	5.4%	coding (66/330 nt)	PP_2103 ←	hypothetical protein
RA	2,402,308	A→T	5.6%	L20Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,402,311	A→T	5.5%	L19Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,402,317	Δ1 bp	5.2%	coding (50/330 nt)	PP_2103 ←	hypothetical protein
RA	2,421,568	G→A	6.8%	G127R (GGG→AGG) ‡	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,421,570	G→C	6.9%	G127G (GGG→GGC) ‡	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,421,572	T→C	6.7%	L128P (CTG→CCG)	moaB‑I →	molybdenum cofactor biosynthesis protein B
RA	2,423,086	T→G	7.1%	S364R (AGC→CGC)	PP_2124 ←	glycosyl transferase
RA	2,445,044	T→G	6.0%	E156D (GAA→GAC) ‡	lexA‑I ←	transcriptional repressor
RA	2,445,045	T→A	6.0%	E156V (GAA→GTA) ‡	lexA‑I ←	transcriptional repressor
RA	2,455,852	T→A	6.6%	R189R (CGT→CGA)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,455,856	T→A	5.5%	S191T (TCG→ACG)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,467,904	C→T	5.4%	P265L (CCG→CTG)	queF →	NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase
RA	2,467,909	A→G	5.4%	S267G (AGC→GGC)	queF →	NADPH‑dependent 7‑cyano‑7‑deazaguanine reductase
RA	2,471,391	A→T	7.1%	D319V (GAC→GTC)	PP_2165 →	two‑component system response regulator
RA	2,478,840	G→A	11.5%	intergenic (+93/+352)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,841	C→A	11.5%	intergenic (+94/+351)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,845	G→C	11.5%	intergenic (+98/+347)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,849	T→G	11.3%	intergenic (+102/+343)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,478,850	T→C	11.5%	intergenic (+103/+342)	PP_2172 → / ← PP_2173	hypothetical protein/AraC family transcriptional regulator
RA	2,482,504	T→A	6.8%	intergenic (‑129/‑49)	PP_2176 ← / → PP_2177	transcriptional regulator, LysR family/transcriptional regulator
RA	2,482,511	T→A	7.0%	intergenic (‑136/‑42)	PP_2176 ← / → PP_2177	transcriptional regulator, LysR family/transcriptional regulator
RA	2,486,181	C→G	8.0%	A258G (GCC→GGC)	spuC‑I →	polyamine:pyruvate transaminase
RA	2,488,197	G→C	5.4%	intergenic (+53/‑349)	PP_2182 → / → PP_2183	hypothetical protein/formate dehydrogenase subunit gamma
RA	2,488,203	G→A	5.3%	intergenic (+59/‑343)	PP_2182 → / → PP_2183	hypothetical protein/formate dehydrogenase subunit gamma
RA	2,488,204	T→G	5.4%	intergenic (+60/‑342)	PP_2182 → / → PP_2183	hypothetical protein/formate dehydrogenase subunit gamma
RA	2,488,206	T→C	5.4%	intergenic (+62/‑340)	PP_2182 → / → PP_2183	hypothetical protein/formate dehydrogenase subunit gamma
RA	2,488,212	G→C	7.6%	intergenic (+68/‑334)	PP_2182 → / → PP_2183	hypothetical protein/formate dehydrogenase subunit gamma
RA	2,495,409	A→G	10.7%	*206W (TGA→TGG)	PP_2188 →	tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE
RA	2,495,412	G→C	10.8%	intergenic (+3/+20)	PP_2188 → / ← PP_2189	tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE/hypothetical protein
RA	2,495,413	G→C	10.8%	intergenic (+4/+19)	PP_2188 → / ← PP_2189	tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE/hypothetical protein
RA	2,495,416	C→T	10.5%	intergenic (+7/+16)	PP_2188 → / ← PP_2189	tRNA 2‑methylthio‑N6‑isopentenyl adenosine(37) hydroxylase MiaE/hypothetical protein
RA	2,503,962	C→T	6.2%	A30V (GCC→GTC)	PP_2197 →	hypothetical protein
RA	2,508,437	G→A	5.9%	R84C (CGC→TGC)	PP_2202 ←	membrane protein
RA	2,524,526	C→G	9.8%	T416T (ACC→ACG)	PP_2213 →	acyl‑CoA synthetase
RA	2,524,529	A→G	7.6%	K417K (AAA→AAG)	PP_2213 →	acyl‑CoA synthetase
RA	2,524,532	C→T	7.2%	A418A (GCC→GCT)	PP_2213 →	acyl‑CoA synthetase
RA	2,524,535	C→G	7.2%	F419L (TTC→TTG)	PP_2213 →	acyl‑CoA synthetase
RA	2,526,411	A→C	9.3%	K219Q (AAG→CAG) ‡	PP_2215 →	acetyl‑CoA acetyltransferase
RA	2,526,412	A→T	8.1%	K219M (AAG→ATG) ‡	PP_2215 →	acetyl‑CoA acetyltransferase
RA	2,526,413	G→T	7.9%	K219N (AAG→AAT) ‡	PP_2215 →	acetyl‑CoA acetyltransferase
RA	2,568,693	T→A	8.6%	Q285H (CAA→CAT)	PP_2252 ←	hypothetical protein
RA	2,568,696	T→G	8.6%	E284D (GAA→GAC)	PP_2252 ←	hypothetical protein
RA	2,568,701	C→A	8.2%	V283F (GTC→TTC)	PP_2252 ←	hypothetical protein
RA	2,568,704	T→A	8.0%	M282L (ATG→TTG)	PP_2252 ←	hypothetical protein
RA	2,573,551	C→T	6.9%	L103F (CTC→TTC)	PP_2257 →	aerotaxis receptor
RA	2,573,556	A→G	6.9%	E104E (GAA→GAG)	PP_2257 →	aerotaxis receptor
RA	2,594,474	C→A	6.6%	F41L (TTC→TTA)	PP_2272 →	hypothetical protein
RA	2,619,266	A→G	7.8%	F16S (TTT→TCT)	PP_2292 ←	hypothetical protein
RA	2,641,799	A→C	6.9%	Q21P (CAG→CCG)	PP_2312 →	lytic transglycosylase family protein
RA	2,641,804	C→A	6.7%	R23S (CGC→AGC)	PP_2312 →	lytic transglycosylase family protein
RA	2,641,807	T→G	6.8%	S24A (TCG→GCG)	PP_2312 →	lytic transglycosylase family protein
RA	2,647,909	C→T	9.5%	A33T (GCC→ACC)	ybbA ←	ABC transporter ATP‑binding protein
RA	2,650,088	C→A	8.1%	intergenic (+27/+107)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,091	T→A	8.4%	intergenic (+30/+104)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,094	T→G	8.9%	intergenic (+33/+101)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,653,486	A→G	5.0%	A291A (GCA→GCG)	PP_2325 →	2‑dehydropantoate 2‑reductase
RA	2,657,803	A→C	7.0%	intergenic (‑192/+17)	pabB ← / ← PP_2330	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex/hypothetical protein
RA	2,657,804	A→T	6.8%	intergenic (‑193/+16)	pabB ← / ← PP_2330	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex/hypothetical protein
RA	2,657,805	G→T	7.8%	intergenic (‑194/+15)	pabB ← / ← PP_2330	aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex/hypothetical protein
RA	2,664,539	C→T	7.9%	F134F (TTC→TTT)	acnA‑II →	aconitate hydratase
RA	2,666,745	A→T	13.5%	intergenic (+19/‑47)	acnA‑II → / → prpF	aconitate hydratase/aconitate isomerase
RA	2,666,746	A→T	13.9%	intergenic (+20/‑46)	acnA‑II → / → prpF	aconitate hydratase/aconitate isomerase
RA	2,666,747	A→T	13.9%	intergenic (+21/‑45)	acnA‑II → / → prpF	aconitate hydratase/aconitate isomerase
RA	2,669,671	T→G	11.6%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,674	C→A	11.7%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,673,177	A→C	10.2%	D164A (GAT→GCT)	PP_2340 →	hypothetical protein
RA	2,673,182	A→C	8.3%	M166L (ATG→CTG) ‡	PP_2340 →	hypothetical protein
RA	2,673,183	T→A	8.3%	M166K (ATG→AAG) ‡	PP_2340 →	hypothetical protein
RA	2,673,184	G→T	8.6%	M166I (ATG→ATT) ‡	PP_2340 →	hypothetical protein
RA	2,673,189	G→T	7.3%	S168I (AGC→ATC)	PP_2340 →	hypothetical protein
RA	2,680,461	G→C	13.1%	A265G (GCC→GGC)	PP_2350 ←	LysR family transcriptional regulator
RA	2,680,466	T→C	13.0%	Q263Q (CAA→CAG) ‡	PP_2350 ←	LysR family transcriptional regulator
RA	2,680,467	T→A	12.8%	Q263L (CAA→CTA) ‡	PP_2350 ←	LysR family transcriptional regulator
RA	2,680,468	G→A	12.7%	Q263* (CAA→TAA) ‡	PP_2350 ←	LysR family transcriptional regulator
RA	2,680,473	G→C	12.0%	A261G (GCC→GGC)	PP_2350 ←	LysR family transcriptional regulator
RA	2,697,099	G→A	6.1%	intergenic (+28/+49)	PP_2363 → / ← PP_2364	hypothetical protein/hypothetical protein
RA	2,721,305	G→A	7.4%	intergenic (‑267/‑175)	PP_2381 ← / → PP_2382	hypothetical protein/putative transporter
RA	2,742,867	C→T	6.8%	A185V (GCG→GTG)	PP_2396 →	hypothetical protein
RA	2,749,873	T→A	6.1%	K206M (AAG→ATG)	PP_2406 ←	quinate/shikimate dehydrogenase
RA	2,782,481	A→C	7.0%	intergenic (‑116/+15)	iscS‑II ← / ← PP_2436	cysteine desulfurase/LysR family transcriptional regulator
RA	2,793,752	G→T	10.3%	intergenic (+61/+66)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,755	A→C	11.1%	intergenic (+64/+63)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,756	C→A	11.2%	intergenic (+65/+62)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,757	T→G	11.3%	intergenic (+66/+61)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,758	G→T	10.8%	intergenic (+67/+60)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,761	A→C	11.5%	intergenic (+70/+57)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,799,171	A→G	10.1%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,177	C→T	11.4%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,180	A→G	11.1%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,186	C→T	10.7%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,805,580	A→G	5.9%	T119A (ACG→GCG)	rbsK →	ribokinase
RA	2,810,100	G→T	12.2%	M169I (ATG→ATT)	thrS →	threonine‑‑tRNA ligase
RA	2,812,775	C→T	11.9%	intergenic (+69/‑41)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,778	C→G	11.8%	intergenic (+72/‑38)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,781	A→G	11.7%	intergenic (+75/‑35)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,820,597	C→T	9.6%	intergenic (+398/+114)	PP_2473 → / ← PP_2474	hypothetical protein/glutathione S‑transferase family protein
RA	2,820,598	G→C	9.6%	intergenic (+399/+113)	PP_2473 → / ← PP_2474	hypothetical protein/glutathione S‑transferase family protein
RA	2,820,599	A→G	9.8%	intergenic (+400/+112)	PP_2473 → / ← PP_2474	hypothetical protein/glutathione S‑transferase family protein
RA	2,886,149	A→T	7.8%	M282K (ATG→AAG) ‡	PP_5536 ←	conserved protein of unknown function with RHS repeat‑associated core domain
RA	2,886,150	T→A	7.8%	M282L (ATG→TTG) ‡	PP_5536 ←	conserved protein of unknown function with RHS repeat‑associated core domain
RA	2,897,380	G→A	6.8%	T233T (ACG→ACA)	PP_2551 →	LysR family transcriptional regulator
RA	2,917,188	T→A	6.1%	S2070T (TCG→ACG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,917,195	T→A	7.0%	V2072E (GTG→GAG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,921,460	G→A	100%	G3494R (GGG→AGG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,937,684	C→T	10.5%	intergenic (+41/+42)	PP_2569 → / ← PP_2570	MHS family metabolite MFS transporter/transposase
RA	2,937,768	A→T	33.3%	L429L (CTT→CTA)	PP_2570 ←	transposase
RA	2,958,799	G→C	19.5%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,800	T→C	16.2%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,803	G→C	14.3%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,806	G→A	14.9%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,807	G→C	14.6%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,816	G→A	8.3%	intergenic (+82/+60)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,993,895	C→T	7.5%	E173K (GAA→AAA)	PP_2617 ←	hypothetical protein
RA	3,005,561	C→T	11.1%	A714A (GCC→GCT)	PP_2627 →	membrane protein
RA	3,010,385	C→T	11.7%	intergenic (‑1291/‑377)	PP_2628 ← / → PP_2631	ABC transporter ATP‑binding protein/cellulose biosynthesis protein BcsF/YhjT
RA	3,036,267	C→T	24.4%	A48A (GCG→GCA)	PP_2648 ←	universal stress protein family protein
RA	3,041,186	G→A	7.2%	A269V (GCA→GTA)	PP_2653 ←	Cro/CI family transcriptional regulator
RA	3,046,441	G→C	8.2%	R43P (CGT→CCT)	pstB‑I →	phosphate ABC transporter ATP‑binding protein
RA	3,051,838	T→A	10.3%	Y180N (TAC→AAC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,839	A→G	10.2%	Y180C (TAC→TGC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,844	C→T	8.9%	L182L (CTG→TTG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,845	T→A	8.9%	L182Q (CTG→CAG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,053,218	G→A	17.5%	intergenic (+19/+27)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,220	T→C	15.3%	intergenic (+21/+25)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,221	G→A	18.1%	intergenic (+22/+24)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,053,223	T→C	18.9%	intergenic (+24/+22)	PP_2664 → / ← agmR	two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator
RA	3,068,537	G→A	7.9%	E526K (GAA→AAA) ‡	qedH‑II →	quinoprotein ethanol dehydrogenase
RA	3,068,539	A→T	7.0%	E526D (GAA→GAT) ‡	qedH‑II →	quinoprotein ethanol dehydrogenase
RA	3,068,541	T→C	7.5%	F527S (TTC→TCC)	qedH‑II →	quinoprotein ethanol dehydrogenase
RA	3,103,469	A→T	7.0%	K219M (AAG→ATG)	PP_2713 →	two‑component system response regulator
RA	3,103,473	A→T	6.9%	A220A (GCA→GCT)  M1M (ATG→TTG) †	PP_2713 → PP_2714 →	two‑component system response regulator sensor histidine kinase
RA	3,103,888	A→C	7.8%	E139A (GAA→GCA)	PP_2714 →	sensor histidine kinase
RA	3,121,364	T→A	7.8%	Q27L (CAG→CTG)	PP_2737 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,121,368	G→C	7.8%	H26D (CAC→GAC)	PP_2737 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,124,491	G→T	8.9%	N254K (AAC→AAA)	PP_2741 ←	membrane protein
RA	3,158,307	C→G	6.1%	P109R (CCT→CGT)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,162,524	T→C	7.9%	intergenic (+471/‑109)	PP_2776 → / → PP_2777	homocysteine S‑methyltransferase family protein/acyl carrier protein
RA	3,162,527	G→A	8.0%	intergenic (+474/‑106)	PP_2776 → / → PP_2777	homocysteine S‑methyltransferase family protein/acyl carrier protein
RA	3,168,629	C→A	8.3%	P175Q (CCG→CAG)	PP_2782 →	class III pyridoxalphosphate dependent aminotransferase
RA	3,171,771	G→A	7.7%	G15S (GGT→AGT) ‡	PP_2784 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,171,772	G→C	7.5%	G15A (GGT→GCT) ‡	PP_2784 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,171,773	T→C	7.4%	G15G (GGT→GGC) ‡	PP_2784 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	3,181,223	T→C	5.9%	H140H (CAT→CAC)	PP_2791 →	aminoglycoside phosphotransferase
RA	3,203,150	G→A	9.3%	intergenic (+373/‑100)	PP_2809 → / → PP_2810	membrane protein/hypothetical protein
RA	3,203,154	G→A	9.3%	intergenic (+377/‑96)	PP_2809 → / → PP_2810	membrane protein/hypothetical protein
RA	3,203,159	T→C	9.5%	intergenic (+382/‑91)	PP_2809 → / → PP_2810	membrane protein/hypothetical protein
RA	3,203,424	T→A	5.8%	S59T (TCT→ACT)	PP_2810 →	hypothetical protein
RA	3,203,427	A→G	5.6%	S60G (AGC→GGC)	PP_2810 →	hypothetical protein
RA	3,208,521	G→T	7.0%	V724F (GTC→TTC)	PP_2812 →	transporter
RA	3,223,113	C→T	7.1%	intergenic (‑420/+140)	PP_2823 ← / ← PP_2824	methyl‑accepting chemotaxis transducer/TetR family transcriptional regulator
RA	3,233,690	T→C	5.9%	V293A (GTG→GCG)	GbpR →	galactose‑binding protein regulator
RA	3,238,145	T→G	6.9%	L195R (CTG→CGG)	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,149	C→A	6.6%	S196S (TCC→TCA)	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,206	A→G	7.1%	P215P (CCA→CCG)	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,258,716	C→T	8.1%	intergenic (‑38/+24)	PP_2855 ← / ← PP_2856	hypothetical protein/hypothetical protein
RA	3,258,717	G→T	7.8%	intergenic (‑39/+23)	PP_2855 ← / ← PP_2856	hypothetical protein/hypothetical protein
RA	3,258,718	A→C	7.7%	intergenic (‑40/+22)	PP_2855 ← / ← PP_2856	hypothetical protein/hypothetical protein
RA	3,258,719	A→G	7.7%	intergenic (‑41/+21)	PP_2855 ← / ← PP_2856	hypothetical protein/hypothetical protein
RA	3,266,102	T→C	13.2%	intergenic (+19/+40)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,103	C→T	13.3%	intergenic (+20/+39)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,111	G→C	16.0%	intergenic (+28/+31)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,113	A→T	16.0%	intergenic (+30/+29)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,114	A→T	16.0%	intergenic (+31/+28)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,116	G→C	16.0%	intergenic (+33/+26)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,124	A→G	14.9%	intergenic (+41/+18)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,266,125	G→A	12.7%	intergenic (+42/+17)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,275,566	C→G	6.1%	intergenic (+48/‑91)	PP_2873 → / → PP_5540	hypothetical protein/hypothetical protein
RA	3,296,501	T→C	8.1%	Q125R (CAG→CGG) ‡	PP_2898 ←	hypothetical protein
RA	3,296,502	G→A	8.5%	Q125* (CAG→TAG) ‡	PP_2898 ←	hypothetical protein
RA	3,303,894	A→T	6.3%	D177V (GAC→GTC)	cysS →	cysteine‑‑tRNA ligase
RA	3,304,763	A→G	7.7%	intergenic (+16/+16)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,304,764	C→G	7.8%	intergenic (+17/+15)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,312,688	T→A	9.7%	intergenic (+29/‑133)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,321,315	C→G	7.4%	P85A (CCG→GCG)	PP_2921 →	hypothetical protein
RA	3,321,964	C→G	10.8%	P301R (CCG→CGG)	PP_2921 →	hypothetical protein
RA	3,339,216	C→T	9.7%	intergenic (‑218/+25)	PP_2935 ← / ← ybiT	membrane protein/ABC‑F family ATPase
RA	3,339,217	G→C	9.3%	intergenic (‑219/+24)	PP_2935 ← / ← ybiT	membrane protein/ABC‑F family ATPase
RA	3,339,218	A→G	9.7%	intergenic (‑220/+23)	PP_2935 ← / ← ybiT	membrane protein/ABC‑F family ATPase
RA	3,351,974	G→A	8.0%	R79H (CGC→CAC)	PP_2947 →	transcriptional regulator MvaT
RA	3,370,228	G→A	8.3%	intergenic (+148/+413)	tnpC → / ← PP_2968	TnpA repressor TnpC/high‑affinity nickel/cobalt transporter
RA	3,395,348	Δ1 bp	5.7%	coding (849/948 nt)	PP_2998 →	2‑dehydropantoate 2‑reductase
RA	3,395,358:1	+C	6.8%	coding (859/948 nt)	PP_2998 →	2‑dehydropantoate 2‑reductase
RA	3,402,506	G→C	5.1%	intergenic (+30/‑122)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,511	G→C	5.1%	intergenic (+35/‑117)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,402,512	A→G	5.2%	intergenic (+36/‑116)	PP_3010 → / → PP_3011	hypothetical protein/hypothetical protein
RA	3,411,656	A→T	7.0%	K57M (AAG→ATG) ‡	PP_5551 →	hypothetical protein
RA	3,411,657	G→T	6.9%	K57N (AAG→AAT) ‡	PP_5551 →	hypothetical protein
RA	3,411,659	T→A	6.9%	V58D (GTC→GAC)	PP_5551 →	hypothetical protein
RA	3,411,661	A→C	6.7%	N59H (AAT→CAT) ‡	PP_5551 →	hypothetical protein
RA	3,411,662	A→T	6.7%	N59I (AAT→ATT) ‡	PP_5551 →	hypothetical protein
RA	3,415,368	C→A	6.6%	G16V (GGC→GTC)	PP_3028 ←	hypothetical protein
RA	3,415,371	T→A	5.8%	D15V (GAC→GTC)	PP_3028 ←	hypothetical protein
RA	3,415,374	T→G	5.8%	D14A (GAC→GCC)	PP_3028 ←	hypothetical protein
RA	3,424,895	C→G	8.1%	intergenic (+483/‑29)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,435,820	C→T	7.1%	A244A (GCC→GCT)	gpJ →	baseplate/tail fiber protein
RA	3,436,195	T→A	7.5%	W44R (TGG→AGG)	gpI →	tail formation protein
RA	3,436,199	T→C	7.4%	L45P (CTG→CCG) ‡	gpI →	tail formation protein
RA	3,436,200	G→A	7.4%	L45L (CTG→CTA) ‡	gpI →	tail formation protein
RA	3,436,204	T→A	7.3%	W47R (TGG→AGG)	gpI →	tail formation protein
RA	3,436,210	Δ1 bp	6.3%	coding (145/813 nt)	gpI →	tail formation protein
RA	3,436,216	G→T	6.5%	V51F (GTC→TTC)	gpI →	tail formation protein
RA	3,443,569	G→T	13.3%	P776P (CCG→CCT)	PP_3062 →	tail length determination protein
RA	3,446,663	A→G	8.1%	intergenic (+13/‑24)	gpD → / → PP_3066	tail formation/lytic enzyme
RA	3,446,664	C→T	8.1%	intergenic (+14/‑23)	gpD → / → PP_3066	tail formation/lytic enzyme
RA	3,453,480	A→G	9.4%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,456,311	T→G	6.8%	E51A (GAG→GCG)	eco ←	ecotin
RA	3,475,323	G→A	7.8%	P464S (CCG→TCG)	PP_3087 ←	excinuclease ABC subunit A
RA	3,475,489	G→C	11.2%	H408Q (CAC→CAG) ‡	PP_3087 ←	excinuclease ABC subunit A
RA	3,475,491	G→T	14.7%	H408N (CAC→AAC) ‡	PP_3087 ←	excinuclease ABC subunit A
RA	3,475,492	C→G	13.0%	L407F (TTG→TTC) ‡	PP_3087 ←	excinuclease ABC subunit A
RA	3,475,493	A→C	12.9%	L407W (TTG→TGG) ‡	PP_3087 ←	excinuclease ABC subunit A
RA	3,475,495	G→C	17.0%	G406G (GGC→GGG)	PP_3087 ←	excinuclease ABC subunit A
RA	3,488,605	A→G	6.1%	L42P (CTG→CCG)	PP_3094 ←	hypothetical protein
RA	3,488,611	T→C	5.9%	D40G (GAC→GGC) ‡	PP_3094 ←	hypothetical protein
RA	3,488,612	C→T	8.7%	D40N (GAC→AAC) ‡	PP_3094 ←	hypothetical protein
RA	3,491,024	G→A	7.4%	R123C (CGC→TGC)	clpV ←	protein ClpV1
RA	3,491,089	T→A	7.7%	H101L (CAC→CTC)	clpV ←	protein ClpV1
RA	3,499,037	G→C	8.8%	intergenic (‑184/+1016)	PP_5563 ← / ← PP_5565	membrane protein/hypothetical protein
RA	3,499,038	G→C	8.4%	intergenic (‑185/+1015)	PP_5563 ← / ← PP_5565	membrane protein/hypothetical protein
RA	3,506,824	G→A	7.5%	A48T (GCT→ACT)	PP_3104 →	hypothetical protein
RA	3,528,569	T→A	7.3%	L129Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,529,780	T→C	10.4%	L533L (TTG→CTG)	dnaEB →	error‑prone DNA polymerase
RA	3,529,783	G→A	10.6%	G534S (GGC→AGC)	dnaEB →	error‑prone DNA polymerase
RA	3,545,276	C→A	8.3%	M53I (ATG→ATT)	PP_3130 ←	hypothetical protein
RA	3,568,127	G→C	6.2%	L228F (TTG→TTC)	PP_3150 →	hypothetical protein
RA	3,568,129	C→G	7.3%	T229S (ACT→AGT)	PP_3150 →	hypothetical protein
RA	3,568,131	G→C	6.4%	E230Q (GAA→CAA)	PP_3150 →	hypothetical protein
RA	3,579,638	A→T	17.3%	intergenic (+407/‑228)	PP_5589 → / → benR	rhs repeat‑associated core domain‑containing protein/BenABC operon transcriptional activator
RA	3,579,640	A→T	18.2%	intergenic (+409/‑226)	PP_5589 → / → benR	rhs repeat‑associated core domain‑containing protein/BenABC operon transcriptional activator
RA	3,579,642	A→T	18.2%	intergenic (+411/‑224)	PP_5589 → / → benR	rhs repeat‑associated core domain‑containing protein/BenABC operon transcriptional activator
RA	3,580,849	T→A	7.3%	intergenic (+27/‑56)	benR → / → PP_3160	BenABC operon transcriptional activator/hypothetical protein
RA	3,582,005	G→T	10.7%	E26* (GAG→TAG)	benA →	benzoate 1,2‑dioxygenase subunit alpha
RA	3,584,898	G→T	7.4%	intergenic (+45/‑90)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,584,899	A→C	7.0%	intergenic (+46/‑89)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,628,161	G→C	8.6%	intergenic (+90/‑50)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,659,906	C→G	9.2%	intergenic (‑41/+34)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,908	G→A	8.9%	intergenic (‑43/+32)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,909	T→C	8.9%	intergenic (‑44/+31)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,911	C→G	8.8%	intergenic (‑46/+29)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,667,783	C→T	7.2%	A302T (GCA→ACA)	PP_3231 ←	hypothetical protein
RA	3,674,821	A→G	11.1%	Q12R (CAG→CGG)	tnpT‑II →	cointegrate resolution protein T
RA	3,683,461	T→A	5.3%	F225I (TTC→ATC)	PP_3249 →	putative oxidoreductase
RA	3,683,465	A→T	5.8%	D226V (GAC→GTC)	PP_3249 →	putative oxidoreductase
RA	3,683,469	T→A	5.4%	D227E (GAT→GAA)	PP_3249 →	putative oxidoreductase
RA	3,716,768	T→A	6.3%	D344V (GAC→GTC)	paaH ←	3‑hydroxyacyl‑CoA dehydrogenase PaaC
RA	3,723,683	G→T	6.8%	intergenic (+13/+17)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,723,684	C→T	6.9%	intergenic (+14/+16)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,723,685	A→G	6.9%	intergenic (+15/+15)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,723,686	A→C	6.9%	intergenic (+16/+14)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,727,120:1	+T	9.5%	coding (333/645 nt)	PP_3292 →	membrane protein
RA	3,727,125	T→A	9.4%	L113Q (CTG→CAG)	PP_3292 →	membrane protein
RA	3,727,128	T→A	10.0%	L114Q (CTG→CAG)	PP_3292 →	membrane protein
RA	3,732,030	A→G	7.0%	L404S (TTG→TCG)	PP_3299 ←	lipoprotein
RA	3,756,127	A→T	5.9%	H523L (CAT→CTT)	PP_3319 →	GGDEF domain‑containing sensory box protein
RA	3,759,481	C→G	7.0%	I38M (ATC→ATG)	folEB →	GTP cyclohydrolase I
RA	3,778,689	A→T	7.1%	P581P (CCA→CCT)	PP_3340 →	TonB‑dependent receptor
RA	3,779,129	A→T	8.1%	S112T (TCT→ACT)	nikR ←	nickel‑responsive regulator
RA	3,779,130	C→T	8.4%	L111L (TTG→TTA) ‡	nikR ←	nickel‑responsive regulator
RA	3,779,131	A→G	8.3%	L111S (TTG→TCG) ‡	nikR ←	nickel‑responsive regulator
RA	3,779,132	A→T	8.1%	L111M (TTG→ATG) ‡	nikR ←	nickel‑responsive regulator
RA	3,787,400	Δ1 bp	50.8%	coding (1235/1392 nt)	PP_3350 ←	hypothetical protein
RA	3,808,058	C→T	9.9%	V547V (GTG→GTA)	PP_3365 ←	acetolactate synthase
RA	3,812,659	A→G	9.3%	D328G (GAC→GGC)	PP_3368 →	MFS transporter
RA	3,812,662	T→A	9.5%	I329N (ATT→AAT)	PP_3368 →	MFS transporter
RA	3,812,665	C→T	9.5%	A330V (GCC→GTC)	PP_3368 →	MFS transporter
RA	3,829,347	T→C	6.0%	Y81C (TAC→TGC)	PP_3382 ←	gluconate 2‑dehydrogenase cytochrome c subunit
RA	3,836,283	C→T	10.2%	G257G (GGC→GGT)	PP_3387 →	hypothetical protein
RA	3,845,583	G→A	7.5%	S17S (AGC→AGT)	PP_3394 ←	3‑hydroxy‑3‑methylglutaryl‑CoA lyase
RA	3,845,703:1	+G	100%	intergenic (‑70/+28)	PP_3394 ← / ← PP_3395	3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator
RA	3,848,779	G→T	10.6%	V182F (GTC→TTC) ‡	PP_3397 →	hypothetical protein
RA	3,848,781	C→G	9.8%	V182V (GTC→GTG) ‡	PP_3397 →	hypothetical protein
RA	3,848,783	A→C	11.9%	N183T (AAC→ACC)	PP_3397 →	hypothetical protein
RA	3,853,118	T→A	13.4%	I169N (ATT→AAT)	alkB →	alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase
RA	3,863,777	G→C	7.6%	P900P (CCG→CCC)	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,863,781	A→C	8.1%	M902L (ATG→CTG) ‡	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,863,782	T→A	7.1%	M902K (ATG→AAG) ‡	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,863,783	G→T	6.9%	M902I (ATG→ATT) ‡	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,863,787	G→C	7.1%	G904R (GGG→CGG)	PP_3413 →	two‑component system sensor histidine kinase/response regulator
RA	3,877,138	A→T	9.7%	Q76L (CAG→CTG)	PP_3425 →	RND family transporter MFP subunit
RA	3,877,141	T→G	12.9%	V77G (GTC→GGC)	PP_3425 →	RND family transporter MFP subunit
RA	3,877,149	A→G	13.3%	T80A (ACC→GCC) ‡	PP_3425 →	RND family transporter MFP subunit
RA	3,877,150	C→G	13.8%	T80S (ACC→AGC) ‡	PP_3425 →	RND family transporter MFP subunit
RA	3,877,151	C→T	12.5%	T80T (ACC→ACT) ‡	PP_3425 →	RND family transporter MFP subunit
RA	3,877,159	C→A	10.2%	A83D (GCC→GAC)	PP_3425 →	RND family transporter MFP subunit
RA	3,877,162	A→T	8.6%	Q84L (CAG→CTG)	PP_3425 →	RND family transporter MFP subunit
RA	3,884,024	A→G	6.6%	Q348R (CAA→CGA)	PP_3428 →	TPR repeat‑containing protein
RA	3,884,637	A→G	10.5%	Q174Q (CAA→CAG)	PP_3429 →	two component system response regulator/sensor histidine kinase
RA	3,904,244	Δ1 bp	7.5%	coding (499/1593 nt)	ilvA‑I ←	threonine deaminase
RA	3,904,248:1	+A	7.7%	coding (495/1593 nt)	ilvA‑I ←	threonine deaminase
RA	3,911,489	C→T	8.7%	R267C (CGC→TGC)	PP_3451 →	hypothetical protein
RA	3,928,420	C→T	8.3%	intergenic (+96/‑44)	peaE → / → PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
RA	3,951,159	T→C	100%	intergenic (‑123/+72)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,951,161	A→T	100%	intergenic (‑125/+70)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,971,753	C→T	7.8%	intergenic (+136/‑244)	PP_3501 → / → PP_3502	transposase/transposase
RA	3,987,760	A→C	5.9%	E93A (GAG→GCG)	oplA →	5‑oxoprolinase A
RA	3,987,763	G→T	6.4%	G94V (GGG→GTG)	oplA →	5‑oxoprolinase A
RA	3,988,605	A→G	7.3%	T375A (ACC→GCC)	oplA →	5‑oxoprolinase A
RA	4,038,399	C→G	5.4%	A66A (GCC→GCG)	PP_3559 →	glycine betaine ABC transporter permease
RA	4,042,321	C→A	9.4%	L137I (CTC→ATC) ‡	PP_3563 →	hypothetical protein
RA	4,042,322	T→G	9.2%	L137R (CTC→CGC) ‡	PP_3563 →	hypothetical protein
RA	4,045,934	C→A	8.0%	Q262H (CAG→CAT) ‡	PP_3567 ←	LysR family transcriptional regulator
RA	4,045,935	T→G	7.7%	Q262P (CAG→CCG) ‡	PP_3567 ←	LysR family transcriptional regulator
RA	4,049,907	A→G	25.0%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,910	C→G	23.4%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,913	C→T	20.6%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,050,010	C→A	9.1%	L15M (CTG→ATG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,050,011	T→G	9.1%	L15R (CTG→CGG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,068,691	T→G	8.2%	S125R (AGC→CGC)	mdtC ←	multidrug transporter membrane protein
RA	4,068,692	G→C	8.9%	R124R (CGC→CGG) ‡	mdtC ←	multidrug transporter membrane protein
RA	4,068,693	C→A	8.7%	R124L (CGC→CTC) ‡	mdtC ←	multidrug transporter membrane protein
RA	4,080,200	G→A	6.3%	H193Y (CAC→TAC)	amaC ←	D‑lysine aminotransferase
RA	4,080,920	A→T	9.5%	intergenic (‑144/+19)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,089,056	C→G	7.1%	A41A (GCC→GCG)	kdgD →	5‑dehydro‑4‑deoxyglucarate dehydratase
RA	4,089,059	C→G	7.2%	P42P (CCC→CCG)	kdgD →	5‑dehydro‑4‑deoxyglucarate dehydratase
RA	4,089,062	C→G	7.0%	Y43* (TAC→TAG)	kdgD →	5‑dehydro‑4‑deoxyglucarate dehydratase
RA	4,089,065	C→G	7.0%	G44G (GGC→GGG)	kdgD →	5‑dehydro‑4‑deoxyglucarate dehydratase
RA	4,090,056	C→G	9.5%	S36C (TCC→TGC) ‡	gudP →	glucarate transporter
RA	4,090,057	C→G	9.5%	S36S (TCC→TCG) ‡	gudP →	glucarate transporter
RA	4,091,449	A→C	5.8%	N20H (AAC→CAC)	garD →	galactarate dehydratase
RA	4,091,453	T→A	6.0%	V21D (GTC→GAC)	garD →	galactarate dehydratase
RA	4,091,457	G→T	5.9%	V22V (GTG→GTT)	garD →	galactarate dehydratase
RA	4,097,937	C→G	7.8%	T251T (ACG→ACC) ‡	qor‑II ←	quinone oxidoreductase
RA	4,097,938	G→T	7.3%	T251K (ACG→AAG) ‡	qor‑II ←	quinone oxidoreductase
RA	4,097,941	G→C	7.5%	A250G (GCC→GGC)	qor‑II ←	quinone oxidoreductase
RA	4,097,944	A→C	6.7%	V249G (GTT→GGT) ‡	qor‑II ←	quinone oxidoreductase
RA	4,097,945	C→G	6.8%	V249L (GTT→CTT) ‡	qor‑II ←	quinone oxidoreductase
RA	4,104,620	C→T	8.1%	R387C (CGC→TGC)	PP_3612 →	TonB‑dependent receptor
RA	4,126,201	G→A	8.0%	A387V (GCG→GTG)	opdT‑II ←	tyrosine‑specific outer membrane porin D
RA	4,133,977	T→A	15.5%	A351A (GCA→GCT) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,133,979	C→G	15.4%	A351P (GCA→CCA) ‡	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,133,981	T→A	15.2%	Q350L (CAG→CTG)	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,164,719	C→T	7.4%	intergenic (+69/+48)	PP_3665 → / ← PP_3666	AraC family transcriptional regulator/MHS family metabolite MFS transporter
RA	4,206,999	G→A	7.5%	I259I (ATC→ATT)	PP_3691 ←	DNA helicase‑related protein
RA	4,240,029	G→T	6.8%	Y87* (TAC→TAA) ‡	PP_3717 ←	LuxR family transcriptional regulator
RA	4,240,031	A→C	5.9%	Y87D (TAC→GAC) ‡	PP_3717 ←	LuxR family transcriptional regulator
RA	4,244,992	A→C	8.9%	I10S (ATC→AGC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,246,185	C→G	13.8%	M30I (ATG→ATC)	alr ←	alanine racemase
RA	4,246,188	C→G	10.2%	S29S (TCG→TCC)	alr ←	alanine racemase
RA	4,252,213	T→G	8.9%	intergenic (‑181/+59)	PP_3726 ← / ← rocE	enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE
RA	4,263,050	A→T	7.8%	L126Q (CTG→CAG)	PP_3735 ←	ABC transporter ATP‑binding protein
RA	4,263,056	T→A	6.8%	Q124L (CAG→CTG)	PP_3735 ←	ABC transporter ATP‑binding protein
RA	4,288,843	G→A	7.2%	P94S (CCG→TCG)	PP_3760 ←	methyltransferase
RA	4,293,967	C→G	6.9%	D13H (GAC→CAC)	PP_3763 ←	precorrin‑6A synthase
RA	4,301,415	G→A	9.7%	G194S (GGC→AGC)	PP_3774 →	hypothetical protein
RA	4,335,600	C→T	8.3%	D57N (GAC→AAC)	PP_3808 ←	antibiotic synthesis protein MbtH
RA	4,338,393	T→A	6.4%	intergenic (+13/+129)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,493	A→T	9.7%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,348,705	A→G	35.6%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,355,046	Δ1 bp	9.8%	coding (246/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,355,050:1	+C	9.4%	coding (250/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,357,496	G→C	7.2%	V289L (GTG→CTG) ‡	PP_3831 →	hypothetical protein
RA	4,357,497	T→A	7.1%	V289E (GTG→GAG) ‡	PP_3831 →	hypothetical protein
RA	4,357,498	G→C	7.3%	V289V (GTG→GTC) ‡	PP_3831 →	hypothetical protein
RA	4,360,284	Δ1 bp	10.6%	coding (838/1161 nt)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,289	G→C	9.6%	A278G (GCC→GGC)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,293:1	+G	10.1%	coding (829/1161 nt)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,762	G→A	8.7%	G120G (GGC→GGT) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,763	C→T	8.6%	G120D (GGC→GAC) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,766	A→T	8.4%	I119N (ATT→AAT)	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,769	A→G	8.4%	I118T (ATC→ACC) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,360,770	T→C	8.4%	I118V (ATC→GTC) ‡	PP_3835 ←	two‑component system sensor histidine kinase
RA	4,403,484	G→A	6.0%	R33C (CGC→TGC)	PP_3882 ←	terminase small subunit
RA	4,405,320	T→C	7.3%	M81V (ATG→GTG)	PP_3886 ←	hypothetical protein
RA	4,416,082	Δ1 bp	9.2%	intergenic (+24/+95)	PP_3901 → / ← PP_3902	hypothetical protein/hypothetical protein
RA	4,416,087:1	+G	6.2%	intergenic (+29/+90)	PP_3901 → / ← PP_3902	hypothetical protein/hypothetical protein
RA	4,425,139	G→C	10.9%	intergenic (‑197/‑603)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,141	G→C	11.1%	intergenic (‑199/‑601)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,143	G→C	10.7%	intergenic (‑201/‑599)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,430,084	T→G	8.4%	intergenic (+37/‑147)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,430,085	G→T	8.4%	intergenic (+38/‑146)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,430,086	A→C	8.5%	intergenic (+39/‑145)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,430,087	C→A	8.5%	intergenic (+40/‑144)	PP_3924 → / → PP_3925	hypothetical protein/hypothetical protein
RA	4,434,358	C→T	10.8%	R2C (CGT→TGT)	PP_3930 →	hypothetical protein
RA	4,450,129	C→G	9.7%	A68G (GCC→GGC)	nicA →	nicotinate dehydrogenase subunit A
RA	4,452,723	C→T	9.1%	A776V (GCA→GTA)	nicB →	nicotinate dehydrogenase subunit B
RA	4,458,747	A→T	7.2%	intergenic (+39/‑229)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,750	C→T	7.1%	intergenic (+42/‑226)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,751	A→G	7.1%	intergenic (+43/‑225)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,754	A→T	7.0%	intergenic (+46/‑222)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,474,259	A→G	8.0%	L426P (CTG→CCG)	PP_3964 ←	transposase
RA	4,496,032	G→T	7.5%	W114C (TGG→TGT)	PP_3987 →	site‑specific recombinase
RA	4,500,117	T→C	7.8%	R315R (AGA→AGG)	PP_3989 ←	DNA‑cytosine methyltransferase
RA	4,513,904	A→G	7.8%	V363A (GTC→GCC)	ftsK ←	DNA translocase FtsK
RA	4,517,188	C→A	6.6%	intergenic (+25/+61)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,517,189	A→C	6.3%	intergenic (+26/+60)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,517,190	G→C	6.3%	intergenic (+27/+59)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,517,191	G→T	6.3%	intergenic (+28/+58)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,517,192	T→G	6.0%	intergenic (+29/+57)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,520,440	T→C	7.8%	intergenic (+31/+41)	cspD → / ← icd	DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase
RA	4,520,444	C→T	9.6%	intergenic (+35/+37)	cspD → / ← icd	DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase
RA	4,520,454	A→T	7.9%	intergenic (+45/+27)	cspD → / ← icd	DNA replication inhibitor/NADP(+)‑specific isocitrate dehydrogenase
RA	4,541,779	T→G	8.3%	Y166D (TAC→GAC) ‡	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,780	A→T	8.3%	Y166F (TAC→TTC) ‡	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,541,781	C→A	8.3%	Y166* (TAC→TAA) ‡	nhaB →	Na(+)/H(+) antiporter NhaB
RA	4,557,034	A→C	7.9%	L148R (CTG→CGG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,037	G→T	6.7%	P147Q (CCG→CAG)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,557,042	C→A	6.7%	L145L (CTG→CTT)	gntZ ←	6‑phosphogluconate dehydrogenase
RA	4,567,880	A→G	5.7%	T517A (ACC→GCC)	treZ →	malto‑oligosyltrehalose trehalohydrolase
RA	4,584,214	T→G	8.5%	E457A (GAG→GCG)	glgE ←	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
RA	4,586,030	2 bp→TC	100%	intergenic (+113/+101)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,033:1	+G	100%	intergenic (+116/+99)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,056:1	+C	100%	intergenic (+139/+76)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,591,288	T→A	6.2%	I120N (ATC→AAC)	liuC →	methylglutaconyl‑CoA hydratase
RA	4,604,204	C→G	8.2%	P12A (CCG→GCG) ‡	PP_4076 →	hypothetical protein
RA	4,604,205	C→G	8.2%	P12R (CCG→CGG) ‡	PP_4076 →	hypothetical protein
RA	4,623,000	C→T	7.1%	intergenic (+1593/+2971)	PP_5654 → / ← PP_4091	phosphotriesterase/transposase
RA	4,666,312	G→C	7.4%	S26S (TCG→TCC)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,666,320	Δ1 bp	5.8%	coding (86/1854 nt)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,672,934	T→G	5.8%	Q25H (CAA→CAC)	PP_4136 ←	LuxR family transcriptional regulator
RA	4,675,334	A→G	13.3%	intergenic (+33/+71)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,675,335	T→G	13.4%	intergenic (+34/+70)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,675,336	T→C	13.3%	intergenic (+35/+69)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,675,337	G→A	12.9%	intergenic (+36/+68)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,675,342	T→C	13.3%	intergenic (+41/+63)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,675,343	G→A	13.3%	intergenic (+42/+62)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,675,344	C→A	13.4%	intergenic (+43/+61)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,675,345	C→T	13.3%	intergenic (+44/+60)	PP_4137 → / ← chrR	outer membrane siderophore receptor/chromate reductase
RA	4,681,789:1	+C	10.9%	coding (79/1431 nt)	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,681,795	T→A	10.2%	L29M (TTG→ATG) ‡	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,681,796	T→A	10.5%	L29* (TTG→TAG) ‡	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,681,810	A→G	9.8%	S34G (AGC→GGC)	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,682,181	G→A	29.3%	W157* (TGG→TGA)	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,690,931	C→T	6.6%	A22V (GCA→GTA)	PP_4151 →	excisionase domain‑containing protein
RA	4,705,915	G→A	7.4%	R193C (CGC→TGC)	PP_4162 ←	membrane protein
RA	4,707,463	G→A	8.5%	A267V (GCG→GTG)	PP_4164 ←	alpha/beta hydrolase
RA	4,728,508	G→C	7.0%	F54L (TTC→TTG)	sucD ←	succinyl‑CoA synthetase subunit alpha
RA	4,740,805	Δ1 bp	100%	intergenic (+42/+711)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,816	T→G	100%	intergenic (+53/+700)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,819	2 bp→CT	100%	intergenic (+56/+696)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,839	C→G	31.8%	intergenic (+76/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,841	T→A	31.8%	intergenic (+78/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,842	T→A	29.5%	intergenic (+79/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,844	C→G	32.0%	intergenic (+81/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,229	A→C	100%	intergenic (+466/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,231	C→G	100%	intergenic (+468/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,234	C→T	100%	intergenic (+471/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,236	2 bp→TG	100%	intergenic (+473/+279)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,239	A→G	100%	intergenic (+476/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,243	3 bp→TGC	100%	intergenic (+480/+271)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,255	C→T	100%	intergenic (+492/+261)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,257	A→C	100%	intergenic (+494/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,260	2 bp→GC	100%	intergenic (+497/+255)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,263	A→C	100%	intergenic (+500/+253)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,272	A→G	100%	intergenic (+509/+244)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	100%	intergenic (+511/+242)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	G→C	100%	intergenic (+513/+240)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,278	C→T	100%	intergenic (+515/+238)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283:1	+T	100%	intergenic (+520/+233)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,289	C→G	100%	intergenic (+526/+227)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,292	C→T	100%	intergenic (+529/+224)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,294	C→G	100%	intergenic (+531/+222)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,296	A→C	100%	intergenic (+533/+220)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298	C→T	100%	intergenic (+535/+218)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,745,138	A→T	14.8%	L13H (CTC→CAC)	PP_4199 ←	lipoprotein
RA	4,745,141	A→T	14.5%	V12E (GTG→GAG)	PP_4199 ←	lipoprotein
RA	4,748,484	T→G	6.4%	V63G (GTG→GGG)	PP_4203 →	ubiquinone oxidoreductase electron transfer flavoprotein
RA	4,748,486	T→C	6.5%	F64L (TTC→CTC)	PP_4203 →	ubiquinone oxidoreductase electron transfer flavoprotein
RA	4,758,136	G→C	8.9%	R470P (CGC→CCC)	ompQ →	outer membrane pyoverdine efflux protein
RA	4,758,141	G→C	10.9%	intergenic (+1/+20)	ompQ → / ← pvdP	outer membrane pyoverdine efflux protein/pyoverdine biosynthesis‑like protein
RA	4,769,914	A→G	5.6%	L3118S (TTG→TCG)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,779,407	C→A	8.3%	intergenic (‑141/+20)	pvdD ← / ← pvdJ	non‑ribosomal peptide synthetase/non‑ribosomal peptide synthetase
RA	4,779,409	T→G	8.5%	intergenic (‑143/+18)	pvdD ← / ← pvdJ	non‑ribosomal peptide synthetase/non‑ribosomal peptide synthetase
RA	4,782,036	G→C	7.4%	R1760G (CGC→GGC)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,796,604	A→G	10.8%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,612	C→T	13.7%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,614	G→C	15.3%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,617	G→C	13.4%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,619	A→G	13.3%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,627	C→T	11.4%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,733	C→G	5.4%	G417A (GGT→GCT)	PP_4224 ←	sensor histidine kinase
RA	4,807,246	T→C	7.1%	K216E (AAG→GAG)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,808,189	G→C	14.6%	intergenic (‑298/‑257)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,808,192	G→C	15.2%	intergenic (‑301/‑254)	PP_4234 ← / → dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
RA	4,812,183	C→T	7.6%	intergenic (+103/‑290)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,184	A→T	7.7%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,185	A→G	7.8%	intergenic (+105/‑288)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,824,151	A→G	6.9%	F2347L (TTC→CTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,054	C→A	7.8%	S1379I (AGT→ATT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,055	T→G	7.8%	S1379R (AGT→CGT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,832,043	C→A	8.7%	intergenic (+18/+134)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,046	C→G	11.2%	intergenic (+21/+131)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,054	A→T	10.3%	intergenic (+29/+123)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,057	T→A	11.2%	intergenic (+32/+120)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,060	A→T	10.4%	intergenic (+35/+117)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,832,068	C→G	7.8%	intergenic (+43/+109)	pvdS → / ← pvdY	alternative sigma factor/hydroxyproline acetylase
RA	4,837,288	C→A	9.8%	P432Q (CCA→CAA)	ccoN‑I →	cbb3‑type cytochrome c oxidase subunit 1
RA	4,842,896	Δ1 bp	29.7%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,904:1	+G	20.9%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,843,873	C→A	9.1%	L241M (CTG→ATG) ‡	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,843,875	G→C	9.3%	L241L (CTG→CTC) ‡	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,843,877	T→G	9.3%	I242S (ATC→AGC)	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,852,593	T→A	7.8%	intergenic (‑264/+33)	recR ← / ← ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
RA	4,852,594	T→C	7.8%	intergenic (‑265/+32)	recR ← / ← ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
RA	4,852,595	G→A	7.8%	intergenic (‑266/+31)	recR ← / ← ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
RA	4,852,596	T→A	7.9%	intergenic (‑267/+30)	recR ← / ← ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
RA	4,852,600	C→T	7.5%	intergenic (‑271/+26)	recR ← / ← ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
RA	4,860,809	G→T	6.0%	L81M (CTG→ATG)	ligA ←	DNA ligase
RA	4,860,817	A→C	6.2%	M78R (ATG→AGG)	ligA ←	DNA ligase
RA	4,896,377	C→T	9.5%	intergenic (+10/‑198)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,904,996	A→C	6.3%	intergenic (‑163/+72)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,904,997	A→T	6.5%	intergenic (‑164/+71)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,912,822	C→G	7.0%	G626A (GGC→GCC)	ccmF ←	holocytochrome c synthetase
RA	4,928,842	T→C	6.9%	K444E (AAG→GAG)	cheA ←	chemotaxis histidine kinase CheA
RA	4,929,812	C→T	8.7%	L120L (CTG→CTA) ‡	cheA ←	chemotaxis histidine kinase CheA
RA	4,929,813	A→G	8.7%	L120P (CTG→CCG) ‡	cheA ←	chemotaxis histidine kinase CheA
RA	4,949,808	A→G	7.5%	M179T (ATG→ACG)	fliM ←	flagellar biosynthesis switching/energizing protein
RA	4,958,594	T→G	6.5%	M36L (ATG→CTG)	fliG ←	flagellar motor switch protein
RA	4,958,602	A→G	6.4%	L33P (CTG→CCG)	fliG ←	flagellar motor switch protein
RA	4,960,966	A→T	6.5%	intergenic (‑148/+116)	fliE ← / ← atoC	flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
RA	4,960,967	G→C	7.2%	intergenic (‑149/+115)	fliE ← / ← atoC	flagellar hook‑basal body complex protein FliE/two‑component system DNA‑binding transcriptional activator AtoC
JC	4,969,525	Δ3 bp	8.8%	coding (716‑718/2064 nt)	fliC ←	flagellin
RA	4,970,597	G→C	10.5%	intergenic (‑355/+39)	fliC ← / ← PP_4379	flagellin/3‑oxoacyl‑ACP synthase
RA	4,970,603	T→C	11.1%	intergenic (‑361/+33)	fliC ← / ← PP_4379	flagellin/3‑oxoacyl‑ACP synthase
RA	4,970,604	G→C	11.3%	intergenic (‑362/+32)	fliC ← / ← PP_4379	flagellin/3‑oxoacyl‑ACP synthase
RA	4,970,605	G→A	11.3%	intergenic (‑363/+31)	fliC ← / ← PP_4379	flagellin/3‑oxoacyl‑ACP synthase
RA	4,970,611	G→C	11.0%	intergenic (‑369/+25)	fliC ← / ← PP_4379	flagellin/3‑oxoacyl‑ACP synthase
RA	4,980,354	T→G	6.2%	intergenic (‑145/+16)	flgF ← / ← PP_4387	flagellar basal‑body rod protein FlgF/hypothetical protein
JC	4,980,585	+GGC	100%	intergenic (‑24/+44)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,988,362	G→C	10.3%	intergenic (+32/+62)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,988,363	C→A	10.0%	intergenic (+33/+61)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,988,364	T→G	10.1%	intergenic (+34/+60)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	4,988,365	G→C	10.3%	intergenic (+35/+59)	ycgR → / ← PP_4398	flagellar brake protein YcgR/MFS transporter
RA	5,005,787	G→T	10.2%	V713V (GTG→GTT)	PP_4410 →	hypothetical protein
RA	5,010,532	G→T	5.3%	V14V (GTG→GTT)	PP_4415 →	hypothetical protein
RA	5,010,534	C→A	5.6%	A15E (GCG→GAG)	PP_4415 →	hypothetical protein
RA	5,010,539	A→C	5.4%	N17H (AAC→CAC)	PP_4415 →	hypothetical protein
RA	5,019,896	G→T	100%	A72A (GCC→GCA)	PP_4423 ←	hypothetical protein
RA	5,026,750	A→T	7.4%	T20T (ACA→ACT)	ocd →	ornithine cyclodeaminase
RA	5,026,752	A→T	7.4%	D21V (GAC→GTC)	ocd →	ornithine cyclodeaminase
RA	5,026,754	A→T	7.4%	S22C (AGT→TGT)	ocd →	ornithine cyclodeaminase
RA	5,039,652	G→T	7.0%	I284I (ATC→ATA) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,039,653	A→C	7.5%	I284S (ATC→AGC) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,059,500	Δ1 bp	8.1%	coding (1334/1581 nt)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,059,505	A→T	9.3%	N443K (AAT→AAA)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,059,508:1	+G	8.5%	coding (1326/1581 nt)	PP_4458 ←	opine ABC transporter substrate‑binding protein
RA	5,064,612	C→A	6.8%	G129C (GGT→TGT)	PP_4461 ←	MFS transporter
RA	5,064,613	T→G	5.8%	A128A (GCA→GCC)	PP_4461 ←	MFS transporter
RA	5,097,265	A→T	9.3%	intergenic (+256/+36)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,097,266	A→T	9.4%	intergenic (+257/+35)	PP_mr66 → / ← acsA‑I	P6/acetyl‑CoA synthetase
RA	5,101,324	G→A	7.8%	G101G (GGC→GGT)	phhR ←	sigma‑54 dependent transcriptional regulator
RA	5,105,065	A→T	7.6%	intergenic (+88/+26)	yhhS → / ← ydiJ	carbohydrate efflux transporter/putative oxidoreductase
RA	5,105,066	A→T	7.5%	intergenic (+89/+25)	yhhS → / ← ydiJ	carbohydrate efflux transporter/putative oxidoreductase
RA	5,118,197	A→G	12.5%	intergenic (+29/‑30)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,123,458	T→A	6.9%	D225V (GAC→GTC)	PP_4510 ←	hypothetical protein
RA	5,134,986	T→A	7.4%	intergenic (‑47/+18)	PP_4520 ← / ← PP_4521	hypothetical protein/aerotaxis receptor
RA	5,134,987	T→A	7.4%	intergenic (‑48/+17)	PP_4520 ← / ← PP_4521	hypothetical protein/aerotaxis receptor
RA	5,134,988	T→A	7.4%	intergenic (‑49/+16)	PP_4520 ← / ← PP_4521	hypothetical protein/aerotaxis receptor
RA	5,151,718	Δ1 bp	7.5%	coding (206/462 nt)	PP_5696 ←	hypothetical protein
RA	5,151,724:1	+C	7.6%	coding (200/462 nt)	PP_5696 ←	hypothetical protein
RA	5,171,207	T→A	7.8%	intergenic (+128/+55)	PP_4548 → / ← fadD‑I	oxidoreductase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,520	T→C	7.4%	H147R (CAC→CGC)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,244	T→C	8.9%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,247	G→C	11.2%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,248	G→C	13.0%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,251	G→A	9.8%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,182,072	A→C	7.3%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,846	T→G	8.2%	R112R (CGT→CGG)	PP_4562 →	hypothetical protein
RA	5,182,847	C→A	7.5%	P113T (CCG→ACG)	PP_4562 →	hypothetical protein
RA	5,182,854	G→T	8.3%	G115V (GGC→GTC)	PP_4562 →	hypothetical protein
RA	5,194,356	C→G	10.0%	P226R (CCC→CGC)	PP_4574 →	hypothetical protein
RA	5,194,358	G→T	9.8%	E227* (GAG→TAG) ‡	PP_4574 →	hypothetical protein
RA	5,194,359	A→C	9.8%	E227A (GAG→GCG) ‡	PP_4574 →	hypothetical protein
RA	5,194,361	C→G	10.0%	R228G (CGG→GGG)	PP_4574 →	hypothetical protein
RA	5,194,887	T→G	21.7%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,888	C→A	21.4%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,201,435	A→G	7.0%	L27P (CTC→CCC)	PP_4582 ←	membrane protein
RA	5,201,440	G→C	7.4%	F25L (TTC→TTG)	PP_4582 ←	membrane protein
RA	5,201,445	C→T	7.8%	G24S (GGC→AGC)	PP_4582 ←	membrane protein
RA	5,203,832	G→C	8.2%	intergenic (+96/‑364)	PP_4583 → / → yajD	putative Peptidase/endonuclease
RA	5,212,487	A→G	7.6%	intergenic (+51/+43)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,488	C→A	9.6%	intergenic (+52/+42)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,491	T→G	7.6%	intergenic (+55/+39)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,504	T→C	7.7%	intergenic (+68/+26)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,507	A→G	7.7%	intergenic (+71/+23)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,239,884	G→A	10.0%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,889	T→C	10.4%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,253,883	G→A	7.1%	R251C (CGC→TGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,887	G→C	6.9%	F249L (TTC→TTG)	PP_4630 ←	MerR family transcriptional regulator
RA	5,255,685	A→C	11.3%	D72A (GAC→GCC)	folM →	bifunctional dihydrofolate reductase/dihydromonapterin reductase
RA	5,263,966	A→G	8.6%	V94A (GTG→GCG)	zinU ←	P‑loop guanosine triphosphatase‑dependent zinc chaperone
RA	5,263,969	A→T	8.3%	L93Q (CTG→CAG)	zinU ←	P‑loop guanosine triphosphatase‑dependent zinc chaperone
RA	5,263,972	C→T	8.2%	R92H (CGC→CAC)	zinU ←	P‑loop guanosine triphosphatase‑dependent zinc chaperone
RA	5,289,588	G→C	8.4%	L246L (CTC→CTG) ‡	PP_4663 ←	transmembrane protein
RA	5,289,589	A→T	10.4%	L246H (CTC→CAC) ‡	PP_4663 ←	transmembrane protein
RA	5,289,590	G→C	11.0%	L246V (CTC→GTC) ‡	PP_4663 ←	transmembrane protein
RA	5,290,643	C→G	7.0%	Q81E (CAG→GAG)	PP_4664 →	LysR family transcriptional regulator
RA	5,305,657	A→G	10.0%	L532S (TTG→TCG)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,305,662	C→T	10.3%	L530L (CTG→CTA) ‡	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,305,663	A→G	10.3%	L530P (CTG→CCG) ‡	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,305,668	C→T	10.5%	A528A (GCG→GCA)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,315,223	G→A	56.3%	P237L (CCG→CTG)	PP_4677 ←	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	5,329,396	T→A	7.0%	L10Q (CTG→CAG)	PP_4690 →	Rieske 2Fe‑2S family protein
RA	5,340,602	T→C	5.7%	C151R (TGC→CGC) ‡	folK →	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
RA	5,340,604	C→G	5.9%	C151W (TGC→TGG) ‡	folK →	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
RA	5,340,605	C→G	5.8%	P152A (CCG→GCG)	folK →	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
RA	5,351,977	G→T	6.9%	intergenic (‑230/+34)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,351,980	A→C	6.7%	intergenic (‑233/+31)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,356,806	G→T	7.3%	T652N (ACC→AAC)	infB ←	translation initiation factor IF‑2
RA	5,356,810	T→C	7.4%	K651E (AAG→GAG)	infB ←	translation initiation factor IF‑2
RA	5,356,811	G→A	7.7%	L650L (CTC→CTT)	infB ←	translation initiation factor IF‑2
RA	5,356,815	A→C	7.4%	V649G (GTT→GGT)	infB ←	translation initiation factor IF‑2
RA	5,361,071	A→T	12.0%	intergenic (‑78/+23)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,361,072	A→T	12.5%	intergenic (‑79/+22)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,368,670	G→T	7.8%	R14S (CGC→AGC)	greA ←	transcription elongation factor GreA
RA	5,368,671	A→C	7.8%	A13A (GCT→GCG)	greA ←	transcription elongation factor GreA
RA	5,371,996	Δ1 bp	5.1%	intergenic (‑60/+37)	carB ← / ← carA	carbamoyl‑phosphate synthase large subunit/carbamoyl‑phosphate synthase small subunit
RA	5,376,913	C→G	34.1%	V218L (GTA→CTA)	dnaK ←	chaperone protein DnaK
RA	5,384,527	G→C	6.7%	G331R (GGC→CGC) ‡	lldP →	L‑lactate permease
RA	5,384,528	G→C	6.7%	G331A (GGC→GCC) ‡	lldP →	L‑lactate permease
RA	5,407,046	T→G	6.7%	N124T (AAC→ACC)	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,050	G→T	7.1%	R123S (CGC→AGC)	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,051	C→G	7.1%	L122L (CTG→CTC) ‡	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,052	A→C	6.8%	L122R (CTG→CGG) ‡	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,056	C→A	6.6%	V121L (GTG→TTG)	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,430,392	A→G	8.6%	intergenic (‑74/+87)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,434,737	A→G	5.8%	V176A (GTG→GCG)	hrpB ←	ATP‑dependent helicase HrpB
RA	5,470,290	Δ1 bp	7.1%	coding (1615/1890 nt)	mrdA‑II ←	transpeptidase
RA	5,470,291	C→A	7.1%	K538N (AAG→AAT)	mrdA‑II ←	transpeptidase
RA	5,479,926	G→C	5.9%	W150C (TGG→TGC)	prmA →	ribosomal protein L11 methyltransferase
RA	5,493,217	G→A	10.1%	R267C (CGC→TGC)	cobJ ←	precorrin‑3B C17‑methyltransferase
RA	5,515,106	T→C	6.6%	E307G (GAG→GGG) ‡	cbpA ←	curved DNA‑binding protein
RA	5,515,107	C→G	7.8%	E307Q (GAG→CAG) ‡	cbpA ←	curved DNA‑binding protein
RA	5,515,108	G→A	6.5%	S306S (TCC→TCT)	cbpA ←	curved DNA‑binding protein
RA	5,518,539	A→T	10.4%	A14A (GCT→GCA)	PP_4850 ←	membrane protein
RA	5,518,544	G→C	7.6%	P13A (CCC→GCC)	PP_4850 ←	membrane protein
RA	5,518,546	A→T	7.0%	I12N (ATT→AAT)	PP_4850 ←	membrane protein
RA	5,518,548	G→C	7.2%	G11G (GGC→GGG)	PP_4850 ←	membrane protein
RA	5,520,364	C→T	6.9%	A137V (GCC→GTC)	PP_4853 →	DMT superfamily permease
RA	5,529,189	A→C	6.4%	intergenic (‑403/+191)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,529,190	C→A	7.3%	intergenic (‑404/+190)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,529,194	G→C	6.0%	intergenic (‑408/+186)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,529,200	T→G	5.6%	intergenic (‑414/+180)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,529,201	A→T	5.5%	intergenic (‑415/+179)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,529,202	C→A	5.5%	intergenic (‑416/+178)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,529,212	T→G	5.3%	intergenic (‑426/+168)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,530,631	A→G	5.6%	L113P (CTG→CCG)	braF ←	ABC transporter ATP‑binding protein
RA	5,530,633	G→C	5.5%	G112G (GGC→GGG)	braF ←	ABC transporter ATP‑binding protein
RA	5,537,058	A→G	17.4%	intergenic (+35/+68)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,061	A→T	19.2%	intergenic (+38/+65)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,062	G→C	19.2%	intergenic (+39/+64)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,067	A→G	18.9%	intergenic (+44/+59)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,068	A→G	17.9%	intergenic (+45/+58)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,069	C→T	17.8%	intergenic (+46/+57)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,070	C→T	17.5%	intergenic (+47/+56)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,075	G→C	20.5%	intergenic (+52/+51)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,076	A→T	17.4%	intergenic (+53/+50)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,079	C→T	17.5%	intergenic (+56/+47)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,538,568	A→T	13.1%	intergenic (+58/+63)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,538,569	A→T	13.3%	intergenic (+59/+62)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,538,571	G→C	13.0%	intergenic (+61/+60)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,538,573	A→T	13.4%	intergenic (+63/+58)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,538,574	A→T	14.4%	intergenic (+64/+57)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,538,577	G→T	13.3%	intergenic (+67/+54)	PP_4871 → / ← PP_4872	lysine decarboxylase family protein/hypothetical protein
RA	5,550,661	T→A	10.1%	S301S (TCT→TCA)	PP_4881 →	iron ABC transporter substrate‑binding protein
RA	5,550,663	A→G	8.5%	D302G (GAC→GGC)	PP_4881 →	iron ABC transporter substrate‑binding protein
RA	5,550,672	T→A	7.8%	L305Q (CTG→CAG)	PP_4881 →	iron ABC transporter substrate‑binding protein
JC	5,555,608	+GCC	100%	intergenic (‑84/+87)	PP_4887 ← / ← PP_4888	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	5,565,760	T→C	9.8%	M576V (ATG→GTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,590,067	C→A	5.9%	A219A (GCG→GCT)	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,590,528	C→G	6.8%	V66L (GTG→CTG)	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,590,529	G→C	6.9%	S65R (AGC→AGG) ‡	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,590,530	C→G	6.9%	S65T (AGC→ACC) ‡	pde ←	3',5'‑cyclic‑nucleotide phosphodiesterase
RA	5,608,994	G→C	7.1%	R202G (CGC→GGC)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,608,997	C→G	7.1%	E201Q (GAG→CAG)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,609,000	G→C	7.1%	P200A (CCT→GCT)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,626,459	C→G	6.6%	G348A (GGG→GCG)	PP_4944 ←	carbamoyltransferase
RA	5,628,603	A→G	7.7%	intergenic (‑73/+34)	rlmJ ← / ← putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
RA	5,628,609	A→T	7.7%	intergenic (‑79/+28)	rlmJ ← / ← putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
RA	5,628,610	A→T	7.7%	intergenic (‑80/+27)	rlmJ ← / ← putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
RA	5,628,611	A→T	7.7%	intergenic (‑81/+26)	rlmJ ← / ← putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
RA	5,628,614	A→G	7.7%	intergenic (‑84/+23)	rlmJ ← / ← putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
RA	5,628,617	C→T	8.1%	intergenic (‑87/+20)	rlmJ ← / ← putP	23S rRNA (adenine(2030)‑N(6))‑methyltransferase/sodium/L‑proline transporter
RA	5,641,455	C→G	9.8%	S373C (TCC→TGC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,641,460	C→G	11.1%	Q375E (CAG→GAG)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,645,759	G→A	6.3%	S371N (AGC→AAC)	PP_4954 →	membrane protein
RA	5,651,374	T→G	7.3%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,377	C→A	7.1%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,655,626:1	+A	15.0%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,631	T→G	16.8%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,636	C→A	22.3%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,641	Δ1 bp	16.7%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,658,669	A→G	6.0%	S242G (AGC→GGC)	sahR →	methionine metabolism transcriptional regulator
RA	5,659,684	T→A	7.3%	L243Q (CTG→CAG)	metK →	methionine adenosyltransferase
RA	5,659,686	A→T	7.3%	T244S (ACT→TCT) ‡	metK →	methionine adenosyltransferase
RA	5,659,688	T→A	7.2%	T244T (ACT→ACA) ‡	metK →	methionine adenosyltransferase
RA	5,667,937	C→T	7.4%	noncoding (70/97 nt)	PP_mr59 →	SAH_riboswitch regulatory region
RA	5,670,453	G→A	7.2%	intergenic (+42/‑43)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,457	A→T	6.7%	intergenic (+46/‑39)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,458	T→A	5.8%	intergenic (+47/‑38)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,459	A→T	5.4%	intergenic (+48/‑37)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,463	T→C	5.9%	intergenic (+52/‑33)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,672,372	G→C	6.9%	G208R (GGC→CGC)	PP_4979 →	substrate‑binding protein
RA	5,674,750:1	+G	100%	intergenic (+112/+28)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,674,753	G→C	100%	intergenic (+115/+25)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
JC	5,681,415	+CGGG	100%	intergenic (‑133/+71)	PP_4986 ← / ← PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
RA	5,687,579	C→A	10.1%	V463L (GTG→TTG)	pilJ ←	twitching motility protein PilJ
RA	5,687,580	C→G	10.0%	K462N (AAG→AAC) ‡	pilJ ←	twitching motility protein PilJ
RA	5,687,581	T→G	9.6%	K462T (AAG→ACG) ‡	pilJ ←	twitching motility protein PilJ
RA	5,725,838	G→A	7.7%	T376T (ACC→ACT)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,726,804:1	+G	12.3%	coding (162/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,726,809	Δ1 bp	11.9%	coding (157/2574 nt)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,728,793	T→C	6.5%	intergenic (‑156/+168)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,737,599	G→C	8.5%	intergenic (‑154/+48)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,737,602	G→C	8.5%	intergenic (‑157/+45)	hutU ← / ← PP_5034	urocanate hydratase/hypothetical protein
RA	5,740,467	T→G	32.0%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,470	A→T	15.2%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,471	A→T	15.9%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,474	C→A	16.8%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,484	T→C	11.3%	intergenic (+49/+22)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,749,603	A→G	6.9%	V126A (GTG→GCG)	typA ←	ribosome associated GTPase
RA	5,753,485	T→G	5.6%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,753,486	C→A	5.6%	intergenic (+47/‑319)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,754,243	C→G	62.3%	P147A (CCC→GCC)	glnL →	two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,790,014	T→C	8.3%	W391R (TGG→CGG)	ynfM →	efflux transporter
RA	5,791,127	G→A	8.4%	I197I (ATC→ATT) ‡	hemE ←	uroporphyrinogen decarboxylase
RA	5,791,128	A→T	8.2%	I197N (ATC→AAC) ‡	hemE ←	uroporphyrinogen decarboxylase
RA	5,791,129	T→C	8.2%	I197V (ATC→GTC) ‡	hemE ←	uroporphyrinogen decarboxylase
RA	5,798,193	C→T	8.4%	intergenic (‑294/+80)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,198	T→C	8.7%	intergenic (‑299/+75)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,201	G→A	8.5%	intergenic (‑302/+72)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,798,206	A→G	7.7%	intergenic (‑307/+67)	gltB ← / ← PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
RA	5,807,984	A→G	8.2%	intergenic (+119/+36)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,985	T→C	7.9%	intergenic (+120/+35)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,986	G→A	7.9%	intergenic (+121/+34)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,807,987	C→T	7.8%	intergenic (+122/+33)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,813,216	A→T	6.9%	N46I (AAC→ATC)	argS →	arginine‑‑tRNA ligase
RA	5,813,220	C→G	6.8%	I47M (ATC→ATG)	argS →	arginine‑‑tRNA ligase
RA	5,813,223	C→G	7.0%	A48A (GCC→GCG)	argS →	arginine‑‑tRNA ligase
RA	5,813,227	A→T	6.7%	M50L (ATG→TTG)	argS →	arginine‑‑tRNA ligase
RA	5,821,897	T→A	6.8%	L173Q (CTG→CAG)	metW →	methionine biosynthesis protein MetW
RA	5,839,099	G→A	7.5%	A157T (GCC→ACC)	yheT →	putative hydrolase
RA	5,856,454	T→C	6.6%	G127G (GGT→GGC)	PP_5133 →	membrane protein
RA	5,866,696	G→T	7.0%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,869,613	G→C	5.1%	G41R (GGG→CGG)	PP_5144 →	hypothetical protein
RA	5,891,909	G→A	8.1%	H239Y (CAT→TAT)	PP_5166 ←	sigma‑54 dependent transcriptional regulator
RA	5,897,778	C→G	10.4%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,783	C→G	10.3%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,902,732	T→A	6.3%	K102M (AAG→ATG) ‡	PP_5175 ←	HlyD family secretion protein
RA	5,902,733	T→A	6.4%	K102* (AAG→TAG) ‡	PP_5175 ←	HlyD family secretion protein
RA	5,917,643	A→T	6.4%	Q234L (CAG→CTG)	ygiF →	thiamine triphosphatase
RA	5,917,649	T→C	7.1%	L236P (CTG→CCG) ‡	ygiF →	thiamine triphosphatase
RA	5,917,650	G→C	7.7%	L236L (CTG→CTC) ‡	ygiF →	thiamine triphosphatase
RA	5,917,651	G→A	7.2%	G237S (GGC→AGC)	ygiF →	thiamine triphosphatase
RA	5,920,566	G→C	8.5%	V384V (GTG→GTC)	PP_5190 →	type II secretion system protein
RA	5,922,743	G→A	9.3%	A563V (GCG→GTG)	gcvP‑II ←	glycine dehydrogenase
RA	5,948,251	C→T	44.5%	G75S (GGC→AGC)	rho ←	transcription termination factor Rho
RA	5,950,984	C→A	6.1%	R658L (CGT→CTT)	ppk ←	polyphosphate kinase
RA	5,952,898	A→G	8.3%	V20A (GTC→GCC)	ppk ←	polyphosphate kinase
RA	5,955,621	C→T	8.1%	G171G (GGC→GGT)	elbB →	putative hydrolase
RA	5,956,336	A→G	7.4%	V44A (GTG→GCG)	PP_5221 ←	hypothetical protein
RA	5,958,364	A→G	6.2%	M590V (ATG→GTG)	cyaA →	adenylate cyclase
RA	5,959,995	A→T	8.7%	noncoding (74/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,959,996	A→T	8.7%	noncoding (73/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,962,152	A→G	6.4%	K350E (AAG→GAG)	lysA‑II →	diaminopimelate decarboxylase
RA	5,980,179	A→G	5.7%	Q275R (CAG→CGG) ‡	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,980,180	G→C	5.6%	Q275H (CAG→CAC) ‡	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,984,832	G→A	89.0%	D96D (GAC→GAT)	ycaC‑II ←	putative hydrolase
RA	5,984,835	T→C	88.7%	E95E (GAA→GAG)	ycaC‑II ←	putative hydrolase
RA	5,984,862	G→A	94.7%	P86P (CCC→CCT)	ycaC‑II ←	putative hydrolase
RA	5,984,865	A→G	94.8%	R85R (CGT→CGC)	ycaC‑II ←	putative hydrolase
RA	5,990,441	3 bp→TCT	100%	coding (224‑226/630 nt)	ycaC‑III ←	putative hydrolase
RA	5,990,451	T→C	100%	E72E (GAA→GAG)	ycaC‑III ←	putative hydrolase
RA	5,990,454	C→G	100%	P71P (CCG→CCC)	ycaC‑III ←	putative hydrolase
RA	5,990,469	G→A	94.7%	N66N (AAC→AAT)	ycaC‑III ←	putative hydrolase
RA	5,990,472	G→C	94.2%	P65P (CCC→CCG)	ycaC‑III ←	putative hydrolase
RA	5,994,456	A→G	8.5%	T395A (ACC→GCC)	PP_5251 →	transporter
RA	5,997,189:1	+G	11.6%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,194	Δ1 bp	11.1%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,004,987	T→G	7.2%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,004,994	G→C	13.9%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,004,997	A→T	15.2%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,000	G→C	19.5%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,007	C→A	13.3%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,013,846	T→G	14.8%	intergenic (+51/+59)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,885	T→C	100%	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,016,729	C→A	6.7%	intergenic (‑45/+182)	PP_5728 ← / ← PP_5267	rhs repeat‑associated core domain‑containing protein/cytochrome c5
RA	6,023,159	G→A	6.8%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,160	T→C	6.9%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,042,886	A→C	6.6%	M275L (ATG→CTG)	PP_5295 →	hypothetical protein
RA	6,046,064	T→C	7.8%	Q16R (CAG→CGG)	PP_5298 ←	glutamine amidotransferase
RA	6,048,910	C→G	7.1%	T32S (ACC→AGC)	rpoZ →	DNA‑directed RNA polymerase subunit omega
RA	6,060,485	T→G	7.6%	intergenic (+121/+60)	PP_5311 → / ← PP_5312	signal transduction protein/hypothetical protein
RA	6,060,489	T→C	6.5%	intergenic (+125/+56)	PP_5311 → / ← PP_5312	signal transduction protein/hypothetical protein
RA	6,071,883	C→G	6.2%	L214F (TTG→TTC)	pstB‑II ←	phosphate ABC transporter ATP‑binding protein
RA	6,080,988	T→A	6.5%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,080,989	T→A	6.5%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,087,353	G→T	7.5%	R292L (CGG→CTG)	oruR →	ornithine utilization transcriptional regulator
RA	6,087,357	T→A	7.4%	H293Q (CAT→CAA)	oruR →	ornithine utilization transcriptional regulator
RA	6,087,358	T→A	6.9%	L294M (TTG→ATG)	oruR →	ornithine utilization transcriptional regulator
RA	6,087,362	A→C	8.4%	Q295P (CAG→CCG)	oruR →	ornithine utilization transcriptional regulator
RA	6,104,759	T→C	8.1%	H567R (CAC→CGC)	PP_5355 ←	sodium/proton antiporter
RA	6,119,567	C→T	7.0%	A396A (GCG→GCA)	PP_5370 ←	oxidoreductase‑like protein
RA	6,126,947	T→A	9.1%	intergenic (+38/+29)	PP_5374 → / ← PP_5375	choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator
RA	6,127,162	C→G	6.7%	V241V (GTG→GTC) ‡	PP_5375 ←	LysR family transcriptional regulator
RA	6,127,164	C→G	6.6%	V241L (GTG→CTG) ‡	PP_5375 ←	LysR family transcriptional regulator
RA	6,142,206	G→T	8.6%	E648* (GAA→TAA) ‡	cusA →	CzcA family RND family copper transporter
RA	6,142,207	A→T	8.6%	E648V (GAA→GTA) ‡	cusA →	CzcA family RND family copper transporter
RA	6,142,208	A→C	8.3%	E648D (GAA→GAC) ‡	cusA →	CzcA family RND family copper transporter
RA	6,158,983	C→G	7.0%	intergenic (+320/+548)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,984	T→A	7.0%	intergenic (+321/+547)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,985	C→G	6.9%	intergenic (+322/+546)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,174,702	G→T	6.5%	intergenic (‑64/+55)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,174,708	G→T	7.6%	intergenic (‑70/+49)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,174,709	A→C	7.1%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2837054	2837208	155	21 [20]	[20] 21	sad‑I/PP_2489	NAD+‑dependent succinate semialdehyde dehydrogenase/xenobiotic reductase

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 36650	61 (1.080)	4 (0.070)	4/248	NT	6.6%	coding (1003/1455 nt)	PP_0033	undecaprenyl‑glycosyl transferase
	?	NC_002947	= 36682	55 (1.010)					coding (971/1455 nt)	PP_0033	undecaprenyl‑glycosyl transferase
*	?	NC_002947	43823 =	46 (0.810)	3 (0.060)	3/240	NT	6.4%	coding (1702/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase
	?	NC_002947	43868 =	45 (0.860)					coding (1657/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase
*	?	NC_002947	= 64435	43 (0.760)	4 (0.070)	4/244	NT	9.4%	coding (281/888 nt)	PP_0055	transcriptional regulator
	?	NC_002947	= 64458	36 (0.670)					coding (258/888 nt)	PP_0055	transcriptional regulator
*	?	NC_002947	= 77147	60 (1.060)	5 (0.090)	5/250	NT	7.4%	coding (397/1311 nt)	rsmB	ribosomal RNA small subunit methyltransferase B
	?	NC_002947	= 77201	67 (1.220)					coding (343/1311 nt)	rsmB	ribosomal RNA small subunit methyltransferase B
*	?	NC_002947	= 99850	45 (0.800)	3 (0.060)	3/244	NT	6.8%	coding (559/651 nt)	PP_0094	5'‑nucleotidase
	?	NC_002947	= 99924	40 (0.750)					coding (485/651 nt)	PP_0094	5'‑nucleotidase
*	?	NC_002947	121613 =	80 (1.410)	5 (0.090)	4/248	NT	6.3%	coding (1559/2136 nt)	katE	hydroperoxidase
	?	NC_002947	121651 =	73 (1.340)					coding (1597/2136 nt)	katE	hydroperoxidase
*	?	NC_002947	= 123239	37 (0.650)	3 (0.050)	3/252	NT	7.1%	coding (629/783 nt)	znuB	zinc ABC transporter permease
	?	NC_002947	= 123282	42 (0.760)					coding (586/783 nt)	znuB	zinc ABC transporter permease
*	?	NC_002947	139294 =	53 (0.940)	3 (0.060)	3/248	NT	5.8%	coding (1210/1782 nt)	kinB	alginate biosynthesis sensor protein KinB
	?	NC_002947	139339 =	46 (0.850)					coding (1165/1782 nt)	kinB	alginate biosynthesis sensor protein KinB
*	?	NC_002947	152584 =	47 (0.830)	4 (0.070)	4/244	NT	8.2%	coding (1023/1407 nt)	PP_0144	insulinase family metalloprotease
	?	NC_002947	152653 =	45 (0.840)					coding (954/1407 nt)	PP_0144	insulinase family metalloprotease
*	?	NC_002947	= 158823	49 (0.870)	3 (0.060)	3/242	NT	5.2%	coding (1566/1956 nt)	PP_0149	hypothetical protein
	?	NC_002947	= 158900	64 (1.210)					coding (1489/1956 nt)	PP_0149	hypothetical protein
*	?	NC_002947	= 192172	51 (0.900)	5 (0.100)	4/240	NT	9.0%	coding (1346/2157 nt)	paxB	toxin secretion ATP‑binding protein
	?	NC_002947	= 192235	54 (1.030)					coding (1283/2157 nt)	paxB	toxin secretion ATP‑binding protein
*	?	NC_002947	214397 =	NA (NA)	4 (0.070)	4/258	NT	6.8%	coding (19903/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	217012 =	55 (0.970)					coding (22518/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	276776 =	49 (0.870)	3 (0.060)	3/244	NT	5.6%	coding (392/1221 nt)	PP_0223	DszC family monooxygenase
	?	NC_002947	276836 =	55 (1.030)					coding (332/1221 nt)	PP_0223	DszC family monooxygenase
*	?	NC_002947	= 277834	50 (0.880)	4 (0.070)	4/248	NT	7.4%	coding (672/1242 nt)	PP_0224	DszC family monooxygenase
	?	NC_002947	= 277859	52 (0.960)					coding (647/1242 nt)	PP_0224	DszC family monooxygenase
*	?	NC_002947	279835 =	49 (0.870)	4 (0.070)	4/248	NT	7.6%	coding (414/669 nt)	sctS	sulfur compound ABC transporter permease
	?	NC_002947	279908 =	50 (0.920)					coding (341/669 nt)	sctS	sulfur compound ABC transporter permease
*	?	NC_002947	= 323100	42 (0.740)	4 (0.070)	4/244	NT	9.9%	coding (1141/2070 nt)	PP_0267	ferric siderophore receptor
	?	NC_002947	= 323156	33 (0.620)					coding (1085/2070 nt)	PP_0267	ferric siderophore receptor
*	?	NC_002947	324733 =	63 (1.110)	6 (0.110)	6/244	NT	9.6%	coding (19/1320 nt)	oprQ	outer‑membrane porin D
	?	NC_002947	324772 =	54 (1.010)					coding (58/1320 nt)	oprQ	outer‑membrane porin D
*	?	NC_002947	328961 =	56 (0.990)	4 (0.080)	3/242	NT	6.3%	coding (289/1368 nt)	PP_0270	sensor histidine kinase
	?	NC_002947	329005 =	67 (1.260)					coding (245/1368 nt)	PP_0270	sensor histidine kinase
*	?	NC_002947	341556 =	55 (0.970)	4 (0.070)	4/250	NT	6.9%	coding (73/1386 nt)	gabP‑I	gamma‑aminobutyrate permease
	?	NC_002947	341643 =	54 (0.990)					coding (160/1386 nt)	gabP‑I	gamma‑aminobutyrate permease
*	?	NC_002947	= 400298	41 (0.730)	3 (0.050)	3/250	NT	9.0%	intergenic (+33/‑117)	PP_0333/PP_0334	hypothetical protein/transposase
	?	NC_002947	= 3967945	21 (0.380)					coding (73/1179 nt)	PP_3498	transposase
*	?	NC_002947	445618 =	68 (1.200)	7 (0.130)	5/248	NT	10.0%	coding (304/1806 nt)	PP_0368	acyl‑CoA dehydrogenase
	?	NC_002947	445651 =	60 (1.100)					coding (337/1806 nt)	PP_0368	acyl‑CoA dehydrogenase
*	?	NC_002947	487574 =	43 (0.760)	4 (0.070)	3/244	NT	9.3%	coding (728/990 nt)	pdxA	4‑hydroxythreonine‑4‑phosphate dehydrogenase
	?	NC_002947	487613 =	37 (0.690)					coding (689/990 nt)	pdxA	4‑hydroxythreonine‑4‑phosphate dehydrogenase
*	?	NC_002947	= 536944	55 (0.970)	3 (0.060)	3/244	NT	5.2%	coding (486/501 nt)	rplJ	50S ribosomal protein L10
	?	NC_002947	= 536969	58 (1.080)					intergenic (+10/‑68)	rplJ/rplL	50S ribosomal protein L10/50S ribosomal protein L7/L12
*	?	NC_002947	= 585464	51 (0.900)	4 (0.070)	4/246	NT	7.3%	coding (1307/1443 nt)	PP_0496	sodium/alanine symporter
	?	NC_002947	= 585496	53 (0.980)					coding (1275/1443 nt)	PP_0496	sodium/alanine symporter
*	?	NC_002947	= 597359	51 (0.900)	3 (0.050)	3/252	NT	5.0%	coding (87/582 nt)	PP_0508	hypothetical protein
	?	NC_002947	= 597399	64 (1.160)					coding (47/582 nt)	PP_0508	hypothetical protein
*	?	NC_002947	597840 =	55 (0.970)	4 (0.070)	4/246	NT	7.6%	coding (265/345 nt)	PP_0509	hypothetical protein
	?	NC_002947	597866 =	45 (0.830)					coding (291/345 nt)	PP_0509	hypothetical protein
*	?	NC_002947	611984 =	NA (NA)	4 (0.070)	4/250	NT	NA	coding (881/966 nt)	PP_0526	transposase
	?	NC_002947	612065 =	NA (NA)					coding (962/966 nt)	PP_0526	transposase
*	?	NC_002947	= 616014	45 (0.800)	3 (0.060)	3/248	NT	7.0%	coding (288/651 nt)	ribB	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase
	?	NC_002947	= 616042	37 (0.680)					coding (260/651 nt)	ribB	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase
*	?	NC_002947	646796 =	69 (1.220)	5 (0.090)	4/248	NT	6.9%	coding (419/1854 nt)	acoR	acetoin catabolism regulatory protein
	?	NC_002947	646817 =	69 (1.270)					coding (440/1854 nt)	acoR	acetoin catabolism regulatory protein
*	?	NC_002947	= 674330	46 (0.810)	3 (0.060)	3/240	NT	6.9%	intergenic (‑222/+84)	PP_0575/PP_0576	membrane protein/lipoprotein
	?	NC_002947	= 674353	38 (0.720)					intergenic (‑245/+61)	PP_0575/PP_0576	membrane protein/lipoprotein
*	?	NC_002947	707277 =	51 (0.900)	3 (0.060)	3/244	NT	6.2%	coding (72/279 nt)	rpsT	30S ribosomal protein S20
	?	NC_002947	707313 =	43 (0.800)					coding (36/279 nt)	rpsT	30S ribosomal protein S20
*	?	NC_002947	= 723492	66 (1.170)	4 (0.070)	4/248	NT	5.7%	coding (277/1020 nt)	PP_0617	branched‑chain amino acid ABC transporter permease
	?	NC_002947	= 723549	68 (1.250)					coding (220/1020 nt)	PP_0617	branched‑chain amino acid ABC transporter permease
*	?	NC_002947	738599 =	40 (0.710)	4 (0.080)	4/234	NT	11.4%	coding (817/867 nt)	pilD	leader peptidase/N‑methyltransferase
	?	NC_002947	738653 =	26 (0.510)					coding (763/867 nt)	pilD	leader peptidase/N‑methyltransferase
*	?	NC_002947	= 741869	NA (NA)	10 (0.190)	8/246	NT	NA	intergenic (+469/‑31)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741902	NA (NA)					coding (3/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 765795	39 (0.690)	3 (0.050)	3/250	NT	6.5%	coding (390/936 nt)	PP_0658	homocysteine S‑methyltransferase family protein
	?	NC_002947	= 765837	49 (0.890)					coding (432/936 nt)	PP_0658	homocysteine S‑methyltransferase family protein
*	?	NC_002947	= 769351	47 (0.830)	4 (0.080)	4/242	NT	9.2%	coding (1429/1440 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_002947	= 769381	35 (0.660)					intergenic (+19/‑27)	mmuP/PP_0661	S‑methyl‑L‑methionine transporter/transcriptional regulator AmpR
*	?	NC_002947	776702 =	44 (0.780)	3 (0.060)	3/242	NT	6.0%	coding (808/966 nt)	PP_0668	transmembrane sensor
	?	NC_002947	776792 =	53 (1.000)					coding (898/966 nt)	PP_0668	transmembrane sensor
*	?	NC_002947	785539 =	56 (0.990)	3 (0.050)	3/250	NT	5.5%	coding (387/3831 nt)	PP_0672	sensory box protein
	?	NC_002947	785585 =	49 (0.890)					coding (341/3831 nt)	PP_0672	sensory box protein
*	?	NC_002947	793981 =	51 (0.900)	4 (0.070)	4/246	NT	7.4%	coding (123/2439 nt)	PP_0680	ATP‑dependent protease‑like protein
	?	NC_002947	794035 =	52 (0.960)					coding (177/2439 nt)	PP_0680	ATP‑dependent protease‑like protein
*	?	NC_002947	809179 =	43 (0.760)	4 (0.070)	4/246	NT	9.0%	coding (179/1335 nt)	PP_0695	hypothetical protein
	?	NC_002947	809261 =	40 (0.740)					coding (97/1335 nt)	PP_0695	hypothetical protein
*	?	NC_002947	= 914212	41 (0.730)	4 (0.070)	4/246	NT	8.8%	coding (923/1743 nt)	fruA	PTS fructose transporter subunit IIBC
	?	NC_002947	= 914238	44 (0.820)					coding (949/1743 nt)	fruA	PTS fructose transporter subunit IIBC
*	?	NC_002947	= 989681	52 (0.920)	3 (0.060)	3/242	NT	5.4%	coding (204/642 nt)	PP_0855	hypothetical protein
	?	NC_002947	= 989705	56 (1.060)					coding (228/642 nt)	PP_0855	hypothetical protein
*	?	NC_002947	1007919 =	41 (0.730)	3 (0.060)	3/248	NT	6.2%	coding (829/1158 nt)	yehX	ABC transporter ATP‑binding protein
	?	NC_002947	1007980 =	51 (0.940)					coding (768/1158 nt)	yehX	ABC transporter ATP‑binding protein
*	?	NC_002947	= 1024432	42 (0.740)	4 (0.070)	4/250	NT	8.7%	coding (715/1380 nt)	opdP	glycine‑glutamate dipeptide porin
	?	NC_002947	= 1024441	43 (0.780)					coding (706/1380 nt)	opdP	glycine‑glutamate dipeptide porin
*	?	NC_002947	= 1035592	45 (0.800)	4 (0.070)	4/248	NT	8.2%	coding (429/588 nt)	PP_0893	ThiJ/PfpI family protein
	?	NC_002947	= 1035617	46 (0.850)					coding (454/588 nt)	PP_0893	ThiJ/PfpI family protein
*	?	NC_002947	1037771 =	41 (0.730)	3 (0.060)	3/212	NT	9.0%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037849 =	27 (0.580)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1068970	51 (0.900)	4 (0.070)	4/244	NT	7.0%	coding (132/1362 nt)	aroP‑I	aromatic amino acid transport protein
	?	NC_002947	= 1068997	58 (1.080)					coding (159/1362 nt)	aroP‑I	aromatic amino acid transport protein
*	?	NC_002947	= 1073094	49 (0.870)	4 (0.070)	4/246	NT	7.6%	coding (299/1446 nt)	gatB	aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit B
	?	NC_002947	= 1073186	50 (0.930)					coding (207/1446 nt)	gatB	aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit B
*	?	NC_002947	1083135 =	65 (1.150)	3 (0.060)	3/242	NT	5.0%	coding (2790/3822 nt)	PP_0938	hypothetical protein
	?	NC_002947	1083175 =	52 (0.980)					coding (2830/3822 nt)	PP_0938	hypothetical protein
*	?	NC_002947	= 1105875	57 (1.010)	3 (0.050)	3/250	NT	6.0%	coding (355/1326 nt)	hisD	histidinol dehydrogenase
	?	NC_002947	= 1105936	38 (0.690)					coding (416/1326 nt)	hisD	histidinol dehydrogenase
*	?	NC_002947	1114870 =	44 (0.780)	8 (0.180)	8/208	NT	20.9%	intergenic (‑64/+115)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	1114946 =	25 (0.550)					intergenic (‑140/+39)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1129335 =	37 (0.650)	4 (0.070)	4/248	NT	9.3%	coding (216/2856 nt)	gcvP‑I	glycine dehydrogenase
	?	NC_002947	1129374 =	42 (0.770)					coding (177/2856 nt)	gcvP‑I	glycine dehydrogenase
*	?	NC_002947	1152581 =	50 (0.880)	4 (0.070)	3/250	NT	8.0%	coding (1306/1827 nt)	edd	phosphogluconate dehydratase
	?	NC_002947	1152619 =	44 (0.800)					coding (1344/1827 nt)	edd	phosphogluconate dehydratase
*	?	NC_002947	1182996 =	69 (1.220)	4 (0.070)	4/244	NT	6.2%	coding (1389/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F
	?	NC_002947	1183033 =	56 (1.050)					coding (1352/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F
*	?	NC_002947	1214673 =	45 (0.800)	3 (0.060)	3/242	NT	5.8%	coding (2286/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1214749 =	55 (1.040)					coding (2210/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	1216043 =	51 (0.900)	3 (0.060)	3/248	NT	5.7%	coding (916/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1216078 =	51 (0.940)					coding (881/4305 nt)	PP_1061	ATP‑dependent DNA helicase
*	?	NC_002947	1273313 =	42 (0.740)	4 (0.080) +GCAGGCGACGCGGT	3/230	NT	8.5%	intergenic (+104/+64)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	3028128 =	54 (0.960)					intergenic (+2/‑220)	PP_2642/pcaY	GntR family transcriptional regulator/aromatic acid chemoreceptor
*	?	NC_002947	1294685 =	57 (1.010)	4 (0.070)	4/244	NT	7.0%	coding (166/465 nt)	slyB	outer membrane lipoprotein
	?	NC_002947	1294721 =	53 (0.990)					coding (202/465 nt)	slyB	outer membrane lipoprotein
*	?	NC_002947	= 1296790	NA (NA)	6 (0.110)	6/244	NT	NA	intergenic (‑543/‑23)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	= 1296814	NA (NA)					coding (2/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1333453	45 (0.800)	4 (0.070)	4/250	NT	9.1%	intergenic (+1034/‑222)	PP_1157/PP_1159	acetolactate synthase/membrane protein
	?	NC_002947	= 1333518	36 (0.660)					intergenic (+1099/‑157)	PP_1157/PP_1159	acetolactate synthase/membrane protein
*	?	NC_002947	1403673 =	54 (0.960)	4 (0.070)	4/246	NT	7.3%	coding (2009/2067 nt)	PP_1228	methyl‑accepting chemotaxis transducer
	?	NC_002947	1403710 =	50 (0.930)					coding (1972/2067 nt)	PP_1228	methyl‑accepting chemotaxis transducer
*	?	NC_002947	1408922 =	49 (0.870)	3 (0.060)	3/244	NT	6.0%	coding (1375/1509 nt)	PP_1230	hypothetical protein
	?	NC_002947	1408955 =	47 (0.880)					coding (1408/1509 nt)	PP_1230	hypothetical protein
*	?	NC_002947	1426800 =	NA (NA)	5 (0.090)	4/252	NT	NA	coding (698/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	1426860 =	NA (NA)					coding (758/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1444629	70 (1.240)	4 (0.070)	4/256	NT	5.8%	coding (253/1530 nt)	PP_1263	fusaric acid resistance protein
	?	NC_002947	= 1444674	60 (1.070)					coding (298/1530 nt)	PP_1263	fusaric acid resistance protein
*	?	NC_002947	1487006 =	30 (0.530)	4 (0.090)	4/198	NT	20.0%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487096 =	9 (0.210)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	1494006 =	39 (0.690)	4 (0.070)	4/246	NT	10.4%	coding (865/2277 nt)	PP_1306	Pyocin S‑type killer domain‑containing protein
	?	NC_002947	1494037 =	32 (0.590)					coding (834/2277 nt)	PP_1306	Pyocin S‑type killer domain‑containing protein
*	?	NC_002947	1499507 =	21 (0.370)	9 (0.180)	8/234	NT	19.8%	intergenic (+84/‑80)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 6060505	54 (1.050)					intergenic (+141/+40)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 1506411	41 (0.730)	4 (0.070)	4/248	NT	8.4%	coding (312/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit
	?	NC_002947	= 1506453	48 (0.880)					coding (354/780 nt)	petC	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit
*	?	NC_002947	= 1562830	54 (0.960)	3 (0.060)	3/238	NT	6.0%	coding (572/1476 nt)	PP_1372	hypothetical protein
	?	NC_002947	= 1562865	45 (0.860)					coding (607/1476 nt)	PP_1372	hypothetical protein
*	?	NC_002947	= 1593948	64 (1.130)	6 (0.110)	4/250	NT	9.3%	intergenic (‑146/+155)	PP_1399/kgtP	hypothetical protein/alpha‑ketoglutarate permease
	?	NC_002947	= 1593994	55 (1.000)					intergenic (‑192/+109)	PP_1399/kgtP	hypothetical protein/alpha‑ketoglutarate permease
*	?	NC_002947	1617057 =	41 (0.730)	3 (0.060)	3/248	NT	6.4%	coding (202/1515 nt)	PP_1416	tricarboxylate transport protein TctA
	?	NC_002947	1617095 =	49 (0.900)					coding (164/1515 nt)	PP_1416	tricarboxylate transport protein TctA
*	?	NC_002947	1617767 =	47 (0.830)	3 (0.060)	3/246	NT	7.2%	intergenic (‑22/+151)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
	?	NC_002947	1617805 =	32 (0.590)					intergenic (‑60/+113)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
*	?	NC_002947	= 1650266	50 (0.880)	3 (0.060)	3/244	NT	5.2%	coding (794/2043 nt)	PP_1446	TonB‑dependent receptor
	?	NC_002947	= 1650313	61 (1.140)					coding (747/2043 nt)	PP_1446	TonB‑dependent receptor
*	?	NC_002947	1695585 =	45 (0.800)	6 (0.110)	4/240	NT	13.1%	coding (262/648 nt)	PP_1491	CheW domain‑containing protein
	?	NC_002947	1695623 =	38 (0.720)					coding (300/648 nt)	PP_1491	CheW domain‑containing protein
*	?	NC_002947	= 1722035	50 (0.880)	3 (0.050)	3/250	NT	6.0%	coding (668/3066 nt)	PP_1517	RND family transporter
	?	NC_002947	= 1722076	46 (0.840)					coding (709/3066 nt)	PP_1517	RND family transporter
*	?	NC_002947	1745692 =	59 (1.040)	3 (0.060)	3/244	NT	5.4%	coding (69/546 nt)	PP_1543	hypothetical protein
	?	NC_002947	1745729 =	50 (0.940)					coding (32/546 nt)	PP_1543	hypothetical protein
*	?	NC_002947	= 1747697	49 (0.870)	4 (0.070)	4/246	NT	7.4%	intergenic (‑189/+342)	PP_5473/PP_5474	LuxR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 1747758	54 (1.000)					intergenic (‑250/+281)	PP_5473/PP_5474	LuxR family transcriptional regulator/hypothetical protein
*	?	NC_002947	1748689 =	52 (0.920)	5 (0.090)	5/246	NT	8.6%	intergenic (‑22/‑310)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	1748732 =	57 (1.060)					intergenic (‑65/‑267)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1764244	43 (0.760)	5 (0.090)	3/244	NT	11.0%	coding (152/735 nt)	PP_1573	major tail protein
	?	NC_002947	= 1764290	40 (0.750)					coding (198/735 nt)	PP_1573	major tail protein
*	?	NC_002947	1765380 =	54 (0.960)	3 (0.060)	3/244	NT	5.6%	coding (12/162 nt)	PP_1575	hypothetical protein
	?	NC_002947	1765426 =	50 (0.940)					coding (58/162 nt)	PP_1575	hypothetical protein
*	?	NC_002947	= 1815318	59 (1.040)	4 (0.070)	4/246	NT	6.9%	coding (236/1059 nt)	truD	tRNA pseudouridine(13) synthase TruD
	?	NC_002947	= 1815371	51 (0.950)					coding (289/1059 nt)	truD	tRNA pseudouridine(13) synthase TruD
*	?	NC_002947	1817932 =	37 (0.650)	4 (0.070)	4/246	NT	11.1%	coding (74/789 nt)	PP_1622	M23B subfamily metallopeptidase
	?	NC_002947	1817963 =	29 (0.540)					coding (105/789 nt)	PP_1622	M23B subfamily metallopeptidase
*	?	NC_002947	= 1821299	NA (NA)	4 (0.070)	3/244	NT	NA	coding (1062/1422 nt)	PP_1624	group II intron‑encoding maturase
	?	NC_002947	= 2070624	NA (NA)					coding (998/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	= 1825594	57 (1.010)	4 (0.070)	4/250	NT	6.9%	coding (181/1092 nt)	PP_1627	hypothetical protein
	?	NC_002947	= 1825621	53 (0.970)					coding (208/1092 nt)	PP_1627	hypothetical protein
*	?	NC_002947	1844134 =	0 (0.000)	56 (1.030)	48/248	NT	68.7%	coding (660/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 2179376	51 (0.940)					intergenic (+175/+93)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1844137	0 (0.000)	31 (0.570)	29/250	NT	49.2%	coding (657/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	2177702 =	64 (1.170)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
*	?	NC_002947	= 1856923	45 (0.800)	3 (0.060)	3/242	NT	7.0%	coding (102/2259 nt)	PP_1661	dehydrogenase
	?	NC_002947	= 1856949	38 (0.720)					coding (128/2259 nt)	PP_1661	dehydrogenase
*	?	NC_002947	= 1910312	34 (0.600)	3 (0.060)	3/244	NT	8.0%	coding (500/1341 nt)	PP_1710	phthalate permease family MFS transporter
	?	NC_002947	= 1910353	37 (0.690)					coding (459/1341 nt)	PP_1710	phthalate permease family MFS transporter
*	?	NC_002947	= 1921330	53 (0.940)	7 (0.130)	4/244	NT	11.9%	coding (768/963 nt)	PP_1720	alcohol dehydrogenase
	?	NC_002947	= 1921356	54 (1.010)					coding (794/963 nt)	PP_1720	alcohol dehydrogenase
*	?	NC_002947	= 1925584	58 (1.030)	6 (0.110)	5/244	NT	10.2%	coding (118/837 nt)	PP_1725	hypothetical protein
	?	NC_002947	= 1925632	51 (0.950)					coding (70/837 nt)	PP_1725	hypothetical protein
*	?	NC_002947	= 1930565	51 (0.900)	3 (0.060)	3/244	NT	5.6%	coding (1163/1290 nt)	apeB	M18 family aminopeptidase
	?	NC_002947	= 1930619	52 (0.970)					coding (1109/1290 nt)	apeB	M18 family aminopeptidase
*	?	NC_002947	1953718 =	52 (0.920)	3 (0.060)	3/248	NT	5.7%	coding (42/1494 nt)	PP_1752	hypothetical protein
	?	NC_002947	1953767 =	50 (0.920)					coding (91/1494 nt)	PP_1752	hypothetical protein
*	?	NC_002947	= 1959626	58 (1.030)	3 (0.060)	3/246	NT	5.9%	coding (409/525 nt)	PP_1756	hypothetical protein
	?	NC_002947	= 1959655	41 (0.760)					coding (438/525 nt)	PP_1756	hypothetical protein
*	?	NC_002947	1976704 =	67 (1.180)	4 (0.070)	4/248	NT	6.9%	coding (368/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase
	?	NC_002947	1976760 =	44 (0.810)					coding (424/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase
*	?	NC_002947	2050559 =	35 (0.620)	4 (0.100)	4/184	NT	20.0%	intergenic (‑52/+123)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	2050669 =	7 (0.170)					intergenic (‑162/+13)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2057823	18 (0.320)	4 (0.090)	3/210	NT	15.5%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2057863	29 (0.630)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	2079256 =	49 (0.870)	3 (0.060)	3/240	NT	6.8%	intergenic (‑55/‑75)	PP_1855/earP	hypothetical protein/EF‑P arginine 32 rhamnosyl‑transferase
	?	NC_002947	2079298 =	37 (0.700)					intergenic (‑97/‑33)	PP_1855/earP	hypothetical protein/EF‑P arginine 32 rhamnosyl‑transferase
*	?	NC_002947	2086243 =	NA (NA)	4 (0.080)	3/242	NT	NA	coding (358/1302 nt)	PP_1865	transposase
	?	NC_002947	2086305 =	NA (NA)					coding (420/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2099982	14 (0.250)	3 (0.060)	3/212	NT	17.9%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2100031	16 (0.340)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2114101	35 (0.620)	3 (0.060)	3/244	NT	7.8%	coding (185/4899 nt)	PP_1882	membrane protein
	?	NC_002947	= 2114117	38 (0.710)					coding (169/4899 nt)	PP_1882	membrane protein
*	?	NC_002947	2148590 =	46 (0.810)	5 (0.090)	5/246	NT	10.1%	coding (1930/3276 nt)	rne	ribonuclease E
	?	NC_002947	2148659 =	45 (0.830)					coding (1861/3276 nt)	rne	ribonuclease E
*	?	NC_002947	2155709 =	42 (0.740)	3 (0.060)	3/242	NT	6.4%	coding (151/1011 nt)	plsX	phosphate acyltransferase
	?	NC_002947	2155807 =	48 (0.910)					coding (249/1011 nt)	plsX	phosphate acyltransferase
*	?	NC_002947	2157010 =	42 (0.740)	4 (0.080)	4/242	NT	9.6%	coding (314/939 nt)	fabD	malonyl‑CoA‑ACP transacylase
	?	NC_002947	2157064 =	36 (0.680)					coding (368/939 nt)	fabD	malonyl‑CoA‑ACP transacylase
*	?	NC_002947	2172021 =	65 (1.150)	4 (0.070)	4/244	NT	6.3%	coding (408/561 nt)	PP_1924	phosphinothricin N‑acetyltransferase
	?	NC_002947	2172082 =	58 (1.080)					coding (347/561 nt)	PP_1924	phosphinothricin N‑acetyltransferase
*	?	NC_002947	= 2258059	NA (NA)	9 (0.170)	4/242	NT	22.0%	intergenic (+114/‑278)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2258152	34 (0.600)					intergenic (+207/‑185)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	= 2295510	77 (1.360)	8 (0.150)	7/248	NT	8.7%	intergenic (+55/‑68)	ppgL/PP_5496	L‑alpha‑hydroxyglutaric acid gamma‑lactonase/hypothetical protein
	?	NC_002947	= 2295563	94 (1.730)					intergenic (+108/‑15)	ppgL/PP_5496	L‑alpha‑hydroxyglutaric acid gamma‑lactonase/hypothetical protein
*	?	NC_002947	2301453 =	0 (0.000)	56 (1.010)	49/252	NT	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase
*	?	NC_002947	= 2301454	0 (0.000)	68 (1.220)	53/254	NT	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	2309177 =	75 (1.330)	5 (0.090)	4/246	NT	6.4%	coding (845/960 nt)	PP_2032	ATPase
	?	NC_002947	2309224 =	74 (1.370)					coding (798/960 nt)	PP_2032	ATPase
*	?	NC_002947	= 2315205	64 (1.130)	4 (0.070)	4/248	NT	5.9%	coding (747/783 nt)	PP_2037	aldolase
	?	NC_002947	= 2315229	67 (1.230)					coding (723/783 nt)	PP_2037	aldolase
*	?	NC_002947	2394741 =	84 (1.490)	6 (0.110)	5/244	NT	7.7%	coding (652/1413 nt)	dacB	D‑alanyl‑D‑alanine carboxypeptidase
	?	NC_002947	2394771 =	65 (1.220)					coding (622/1413 nt)	dacB	D‑alanyl‑D‑alanine carboxypeptidase
*	?	NC_002947	= 2396941	57 (1.010)	3 (0.060)	3/244	NT	5.3%	coding (2716/3636 nt)	PP_2100	two‑component system sensor protein
	?	NC_002947	= 2396980	53 (0.990)					coding (2677/3636 nt)	PP_2100	two‑component system sensor protein
*	?	NC_002947	2403799 =	54 (0.960)	4 (0.080)	4/238	NT	7.2%	coding (426/1209 nt)	PP_2106	ammonium transporter
	?	NC_002947	2403860 =	54 (1.040)					coding (487/1209 nt)	PP_2106	ammonium transporter
*	?	NC_002947	2427597 =	49 (0.870)	3 (0.060)	3/246	NT	6.2%	coding (131/513 nt)	PP_5503	CheA signal transduction histidine kinase
	?	NC_002947	2427641 =	44 (0.820)					coding (87/513 nt)	PP_5503	CheA signal transduction histidine kinase
*	?	NC_002947	2537390 =	54 (0.960)	3 (0.060)	3/248	NT	5.4%	coding (1649/2916 nt)	mrpAB	K(+)/H(+) antiporter subunit A/B
	?	NC_002947	2537433 =	53 (0.980)					coding (1606/2916 nt)	mrpAB	K(+)/H(+) antiporter subunit A/B
*	?	NC_002947	2542061 =	51 (0.900)	3 (0.060)	3/248	NT	5.5%	coding (595/993 nt)	PP_2234	AraC family transcriptional regulator
	?	NC_002947	2542124 =	54 (0.990)					coding (658/993 nt)	PP_2234	AraC family transcriptional regulator
*	?	NC_002947	2546228 =	52 (0.920)	4 (0.070)	4/244	NT	7.6%	coding (1329/1902 nt)	PP_2238	metallopeptidase
	?	NC_002947	2546260 =	48 (0.900)					coding (1361/1902 nt)	PP_2238	metallopeptidase
*	?	NC_002947	= 2590078	58 (1.030)	4 (0.070)	4/246	NT	6.2%	coding (125/681 nt)	PP_2267	single‑stranded DNA‑binding protein
	?	NC_002947	= 2590112	65 (1.210)					coding (159/681 nt)	PP_2267	single‑stranded DNA‑binding protein
*	?	NC_002947	2639540 =	50 (0.880)	4 (0.070)	4/248	NT	7.7%	coding (1117/1479 nt)	PP_2310	methyl‑accepting chemotaxis transducer
	?	NC_002947	2639589 =	48 (0.880)					coding (1068/1479 nt)	PP_2310	methyl‑accepting chemotaxis transducer
*	?	NC_002947	2642094 =	58 (1.030)	6 (0.110)	6/248	NT	9.7%	coding (357/1407 nt)	PP_2312	lytic transglycosylase family protein
	?	NC_002947	2642131 =	56 (1.030)					coding (394/1407 nt)	PP_2312	lytic transglycosylase family protein
*	?	NC_002947	2651703 =	43 (0.760)	4 (0.070)	4/246	NT	7.0%	coding (715/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
	?	NC_002947	2651786 =	65 (1.210)					coding (632/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
*	?	NC_002947	= 2684792	49 (0.870)	4 (0.080)	3/236	NT	7.5%	coding (91/243 nt)	PP_5520	hypothetical protein
	?	NC_002947	= 2684822	54 (1.040)					coding (61/243 nt)	PP_5520	hypothetical protein
*	?	NC_002947	2698379 =	38 (0.670)	3 (0.050)	3/250	NT	7.8%	intergenic (‑83/+59)	PP_2364/PP_2365	hypothetical protein/AraC family transcriptional regulator
	?	NC_002947	2698420 =	34 (0.620)					intergenic (‑124/+18)	PP_2364/PP_2365	hypothetical protein/AraC family transcriptional regulator
*	?	NC_002947	= 2727126	50 (0.880)	3 (0.050)	3/252	NT	5.2%	coding (196/627 nt)	PP_2388	LysE family transporter
	?	NC_002947	= 2727175	61 (1.100)					coding (147/627 nt)	PP_2388	LysE family transporter
*	?	NC_002947	= 2734791	57 (1.010)	4 (0.070)	4/246	NT	6.8%	coding (1689/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2734827	56 (1.040)					coding (1725/4422 nt)	PP_2394	leucine‑rich repeat‑containing protein
*	?	NC_002947	2766947 =	57 (1.010)	4 (0.070)	4/250	NT	6.4%	coding (1773/2187 nt)	PP_2420	ferric siderophore receptor
	?	NC_002947	2766974 =	61 (1.110)					coding (1746/2187 nt)	PP_2420	ferric siderophore receptor
*	?	NC_002947	= 2797832	57 (1.010)	4 (0.080)	4/240	NT	6.6%	coding (217/426 nt)	PP_2450	hypothetical protein
	?	NC_002947	= 2797872	60 (1.140)					coding (257/426 nt)	PP_2450	hypothetical protein
*	?	NC_002947	= 2799816	58 (1.030)	4 (0.070)	4/246	NT	6.9%	coding (475/1089 nt)	ansB	glutaminase‑asparaginase
	?	NC_002947	= 2799843	53 (0.980)					coding (448/1089 nt)	ansB	glutaminase‑asparaginase
*	?	NC_002947	= 2824669	50 (0.880)	4 (0.070)	4/244	NT	7.9%	coding (282/2193 nt)	PP_2478	isoquinoline 1‑oxidoreductase subunit beta
	?	NC_002947	= 2824719	46 (0.860)					coding (332/2193 nt)	PP_2478	isoquinoline 1‑oxidoreductase subunit beta
*	?	NC_002947	= 2942726	54 (0.960)	4 (0.070)	4/248	NT	6.9%	intergenic (‑527/‑846)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
	?	NC_002947	= 2942756	56 (1.030)					intergenic (‑557/‑816)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
*	?	NC_002947	= 2946810	39 (0.690)	3 (0.050)	3/250	NT	6.8%	coding (712/1755 nt)	yijP	phosphoethanolamine transferase CptA
	?	NC_002947	= 2946832	45 (0.820)					coding (690/1755 nt)	yijP	phosphoethanolamine transferase CptA
*	?	NC_002947	= 2957086	52 (0.920)	3 (0.060)	3/228	NT	6.2%	intergenic (+41/‑155)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	= 2957143	45 (0.900)					intergenic (+98/‑98)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	2982409 =	50 (0.880)	3 (0.060)	3/246	NT	5.8%	coding (770/810 nt)	PP_2608	shikimate dehydrogenase family protein
	?	NC_002947	2982442 =	49 (0.910)					coding (737/810 nt)	PP_2608	shikimate dehydrogenase family protein
*	?	NC_002947	2987370 =	NA (NA)	3 (0.060)	3/248	NT	NA	coding (1029/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2987422 =	NA (NA)					coding (977/2991 nt)	PP_2612	membrane protein
*	?	NC_002947	2987604 =	NA (NA)	4 (0.070)	4/244	NT	NA	coding (795/2991 nt)	PP_2612	membrane protein
	?	NC_002947	2987647 =	NA (NA)					coding (752/2991 nt)	PP_2612	membrane protein
*	?	NC_002947	2998471 =	49 (0.870)	3 (0.060)	3/238	NT	6.1%	coding (103/1767 nt)	PP_2621	hypothetical protein
	?	NC_002947	2998515 =	47 (0.900)					coding (59/1767 nt)	PP_2621	hypothetical protein
*	?	NC_002947	3117723 =	55 (0.970)	7 (0.130)	7/248	NT	12.6%	coding (859/1188 nt)	cfa	cyclopropane‑fatty‑acyl‑phospholipid synthase
	?	NC_002947	3117758 =	44 (0.810)					coding (824/1188 nt)	cfa	cyclopropane‑fatty‑acyl‑phospholipid synthase
*	?	NC_002947	= 3131512	69 (1.220)	4 (0.070)	4/252	NT	5.4%	coding (391/801 nt)	PP_2748	ABC transporter ATP‑binding protein
	?	NC_002947	= 3131556	74 (1.340)					coding (435/801 nt)	PP_2748	ABC transporter ATP‑binding protein
*	?	NC_002947	3146296 =	51 (0.900)	3 (0.060)	3/246	NT	6.1%	coding (719/987 nt)	PP_2761	ribose ABC transporter permease
	?	NC_002947	3146335 =	44 (0.820)					coding (758/987 nt)	PP_2761	ribose ABC transporter permease
*	?	NC_002947	3151100 =	53 (0.940)	4 (0.070)	4/244	NT	8.2%	coding (64/834 nt)	PP_2767	ABC transporter ATP‑binding protein
	?	NC_002947	3151150 =	40 (0.750)					coding (114/834 nt)	PP_2767	ABC transporter ATP‑binding protein
*	?	NC_002947	3166894 =	53 (0.940)	4 (0.070)	4/244	NT	7.9%	coding (31/1212 nt)	PP_2781	beta‑ketoacyl synthase
	?	NC_002947	3166948 =	43 (0.800)					coding (85/1212 nt)	PP_2781	beta‑ketoacyl synthase
*	?	NC_002947	= 3196654	62 (1.100)	3 (0.060)	3/246	NT	5.4%	coding (480/876 nt)	PP_2804	alpha/beta family hydrolase
	?	NC_002947	= 3196676	47 (0.870)					coding (458/876 nt)	PP_2804	alpha/beta family hydrolase
*	?	NC_002947	= 3213974	55 (0.970)	3 (0.060)	3/244	NT	5.4%	coding (1041/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC
	?	NC_002947	= 3214000	54 (1.010)					coding (1067/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC
*	?	NC_002947	= 3253088	59 (1.040)	5 (0.090)	4/242	NT	8.1%	coding (354/729 nt)	PP_2851	hypothetical protein
	?	NC_002947	= 3253135	58 (1.090)					coding (307/729 nt)	PP_2851	hypothetical protein
*	?	NC_002947	3279869 =	66 (1.170)	6 (0.110)	6/250	NT	9.8%	coding (211/594 nt)	PP_2879	hypothetical protein
	?	NC_002947	3279920 =	46 (0.840)					coding (160/594 nt)	PP_2879	hypothetical protein
*	?	NC_002947	3336525 =	70 (1.240)	4 (0.070)	4/246	NT	6.0%	coding (71/843 nt)	yghU	GSH‑dependent disulfide bond oxidoreductase
	?	NC_002947	3336564 =	59 (1.090)					coding (32/843 nt)	yghU	GSH‑dependent disulfide bond oxidoreductase
*	?	NC_002947	3363523 =	54 (0.960)	4 (0.070)	4/244	NT	7.5%	coding (61/822 nt)	PP_2960	transcriptional regulator, AraC family
	?	NC_002947	3363548 =	47 (0.880)					coding (86/822 nt)	PP_2960	transcriptional regulator, AraC family
*	?	NC_002947	= 3364670	65 (1.150)	5 (0.090)	5/248	NT	8.0%	coding (556/879 nt)	PP_2961	LysR family transcriptional regulator
	?	NC_002947	= 3364696	52 (0.960)					coding (530/879 nt)	PP_2961	LysR family transcriptional regulator
*	?	NC_002947	3377448 =	50 (0.880)	3 (0.060)	3/244	NT	5.7%	coding (568/906 nt)	tnpB	transposase subunit B
	?	NC_002947	3377486 =	52 (0.970)					coding (606/906 nt)	tnpB	transposase subunit B
*	?	NC_002947	= 3400459	58 (1.030)	3 (0.050)	3/250	NT	5.1%	coding (111/549 nt)	PP_3006	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	= 3400496	56 (1.020)					coding (74/549 nt)	PP_3006	ECF family RNA polymerase sigma‑70 factor
*	?	NC_002947	3424404 =	44 (0.780)	3 (0.060)	3/246	NT	6.1%	coding (355/363 nt)	PP_3039	hypothetical protein
	?	NC_002947	3424455 =	51 (0.950)					intergenic (+43/‑469)	PP_3039/PP_3040	hypothetical protein/holin
*	?	NC_002947	= 3440612	36 (0.640)	4 (0.070)	4/250	NT	10.4%	coding (355/510 nt)	PP_3060	tail sheath protein
	?	NC_002947	= 3440670	34 (0.620)					coding (413/510 nt)	PP_3060	tail sheath protein
*	?	NC_002947	= 3446122	56 (0.990)	3 (0.060)	3/248	NT	5.0%	coding (516/1044 nt)	gpD	tail formation
	?	NC_002947	= 3446145	60 (1.100)					coding (539/1044 nt)	gpD	tail formation
*	?	NC_002947	= 3463005	48 (0.850)	3 (0.060)	3/246	NT	6.7%	coding (1353/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
	?	NC_002947	= 3463061	38 (0.700)					coding (1297/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
*	?	NC_002947	3517942 =	56 (0.990)	3 (0.060)	3/246	NT	6.3%	coding (59/432 nt)	PP_3109	hypothetical protein
	?	NC_002947	3517985 =	36 (0.670)					coding (102/432 nt)	PP_3109	hypothetical protein
*	?	NC_002947	3522702 =	50 (0.880)	4 (0.080)	4/228	NT	9.4%	intergenic (+489/‑208)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	3522789 =	33 (0.660)					intergenic (+576/‑121)	PP_5584/PP_3113	hypothetical protein/transposase
*	?	NC_002947	3523512 =	NA (NA)	3 (0.060)	3/248	NT	NA	coding (225/1533 nt)	PP_3114	transposase
	?	NC_002947	3523555 =	NA (NA)					coding (268/1533 nt)	PP_3114	transposase
*	?	NC_002947	3547076 =	58 (1.030)	4 (0.070)	4/250	NT	6.7%	coding (21/1377 nt)	PP_3132	polysaccharide transporter
	?	NC_002947	3547143 =	56 (1.020)					coding (88/1377 nt)	PP_3132	polysaccharide transporter
*	?	NC_002947	3585486 =	48 (0.850)	4 (0.070)	3/250	NT	7.3%	coding (499/762 nt)	benD	1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
	?	NC_002947	3585528 =	55 (1.000)					coding (541/762 nt)	benD	1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
*	?	NC_002947	= 3588116	43 (0.760)	4 (0.080)	4/218	NT	8.7%	intergenic (+37/‑38)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	= 3588144	48 (1.000)					intergenic (+65/‑10)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
*	?	NC_002947	3631641 =	41 (0.730)	3 (0.050)	3/252	NT	7.4%	coding (535/1368 nt)	PP_5590	hypothetical protein
	?	NC_002947	3631699 =	35 (0.630)					coding (593/1368 nt)	PP_5590	hypothetical protein
*	?	NC_002947	3660340 =	46 (0.810)	3 (0.060)	3/248	NT	6.5%	coding (395/795 nt)	PP_3224	class II aldolase/adducin domain‑containing protein
	?	NC_002947	3660373 =	42 (0.770)					coding (362/795 nt)	PP_3224	class II aldolase/adducin domain‑containing protein
*	?	NC_002947	3691642 =	63 (1.110)	3 (0.060)	3/244	NT	5.3%	coding (177/600 nt)	PP_3257	putative Methyltransferase
	?	NC_002947	3691690 =	48 (0.900)					coding (129/600 nt)	PP_3257	putative Methyltransferase
*	?	NC_002947	= 3750698	51 (0.900)	6 (0.110)	5/250	NT	9.7%	coding (302/471 nt)	PP_3315	membrane protein
	?	NC_002947	= 3750761	62 (1.130)					coding (239/471 nt)	PP_3315	membrane protein
*	?	NC_002947	3758107 =	60 (1.060)	4 (0.080)	4/242	NT	6.6%	coding (420/1002 nt)	hemBB	porphobilinogen synthase
	?	NC_002947	3758145 =	57 (1.070)					coding (458/1002 nt)	hemBB	porphobilinogen synthase
*	?	NC_002947	= 3782604	50 (0.880)	3 (0.060)	3/242	NT	5.8%	coding (541/846 nt)	nikC	nickel ABC transporter permease
	?	NC_002947	= 3782647	51 (0.960)					coding (584/846 nt)	nikC	nickel ABC transporter permease
*	?	NC_002947	3783024 =	62 (1.100)	4 (0.080)	4/238	NT	6.8%	coding (115/771 nt)	nikD	nickel ABC transporter ATP‑binding protein
	?	NC_002947	3783131 =	53 (1.020)					coding (222/771 nt)	nikD	nickel ABC transporter ATP‑binding protein
*	?	NC_002947	3796316 =	58 (1.030)	4 (0.070)	4/246	NT	6.9%	coding (138/1884 nt)	fcs	feruloyl‑CoA‑synthetase
	?	NC_002947	3796400 =	52 (0.960)					coding (54/1884 nt)	fcs	feruloyl‑CoA‑synthetase
*	?	NC_002947	3849459 =	29 (0.510)	4 (0.070)	4/250	NT	11.6%	coding (1224/2268 nt)	PP_3397	hypothetical protein
	?	NC_002947	3849493 =	33 (0.600)					coding (1258/2268 nt)	PP_3397	hypothetical protein
*	?	NC_002947	3849545 =	41 (0.730)	3 (0.060)	3/246	NT	7.3%	coding (1310/2268 nt)	PP_3397	hypothetical protein
	?	NC_002947	3849579 =	37 (0.690)					coding (1344/2268 nt)	PP_3397	hypothetical protein
*	?	NC_002947	= 3879438	54 (0.960)	4 (0.070)	4/244	NT	7.3%	coding (1273/3180 nt)	mexF	multidrug RND transporter MexF
	?	NC_002947	= 3879489	51 (0.950)					coding (1324/3180 nt)	mexF	multidrug RND transporter MexF
*	?	NC_002947	3903215 =	29 (0.510)	3 (0.060)	3/246	NT	9.1%	coding (1528/1593 nt)	ilvA‑I	threonine deaminase
	?	NC_002947	3903252 =	32 (0.590)					coding (1491/1593 nt)	ilvA‑I	threonine deaminase
*	?	NC_002947	= 3907111	45 (0.800)	4 (0.070)	4/246	NT	8.2%	coding (1596/2175 nt)	nfrB	bacteriophage N4 receptor inner membrane subunit
	?	NC_002947	= 3907129	47 (0.870)					coding (1614/2175 nt)	nfrB	bacteriophage N4 receptor inner membrane subunit
*	?	NC_002947	3928339 =	36 (0.640)	9 (0.180)	8/224	NT	23.0%	intergenic (+15/‑125)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
	?	NC_002947	3928420 =	29 (0.590)					intergenic (+96/‑44)	peaE/PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
*	?	NC_002947	3931751 =	53 (0.940)	3 (0.060)	3/246	NT	5.9%	coding (27/678 nt)	PP_5604	subtilisin‑like serine protease
	?	NC_002947	3931845 =	45 (0.830)					coding (1632/1710 nt)	PP_3466	ABC transporter permease/ATP‑binding protein
*	?	NC_002947	3969585 =	NA (NA)	3 (0.060)	3/244	NT	NA	coding (220/321 nt)	PP_3499	transposase
	?	NC_002947	3969623 =	NA (NA)					coding (258/321 nt)	PP_3499	transposase
*	?	NC_002947	3974302 =	41 (0.730)	5 (0.090)	5/246	NT	10.1%	coding (171/1326 nt)	PP_3503	sigma‑54 dependent transcriptional regulator
	?	NC_002947	3974339 =	50 (0.930)					coding (134/1326 nt)	PP_3503	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	3978305 =	54 (0.960)	4 (0.070)	4/248	NT	7.2%	coding (2326/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN
	?	NC_002947	3978335 =	51 (0.940)					coding (2296/3762 nt)	cobN	aerobic cobaltochelatase subunit CobN
*	?	NC_002947	3988794 =	61 (1.080)	5 (0.090)	5/250	NT	8.1%	coding (1312/2085 nt)	oplA	5‑oxoprolinase A
	?	NC_002947	3988848 =	55 (1.000)					coding (1366/2085 nt)	oplA	5‑oxoprolinase A
*	?	NC_002947	4028796 =	50 (0.880)	4 (0.070)	4/250	NT	7.8%	coding (174/1623 nt)	PP_3553	AMP‑binding domain‑containing protein
	?	NC_002947	4028828 =	46 (0.840)					coding (206/1623 nt)	PP_3553	AMP‑binding domain‑containing protein
*	?	NC_002947	= 4059125	49 (0.870)	3 (0.060)	3/246	NT	5.8%	coding (58/513 nt)	fecI	RNA polymerase sigma 19 factor
	?	NC_002947	= 4059167	50 (0.930)					coding (16/513 nt)	fecI	RNA polymerase sigma 19 factor
*	?	NC_002947	= 4117855	43 (0.760)	5 (0.090)	5/244	NT	11.3%	coding (545/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta
	?	NC_002947	= 4117881	38 (0.710)					coding (571/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta
*	?	NC_002947	= 4119614	43 (0.760)	3 (0.050)	3/252	NT	6.5%	coding (30/1344 nt)	adhB	alcohol dehydrogenase cytochrome c subunit
	?	NC_002947	= 4119653	44 (0.800)					coding (69/1344 nt)	adhB	alcohol dehydrogenase cytochrome c subunit
*	?	NC_002947	= 4146460	49 (0.870)	4 (0.080)	4/242	NT	7.0%	coding (543/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4146507	61 (1.150)					coding (590/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	4157696 =	43 (0.760)	3 (0.050)	3/258	NT	6.1%	coding (183/888 nt)	PP_3660	LysR family transcriptional regulator
	?	NC_002947	4157729 =	49 (0.870)					coding (150/888 nt)	PP_3660	LysR family transcriptional regulator
*	?	NC_002947	= 4218215	62 (1.100)	3 (0.060)	3/242	NT	5.1%	coding (1082/1500 nt)	PP_3698	hypothetical protein
	?	NC_002947	= 4218256	53 (1.000)					coding (1041/1500 nt)	PP_3698	hypothetical protein
*	?	NC_002947	4249328 =	56 (0.990)	3 (0.060)	3/246	NT	5.3%	coding (699/2118 nt)	PP_3724	acyl‑CoA synthetase
	?	NC_002947	4249377 =	53 (0.980)					coding (650/2118 nt)	PP_3724	acyl‑CoA synthetase
*	?	NC_002947	4249662 =	43 (0.760)	4 (0.070)	3/246	NT	10.3%	coding (365/2118 nt)	PP_3724	acyl‑CoA synthetase
	?	NC_002947	4249723 =	29 (0.540)					coding (304/2118 nt)	PP_3724	acyl‑CoA synthetase
*	?	NC_002947	4343913 =	53 (0.940)	6 (0.110)	5/242	NT	10.6%	coding (793/1149 nt)	PP_3817	polyamine ABC transporter ATP‑binding protein
	?	NC_002947	4343952 =	52 (0.980)					coding (832/1149 nt)	PP_3817	polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	= 4397566	48 (0.850)	4 (0.070)	4/252	NT	7.3%	coding (3/327 nt) coding (1291/1314 nt)	PP_3876 PP_3877	hypothetical protein hypothetical protein
	?	NC_002947	= 4397608	54 (0.980)					coding (1249/1314 nt)	PP_3877	hypothetical protein
*	?	NC_002947	= 4405846	49 (0.870)	3 (0.050)	3/250	NT	6.0%	coding (370/672 nt)	PP_3887	hypothetical protein
	?	NC_002947	= 4405881	47 (0.860)					coding (335/672 nt)	PP_3887	hypothetical protein
*	?	NC_002947	4408984 =	36 (0.640)	4 (0.080)	4/236	NT	9.6%	coding (1330/1398 nt)	PP_3893	DNA helicase
	?	NC_002947	4409058 =	42 (0.810)					coding (1256/1398 nt)	PP_3893	DNA helicase
*	?	NC_002947	4424715 =	39 (0.690)	3 (0.060)	3/238	NT	7.4%	coding (228/273 nt)	PP_5647	hypothetical protein
	?	NC_002947	4424753 =	39 (0.750)					coding (190/273 nt)	PP_5647	hypothetical protein
*	?	NC_002947	4436276 =	41 (0.730)	3 (0.060)	3/246	NT	7.1%	coding (1403/1830 nt)	yfbS	putative transporter
	?	NC_002947	4436316 =	40 (0.740)					coding (1443/1830 nt)	yfbS	putative transporter
*	?	NC_002947	4529742 =	57 (1.010)	3 (0.060)	3/248	NT	5.4%	coding (177/429 nt)	PP_4018	acetyltransferase
	?	NC_002947	4529777 =	51 (0.940)					coding (212/429 nt)	PP_4018	acetyltransferase
*	?	NC_002947	4537518 =	NA (NA)	4 (0.070)	4/248	NT	100%	coding (853/1533 nt)	PP_4025	transposase
	?	NC_002947	4537544 =	0 (0.000)					coding (879/1533 nt)	PP_4025	transposase
*	?	NC_002947	= 4575531	23 (0.410)	4 (0.080)	4/238	NT	15.6%	intergenic (+49/‑73)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
	?	NC_002947	= 4575558	22 (0.420)					intergenic (+76/‑46)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
*	?	NC_002947	4577817 =	43 (0.760)	3 (0.060)	3/248	NT	6.4%	intergenic (+26/+83)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	4577869 =	47 (0.860)					intergenic (+78/+31)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	= 4613999	32 (0.570)	3 (0.060)	3/244	NT	8.8%	coding (370/4593 nt)	PP_4085	rhs family protein
	?	NC_002947	= 4614032	32 (0.600)					coding (403/4593 nt)	PP_4085	rhs family protein
*	?	NC_002947	= 4637861	45 (0.800)	3 (0.050)	3/250	NT	6.3%	coding (577/1617 nt)	PP_4103	low‑affinity inorganic phosphate transporter
	?	NC_002947	= 4637911	45 (0.820)					coding (627/1617 nt)	PP_4103	low‑affinity inorganic phosphate transporter
*	?	NC_002947	= 4647595	11 (0.190)	7 (0.180)	6/180	NT	44.2%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647625	10 (0.250)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	4662937 =	69 (1.220)	6 (0.110)	4/244	NT	9.2%	coding (1801/2715 nt)	nuoG	NADH‑quinone oxidoreductase subunit G
	?	NC_002947	4663024 =	53 (0.990)					coding (1888/2715 nt)	nuoG	NADH‑quinone oxidoreductase subunit G
*	?	NC_002947	4670530 =	49 (0.870)	4 (0.070)	4/244	NT	8.1%	coding (862/1470 nt)	nuoN	NADH‑quinone oxidoreductase subunit N
	?	NC_002947	4670606 =	44 (0.820)					coding (938/1470 nt)	nuoN	NADH‑quinone oxidoreductase subunit N
*	?	NC_002947	4683095 =	44 (0.780)	3 (0.060)	3/246	NT	9.1%	coding (1385/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
	?	NC_002947	4683139 =	18 (0.330)					coding (1429/1431 nt)	mltD	membrane‑bound lytic murein transglycosylase D
*	?	NC_002947	= 4683186	28 (0.500)	4 (0.090)	4/214	NT	11.7%	intergenic (+45/‑176)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
	?	NC_002947	= 4683234	37 (0.790)					intergenic (+93/‑128)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
*	?	NC_002947	= 4711918	51 (0.900)	3 (0.060)	3/244	NT	5.3%	coding (150/2115 nt)	PP_4171	hypothetical protein
	?	NC_002947	= 4711939	58 (1.080)					coding (171/2115 nt)	PP_4171	hypothetical protein
*	?	NC_002947	4771453 =	56 (0.990)	3 (0.060)	3/242	NT	5.7%	coding (7814/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4771492 =	46 (0.870)					coding (7775/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4776426	42 (0.740)	3 (0.060)	3/248	NT	6.5%	coding (2841/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	= 4776460	46 (0.850)					coding (2807/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4787379	47 (0.830)	4 (0.070)	4/246	NT	7.5%	coding (6461/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	= 4787406	54 (1.000)					coding (6434/6525 nt)	pvdI	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4802485	45 (0.800)	5 (0.090)	5/242	NT	10.6%	coding (829/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
	?	NC_002947	= 4802518	42 (0.790)					coding (796/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
*	?	NC_002947	= 4818949	54 (0.960)	4 (0.080)	4/242	NT	7.3%	coding (12241/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	= 4818984	51 (0.960)					coding (12206/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4828828 =	49 (0.870)	5 (0.090)	5/246	NT	9.4%	coding (2362/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4828857 =	50 (0.930)					coding (2333/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4834125 =	35 (0.620)	4 (0.070)	4/254	NT	10.2%	intergenic (‑71/‑101)	PP_4246/PP_4247	substrate‑binding protein/exonuclease
	?	NC_002947	4834158 =	36 (0.650)					intergenic (‑104/‑68)	PP_4246/PP_4247	substrate‑binding protein/exonuclease
*	?	NC_002947	= 4860136	66 (1.170)	4 (0.080)	4/236	NT	6.0%	coding (914/2331 nt)	ligA	DNA ligase
	?	NC_002947	= 4860160	66 (1.280)					coding (890/2331 nt)	ligA	DNA ligase
*	?	NC_002947	= 4896398	23 (0.410)	9 (0.190)	8/216	NT	28.5%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4896445	26 (0.550)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	4901030 =	50 (0.880)	3 (0.060)	3/248	NT	6.6%	coding (494/1533 nt)	PP_4309	NCS1 family transporter
	?	NC_002947	4901076 =	37 (0.680)					coding (540/1533 nt)	PP_4309	NCS1 family transporter
*	?	NC_002947	= 4908005	32 (0.570)	8 (0.140)	6/254	NT	20.3%	coding (20/198 nt)	PP_4317	hypothetical protein
	?	NC_002947	= 4908082	NA (NA)					intergenic (‑58/‑224)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	4914034 =	52 (0.920)	3 (0.050)	3/252	NT	5.3%	coding (665/1989 nt)	ccmF	holocytochrome c synthetase
	?	NC_002947	4914078 =	56 (1.010)					coding (621/1989 nt)	ccmF	holocytochrome c synthetase
*	?	NC_002947	4930594 =	61 (1.080)	3 (0.060)	3/240	NT	5.2%	coding (379/789 nt)	cheZ	protein phosphatase CheZ
	?	NC_002947	4930639 =	53 (1.010)					coding (334/789 nt)	cheZ	protein phosphatase CheZ
*	?	NC_002947	= 4974970	41 (0.730)	3 (0.060)	3/246	NT	6.7%	coding (634/2043 nt)	flgK	flagellar hook‑associated protein FlgK
	?	NC_002947	= 4975025	45 (0.830)					coding (579/2043 nt)	flgK	flagellar hook‑associated protein FlgK
*	?	NC_002947	4996793 =	41 (0.730)	5 (0.090)	5/250	NT	11.7%	coding (1183/1380 nt)	lpdV	branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase
	?	NC_002947	4996829 =	36 (0.660)					coding (1219/1380 nt)	lpdV	branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase
*	?	NC_002947	5081136 =	50 (0.880)	3 (0.060)	3/246	NT	5.5%	coding (403/1236 nt)	lysC	aspartokinase
	?	NC_002947	5081200 =	55 (1.020)					coding (339/1236 nt)	lysC	aspartokinase
*	?	NC_002947	= 5122388	60 (1.060)	3 (0.060)	3/248	NT	5.4%	coding (362/981 nt)	PP_4508	AraC family transcriptional regulator
	?	NC_002947	= 5122425	48 (0.880)					coding (325/981 nt)	PP_4508	AraC family transcriptional regulator
*	?	NC_002947	5168982 =	68 (1.200)	4 (0.070)	4/248	NT	5.5%	coding (600/1365 nt)	PP_4547	glutamine synthetase
	?	NC_002947	5169018 =	72 (1.320)					coding (636/1365 nt)	PP_4547	glutamine synthetase
*	?	NC_002947	5175709 =	42 (0.740)	3 (0.060)	3/248	NT	5.8%	coding (512/945 nt)	PP_4551	alpha/beta family hydrolase
	?	NC_002947	5175751 =	57 (1.050)					coding (554/945 nt)	PP_4551	alpha/beta family hydrolase
*	?	NC_002947	5196383 =	57 (1.010)	4 (0.080)	3/238	NT	8.2%	coding (132/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	5196428 =	37 (0.710)					coding (87/690 nt)	ybgJ	allophanate hydrolase subunit 1
*	?	NC_002947	= 5199395	58 (1.030)	4 (0.070)	4/248	NT	6.6%	coding (682/912 nt)	PP_4579	LysR family transcriptional regulator
	?	NC_002947	= 5199429	57 (1.050)					coding (716/912 nt)	PP_4579	LysR family transcriptional regulator
*	?	NC_002947	5205778 =	51 (0.900)	4 (0.070)	4/246	NT	7.6%	coding (655/1209 nt)	PP_4586	hypothetical protein
	?	NC_002947	5205848 =	49 (0.910)					coding (585/1209 nt)	PP_4586	hypothetical protein
*	?	NC_002947	= 5256691	43 (0.760)	3 (0.060)	3/248	NT	6.8%	coding (185/342 nt)	PP_5703	type III effector protein HopJ
	?	NC_002947	= 5256717	41 (0.750)					coding (211/342 nt)	PP_5703	type III effector protein HopJ
*	?	NC_002947	5301090 =	52 (0.920)	3 (0.060)	3/246	NT	5.8%	coding (2683/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
	?	NC_002947	5301137 =	47 (0.870)					coding (2636/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
*	?	NC_002947	5339657 =	56 (0.990)	3 (0.060)	3/248	NT	5.4%	coding (885/1383 nt)	pcnB	poly(A) polymerase
	?	NC_002947	5339691 =	52 (0.960)					coding (919/1383 nt)	pcnB	poly(A) polymerase
*	?	NC_002947	5362551 =	55 (0.970)	3 (0.060)	3/242	NT	5.3%	coding (1215/1341 nt)	glmM	phosphoglucosamine mutase
	?	NC_002947	5362607 =	55 (1.040)					coding (1159/1341 nt)	glmM	phosphoglucosamine mutase
*	?	NC_002947	5414165 =	39 (0.690)	3 (0.060)	3/240	NT	7.9%	coding (5/2394 nt)	PP_4755	ferrichrome‑iron receptor
	?	NC_002947	5414243 =	34 (0.650)					intergenic (‑74/+142)	PP_4755/gabP‑V	ferrichrome‑iron receptor/gamma‑aminobutyrate permease
*	?	NC_002947	5439386 =	45 (0.800)	4 (0.080)	4/242	NT	8.0%	coding (1440/1464 nt)	amn	AMP nucleosidase
	?	NC_002947	5439432 =	50 (0.940)					coding (1394/1464 nt)	amn	AMP nucleosidase
*	?	NC_002947	5487773 =	55 (0.970)	3 (0.060)	3/244	NT	5.5%	coding (1102/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	5487844 =	52 (0.970)					coding (1173/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 5492310	61 (1.080)	4 (0.080)	3/240	NT	6.9%	intergenic (‑111/+8)	PP_5716/cobJ	hypothetical protein/precorrin‑3B C17‑methyltransferase
	?	NC_002947	= 5492336	52 (0.990)					coding (1680/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
*	?	NC_002947	= 5528599	43 (0.760)	4 (0.080)	4/242	NT	8.1%	coding (188/765 nt)	ydfG	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase
	?	NC_002947	= 5528622	51 (0.960)					coding (165/765 nt)	ydfG	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase
*	?	NC_002947	5545321 =	NA (NA)	32 (0.570)	30/254	NT	82.3%	intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	= 5621245	7 (0.120)					coding (19/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	= 5545666	NA (NA)	40 (0.720)	35/252	NT	85.4%	intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5621244 =	7 (0.120)					coding (20/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	5564019 =	49 (0.870)	3 (0.060)	3/246	NT	6.0%	coding (228/1302 nt)	hflX	GTPase HflX
	?	NC_002947	5564079 =	48 (0.890)					coding (168/1302 nt)	hflX	GTPase HflX
*	?	NC_002947	5570627 =	41 (0.730)	4 (0.080)	3/240	NT	10.2%	coding (314/1065 nt)	queG	epoxyqueuosine reductase
	?	NC_002947	5570670 =	32 (0.610)					coding (357/1065 nt)	queG	epoxyqueuosine reductase
*	?	NC_002947	5575127 =	52 (0.920)	5 (0.090)	5/246	NT	8.7%	coding (167/1041 nt)	motB	flagellar motor rotation protein
	?	NC_002947	5575189 =	55 (1.020)					coding (105/1041 nt)	motB	flagellar motor rotation protein
*	?	NC_002947	5585676 =	44 (0.780)	3 (0.060)	3/246	NT	6.9%	coding (56/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5585713 =	39 (0.720)					coding (19/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	5594092 =	38 (0.670)	4 (0.090)	4/202	NT	13.2%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594185 =	23 (0.520)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5601631	44 (0.780)	3 (0.060)	3/238	NT	7.6%	coding (1851/5418 nt)	PP_4924	subtilase family serine protease
	?	NC_002947	= 5601675	32 (0.610)					coding (1807/5418 nt)	PP_4924	subtilase family serine protease
*	?	NC_002947	= 5609523	47 (0.830)	6 (0.110)	5/246	NT	12.0%	coding (75/1272 nt)	waaA	3‑deoxy‑D‑manno‑octulosonic acid transferase
	?	NC_002947	= 5609542	43 (0.800)					coding (56/1272 nt)	waaA	3‑deoxy‑D‑manno‑octulosonic acid transferase
*	?	NC_002947	= 5636030	44 (0.780)	3 (0.060)	3/248	NT	6.4%	coding (398/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein
	?	NC_002947	= 5636069	45 (0.830)					coding (437/1803 nt)	PP_4948	acyl‑CoA dehydrogenase family protein
*	?	NC_002947	= 5663477	64 (1.130)	3 (0.060)	3/242	NT	5.0%	coding (251/1179 nt)	PP_4971	outer membrane‑bound lytic murein transglycolase A
	?	NC_002947	= 5663511	53 (1.000)					coding (285/1179 nt)	PP_4971	outer membrane‑bound lytic murein transglycolase A
*	?	NC_002947	5685154 =	59 (1.040)	3 (0.060)	3/246	NT	5.3%	coding (1739/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	NC_002947	5685206 =	50 (0.930)					coding (1687/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
*	?	NC_002947	5724935 =	46 (0.810)	4 (0.070)	3/244	NT	8.3%	coding (2031/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
	?	NC_002947	5725015 =	45 (0.840)					coding (1951/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
*	?	NC_002947	= 5786495	46 (0.810)	4 (0.090)	4/210	NT	8.7%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5786532	47 (1.020)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5817709 =	64 (1.130)	4 (0.080)	4/238	NT	6.9%	coding (245/1011 nt)	pilT	twitching motility protein
	?	NC_002947	5817767 =	49 (0.940)					coding (187/1011 nt)	pilT	twitching motility protein
*	?	NC_002947	= 5823616	59 (1.040)	4 (0.070)	4/250	NT	6.5%	coding (552/1176 nt)	yggW	coproporphyrinogen/heterocyclic compound oxidase
	?	NC_002947	= 5823651	58 (1.060)					coding (587/1176 nt)	yggW	coproporphyrinogen/heterocyclic compound oxidase
*	?	NC_002947	= 5830996	53 (0.940)	4 (0.080)	4/242	NT	7.0%	coding (1148/1485 nt)	ftsY	signal recognition particle protein translocation receptor GTPase
	?	NC_002947	= 5831043	57 (1.070)					coding (1101/1485 nt)	ftsY	signal recognition particle protein translocation receptor GTPase
*	?	NC_002947	= 5862919	49 (0.870)	4 (0.080)	4/238	NT	8.7%	intergenic (‑131/+100)	fbpC/PP_5138	ABC transporter ATP‑binding protein/LysR family transcriptional regulator
	?	NC_002947	= 5862993	39 (0.750)					intergenic (‑205/+26)	fbpC/PP_5138	ABC transporter ATP‑binding protein/LysR family transcriptional regulator
*	?	NC_002947	= 5908091	52 (0.920)	6 (0.120)	6/236	NT	10.6%	intergenic (‑125/+32)	spuE/spuD	spermidine/putrescine ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter substrate‑binding protein
	?	NC_002947	= 5908098	54 (1.040)					intergenic (‑132/+25)	spuE/spuD	spermidine/putrescine ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter substrate‑binding protein
*	?	NC_002947	5926821 =	38 (0.670)	3 (0.060)	3/242	NT	7.8%	coding (1074/1623 nt)	PP_5195	iron ABC transporter permease
	?	NC_002947	5926859 =	35 (0.660)					coding (1036/1623 nt)	PP_5195	iron ABC transporter permease
*	?	NC_002947	5980103 =	51 (0.900)	3 (0.060)	3/242	NT	6.1%	coding (748/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5980159 =	45 (0.850)					coding (804/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
*	?	NC_002947	= 5999299	52 (0.920)	4 (0.080)	4/242	NT	6.9%	intergenic (‑154/‑167)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
	?	NC_002947	= 5999384	59 (1.110)					intergenic (‑239/‑82)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
*	?	NC_002947	6133582 =	51 (0.900)	3 (0.060)	3/248	NT	5.6%	coding (271/2010 nt)	copA‑II	copper resistance protein A
	?	NC_002947	6133624 =	53 (0.980)					coding (229/2010 nt)	copA‑II	copper resistance protein A
*	?	NC_002947	= 6152840	58 (1.030)	6 (0.110)	5/242	NT	9.7%	coding (421/489 nt)	PP_5738	hypothetical protein
	?	NC_002947	= 6152866	57 (1.070)					coding (447/489 nt)	PP_5738	hypothetical protein